mm39_v1_chr1_-_45542442_45542442	8.78307	Hoxc13_Hoxd13	ENSMUST00000086430.5|Col5a2|ENSMUSG00000026042.17|collagen, type V, alpha 2
mm39_v1_chr9_+_92424276_92424325	7.06056	Hoxc13_Hoxd13	ENSMUST00000070522.14|Plod2|ENSMUSG00000032374.15|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	ENSMUST00000160359.2|Plod2|ENSMUSG00000032374.15|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm39_v1_chr4_+_134042423_134042437	6.17611	Hoxc13_Hoxd13	ENSMUST00000105875.8|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63	ENSMUST00000030638.7|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63
mm39_v1_chr15_-_101759212_101759229	5.87504	Hoxc13_Hoxd13	ENSMUST00000023790.5|Krt1|ENSMUSG00000046834.8|keratin 1
mm39_v1_chr6_-_52194440_52194485	5.73566	Hoxc13_Hoxd13	ENSMUST00000048715.9|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr4_-_133329479_133329479	5.59878	Hoxc13_Hoxd13	ENSMUST00000057311.4|Sfn|ENSMUSG00000047281.4|stratifin
mm39_v1_chr17_+_75485906_75485956	5.16327	Hoxc13_Hoxd13	ENSMUST00000112514.2|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr16_+_34815177_34815240	5.04216	Hoxc13_Hoxd13	ENSMUST00000231589.2|Mylk|ENSMUSG00000022836.12|myosin, light polypeptide kinase
mm39_v1_chr6_+_24528143_24528199	4.81863	Hoxc13_Hoxd13	ENSMUST00000031696.10|Asb15|ENSMUSG00000029685.16|ankyrin repeat and SOCS box-containing 15
mm39_v1_chr11_+_96177449_96177480	4.76934	Hoxc13_Hoxd13	ENSMUST00000049352.8|Hoxb7|ENSMUSG00000038721.9|homeobox B7
mm39_v1_chr17_+_75485791_75485820	4.65253	Hoxc13_Hoxd13	ENSMUST00000135447.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1	ENSMUST00000112516.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr6_-_52195663_52195696	4.19105	Hoxc13_Hoxd13	ENSMUST00000134367.4|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr3_+_79793237_79793309	4.162	Hoxc13_Hoxd13	ENSMUST00000029567.9|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr11_+_96214078_96214152	4.00489	Hoxc13_Hoxd13	ENSMUST00000093944.10|Hoxb3|ENSMUSG00000048763.12|homeobox B3
mm39_v1_chr2_+_74528071_74528097	3.97593	Hoxc13_Hoxd13	ENSMUST00000059272.10|Hoxd9|ENSMUSG00000043342.10|homeobox D9
mm39_v1_chr14_+_65903840_65903865	3.96824	Hoxc13_Hoxd13	ENSMUST00000022610.15|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr8_+_15107646_15107660	3.94408	Hoxc13_Hoxd13	ENSMUST00000033842.4|Myom2|ENSMUSG00000031461.5|myomesin 2
mm39_v1_chr10_+_70040483_70040500	3.74208	Hoxc13_Hoxd13	ENSMUST00000020090.8|Mrln|ENSMUSG00000019933.8|myoregulin
mm39_v1_chr7_-_30312246_30312305	3.68747	Hoxc13_Hoxd13	ENSMUST00000006476.6|Upk1a|ENSMUSG00000006313.6|uroplakin 1A
mm39_v1_chr10_+_56253418_56253434	3.44688	Hoxc13_Hoxd13	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr10_+_28544356_28544400	3.36995	Hoxc13_Hoxd13	ENSMUST00000060409.13|Themis|ENSMUSG00000049109.16|thymocyte selection associated	ENSMUST00000056097.11|Themis|ENSMUSG00000049109.16|thymocyte selection associated	ENSMUST00000105516.9|Themis|ENSMUSG00000049109.16|thymocyte selection associated
mm39_v1_chr5_+_17779273_17779291	2.90509	Hoxc13_Hoxd13	ENSMUST00000030568.14|Sema3c|ENSMUSG00000028780.14|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm39_v1_chr2_-_17465410_17465446	2.88685	Hoxc13_Hoxd13	ENSMUST00000145492.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr17_-_31363245_31363262	2.85818	Hoxc13_Hoxd13	ENSMUST00000024826.8|Tff2|ENSMUSG00000024028.8|trefoil factor 2 (spasmolytic protein 1)
mm39_v1_chr12_+_75355082_75355096	2.64251	Hoxc13_Hoxd13	ENSMUST00000118602.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000118966.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000055390.6|Rhoj|ENSMUSG00000046768.14|ras homolog family member J
mm39_v1_chr6_-_52194414_52194432	2.53789	Hoxc13_Hoxd13	ENSMUST00000140316.2|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr10_+_70040504_70040540	2.47501	Hoxc13_Hoxd13	ENSMUST00000190199.2|Mrln|ENSMUSG00000019933.8|myoregulin
mm39_v1_chr14_+_65903878_65903892	2.46405	Hoxc13_Hoxd13	ENSMUST00000069226.7|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr4_-_141553306_141553471	2.42078	Hoxc13_Hoxd13	ENSMUST00000102481.4|Cela2a|ENSMUSG00000058579.6|chymotrypsin-like elastase family, member 2A
mm39_v1_chr15_-_101833160_101833177	2.40991	Hoxc13_Hoxd13	ENSMUST00000023797.8|Krt4|ENSMUSG00000059668.7|keratin 4
mm39_v1_chr1_-_74163575_74163626	2.39062	Hoxc13_Hoxd13	ENSMUST00000169786.8|Tns1|ENSMUSG00000055322.17|tensin 1	ENSMUST00000212888.2|Tns1|ENSMUSG00000055322.17|tensin 1	ENSMUST00000191104.7|Tns1|ENSMUSG00000055322.17|tensin 1
mm39_v1_chr5_-_122639840_122639958	2.27905	Hoxc13_Hoxd13	ENSMUST00000177974.8|Atp2a2|ENSMUSG00000029467.16|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm39_v1_chr5_+_114284585_114284616	2.25046	Hoxc13_Hoxd13	ENSMUST00000102582.8|Acacb|ENSMUSG00000042010.17|acetyl-Coenzyme A carboxylase beta
mm39_v1_chr11_+_96085118_96085142	2.20916	Hoxc13_Hoxd13	ENSMUST00000062709.4|Hoxb13|ENSMUSG00000049604.4|homeobox B13
mm39_v1_chr3_+_126391046_126391076	2.12935	Hoxc13_Hoxd13	ENSMUST00000106401.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr7_+_28240262_28240340	2.01325	Hoxc13_Hoxd13	ENSMUST00000119180.4|Sycn|ENSMUSG00000084174.4|syncollin
mm39_v1_chr4_-_148584906_148584923	2.00509	Hoxc13_Hoxd13	ENSMUST00000030840.4|Angptl7|ENSMUSG00000028989.4|angiopoietin-like 7
mm39_v1_chr1_-_156766351_156766379	1.98823	Hoxc13_Hoxd13	ENSMUST00000189648.2|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr5_+_128677863_128677912	1.93009	Hoxc13_Hoxd13	ENSMUST00000117102.4|Fzd10|ENSMUSG00000081683.6|frizzled class receptor 10
mm39_v1_chr1_-_39844467_39844493	1.9032	Hoxc13_Hoxd13	ENSMUST00000171319.4|Gm3646|ENSMUSG00000091937.4|predicted gene 3646
mm39_v1_chr3_+_126390951_126390964	1.88254	Hoxc13_Hoxd13	ENSMUST00000171289.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr15_-_101441254_101441259	1.84962	Hoxc13_Hoxd13	ENSMUST00000023720.8|Krt84|ENSMUSG00000044294.9|keratin 84
mm39_v1_chr2_+_35022178_35022270	1.75363	Hoxc13_Hoxd13	ENSMUST00000113034.8|Cntrl|ENSMUSG00000057110.16|centriolin	ENSMUST00000113037.10|Cntrl|ENSMUSG00000057110.16|centriolin	ENSMUST00000150807.6|Cntrl|ENSMUSG00000057110.16|centriolin	ENSMUST00000113033.6|Cntrl|ENSMUSG00000057110.16|centriolin
mm39_v1_chr11_-_43492367_43492395	1.642	Hoxc13_Hoxd13	ENSMUST00000020672.5|Fabp6|ENSMUSG00000020405.5|fatty acid binding protein 6
mm39_v1_chr17_-_52133594_52133629	1.63059	Hoxc13_Hoxd13	ENSMUST00000129667.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1	ENSMUST00000169480.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1	ENSMUST00000148559.2|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr1_+_60948149_60948193	1.55892	Hoxc13_Hoxd13	ENSMUST00000027164.9|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr1_+_107289659_107289659	1.55392	Hoxc13_Hoxd13	ENSMUST00000027566.3|Serpinb11|ENSMUSG00000026327.9|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm39_v1_chr15_-_101482320_101482349	1.55283	Hoxc13_Hoxd13	ENSMUST00000042957.6|Krt75|ENSMUSG00000022986.6|keratin 75
mm39_v1_chr9_+_32607301_32607417	1.46212	Hoxc13_Hoxd13	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr2_+_138120401_138120451	1.43246	Hoxc13_Hoxd13	ENSMUST00000075410.5|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr13_-_19917092_19917125	1.38742	Hoxc13_Hoxd13	ENSMUST00000151029.3|Gpr141b|ENSMUSG00000047462.10|G protein-coupled receptor 141B
mm39_v1_chr1_+_72346572_72346609	1.31654	Hoxc13_Hoxd13	ENSMUST00000027379.10|Xrcc5|ENSMUSG00000026187.10|X-ray repair complementing defective repair in Chinese hamster cells 5
mm39_v1_chr11_-_99996452_99996471	1.30086	Hoxc13_Hoxd13	ENSMUST00000107416.3|Krt36|ENSMUSG00000020916.9|keratin 36
mm39_v1_chr19_-_7319157_7319195	1.2993	Hoxc13_Hoxd13	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr6_+_83063348_83063348	1.29611	Hoxc13_Hoxd13	ENSMUST00000041265.4|Lbx2|ENSMUSG00000034968.4|ladybird homeobox 2
mm39_v1_chr14_-_103584179_103584277	1.29377	Hoxc13_Hoxd13	ENSMUST00000159855.8|Mycbp2|ENSMUSG00000033004.17|MYC binding protein 2, E3 ubiquitin protein ligase
mm39_v1_chr8_-_70591746_70591782	1.2517	Hoxc13_Hoxd13	ENSMUST00000212320.2|Rfxank|ENSMUSG00000036120.11|regulatory factor X-associated ankyrin-containing protein
mm39_v1_chr9_-_77255069_77255092	1.15939	Hoxc13_Hoxd13	ENSMUST00000184848.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein	ENSMUST00000184415.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein
mm39_v1_chr6_-_24528012_24528033	1.14423	Hoxc13_Hoxd13	ENSMUST00000023851.9|Ndufa5|ENSMUSG00000023089.13|NADH:ubiquinone oxidoreductase subunit A5
mm39_v1_chr9_-_77255099_77255169	1.12162	Hoxc13_Hoxd13	ENSMUST00000184138.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein	ENSMUST00000184006.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein	ENSMUST00000185144.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein	ENSMUST00000034910.16|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein
mm39_v1_chr10_+_28544556_28544633	1.08944	Hoxc13_Hoxd13	ENSMUST00000161345.2|Themis|ENSMUSG00000049109.16|thymocyte selection associated
mm39_v1_chr15_+_78867241_78867320	1.07887	Hoxc13_Hoxd13	ENSMUST00000109687.9|Triobp|ENSMUSG00000033088.20|TRIO and F-actin binding protein	ENSMUST00000130663.10|Triobp|ENSMUSG00000033088.20|TRIO and F-actin binding protein
mm39_v1_chrX_+_162923474_162923614	1.03343	Hoxc13_Hoxd13	ENSMUST00000073973.11|Ace2|ENSMUSG00000015405.16|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm39_v1_chr1_-_156766381_156766423	1.02547	Hoxc13_Hoxd13	ENSMUST00000188656.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr1_-_171854818_171854880	1.02161	Hoxc13_Hoxd13	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr17_+_46961250_46961267	1.00804	Hoxc13_Hoxd13	ENSMUST00000043464.14|Cul7|ENSMUSG00000038545.14|cullin 7
mm39_v1_chrX_+_95498965_95499017	0.977492	Hoxc13_Hoxd13	ENSMUST00000033553.14|Heph|ENSMUSG00000031209.15|hephaestin
mm39_v1_chr2_-_73316053_73316114	0.957596	Hoxc13_Hoxd13	ENSMUST00000102680.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr13_-_40887444_40887467	0.925277	Hoxc13_Hoxd13	ENSMUST00000224665.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr5_+_92957231_92957295	0.923499	Hoxc13_Hoxd13	ENSMUST00000113054.9|Shroom3|ENSMUSG00000029381.17|shroom family member 3
mm39_v1_chr10_+_56253531_56253641	0.92118	Hoxc13_Hoxd13	ENSMUST00000220194.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000218834.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr4_-_136329953_136330071	0.916859	Hoxc13_Hoxd13	ENSMUST00000105847.8|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A	ENSMUST00000116273.9|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A
mm39_v1_chr15_+_98972850_98972886	0.888532	Hoxc13_Hoxd13	ENSMUST00000039665.8|Troap|ENSMUSG00000032783.10|trophinin associated protein
mm39_v1_chr4_-_63090355_63090376	0.862192	Hoxc13_Hoxd13	ENSMUST00000156618.9|Kif12|ENSMUSG00000028357.14|kinesin family member 12	ENSMUST00000030042.3|Kif12|ENSMUSG00000028357.14|kinesin family member 12
mm39_v1_chr11_-_88608958_88609022	0.86218	Hoxc13_Hoxd13	ENSMUST00000107908.2|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr5_-_86893645_86893674	0.850141	Hoxc13_Hoxd13	ENSMUST00000161306.2|Tmprss11e|ENSMUSG00000054537.9|transmembrane protease, serine 11e
mm39_v1_chr7_-_102408573_102408684	0.832807	Hoxc13_Hoxd13	ENSMUST00000210453.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000232246.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000239110.2|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000060187.15|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78	ENSMUST00000168007.3|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78
mm39_v1_chr6_+_71886030_71886060	0.829524	Hoxc13_Hoxd13	ENSMUST00000055296.11|Polr1a|ENSMUSG00000049553.12|polymerase (RNA) I polypeptide A
mm39_v1_chr15_-_101459092_101459102	0.806354	Hoxc13_Hoxd13	ENSMUST00000023713.10|Krt82|ENSMUSG00000049548.10|keratin 82
mm39_v1_chr9_+_5308828_5308873	0.791314	Hoxc13_Hoxd13	ENSMUST00000162846.8|Casp4|ENSMUSG00000033538.14|caspase 4, apoptosis-related cysteine peptidase	ENSMUST00000027012.14|Casp4|ENSMUSG00000033538.14|caspase 4, apoptosis-related cysteine peptidase
mm39_v1_chr3_-_88317601_88317656	0.784731	Hoxc13_Hoxd13	ENSMUST00000193338.6|Pmf1|ENSMUSG00000028066.16|polyamine-modulated factor 1	ENSMUST00000056370.13|Pmf1|ENSMUSG00000028066.16|polyamine-modulated factor 1
mm39_v1_chr14_+_32043944_32043999	0.773183	Hoxc13_Hoxd13	ENSMUST00000022480.8|Ogdhl|ENSMUSG00000021913.9|oxoglutarate dehydrogenase-like	ENSMUST00000228529.2|Ogdhl|ENSMUSG00000021913.9|oxoglutarate dehydrogenase-like
mm39_v1_chr9_+_110948492_110948516	0.732937	Hoxc13_Hoxd13	ENSMUST00000217341.3|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chr11_+_77107006_77107113	0.70213	Hoxc13_Hoxd13	ENSMUST00000156488.8|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2	ENSMUST00000037912.12|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2
mm39_v1_chr10_-_35587888_35587888	0.652181	Hoxc13_Hoxd13	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chr15_+_6552270_6552346	0.63595	Hoxc13_Hoxd13	ENSMUST00000226412.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr9_-_77255171_77255198	0.629046	Hoxc13_Hoxd13	ENSMUST00000185039.8|Mlip|ENSMUSG00000032355.17|muscular LMNA-interacting protein
mm39_v1_chr15_-_101336669_101336685	0.604005	Hoxc13_Hoxd13	ENSMUST00000081945.5|Krt87|ENSMUSG00000047641.9|keratin 87
mm39_v1_chr9_-_50571080_50571107	0.596912	Hoxc13_Hoxd13	ENSMUST00000034567.4|Dlat|ENSMUSG00000000168.11|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm39_v1_chr1_+_60948307_60948330	0.581513	Hoxc13_Hoxd13	ENSMUST00000097720.4|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr7_+_67297152_67297204	0.567369	Hoxc13_Hoxd13	ENSMUST00000032774.16|Ttc23|ENSMUSG00000030555.17|tetratricopeptide repeat domain 23	ENSMUST00000107471.8|Ttc23|ENSMUSG00000030555.17|tetratricopeptide repeat domain 23
mm39_v1_chr15_-_78947038_78947142	0.556868	Hoxc13_Hoxd13	ENSMUST00000151889.8|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54	ENSMUST00000040676.11|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54
mm39_v1_chr10_+_127851031_127851043	0.550739	Hoxc13_Hoxd13	ENSMUST00000178041.8|Prim1|ENSMUSG00000025395.15|DNA primase, p49 subunit	ENSMUST00000026461.8|Prim1|ENSMUSG00000025395.15|DNA primase, p49 subunit
mm39_v1_chr4_-_82768958_82769051	0.539151	Hoxc13_Hoxd13	ENSMUST00000139401.2|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr1_+_85538554_85538592	0.522208	Hoxc13_Hoxd13	ENSMUST00000162925.2|Sp140|ENSMUSG00000070031.12|Sp140 nuclear body protein
mm39_v1_chr11_-_100510992_100511036	0.486864	Hoxc13_Hoxd13	ENSMUST00000014339.15|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239490.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239410.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7
mm39_v1_chr2_+_112096154_112096204	0.472907	Hoxc13_Hoxd13	ENSMUST00000110991.9|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6
mm39_v1_chr3_-_49711706_49711758	0.469554	Hoxc13_Hoxd13	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr11_-_99877423_99877434	0.467946	Hoxc13_Hoxd13	ENSMUST00000105050.4|Krtap16-1|ENSMUSG00000078253.4|keratin associated protein 16-1
mm39_v1_chr17_+_37274714_37274729	0.44054	Hoxc13_Hoxd13	ENSMUST00000209623.2|Polr1has|ENSMUSG00000036214.15|RNA polymerase I subunit H, antisense
mm39_v1_chr10_-_107321938_107321995	0.434738	Hoxc13_Hoxd13	ENSMUST00000000445.2|Myf5|ENSMUSG00000000435.2|myogenic factor 5
mm39_v1_chr1_+_53352780_53352841	0.427372	Hoxc13_Hoxd13	ENSMUST00000027265.10|Osgepl1|ENSMUSG00000026096.15|O-sialoglycoprotein endopeptidase-like 1	ENSMUST00000114484.8|Osgepl1|ENSMUSG00000026096.15|O-sialoglycoprotein endopeptidase-like 1
mm39_v1_chr17_-_36149100_36149135	0.411427	Hoxc13_Hoxd13	ENSMUST00000134978.3|Tubb5|ENSMUSG00000001525.11|tubulin, beta 5 class I
mm39_v1_chr13_+_35843816_35843853	0.402507	Hoxc13_Hoxd13	ENSMUST00000075220.14|Cdyl|ENSMUSG00000059288.15|chromodomain protein, Y chromosome-like
mm39_v1_chr2_-_127634387_127634425	0.396248	Hoxc13_Hoxd13	ENSMUST00000135091.2|Mtln|ENSMUSG00000051319.7|mitoregulin
mm39_v1_chr8_-_70591799_70591812	0.389113	Hoxc13_Hoxd13	ENSMUST00000075724.9|Rfxank|ENSMUSG00000036120.11|regulatory factor X-associated ankyrin-containing protein
mm39_v1_chrX_-_7185424_7185527	0.380918	Hoxc13_Hoxd13	ENSMUST00000115746.8|Clcn5|ENSMUSG00000004317.15|chloride channel, voltage-sensitive 5
mm39_v1_chr19_-_7319211_7319228	0.379301	Hoxc13_Hoxd13	ENSMUST00000171393.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr18_-_46413886_46413908	0.358652	Hoxc13_Hoxd13	ENSMUST00000236999.2|Pggt1b|ENSMUSG00000024477.5|protein geranylgeranyltransferase type I, beta subunit
mm39_v1_chr13_-_21586858_21586925	0.318319	Hoxc13_Hoxd13	ENSMUST00000117721.8|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000070785.16|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116433.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000223831.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116434.11|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000224820.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3
mm39_v1_chr8_-_25528972_25528986	0.315661	Hoxc13_Hoxd13	ENSMUST00000084031.6|Htra4|ENSMUSG00000037406.8|HtrA serine peptidase 4
mm39_v1_chrX_-_7185529_7185624	0.313199	Hoxc13_Hoxd13	ENSMUST00000128319.2|Clcn5|ENSMUSG00000004317.15|chloride channel, voltage-sensitive 5
mm39_v1_chr17_+_35658131_35658171	0.311887	Hoxc13_Hoxd13	ENSMUST00000071951.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000116598.10|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000078205.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000076256.8|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7
mm39_v1_chr10_-_8394546_8394616	0.298455	Hoxc13_Hoxd13	ENSMUST00000061601.9|Ust|ENSMUSG00000047712.9|uronyl-2-sulfotransferase
mm39_v1_chr9_-_63929308_63929357	0.283318	Hoxc13_Hoxd13	ENSMUST00000179458.2|Smad6|ENSMUSG00000036867.8|SMAD family member 6	ENSMUST00000041029.6|Smad6|ENSMUSG00000036867.8|SMAD family member 6
mm39_v1_chr1_-_156766957_156767119	0.282498	Hoxc13_Hoxd13	ENSMUST00000171292.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000063199.13|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000027886.14|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr11_+_60066681_60066713	0.274182	Hoxc13_Hoxd13	ENSMUST00000102688.2|Rai1|ENSMUSG00000062115.16|retinoic acid induced 1
mm39_v1_chr7_-_28330322_28330492	0.267345	Hoxc13_Hoxd13	ENSMUST00000040112.5|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000239470.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr4_+_21879660_21879726	0.257783	Hoxc13_Hoxd13	ENSMUST00000029909.3|Coq3|ENSMUSG00000028247.3|coenzyme Q3 methyltransferase
mm39_v1_chr15_+_66542598_66542603	0.233042	Hoxc13_Hoxd13	ENSMUST00000065916.14|Tg|ENSMUSG00000053469.15|thyroglobulin
mm39_v1_chr1_+_83022653_83022653	0.232442	Hoxc13_Hoxd13	ENSMUST00000222567.2|Gm47969|ENSMUSG00000113267.2|predicted gene, 47969
mm39_v1_chr3_+_88528410_88528438	0.223973	Hoxc13_Hoxd13	ENSMUST00000029694.14|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2	ENSMUST00000176804.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chrX_+_41241049_41241072	0.222476	Hoxc13_Hoxd13	ENSMUST00000128799.3|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr8_+_96058907_96058970	0.216052	Hoxc13_Hoxd13	ENSMUST00000034245.16|Usb1|ENSMUSG00000031792.16|U6 snRNA biogenesis 1
mm39_v1_chr18_+_44249254_44249330	0.169298	Hoxc13_Hoxd13	ENSMUST00000212114.2|Gm37797|ENSMUSG00000110628.2|predicted gene, 37797
mm39_v1_chr2_+_20727274_20727436	0.151806	Hoxc13_Hoxd13	ENSMUST00000114607.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr7_-_28329924_28329993	0.147527	Hoxc13_Hoxd13	ENSMUST00000159095.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159418.8|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159560.3|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr18_+_69478893_69478922	0.145414	Hoxc13_Hoxd13	ENSMUST00000202354.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr8_+_105991280_105991330	0.14373	Hoxc13_Hoxd13	ENSMUST00000036221.12|Fbxl8|ENSMUSG00000033313.12|F-box and leucine-rich repeat protein 8
mm39_v1_chr11_-_23845207_23845280	0.112363	Hoxc13_Hoxd13	ENSMUST00000102863.3|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma	ENSMUST00000020513.10|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma
mm39_v1_chr17_-_36149142_36149198	0.111936	Hoxc13_Hoxd13	ENSMUST00000001566.10|Tubb5|ENSMUSG00000001525.11|tubulin, beta 5 class I
mm39_v1_chr3_+_102642516_102642554	0.104765	Hoxc13_Hoxd13	ENSMUST00000119902.6|Tspan2|ENSMUSG00000027858.14|tetraspanin 2
mm39_v1_chr15_-_79658608_79658673	0.104172	Hoxc13_Hoxd13	ENSMUST00000229644.2|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4	ENSMUST00000023055.8|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4
mm39_v1_chr9_-_96601574_96601618	0.0966705	Hoxc13_Hoxd13	ENSMUST00000128269.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr15_-_79658584_79658603	0.0915804	Hoxc13_Hoxd13	ENSMUST00000069877.12|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4
mm39_v1_chr9_+_38119661_38119661	0.0857928	Hoxc13_Hoxd13	ENSMUST00000211975.3|Olfr893|ENSMUSG00000093901.4|olfactory receptor 893
mm39_v1_chr3_-_75359125_75359125	0.0832798	Hoxc13_Hoxd13	ENSMUST00000204341.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chrX_+_7750558_7750617	0.0804262	Hoxc13_Hoxd13	ENSMUST00000208640.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000207114.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000208633.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000208397.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000153620.3|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000123277.8|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2
mm39_v1_chr4_-_44710408_44710487	0.073275	Hoxc13_Hoxd13	ENSMUST00000134968.9|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000173821.8|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000174319.8|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000173733.8|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000172866.8|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000165417.9|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000107825.9|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000102932.10|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000107827.9|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000107826.9|Pax5|ENSMUSG00000014030.16|paired box 5	ENSMUST00000014174.14|Pax5|ENSMUSG00000014030.16|paired box 5
mm39_v1_chr11_-_99433984_99434048	0.0684362	Hoxc13_Hoxd13	ENSMUST00000107443.8|Krt40|ENSMUSG00000059169.10|keratin 40	ENSMUST00000074253.4|Krt40|ENSMUSG00000059169.10|keratin 40
mm39_v1_chr18_+_36877709_36877813	0.0412815	Hoxc13_Hoxd13	ENSMUST00000007042.6|Ik|ENSMUSG00000024474.8|IK cytokine	ENSMUST00000237095.2|Ik|ENSMUSG00000024474.8|IK cytokine
mm39_v1_chr8_-_37200051_37200208	0.0230524	Hoxc13_Hoxd13	ENSMUST00000098826.10|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr7_-_130748035_130748051	0.0167106	Hoxc13_Hoxd13	ENSMUST00000070980.4|4933402N03Rik|ENSMUSG00000013668.10|RIKEN cDNA 4933402N03 gene
mm39_v1_chr9_-_110775143_110775226	0.0118538	Hoxc13_Hoxd13	ENSMUST00000199782.2|Tdgf1|ENSMUSG00000032494.13|teratocarcinoma-derived growth factor 1	ENSMUST00000035075.13|Tdgf1|ENSMUSG00000032494.13|teratocarcinoma-derived growth factor 1
mm39_v1_chr5_+_86952072_86952135	0.0117569	Hoxc13_Hoxd13	ENSMUST00000119339.8|Ythdc1|ENSMUSG00000035851.15|YTH domain containing 1	ENSMUST00000120498.8|Ythdc1|ENSMUSG00000035851.15|YTH domain containing 1
mm39_v1_chr18_-_84854841_84854841	0.00300605	Hoxc13_Hoxd13	ENSMUST00000236689.2|Gm17266|ENSMUSG00000117781.2|predicted gene, 17266
mm39_v1_chr5_+_150119860_150119931	0.00221577	Hoxc13_Hoxd13	ENSMUST00000202600.4|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr16_-_57051727_57051768	0.000872001	Hoxc13_Hoxd13	ENSMUST00000226586.2|Tbc1d23|ENSMUSG00000022749.9|TBC1 domain family, member 23
