mm39_v1_chr2_+_174292471_174292502	6.89268	Nkx2-2	ENSMUST00000016399.6|Tubb1|ENSMUSG00000016255.6|tubulin, beta 1 class VI
mm39_v1_chr1_-_173703424_173703430	5.39595	Nkx2-2	ENSMUST00000186442.7|Mndal|ENSMUSG00000090272.10|myeloid nuclear differentiation antigen like
mm39_v1_chr13_-_113237505_113237522	5.34095	Nkx2-2	ENSMUST00000224282.2|Gzma|ENSMUSG00000023132.9|granzyme A	ENSMUST00000023897.7|Gzma|ENSMUSG00000023132.9|granzyme A
mm39_v1_chr6_+_67873135_67873156	5.18391	Nkx2-2	ENSMUST00000103310.3|Igkv14-126|ENSMUSG00000094345.3|immunoglobulin kappa variable 14-126
mm39_v1_chr9_+_51124983_51125008	4.42031	Nkx2-2	ENSMUST00000034554.9|Pou2af1|ENSMUSG00000032053.9|POU domain, class 2, associating factor 1
mm39_v1_chr19_-_11243530_11243605	4.31608	Nkx2-2	ENSMUST00000169159.3|Ms4a1|ENSMUSG00000024673.10|membrane-spanning 4-domains, subfamily A, member 1
mm39_v1_chr6_-_41681273_41681285	4.09812	Nkx2-2	ENSMUST00000031899.14|Kel|ENSMUSG00000029866.14|Kell blood group
mm39_v1_chr17_+_18108102_18108150	4.08195	Nkx2-2	ENSMUST00000054871.12|Fpr3|ENSMUSG00000079700.8|formyl peptide receptor 3	ENSMUST00000064068.5|Fpr2|ENSMUSG00000052270.8|formyl peptide receptor 2
mm39_v1_chr1_-_73055043_73055068	3.94496	Nkx2-2	ENSMUST00000027374.7|Tnp1|ENSMUSG00000026182.7|transition protein 1
mm39_v1_chr10_-_117681864_117681940	3.94406	Nkx2-2	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr17_+_18108086_18108099	3.80681	Nkx2-2	ENSMUST00000149944.2|Fpr2|ENSMUSG00000052270.8|formyl peptide receptor 2
mm39_v1_chr2_-_58050494_58050507	3.68985	Nkx2-2	ENSMUST00000028175.7|Cytip|ENSMUSG00000026832.13|cytohesin 1 interacting protein
mm39_v1_chr6_-_136834725_136834747	3.61299	Nkx2-2	ENSMUST00000032341.3|Art4|ENSMUSG00000030217.3|ADP-ribosyltransferase 4
mm39_v1_chr6_+_68233361_68233373	3.49504	Nkx2-2	ENSMUST00000103320.3|Igkv14-111|ENSMUSG00000095771.3|immunoglobulin kappa variable 14-111
mm39_v1_chr6_+_65929546_65929605	3.38235	Nkx2-2	ENSMUST00000043382.9|4930544G11Rik|ENSMUSG00000036463.9|RIKEN cDNA 4930544G11 gene
mm39_v1_chr5_-_88675700_88675750	3.33479	Nkx2-2	ENSMUST00000087033.6|Jchain|ENSMUSG00000067149.7|immunoglobulin joining chain
mm39_v1_chr7_+_44485704_44485723	3.22102	Nkx2-2	ENSMUST00000033015.8|Il4i1|ENSMUSG00000074141.14|interleukin 4 induced 1
mm39_v1_chrX_+_106192510_106192569	3.18655	Nkx2-2	ENSMUST00000147521.8|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B	ENSMUST00000167673.2|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B
mm39_v1_chr10_+_87926932_87926939	3.17139	Nkx2-2	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr2_-_84605732_84605756	2.99641	Nkx2-2	ENSMUST00000023994.10|Serping1|ENSMUSG00000023224.13|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm39_v1_chr9_+_72345801_72345880	2.97835	Nkx2-2	ENSMUST00000184604.8|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1	ENSMUST00000034746.10|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1
mm39_v1_chr16_+_14523696_14523722	2.96469	Nkx2-2	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr11_-_79414542_79414588	2.94588	Nkx2-2	ENSMUST00000179322.2|Evi2b|ENSMUSG00000093938.3|ecotropic viral integration site 2b
mm39_v1_chr15_-_5093222_5093240	2.84875	Nkx2-2	ENSMUST00000110689.5|C7|ENSMUSG00000079105.5|complement component 7
mm39_v1_chr2_-_84605764_84605788	2.84173	Nkx2-2	ENSMUST00000111641.2|Serping1|ENSMUSG00000023224.13|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm39_v1_chr5_-_82271183_82271194	2.80139	Nkx2-2	ENSMUST00000186079.2|1700031L13Rik|ENSMUSG00000099863.2|RIKEN cDNA 1700031L13 gene	ENSMUST00000185607.2|1700031L13Rik|ENSMUSG00000099863.2|RIKEN cDNA 1700031L13 gene
mm39_v1_chr10_-_59277570_59277630	2.76552	Nkx2-2	ENSMUST00000009798.5|Oit3|ENSMUSG00000009654.5|oncoprotein induced transcript 3
mm39_v1_chr1_-_173426640_173426844	2.73383	Nkx2-2	ENSMUST00000150649.9|Ifi213|ENSMUSG00000073491.12|interferon activated gene 213	ENSMUST00000180215.2|Ifi213|ENSMUSG00000073491.12|interferon activated gene 213	ENSMUST00000097462.9|Ifi213|ENSMUSG00000073491.12|interferon activated gene 213
mm39_v1_chr8_-_79975199_79975209	2.70277	Nkx2-2	ENSMUST00000034109.6|1700011L22Rik|ENSMUSG00000031682.6|RIKEN cDNA 1700011L22 gene
mm39_v1_chr12_-_112824506_112824588	2.65474	Nkx2-2	ENSMUST00000021729.9|Gpr132|ENSMUSG00000021298.9|G protein-coupled receptor 132
mm39_v1_chr2_-_83771564_83771577	2.64852	Nkx2-2	ENSMUST00000038223.8|Zswim2|ENSMUSG00000034552.9|zinc finger SWIM-type containing 2	ENSMUST00000152829.2|Zswim2|ENSMUSG00000034552.9|zinc finger SWIM-type containing 2
mm39_v1_chr1_-_85664246_85664357	2.6425	Nkx2-2	ENSMUST00000064788.14|A630001G21Rik|ENSMUSG00000052760.17|RIKEN cDNA A630001G21 gene
mm39_v1_chr8_-_25438784_25438846	2.60986	Nkx2-2	ENSMUST00000119720.8|Adam32|ENSMUSG00000037437.19|a disintegrin and metallopeptidase domain 32	ENSMUST00000121438.9|Adam32|ENSMUSG00000037437.19|a disintegrin and metallopeptidase domain 32
mm39_v1_chr6_-_23650205_23650271	2.43345	Nkx2-2	ENSMUST00000115354.2|Rnf133|ENSMUSG00000051956.5|ring finger protein 133
mm39_v1_chr11_+_96209093_96209093	2.41181	Nkx2-2	ENSMUST00000049241.9|Hoxb4|ENSMUSG00000038692.9|homeobox B4
mm39_v1_chr2_+_3705824_3705844	2.38891	Nkx2-2	ENSMUST00000115054.9|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr7_+_45067747_45067794	2.33207	Nkx2-2	ENSMUST00000238638.2|Lhb|ENSMUSG00000118462.2|luteinizing hormone beta
mm39_v1_chr8_-_3976808_3976837	2.32043	Nkx2-2	ENSMUST00000188386.2|Cd209b|ENSMUSG00000065987.13|CD209b antigen	ENSMUST00000084086.9|Cd209b|ENSMUSG00000065987.13|CD209b antigen	ENSMUST00000171635.8|Cd209b|ENSMUSG00000065987.13|CD209b antigen
mm39_v1_chr6_-_3494587_3494598	2.28592	Nkx2-2	ENSMUST00000049985.15|Hepacam2|ENSMUSG00000044156.15|HEPACAM family member 2
mm39_v1_chr1_-_165830160_165830182	2.25843	Nkx2-2	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr18_+_43897354_43897398	2.20664	Nkx2-2	ENSMUST00000187157.7|Scgb3a2|ENSMUSG00000038791.15|secretoglobin, family 3A, member 2	ENSMUST00000043803.13|Scgb3a2|ENSMUSG00000038791.15|secretoglobin, family 3A, member 2	ENSMUST00000189750.2|Scgb3a2|ENSMUSG00000038791.15|secretoglobin, family 3A, member 2
mm39_v1_chr11_+_105885461_105885504	2.19049	Nkx2-2	ENSMUST00000190995.2|Ace3|ENSMUSG00000101605.2|angiotensin I converting enzyme (peptidyl-dipeptidase A) 3
mm39_v1_chr6_+_67586695_67586701	2.17829	Nkx2-2	ENSMUST00000103303.3|Igkv1-135|ENSMUSG00000096336.3|immunoglobulin kappa variable 1-135
mm39_v1_chr14_-_49482846_49482931	2.13028	Nkx2-2	ENSMUST00000227113.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000130853.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000228936.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000022398.15|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198
mm39_v1_chr3_-_107893676_107893790	2.12754	Nkx2-2	ENSMUST00000066530.7|Gstm2|ENSMUSG00000040562.13|glutathione S-transferase, mu 2	ENSMUST00000012348.9|Gstm2|ENSMUSG00000040562.13|glutathione S-transferase, mu 2
mm39_v1_chr1_+_173501215_173501253	2.09866	Nkx2-2	ENSMUST00000085876.12|Ifi208|ENSMUSG00000066677.13|interferon activated gene 208
mm39_v1_chr2_+_127750978_127750978	2.04317	Nkx2-2	ENSMUST00000110344.2|Acoxl|ENSMUSG00000027380.11|acyl-Coenzyme A oxidase-like
mm39_v1_chr6_-_23650297_23650308	2.04063	Nkx2-2	ENSMUST00000063548.4|Rnf133|ENSMUSG00000051956.5|ring finger protein 133
mm39_v1_chr4_-_45532470_45532470	2.03349	Nkx2-2	ENSMUST00000147448.2|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr11_-_79971750_79971828	2.02607	Nkx2-2	ENSMUST00000103233.10|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3	ENSMUST00000061283.15|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3
mm39_v1_chr7_-_122969064_122969144	1.99342	Nkx2-2	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr13_-_20008397_20008439	1.97044	Nkx2-2	ENSMUST00000222664.2|Gpr141|ENSMUSG00000053101.4|G protein-coupled receptor 141	ENSMUST00000065335.3|Gpr141|ENSMUSG00000053101.4|G protein-coupled receptor 141
mm39_v1_chr11_+_48691175_48691201	1.93227	Nkx2-2	ENSMUST00000020640.8|Rack1|ENSMUSG00000020372.16|receptor for activated C kinase 1
mm39_v1_chr7_+_122969004_122969025	1.91209	Nkx2-2	ENSMUST00000206721.2|Lcmt1|ENSMUSG00000030763.8|leucine carboxyl methyltransferase 1
mm39_v1_chr3_+_108646974_108646974	1.90046	Nkx2-2	ENSMUST00000133931.9|Aknad1|ENSMUSG00000049565.17|AKNA domain containing 1
mm39_v1_chr7_+_121333700_121333711	1.86991	Nkx2-2	ENSMUST00000000221.6|Scnn1g|ENSMUSG00000000216.9|sodium channel, nonvoltage-gated 1 gamma
mm39_v1_chr10_+_57521930_57521954	1.85872	Nkx2-2	ENSMUST00000177325.8|Pkib|ENSMUSG00000019876.16|protein kinase inhibitor beta, cAMP dependent, testis specific
mm39_v1_chr12_+_78240999_78241016	1.84462	Nkx2-2	ENSMUST00000211288.3|Gm6657|ENSMUSG00000099418.4|predicted gene 6657
mm39_v1_chr1_-_165830187_165830247	1.81859	Nkx2-2	ENSMUST00000184643.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160908.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000027850.15|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160260.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr3_-_49711765_49711772	1.80836	Nkx2-2	ENSMUST00000035931.13|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr14_-_101846459_101846511	1.79812	Nkx2-2	ENSMUST00000161991.8|Tbc1d4|ENSMUSG00000033083.17|TBC1 domain family, member 4
mm39_v1_chr13_-_19917092_19917125	1.79597	Nkx2-2	ENSMUST00000151029.3|Gpr141b|ENSMUSG00000047462.10|G protein-coupled receptor 141B
mm39_v1_chr16_-_85347305_85347321	1.78308	Nkx2-2	ENSMUST00000175700.8|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1	ENSMUST00000114174.3|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1
mm39_v1_chr8_+_46387647_46387664	1.75616	Nkx2-2	ENSMUST00000095326.10|Ccdc110|ENSMUSG00000071104.11|coiled-coil domain containing 110
mm39_v1_chrX_+_106193167_106193221	1.74886	Nkx2-2	ENSMUST00000137107.2|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B	ENSMUST00000067249.3|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B
mm39_v1_chr5_+_67125759_67125790	1.74262	Nkx2-2	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr14_-_56026266_56026328	1.72764	Nkx2-2	ENSMUST00000168716.8|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3	ENSMUST00000178399.3|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3	ENSMUST00000022830.14|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3
mm39_v1_chr5_+_11392646_11392646	1.71931	Nkx2-2	ENSMUST00000179482.2|Speer1|ENSMUSG00000095829.9|spermatogenesis associated glutamate (E)-rich protein 1
mm39_v1_chr5_+_11821653_11821653	1.71931	Nkx2-2	ENSMUST00000178158.2|Gm8926|ENSMUSG00000094205.8|predicted gene 8926
mm39_v1_chr6_-_73446560_73446650	1.68145	Nkx2-2	ENSMUST00000070163.6|4931417E11Rik|ENSMUSG00000056197.7|RIKEN cDNA 4931417E11 gene
mm39_v1_chr9_+_108225026_108225125	1.64722	Nkx2-2	ENSMUST00000035237.12|Usp4|ENSMUSG00000032612.15|ubiquitin specific peptidase 4 (proto-oncogene)	ENSMUST00000194959.6|Usp4|ENSMUSG00000032612.15|ubiquitin specific peptidase 4 (proto-oncogene)
mm39_v1_chr5_+_149363168_149363186	1.63474	Nkx2-2	ENSMUST00000201683.4|Tex26|ENSMUSG00000029660.11|testis expressed 26	ENSMUST00000202920.4|Tex26|ENSMUSG00000029660.11|testis expressed 26
mm39_v1_chr18_-_44308126_44308146	1.63416	Nkx2-2	ENSMUST00000066328.5|Spinkl|ENSMUSG00000053729.5|serine protease inhibitor, Kazal type-like
mm39_v1_chr14_+_32713387_32713415	1.6278	Nkx2-2	ENSMUST00000123822.8|Lrrc18|ENSMUSG00000041673.13|leucine rich repeat containing 18	ENSMUST00000120951.2|Lrrc18|ENSMUSG00000041673.13|leucine rich repeat containing 18
mm39_v1_chr18_-_3309858_3309915	1.62323	Nkx2-2	ENSMUST00000144496.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator	ENSMUST00000154715.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr13_-_76453191_76453191	1.62172	Nkx2-2	ENSMUST00000208418.2|Fam81b|ENSMUSG00000109228.3|family with sequence similarity 81, member B
mm39_v1_chr14_-_42872221_42872221	1.58439	Nkx2-2	ENSMUST00000100694.5|Gm10376|ENSMUSG00000072605.11|predicted gene 10376
mm39_v1_chr5_-_110987441_110987600	1.58077	Nkx2-2	ENSMUST00000145318.2|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr4_+_102843540_102843592	1.56939	Nkx2-2	ENSMUST00000030248.12|Dynlt5|ENSMUSG00000028523.15|dynein light chain Tctex-type 5	ENSMUST00000125417.9|Dynlt5|ENSMUSG00000028523.15|dynein light chain Tctex-type 5	ENSMUST00000169211.3|Dynlt5|ENSMUSG00000028523.15|dynein light chain Tctex-type 5
mm39_v1_chr5_+_11733203_11733203	1.54874	Nkx2-2	ENSMUST00000178989.2|Gm8922|ENSMUSG00000094105.8|predicted gene 8922
mm39_v1_chrX_+_106193060_106193089	1.54169	Nkx2-2	ENSMUST00000125676.8|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B	ENSMUST00000180182.2|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B
mm39_v1_chr14_+_32713336_32713343	1.52445	Nkx2-2	ENSMUST00000038956.12|Lrrc18|ENSMUSG00000041673.13|leucine rich repeat containing 18
mm39_v1_chr3_-_130524024_130524047	1.52402	Nkx2-2	ENSMUST00000079085.11|Rpl34|ENSMUSG00000062006.13|ribosomal protein L34
mm39_v1_chr5_-_34326847_34326878	1.50117	Nkx2-2	ENSMUST00000202042.2|Haus3|ENSMUSG00000079555.3|HAUS augmin-like complex, subunit 3	ENSMUST00000060049.8|Haus3|ENSMUSG00000079555.3|HAUS augmin-like complex, subunit 3
mm39_v1_chr5_+_11178835_11178835	1.49926	Nkx2-2	ENSMUST00000178863.2|Gm8879|ENSMUSG00000094025.8|predicted gene 8879
mm39_v1_chr5_+_67125902_67125920	1.49851	Nkx2-2	ENSMUST00000127184.8|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr5_+_11467593_11467593	1.49508	Nkx2-2	ENSMUST00000179679.2|Gm8897|ENSMUSG00000096732.8|predicted gene 8897
mm39_v1_chr8_+_46984016_46984101	1.48156	Nkx2-2	ENSMUST00000152423.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr2_-_140231618_140231650	1.47241	Nkx2-2	ENSMUST00000122367.8|Sel1l2|ENSMUSG00000074764.12|sel-1 suppressor of lin-12-like 2 (C. elegans)	ENSMUST00000120133.2|Sel1l2|ENSMUSG00000074764.12|sel-1 suppressor of lin-12-like 2 (C. elegans)
mm39_v1_chr13_-_67080968_67081133	1.44062	Nkx2-2	ENSMUST00000172597.8|Mterf3|ENSMUSG00000021519.12|mitochondrial transcription termination factor 3	ENSMUST00000173773.2|Mterf3|ENSMUSG00000021519.12|mitochondrial transcription termination factor 3
mm39_v1_chr17_+_7592045_7592268	1.43947	Nkx2-2	ENSMUST00000095726.11|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000128533.8|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000129709.8|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000147803.8|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000140192.8|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000138222.8|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a	ENSMUST00000144861.2|Tcp10a|ENSMUSG00000071322.13|t-complex protein 10a
mm39_v1_chr3_-_49711706_49711758	1.4383	Nkx2-2	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr6_+_68402550_68402568	1.43572	Nkx2-2	ENSMUST00000103323.3|Igkv16-104|ENSMUSG00000076522.3|immunoglobulin kappa variable 16-104
mm39_v1_chr11_+_23234644_23234669	1.43204	Nkx2-2	ENSMUST00000150750.3|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr14_+_24540745_24540761	1.42176	Nkx2-2	ENSMUST00000112384.10|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chr10_-_13053733_13053771	1.41528	Nkx2-2	ENSMUST00000019954.6|Zc2hc1b|ENSMUSG00000019815.8|zinc finger, C2HC-type containing 1B
mm39_v1_chrX_+_110154017_110154030	1.41091	Nkx2-2	ENSMUST00000210720.3|Cylc1|ENSMUSG00000073001.5|cylicin, basic protein of sperm head cytoskeleton 1
mm39_v1_chr19_+_6097083_6097110	1.40857	Nkx2-2	ENSMUST00000134667.8|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr14_-_59632830_59632830	1.40639	Nkx2-2	ENSMUST00000166912.3|Phf11c|ENSMUSG00000091144.3|PHD finger protein 11C
mm39_v1_chr11_+_75521800_75521902	1.40102	Nkx2-2	ENSMUST00000006286.9|Inpp5k|ENSMUSG00000006127.10|inositol polyphosphate 5-phosphatase K
mm39_v1_chr3_-_105940130_105940204	1.39627	Nkx2-2	ENSMUST00000200146.2|Chil5|ENSMUSG00000043873.12|chitinase-like 5
mm39_v1_chr6_-_120334382_120334396	1.3863	Nkx2-2	ENSMUST00000032283.12|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr5_-_35897331_35897401	1.37479	Nkx2-2	ENSMUST00000201511.2|Sh3tc1|ENSMUSG00000036553.17|SH3 domain and tetratricopeptide repeats 1
mm39_v1_chr10_+_79500387_79500398	1.37206	Nkx2-2	ENSMUST00000020554.8|Madcam1|ENSMUSG00000020310.10|mucosal vascular addressin cell adhesion molecule 1
mm39_v1_chr5_+_11234174_11234174	1.37189	Nkx2-2	ENSMUST00000168407.3|Gm5861|ENSMUSG00000095918.8|predicted gene 5861
mm39_v1_chr19_+_6097111_6097134	1.35174	Nkx2-2	ENSMUST00000025723.9|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr6_-_70769135_70769216	1.34222	Nkx2-2	ENSMUST00000066134.6|Rpia|ENSMUSG00000053604.6|ribose 5-phosphate isomerase A
mm39_v1_chr5_+_11553780_11553780	1.33722	Nkx2-2	ENSMUST00000179375.2|Gm8906|ENSMUSG00000095296.8|predicted gene 8906
mm39_v1_chr18_+_20443795_20443868	1.3315	Nkx2-2	ENSMUST00000077146.4|Dsg1a|ENSMUSG00000069441.4|desmoglein 1 alpha
mm39_v1_chr12_+_78243846_78243948	1.32177	Nkx2-2	ENSMUST00000188791.2|Gm6657|ENSMUSG00000099418.4|predicted gene 6657
mm39_v1_chr17_+_43671314_43671345	1.32044	Nkx2-2	ENSMUST00000226087.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr9_-_107512566_107512584	1.30258	Nkx2-2	ENSMUST00000055704.12|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm39_v1_chr5_+_149363114_149363129	1.29692	Nkx2-2	ENSMUST00000031667.8|Tex26|ENSMUSG00000029660.11|testis expressed 26
mm39_v1_chr4_+_115420876_115420896	1.29559	Nkx2-2	ENSMUST00000126645.8|Cyp4a31|ENSMUSG00000028712.13|cytochrome P450, family 4, subfamily a, polypeptide 31	ENSMUST00000030480.4|Cyp4a31|ENSMUSG00000028712.13|cytochrome P450, family 4, subfamily a, polypeptide 31
mm39_v1_chr12_+_33003882_33003890	1.29391	Nkx2-2	ENSMUST00000076698.13|Sypl|ENSMUSG00000020570.16|synaptophysin-like protein
mm39_v1_chr6_+_137731526_137731598	1.2761	Nkx2-2	ENSMUST00000203216.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000087675.9|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000203693.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr6_+_21985902_21985971	1.27457	Nkx2-2	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr16_+_32315076_32315086	1.27309	Nkx2-2	ENSMUST00000064192.8|Zdhhc19|ENSMUSG00000052363.9|zinc finger, DHHC domain containing 19
mm39_v1_chr11_+_68393845_68393902	1.24444	Nkx2-2	ENSMUST00000102613.8|Pik3r6|ENSMUSG00000046207.15|phosphoinositide-3-kinase regulatory subunit 5	ENSMUST00000060441.7|Pik3r6|ENSMUSG00000046207.15|phosphoinositide-3-kinase regulatory subunit 5
mm39_v1_chr11_-_115078147_115078216	1.2379	Nkx2-2	ENSMUST00000103038.8|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)	ENSMUST00000103039.2|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)	ENSMUST00000103040.11|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)
mm39_v1_chr14_+_54000594_54000642	1.23457	Nkx2-2	ENSMUST00000103589.6|Trav14-3|ENSMUSG00000094212.4|T cell receptor alpha variable 14-3
mm39_v1_chr15_-_10470575_10470613	1.23262	Nkx2-2	ENSMUST00000136591.8|Dnajc21|ENSMUSG00000044224.17|DnaJ heat shock protein family (Hsp40) member C21
mm39_v1_chr16_+_23338960_23339155	1.21572	Nkx2-2	ENSMUST00000211460.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338	ENSMUST00000210658.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338	ENSMUST00000209422.2|Rtp4|ENSMUSG00000033355.7|receptor transporter protein 4	ENSMUST00000209198.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338	ENSMUST00000210371.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338	ENSMUST00000211499.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338	ENSMUST00000210795.2|Gm45338|ENSMUSG00000109783.2|predicted gene 45338
mm39_v1_chr13_+_47347301_47347313	1.21524	Nkx2-2	ENSMUST00000110111.4|Rnf144b|ENSMUSG00000038068.16|ring finger protein 144B
mm39_v1_chr6_+_122967309_122967326	1.2059	Nkx2-2	ENSMUST00000079379.3|Clec4a4|ENSMUSG00000059639.3|C-type lectin domain family 4, member a4
mm39_v1_chr13_-_103901010_103901090	1.20258	Nkx2-2	ENSMUST00000210489.2|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chrX_+_67864699_67864699	1.19722	Nkx2-2	ENSMUST00000096420.3|Gm14698|ENSMUSG00000071748.3|predicted gene 14698
mm39_v1_chr6_+_67816777_67816777	1.18897	Nkx2-2	ENSMUST00000200578.5|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129	ENSMUST00000103308.3|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129
mm39_v1_chr3_-_75177378_75177392	1.18784	Nkx2-2	ENSMUST00000039047.5|Serpini2|ENSMUSG00000034139.5|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm39_v1_chr1_-_161807205_161807251	1.18432	Nkx2-2	ENSMUST00000162676.2|4930558K02Rik|ENSMUSG00000086277.3|RIKEN cDNA 4930558K02 gene
mm39_v1_chr6_+_5390386_5390427	1.18044	Nkx2-2	ENSMUST00000183358.2|Asb4|ENSMUSG00000042607.16|ankyrin repeat and SOCS box-containing 4
mm39_v1_chr6_-_120334400_120334450	1.17979	Nkx2-2	ENSMUST00000112703.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr5_+_11307124_11307124	1.17593	Nkx2-2	ENSMUST00000177727.2|Gm8890|ENSMUSG00000096846.8|predicted gene 8890
mm39_v1_chr16_+_32315090_32315118	1.17068	Nkx2-2	ENSMUST00000231510.2|Zdhhc19|ENSMUSG00000052363.9|zinc finger, DHHC domain containing 19
mm39_v1_chr3_-_6685492_6685509	1.16856	Nkx2-2	ENSMUST00000091364.4|1700008P02Rik|ENSMUSG00000069118.4|RIKEN cDNA 1700008P02 gene
mm39_v1_chrX_+_106836189_106836215	1.16752	Nkx2-2	ENSMUST00000101292.9|Tent5d|ENSMUSG00000073007.11|terminal nucleotidyltransferase 5D
mm39_v1_chr14_+_53994813_53994813	1.16672	Nkx2-2	ENSMUST00000180380.3|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr6_+_68026941_68026967	1.15796	Nkx2-2	ENSMUST00000103316.2|Igkv9-120|ENSMUSG00000094872.2|immunoglobulin kappa chain variable 9-120
mm39_v1_chr15_-_102259158_102259209	1.15615	Nkx2-2	ENSMUST00000231061.2|Aaas|ENSMUSG00000036678.9|achalasia, adrenocortical insufficiency, alacrimia	ENSMUST00000041208.9|Aaas|ENSMUSG00000036678.9|achalasia, adrenocortical insufficiency, alacrimia
mm39_v1_chr1_-_69723316_69723473	1.14564	Nkx2-2	ENSMUST00000190855.7|Ikzf2|ENSMUSG00000025997.14|IKAROS family zinc finger 2	ENSMUST00000188110.7|Ikzf2|ENSMUSG00000025997.14|IKAROS family zinc finger 2	ENSMUST00000191262.7|Ikzf2|ENSMUSG00000025997.14|IKAROS family zinc finger 2
mm39_v1_chr4_-_108075119_108075262	1.13497	Nkx2-2	ENSMUST00000223127.2|Zyg11a|ENSMUSG00000034645.15|zyg-11 family member A, cell cycle regulator	ENSMUST00000043793.7|Zyg11a|ENSMUSG00000034645.15|zyg-11 family member A, cell cycle regulator	ENSMUST00000106690.9|Zyg11a|ENSMUSG00000034645.15|zyg-11 family member A, cell cycle regulator
mm39_v1_chr6_+_137731599_137731613	1.11903	Nkx2-2	ENSMUST00000204356.2|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr2_+_51962831_51962866	1.11827	Nkx2-2	ENSMUST00000112693.10|Rif1|ENSMUSG00000036202.17|replication timing regulatory factor 1
mm39_v1_chr1_-_155910567_155910626	1.1147	Nkx2-2	ENSMUST00000141878.8|Tor1aip1|ENSMUSG00000026466.17|torsin A interacting protein 1
mm39_v1_chr11_+_78192355_78192432	1.09884	Nkx2-2	ENSMUST00000045026.4|Spag5|ENSMUSG00000002055.10|sperm associated antigen 5
mm39_v1_chr9_-_106768601_106768619	1.09317	Nkx2-2	ENSMUST00000069036.14|Manf|ENSMUSG00000032575.17|mesencephalic astrocyte-derived neurotrophic factor
mm39_v1_chr17_+_79934096_79934127	1.07861	Nkx2-2	ENSMUST00000224618.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr15_+_66542598_66542603	1.07517	Nkx2-2	ENSMUST00000065916.14|Tg|ENSMUSG00000053469.15|thyroglobulin
mm39_v1_chr17_+_79919267_79919292	1.07514	Nkx2-2	ENSMUST00000223924.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr2_-_152857239_152857347	1.061	Nkx2-2	ENSMUST00000028972.9|Pdrg1|ENSMUSG00000027472.15|p53 and DNA damage regulated 1
mm39_v1_chr13_+_23940964_23940996	1.05187	Nkx2-2	ENSMUST00000102965.4|H4c2|ENSMUSG00000069266.6|H4 clustered histone 2
mm39_v1_chr5_-_110987604_110987653	1.05027	Nkx2-2	ENSMUST00000056937.12|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr11_-_45845992_45846020	1.04703	Nkx2-2	ENSMUST00000109254.2|Thg1l|ENSMUSG00000011254.17|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm39_v1_chr19_-_46950948_46951018	1.04065	Nkx2-2	ENSMUST00000236924.2|Nt5c2|ENSMUSG00000025041.18|5'-nucleotidase, cytosolic II
mm39_v1_chr3_-_104771716_104771821	1.03494	Nkx2-2	ENSMUST00000195912.2|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1	ENSMUST00000094028.10|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1
mm39_v1_chrX_+_61511597_61511597	1.02111	Nkx2-2	ENSMUST00000033537.2|4931400O07Rik|ENSMUSG00000031194.2|RIKEN cDNA 4931400O07 gene
mm39_v1_chr6_-_50631418_50631427	1.01814	Nkx2-2	ENSMUST00000031853.8|Npvf|ENSMUSG00000029831.8|neuropeptide VF precursor
mm39_v1_chr12_+_105996961_105996984	1.01679	Nkx2-2	ENSMUST00000220629.2|Vrk1|ENSMUSG00000021115.16|vaccinia related kinase 1
mm39_v1_chr5_-_83502966_83503042	1.00984	Nkx2-2	ENSMUST00000053543.11|Tecrl|ENSMUSG00000049537.11|trans-2,3-enoyl-CoA reductase-like
mm39_v1_chr15_-_74869684_74869880	1.00876	Nkx2-2	ENSMUST00000190188.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000189068.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000186526.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187171.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187994.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A
mm39_v1_chr9_+_39853511_39853511	1.00327	Nkx2-2	ENSMUST00000062833.6|Olfr974|ENSMUSG00000051493.8|olfactory receptor 974
mm39_v1_chr15_+_6552270_6552346	0.996408	Nkx2-2	ENSMUST00000226412.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr7_+_19079058_19079074	0.988065	Nkx2-2	ENSMUST00000160369.8|Ercc1|ENSMUSG00000003549.10|excision repair cross-complementing rodent repair deficiency, complementation group 1
mm39_v1_chr5_+_110988095_110988149	0.981773	Nkx2-2	ENSMUST00000198373.2|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2
mm39_v1_chrX_+_100317629_100317640	0.980327	Nkx2-2	ENSMUST00000117706.8|Med12|ENSMUSG00000079487.12|mediator complex subunit 12
mm39_v1_chr6_+_21986445_21986595	0.974373	Nkx2-2	ENSMUST00000115382.8|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr14_+_24540777_24540798	0.964016	Nkx2-2	ENSMUST00000169826.3|Rps24|ENSMUSG00000025290.18|ribosomal protein S24	ENSMUST00000225023.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24	ENSMUST00000223999.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chr3_-_98496123_98496123	0.953064	Nkx2-2	ENSMUST00000178221.4|Gm10681|ENSMUSG00000095388.8|predicted gene 10681
mm39_v1_chr3_+_137849189_137849238	0.946792	Nkx2-2	ENSMUST00000040321.13|Trmt10a|ENSMUSG00000004127.13|tRNA methyltransferase 10A
mm39_v1_chr14_-_73286504_73286517	0.942832	Nkx2-2	ENSMUST00000044664.12|Cysltr2|ENSMUSG00000033470.13|cysteinyl leukotriene receptor 2
mm39_v1_chr5_+_110987839_110987888	0.939124	Nkx2-2	ENSMUST00000200172.2|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2	ENSMUST00000066160.3|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2
mm39_v1_chr1_+_40478787_40478815	0.929771	Nkx2-2	ENSMUST00000097772.10|Il1rl1|ENSMUSG00000026069.16|interleukin 1 receptor-like 1
mm39_v1_chr7_-_43906802_43906802	0.920311	Nkx2-2	ENSMUST00000107945.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4	ENSMUST00000118216.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4
mm39_v1_chr14_+_53666165_53666178	0.91879	Nkx2-2	ENSMUST00000180549.3|Trav6-3|ENSMUSG00000094220.6|T cell receptor alpha variable 6-3
mm39_v1_chr14_-_73286535_73286563	0.899448	Nkx2-2	ENSMUST00000169168.3|Cysltr2|ENSMUSG00000033470.13|cysteinyl leukotriene receptor 2
mm39_v1_chr18_-_3280999_3281088	0.888789	Nkx2-2	ENSMUST00000049942.13|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr1_-_66984178_66984302	0.883377	Nkx2-2	ENSMUST00000027151.12|Myl1|ENSMUSG00000061816.16|myosin, light polypeptide 1
mm39_v1_chr6_-_67931692_67931700	0.871778	Nkx2-2	ENSMUST00000103313.3|Igkv9-123|ENSMUSG00000076512.3|immunoglobulin kappa variable 9-123
mm39_v1_chr6_+_68495964_68495996	0.868523	Nkx2-2	ENSMUST00000199510.5|Igkv14-100|ENSMUSG00000096515.6|immunoglobulin kappa chain variable 14-100	ENSMUST00000103325.3|Igkv14-100|ENSMUSG00000096515.6|immunoglobulin kappa chain variable 14-100
mm39_v1_chr2_-_140012447_140012489	0.868065	Nkx2-2	ENSMUST00000046030.8|Esf1|ENSMUSG00000045624.16|ESF1 nucleolar pre-rRNA processing protein homolog
mm39_v1_chr11_-_115078653_115078670	0.865656	Nkx2-2	ENSMUST00000103041.8|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)
mm39_v1_chrX_+_115358631_115358645	0.865521	Nkx2-2	ENSMUST00000101269.2|Cpxcr1|ENSMUSG00000072995.2|CPX chromosome region, candidate 1
mm39_v1_chr14_+_52962756_52962756	0.865223	Nkx2-2	ENSMUST00000181483.3|Trav6d-3|ENSMUSG00000096600.6|T cell receptor alpha variable 6D-3
mm39_v1_chr1_-_155910546_155910563	0.859721	Nkx2-2	ENSMUST00000169241.8|Tor1aip1|ENSMUSG00000026466.17|torsin A interacting protein 1
mm39_v1_chr17_-_3746536_3746536	0.85343	Nkx2-2	ENSMUST00000115800.2|Nox3|ENSMUSG00000023802.5|NADPH oxidase 3
mm39_v1_chr9_+_35470752_35470802	0.849543	Nkx2-2	ENSMUST00000034615.10|Pus3|ENSMUSG00000032103.11|pseudouridine synthase 3	ENSMUST00000121246.2|Pus3|ENSMUSG00000032103.11|pseudouridine synthase 3
mm39_v1_chr17_-_34846323_34846499	0.842314	Nkx2-2	ENSMUST00000168709.3|Gm20460|ENSMUSG00000092176.2|predicted gene 20460	ENSMUST00000064953.15|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000170345.8|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000171121.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000168391.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000169067.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr3_-_98471301_98471301	0.842302	Nkx2-2	ENSMUST00000058728.10|Gm10681|ENSMUSG00000095388.8|predicted gene 10681
mm39_v1_chrX_+_125947591_125947621	0.841668	Nkx2-2	ENSMUST00000096332.2|Gm382|ENSMUSG00000062791.5|predicted gene 382
mm39_v1_chr6_-_120334302_120334364	0.839769	Nkx2-2	ENSMUST00000163827.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr12_-_83534482_83534504	0.838217	Nkx2-2	ENSMUST00000177959.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3	ENSMUST00000178756.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3
mm39_v1_chr6_-_142268667_142268683	0.833615	Nkx2-2	ENSMUST00000128446.2|Slco1a5|ENSMUSG00000063975.14|solute carrier organic anion transporter family, member 1a5
mm39_v1_chr18_-_3281752_3281778	0.821832	Nkx2-2	ENSMUST00000140332.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator	ENSMUST00000147138.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr9_-_119151428_119151517	0.818781	Nkx2-2	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr3_-_57202301_57202320	0.817297	Nkx2-2	ENSMUST00000171384.8|Tm4sf1|ENSMUSG00000027800.15|transmembrane 4 superfamily member 1
mm39_v1_chr2_-_73284262_73284323	0.812284	Nkx2-2	ENSMUST00000102679.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr13_-_38220899_38220936	0.805072	Nkx2-2	ENSMUST00000110233.8|Cage1|ENSMUSG00000044566.16|cancer antigen 1	ENSMUST00000074969.11|Cage1|ENSMUSG00000044566.16|cancer antigen 1	ENSMUST00000131066.2|Cage1|ENSMUSG00000044566.16|cancer antigen 1
mm39_v1_chrX_+_143239577_143239577	0.798813	Nkx2-2	ENSMUST00000155206.8|Trpc5os|ENSMUSG00000072934.11|transient receptor potential cation channel, subfamily C, member 5, opposite strand
mm39_v1_chr11_+_67061908_67062046	0.792158	Nkx2-2	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr11_-_69791756_69791767	0.789351	Nkx2-2	ENSMUST00000018714.13|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene	ENSMUST00000128046.2|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene
mm39_v1_chr10_-_13199971_13200069	0.780858	Nkx2-2	ENSMUST00000105543.9|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr11_-_69791712_69791755	0.779397	Nkx2-2	ENSMUST00000108621.9|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene	ENSMUST00000100969.9|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene
mm39_v1_chr13_-_30039613_30039661	0.776756	Nkx2-2	ENSMUST00000091674.12|Cdkal1|ENSMUSG00000006191.18|CDK5 regulatory subunit associated protein 1-like 1	ENSMUST00000006353.14|Cdkal1|ENSMUSG00000006191.18|CDK5 regulatory subunit associated protein 1-like 1
mm39_v1_chr13_+_34148918_34148989	0.776641	Nkx2-2	ENSMUST00000223479.2|Nqo2|ENSMUSG00000046949.17|N-ribosyldihydronicotinamide quinone reductase 2
mm39_v1_chr11_-_69791774_69791827	0.76831	Nkx2-2	ENSMUST00000102580.10|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene
mm39_v1_chr14_+_53995108_53995108	0.756531	Nkx2-2	ENSMUST00000184905.2|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr17_+_29833822_29833902	0.755671	Nkx2-2	ENSMUST00000234498.2|Rnf8|ENSMUSG00000090083.12|ring finger protein 8
mm39_v1_chr11_-_121410152_121410167	0.754115	Nkx2-2	ENSMUST00000092298.6|Zfp750|ENSMUSG00000039238.7|zinc finger protein 750
mm39_v1_chr19_+_6096606_6096692	0.752344	Nkx2-2	ENSMUST00000138532.8|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin	ENSMUST00000129081.8|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin	ENSMUST00000156550.8|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr5_+_67126304_67126475	0.749768	Nkx2-2	ENSMUST00000132991.5|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr6_-_67919524_67919549	0.742584	Nkx2-2	ENSMUST00000196768.2|Igkv9-124|ENSMUSG00000096632.3|immunoglobulin kappa chain variable 9-124
mm39_v1_chr6_+_97968737_97968882	0.742441	Nkx2-2	ENSMUST00000043628.13|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000203938.2|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr11_+_118334297_118334364	0.735847	Nkx2-2	ENSMUST00000133558.3|C1qtnf1|ENSMUSG00000017446.15|C1q and tumor necrosis factor related protein 1
mm39_v1_chr16_+_25620652_25620678	0.730576	Nkx2-2	ENSMUST00000115304.8|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000115305.2|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000040231.13|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000115306.8|Trp63|ENSMUSG00000022510.15|transformation related protein 63
mm39_v1_chr1_-_16163506_16163565	0.730318	Nkx2-2	ENSMUST00000145070.8|4930444P10Rik|ENSMUSG00000067795.14|RIKEN cDNA 4930444P10 gene	ENSMUST00000151004.2|4930444P10Rik|ENSMUSG00000067795.14|RIKEN cDNA 4930444P10 gene
mm39_v1_chr7_-_126496534_126496596	0.730088	Nkx2-2	ENSMUST00000120007.8|Tmem219|ENSMUSG00000060538.15|transmembrane protein 219
mm39_v1_chr17_-_71153283_71153321	0.711604	Nkx2-2	ENSMUST00000156484.2|Tgif1|ENSMUSG00000047407.18|TGFB-induced factor homeobox 1
mm39_v1_chr14_+_24540815_24540835	0.708094	Nkx2-2	ENSMUST00000224568.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chrX_+_21581135_21581290	0.701793	Nkx2-2	ENSMUST00000033414.8|Slc6a14|ENSMUSG00000031089.8|solute carrier family 6 (neurotransmitter transporter), member 14
mm39_v1_chrX_+_6327790_6327803	0.697329	Nkx2-2	ENSMUST00000143641.4|Shroom4|ENSMUSG00000068270.16|shroom family member 4
mm39_v1_chr2_+_67276338_67276353	0.695743	Nkx2-2	ENSMUST00000239060.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000028410.4|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000112347.8|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000238878.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2
mm39_v1_chr6_+_136530970_136531002	0.68986	Nkx2-2	ENSMUST00000189535.2|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr14_-_50425655_50425655	0.688303	Nkx2-2	ENSMUST00000205837.3|Olfr730|ENSMUSG00000109835.3|olfactory receptor 730
mm39_v1_chr5_-_3646071_3646202	0.684495	Nkx2-2	ENSMUST00000121877.3|Rbm48|ENSMUSG00000040302.18|RNA binding motif protein 48
mm39_v1_chr6_+_67768007_67768030	0.679518	Nkx2-2	ENSMUST00000196006.5|Igkv14-130|ENSMUSG00000096461.6|immunoglobulin kappa variable 14-130	ENSMUST00000103307.3|Igkv14-130|ENSMUSG00000096461.6|immunoglobulin kappa variable 14-130
mm39_v1_chr13_-_59841914_59841922	0.673193	Nkx2-2	ENSMUST00000061597.7|4921517D22Rik|ENSMUSG00000049902.7|RIKEN cDNA 4921517D22 gene
mm39_v1_chr4_+_62537750_62537819	0.668239	Nkx2-2	ENSMUST00000084521.11|Rgs3|ENSMUSG00000059810.19|regulator of G-protein signaling 3	ENSMUST00000107424.2|Rgs3|ENSMUSG00000059810.19|regulator of G-protein signaling 3
mm39_v1_chr14_-_54923517_54923625	0.648949	Nkx2-2	ENSMUST00000125265.2|Acin1|ENSMUSG00000022185.20|apoptotic chromatin condensation inducer 1
mm39_v1_chr1_-_80255156_80255168	0.647404	Nkx2-2	ENSMUST00000168372.2|Cul3|ENSMUSG00000004364.15|cullin 3
mm39_v1_chr9_-_108305683_108305683	0.645678	Nkx2-2	ENSMUST00000076592.4|Iho1|ENSMUSG00000047220.6|interactor of HORMAD1 1
mm39_v1_chr5_+_31771281_31771323	0.643471	Nkx2-2	ENSMUST00000031024.14|Mrpl33|ENSMUSG00000106918.4|mitochondrial ribosomal protein L33	ENSMUST00000202033.2|Gm43809|ENSMUSG00000105617.5|predicted gene 43809
mm39_v1_chr17_-_86812646_86812660	0.642123	Nkx2-2	ENSMUST00000095186.3|Gm10309|ENSMUSG00000071036.3|predicted gene 10309
mm39_v1_chr11_+_88864753_88864787	0.635091	Nkx2-2	ENSMUST00000036649.8|Coil|ENSMUSG00000033983.15|coilin
mm39_v1_chr7_-_100504610_100504648	0.629196	Nkx2-2	ENSMUST00000156855.8|Relt|ENSMUSG00000008318.11|RELT tumor necrosis factor receptor
mm39_v1_chr16_-_57427179_57427243	0.619178	Nkx2-2	ENSMUST00000114371.5|Cmss1|ENSMUSG00000022748.9|cms small ribosomal subunit 1	ENSMUST00000232413.2|Cmss1|ENSMUSG00000022748.9|cms small ribosomal subunit 1
mm39_v1_chr3_+_137849239_137849278	0.617406	Nkx2-2	ENSMUST00000162864.8|Trmt10a|ENSMUSG00000004127.13|tRNA methyltransferase 10A
mm39_v1_chr4_+_59626185_59626262	0.611836	Nkx2-2	ENSMUST00000070150.11|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene	ENSMUST00000052420.7|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene
mm39_v1_chr6_-_138635447_138635542	0.606575	Nkx2-2	ENSMUST00000054786.6|Igbp1b|ENSMUSG00000046717.6|immunoglobulin (CD79A) binding protein 1b
mm39_v1_chr16_-_23339548_23339565	0.603741	Nkx2-2	ENSMUST00000089883.7|Masp1|ENSMUSG00000022887.10|mannan-binding lectin serine peptidase 1
mm39_v1_chr7_-_26866157_26866227	0.599859	Nkx2-2	ENSMUST00000080058.11|Egln2|ENSMUSG00000058709.12|egl-9 family hypoxia-inducible factor 2
mm39_v1_chr17_-_37523969_37524009	0.598968	Nkx2-2	ENSMUST00000060728.7|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95	ENSMUST00000216318.2|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95
mm39_v1_chr7_-_80053063_80053104	0.597612	Nkx2-2	ENSMUST00000147150.2|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr7_-_102540089_102540089	0.587814	Nkx2-2	ENSMUST00000217024.2|Olfr569|ENSMUSG00000062142.6|olfactory receptor 569
mm39_v1_chr12_-_52074846_52074846	0.585821	Nkx2-2	ENSMUST00000040161.5|Gpr33|ENSMUSG00000035148.5|G protein-coupled receptor 33
mm39_v1_chr10_-_75609185_75609268	0.585522	Nkx2-2	ENSMUST00000001716.8|Ddt|ENSMUSG00000001666.9|D-dopachrome tautomerase
mm39_v1_chr6_-_69609162_69609216	0.582491	Nkx2-2	ENSMUST00000199437.2|Igkv4-54|ENSMUSG00000094319.3|immunoglobulin kappa chain variable 4-54
mm39_v1_chr14_-_44987797_44987797	0.576456	Nkx2-2	ENSMUST00000226900.2|Gm8267|ENSMUSG00000091923.9|predicted gene 8267
mm39_v1_chr11_+_57409484_57409521	0.560568	Nkx2-2	ENSMUST00000108849.8|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3	ENSMUST00000020830.14|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3
mm39_v1_chr1_-_66902429_66902444	0.555293	Nkx2-2	ENSMUST00000027153.6|Acadl|ENSMUSG00000026003.6|acyl-Coenzyme A dehydrogenase, long-chain
mm39_v1_chr2_+_110551976_110551993	0.552912	Nkx2-2	ENSMUST00000090332.5|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr16_-_22847829_22847856	0.551397	Nkx2-2	ENSMUST00000100046.9|Kng2|ENSMUSG00000060459.15|kininogen 2
mm39_v1_chr4_-_73869071_73869089	0.5439	Nkx2-2	ENSMUST00000095023.2|2310002L09Rik|ENSMUSG00000028396.6|RIKEN cDNA 2310002L09 gene	ENSMUST00000030101.4|2310002L09Rik|ENSMUSG00000028396.6|RIKEN cDNA 2310002L09 gene
mm39_v1_chr6_-_42442130_42442130	0.541636	Nkx2-2	ENSMUST00000216650.2|Olfr458|ENSMUSG00000068574.3|olfactory receptor 458
mm39_v1_chr3_-_115800989_115801060	0.54002	Nkx2-2	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr6_-_138013901_138013901	0.535197	Nkx2-2	ENSMUST00000150278.3|Slc15a5|ENSMUSG00000044378.13|solute carrier family 15, member 5
mm39_v1_chr13_+_34148691_34148734	0.532014	Nkx2-2	ENSMUST00000021843.13|Nqo2|ENSMUSG00000046949.17|N-ribosyldihydronicotinamide quinone reductase 2
mm39_v1_chr6_-_69020489_69020543	0.531074	Nkx2-2	ENSMUST00000103342.4|Igkv4-79|ENSMUSG00000076541.4|immunoglobulin kappa variable 4-79
mm39_v1_chr14_+_53872276_53872290	0.526369	Nkx2-2	ENSMUST00000103658.4|Trav13-2|ENSMUSG00000076846.4|T cell receptor alpha variable 13-2
mm39_v1_chr14_+_54082691_54082733	0.525122	Nkx2-2	ENSMUST00000103674.6|Trav19|ENSMUSG00000076862.6|T cell receptor alpha variable 19
mm39_v1_chr7_+_127836502_127836559	0.522854	Nkx2-2	ENSMUST00000044660.6|Armc5|ENSMUSG00000042178.7|armadillo repeat containing 5
mm39_v1_chr1_+_72750418_72750454	0.519768	Nkx2-2	ENSMUST00000059980.11|Rpl37a|ENSMUSG00000046330.11|ribosomal protein L37a
mm39_v1_chr5_+_114313940_114313997	0.51975	Nkx2-2	ENSMUST00000146841.2|Acacb|ENSMUSG00000042010.17|acetyl-Coenzyme A carboxylase beta
mm39_v1_chr13_-_93774469_93774469	0.51728	Nkx2-2	ENSMUST00000099309.6|Bhmt|ENSMUSG00000074768.7|betaine-homocysteine methyltransferase
mm39_v1_chr17_+_71326510_71326517	0.515347	Nkx2-2	ENSMUST00000073211.13|Myom1|ENSMUSG00000024049.16|myomesin 1	ENSMUST00000024847.14|Myom1|ENSMUSG00000024049.16|myomesin 1
mm39_v1_chr12_-_113760187_113760187	0.505079	Nkx2-2	ENSMUST00000192911.2|Ighv2-6-8|ENSMUSG00000076646.4|immunoglobulin heavy variable 2-6-8	ENSMUST00000103455.3|Ighv2-6-8|ENSMUSG00000076646.4|immunoglobulin heavy variable 2-6-8
mm39_v1_chr1_+_36411312_36411372	0.488783	Nkx2-2	ENSMUST00000179162.7|Fer1l5|ENSMUSG00000037432.16|fer-1-like 5 (C. elegans)
mm39_v1_chr14_-_104760051_104760143	0.480598	Nkx2-2	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr18_-_84969601_84969661	0.479649	Nkx2-2	ENSMUST00000025547.4|Timm21|ENSMUSG00000024645.6|translocase of inner mitochondrial membrane 21
mm39_v1_chr3_+_137849560_137849605	0.476157	Nkx2-2	ENSMUST00000159622.8|Trmt10a|ENSMUSG00000004127.13|tRNA methyltransferase 10A
mm39_v1_chr15_+_79578141_79578186	0.470264	Nkx2-2	ENSMUST00000230898.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1	ENSMUST00000229046.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr1_-_66984521_66984577	0.462547	Nkx2-2	ENSMUST00000160100.2|Myl1|ENSMUSG00000061816.16|myosin, light polypeptide 1
mm39_v1_chr6_+_42377172_42377172	0.456472	Nkx2-2	ENSMUST00000057398.4|Tas2r143|ENSMUSG00000046652.4|taste receptor, type 2, member 143
mm39_v1_chr6_+_8520006_8520058	0.453549	Nkx2-2	ENSMUST00000162567.8|Glcci1|ENSMUSG00000029638.18|glucocorticoid induced transcript 1	ENSMUST00000161217.8|Glcci1|ENSMUSG00000029638.18|glucocorticoid induced transcript 1
mm39_v1_chr3_+_137849608_137849680	0.450401	Nkx2-2	ENSMUST00000159481.8|Trmt10a|ENSMUSG00000004127.13|tRNA methyltransferase 10A	ENSMUST00000161141.2|Trmt10a|ENSMUSG00000004127.13|tRNA methyltransferase 10A
mm39_v1_chr17_+_71326542_71326558	0.43933	Nkx2-2	ENSMUST00000179759.3|Myom1|ENSMUSG00000024049.16|myomesin 1
mm39_v1_chrX_+_105070865_105070899	0.43905	Nkx2-2	ENSMUST00000113557.8|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr8_+_88925821_88925852	0.436111	Nkx2-2	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr18_+_4993795_4993818	0.435152	Nkx2-2	ENSMUST00000153016.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr17_+_40887484_40887484	0.431259	Nkx2-2	ENSMUST00000233672.2|Esp5|ENSMUSG00000117190.2|exocrine gland secreted peptide 5
mm39_v1_chr6_+_3993774_3993792	0.429706	Nkx2-2	ENSMUST00000031673.7|Gngt1|ENSMUSG00000029663.11|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm39_v1_chr18_-_36859732_36859851	0.429482	Nkx2-2	ENSMUST00000061829.8|Cd14|ENSMUSG00000051439.8|CD14 antigen
mm39_v1_chr13_+_38220971_38220971	0.415175	Nkx2-2	ENSMUST00000021866.10|Riok1|ENSMUSG00000021428.10|RIO kinase 1
mm39_v1_chr17_-_15784582_15784622	0.409321	Nkx2-2	ENSMUST00000147532.8|Prdm9|ENSMUSG00000051977.17|PR domain containing 9
mm39_v1_chr6_-_38023925_38023937	0.408081	Nkx2-2	ENSMUST00000096040.11|Svopl|ENSMUSG00000029830.16|SV2 related protein homolog (rat)-like
mm39_v1_chr10_-_13264574_13264714	0.398271	Nkx2-2	ENSMUST00000079698.7|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chrX_+_163763588_163763721	0.388136	Nkx2-2	ENSMUST00000167446.8|Fancb|ENSMUSG00000047757.18|Fanconi anemia, complementation group B	ENSMUST00000057150.8|Fancb|ENSMUSG00000047757.18|Fanconi anemia, complementation group B
mm39_v1_chr8_-_23747023_23747047	0.388084	Nkx2-2	ENSMUST00000121783.7|Golga7|ENSMUSG00000015341.18|golgi autoantigen, golgin subfamily a, 7
mm39_v1_chr17_+_25115461_25115524	0.383535	Nkx2-2	ENSMUST00000024978.7|Nme3|ENSMUSG00000073435.11|NME/NM23 nucleoside diphosphate kinase 3
mm39_v1_chrX_-_154121454_154121482	0.383456	Nkx2-2	ENSMUST00000026328.11|Prdx4|ENSMUSG00000025289.16|peroxiredoxin 4
mm39_v1_chr2_-_88854443_88854443	0.380456	Nkx2-2	ENSMUST00000099799.5|Olfr1217|ENSMUSG00000101391.4|olfactory receptor 1217
mm39_v1_chr16_-_22848153_22848232	0.379755	Nkx2-2	ENSMUST00000232459.2|Kng2|ENSMUSG00000060459.15|kininogen 2
mm39_v1_chr9_+_74883377_74883460	0.374774	Nkx2-2	ENSMUST00000081746.7|Fam214a|ENSMUSG00000034858.17|family with sequence similarity 214, member A
mm39_v1_chr12_+_59176506_59176541	0.369656	Nkx2-2	ENSMUST00000175912.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000176892.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr19_-_6065872_6065927	0.369536	Nkx2-2	ENSMUST00000164843.10|Capn1|ENSMUSG00000024942.20|calpain 1
mm39_v1_chr3_-_153610368_153610368	0.357647	Nkx2-2	ENSMUST00000188338.7|Msh4|ENSMUSG00000005493.16|mutS homolog 4
mm39_v1_chr5_+_91175323_91175351	0.356439	Nkx2-2	ENSMUST00000202724.4|Epgn|ENSMUSG00000035020.12|epithelial mitogen	ENSMUST00000041516.9|Epgn|ENSMUSG00000035020.12|epithelial mitogen
mm39_v1_chr19_+_12651543_12651543	0.3558	Nkx2-2	ENSMUST00000057924.3|Olfr1442|ENSMUSG00000044441.6|olfactory receptor 1442
mm39_v1_chr14_-_24054352_24054367	0.34871	Nkx2-2	ENSMUST00000190339.2|Kcnma1|ENSMUSG00000063142.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
mm39_v1_chr13_-_18556626_18556626	0.34747	Nkx2-2	ENSMUST00000139064.10|Pou6f2|ENSMUSG00000009734.19|POU domain, class 6, transcription factor 2	ENSMUST00000175703.9|Pou6f2|ENSMUSG00000009734.19|POU domain, class 6, transcription factor 2
mm39_v1_chr4_-_11386394_11386539	0.343362	Nkx2-2	ENSMUST00000155519.2|Esrp1|ENSMUSG00000040728.16|epithelial splicing regulatory protein 1
mm39_v1_chr13_+_34148665_34148688	0.334174	Nkx2-2	ENSMUST00000220844.2|Nqo2|ENSMUSG00000046949.17|N-ribosyldihydronicotinamide quinone reductase 2	ENSMUST00000058978.9|Nqo2|ENSMUSG00000046949.17|N-ribosyldihydronicotinamide quinone reductase 2
mm39_v1_chr7_-_43182504_43182580	0.333146	Nkx2-2	ENSMUST00000004728.12|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chr3_-_153610528_153610528	0.321479	Nkx2-2	ENSMUST00000190449.2|Msh4|ENSMUSG00000005493.16|mutS homolog 4
mm39_v1_chr12_+_59176543_59176604	0.319172	Nkx2-2	ENSMUST00000069430.15|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000177370.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr4_+_125918333_125918348	0.318489	Nkx2-2	ENSMUST00000106162.8|Csf3r|ENSMUSG00000028859.15|colony stimulating factor 3 receptor (granulocyte)
mm39_v1_chr7_-_103214484_103214484	0.3126	Nkx2-2	ENSMUST00000106886.2|Olfr616|ENSMUSG00000047544.8|olfactory receptor 616
mm39_v1_chr16_+_4559426_4559452	0.311675	Nkx2-2	ENSMUST00000120232.8|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2
mm39_v1_chr8_+_41692755_41692815	0.306332	Nkx2-2	ENSMUST00000210862.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000045218.9|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000211247.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1
mm39_v1_chr19_-_8109346_8109346	0.297169	Nkx2-2	ENSMUST00000065651.5|Slc22a28|ENSMUSG00000063590.4|solute carrier family 22, member 28
mm39_v1_chr10_-_93727003_93727064	0.295646	Nkx2-2	ENSMUST00000180840.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2
mm39_v1_chr19_-_60770628_60770681	0.285574	Nkx2-2	ENSMUST00000238125.2|Eif3a|ENSMUSG00000024991.9|eukaryotic translation initiation factor 3, subunit A
mm39_v1_chr16_+_14398085_14398085	0.282634	Nkx2-2	ENSMUST00000147024.8|A630010A05Rik|ENSMUSG00000075395.12|RIKEN cDNA A630010A05 gene
mm39_v1_chr6_+_14901439_14901531	0.281669	Nkx2-2	ENSMUST00000128567.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr10_+_126814542_126814618	0.273549	Nkx2-2	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr14_+_54923655_54923695	0.272949	Nkx2-2	ENSMUST00000038539.8|1700123O20Rik|ENSMUSG00000040822.8|RIKEN cDNA 1700123O20 gene	ENSMUST00000228027.2|1700123O20Rik|ENSMUSG00000040822.8|RIKEN cDNA 1700123O20 gene
mm39_v1_chr16_-_58940431_58940431	0.267482	Nkx2-2	ENSMUST00000072608.2|Olfr194|ENSMUSG00000063020.3|olfactory receptor 194
mm39_v1_chr1_-_152262425_152262436	0.262284	Nkx2-2	ENSMUST00000015124.15|Tsen15|ENSMUSG00000014980.15|tRNA splicing endonuclease subunit 15
mm39_v1_chr11_-_97774945_97774980	0.254432	Nkx2-2	ENSMUST00000093939.4|Fbxo47|ENSMUSG00000070336.4|F-box protein 47
mm39_v1_chr7_-_43182595_43182615	0.252851	Nkx2-2	ENSMUST00000205503.2|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chr11_+_115078299_115078393	0.245318	Nkx2-2	ENSMUST00000100235.9|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104	ENSMUST00000061450.7|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104
mm39_v1_chr17_+_15230438_15230438	0.239059	Nkx2-2	ENSMUST00000097395.5|Gm3435|ENSMUSG00000116895.2|predicted gene 3435
mm39_v1_chrX_+_105070907_105070929	0.234303	Nkx2-2	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr2_+_43638814_43638887	0.220727	Nkx2-2	ENSMUST00000112824.8|Arhgap15|ENSMUSG00000049744.16|Rho GTPase activating protein 15	ENSMUST00000055776.8|Arhgap15|ENSMUSG00000049744.16|Rho GTPase activating protein 15
mm39_v1_chr16_-_30102070_30102084	0.218908	Nkx2-2	ENSMUST00000064606.8|Lrrc15|ENSMUSG00000052316.10|leucine rich repeat containing 15
mm39_v1_chr5_+_88073438_88073480	0.217808	Nkx2-2	ENSMUST00000001667.13|Csn3|ENSMUSG00000001622.16|casein kappa	ENSMUST00000113267.8|Csn3|ENSMUSG00000001622.16|casein kappa
mm39_v1_chr2_-_87838612_87838612	0.210544	Nkx2-2	ENSMUST00000215457.2|Olfr1160|ENSMUSG00000075141.6|olfactory receptor 1160
mm39_v1_chr17_-_34847013_34847034	0.21023	Nkx2-2	ENSMUST00000166040.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr7_-_103094646_103094646	0.208236	Nkx2-2	ENSMUST00000215417.2|Olfr605|ENSMUSG00000109659.4|olfactory receptor 605
mm39_v1_chr2_+_110551685_110551836	0.200212	Nkx2-2	ENSMUST00000111016.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr2_+_110551927_110551973	0.190723	Nkx2-2	ENSMUST00000111017.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr9_+_105272507_105272614	0.187919	Nkx2-2	ENSMUST00000035181.10|Aste1|ENSMUSG00000032567.17|asteroid homolog 1	ENSMUST00000123807.8|Aste1|ENSMUSG00000032567.17|asteroid homolog 1
mm39_v1_chr8_+_22448730_22448730	0.187198	Nkx2-2	ENSMUST00000110741.2|Fam90a1a|ENSMUSG00000079112.2|family with sequence similarity 90, member A1A
mm39_v1_chr6_-_56346562_56346587	0.181746	Nkx2-2	ENSMUST00000170774.8|Pde1c|ENSMUSG00000004347.18|phosphodiesterase 1C	ENSMUST00000168944.8|Pde1c|ENSMUSG00000004347.18|phosphodiesterase 1C
mm39_v1_chr18_+_44403169_44403203	0.172541	Nkx2-2	ENSMUST00000042747.4|Npy6r|ENSMUSG00000038071.4|neuropeptide Y receptor Y6
mm39_v1_chr14_+_53491249_53491249	0.168262	Nkx2-2	ENSMUST00000196941.2|Trav13n-2|ENSMUSG00000094779.3|T cell receptor alpha variable 13N-2
mm39_v1_chr11_+_49334680_49334680	0.163643	Nkx2-2	ENSMUST00000055584.2|Olfr1388|ENSMUSG00000047702.3|olfactory receptor 1388
mm39_v1_chr9_+_57986593_57986670	0.149436	Nkx2-2	ENSMUST00000136154.8|Stra6|ENSMUSG00000032327.15|stimulated by retinoic acid gene 6	ENSMUST00000128021.8|Stra6|ENSMUSG00000032327.15|stimulated by retinoic acid gene 6
mm39_v1_chrX_-_8458055_8458055	0.148988	Nkx2-2	ENSMUST00000089374.11|Ssxb3|ENSMUSG00000079701.8|synovial sarcoma, X member B3
mm39_v1_chr11_-_46589646_46589789	0.148773	Nkx2-2	ENSMUST00000109225.9|Timd2|ENSMUSG00000040413.16|T cell immunoglobulin and mucin domain containing 2
mm39_v1_chr14_+_8293646_8293646	0.139928	Nkx2-2	ENSMUST00000035250.6|Olfr720|ENSMUSG00000052417.7|olfactory receptor 720
mm39_v1_chr9_+_30853837_30853858	0.138688	Nkx2-2	ENSMUST00000068135.13|Adamts8|ENSMUSG00000031994.14|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
mm39_v1_chr2_+_88479038_88479038	0.134648	Nkx2-2	ENSMUST00000120518.4|Olfr1192-ps1|ENSMUSG00000111590.3|olfactory receptor 1192, pseudogene 1
mm39_v1_chr14_-_68771138_68771205	0.132352	Nkx2-2	ENSMUST00000022640.8|Adam7|ENSMUSG00000022056.10|a disintegrin and metallopeptidase domain 7
mm39_v1_chr19_+_11863929_11863929	0.130967	Nkx2-2	ENSMUST00000217281.2|Olfr1420|ENSMUSG00000060878.5|olfactory receptor 1420
mm39_v1_chr2_-_89491560_89491560	0.126311	Nkx2-2	ENSMUST00000111527.4|Olfr1250|ENSMUSG00000075078.6|olfactory receptor 1250
mm39_v1_chr9_-_83316656_83316776	0.126027	Nkx2-2	ENSMUST00000186802.2|Lca5|ENSMUSG00000032258.16|Leber congenital amaurosis 5 (human)
mm39_v1_chrX_-_8327965_8327965	0.117238	Nkx2-2	ENSMUST00000103000.9|Ssxb2|ENSMUSG00000023165.14|synovial sarcoma, X member B2	ENSMUST00000023931.4|Ssxb2|ENSMUSG00000023165.14|synovial sarcoma, X member B2
mm39_v1_chr8_-_37420293_37420314	0.115769	Nkx2-2	ENSMUST00000179501.2|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr6_-_42574306_42574346	0.115728	Nkx2-2	ENSMUST00000069023.4|Tcaf3|ENSMUSG00000018656.6|TRPM8 channel-associated factor 3
mm39_v1_chr4_+_43401232_43401293	0.113539	Nkx2-2	ENSMUST00000125399.2|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2
mm39_v1_chrX_+_141608694_141608737	0.112622	Nkx2-2	ENSMUST00000112888.2|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164
mm39_v1_chr5_-_124492734_124492839	0.107461	Nkx2-2	ENSMUST00000031341.11|Cdk2ap1|ENSMUSG00000029394.12|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm39_v1_chr19_-_12098064_12098064	0.106464	Nkx2-2	ENSMUST00000087822.3|Olfr76|ENSMUSG00000067522.4|olfactory receptor 76
mm39_v1_chr1_+_79753735_79753849	0.101422	Nkx2-2	ENSMUST00000027464.9|Mrpl44|ENSMUSG00000026248.10|mitochondrial ribosomal protein L44
mm39_v1_chr17_+_17924009_17924009	0.101261	Nkx2-2	ENSMUST00000169805.3|Vmn2r90|ENSMUSG00000092120.3|vomeronasal 2, receptor 90
mm39_v1_chr17_+_29833760_29833796	0.0952509	Nkx2-2	ENSMUST00000024817.15|Rnf8|ENSMUSG00000090083.12|ring finger protein 8	ENSMUST00000162588.3|Rnf8|ENSMUSG00000090083.12|ring finger protein 8
mm39_v1_chr8_-_26330468_26330490	0.0908113	Nkx2-2	ENSMUST00000110609.8|Ash2l|ENSMUSG00000031575.19|ASH2 like histone lysine methyltransferase complex subunit
mm39_v1_chr6_+_85428464_85428496	0.0881051	Nkx2-2	ENSMUST00000032078.9|Cct7|ENSMUSG00000030007.9|chaperonin containing Tcp1, subunit 7 (eta)
mm39_v1_chr18_-_20135012_20135071	0.0728451	Nkx2-2	ENSMUST00000225110.2|Dsc3|ENSMUSG00000059898.10|desmocollin 3
mm39_v1_chr6_+_40548291_40548291	0.0721363	Nkx2-2	ENSMUST00000051540.5|Olfr460|ENSMUSG00000045514.6|olfactory receptor 460
mm39_v1_chr4_-_107164347_107164366	0.0665947	Nkx2-2	ENSMUST00000082426.11|Dio1|ENSMUSG00000034785.16|deiodinase, iodothyronine, type I
mm39_v1_chr7_+_104228831_104228831	0.0644977	Nkx2-2	ENSMUST00000098174.3|Olfr653|ENSMUSG00000073926.5|olfactory receptor 653
mm39_v1_chr16_-_58647137_58647145	0.0595096	Nkx2-2	ENSMUST00000215069.2|Olfr175|ENSMUSG00000060663.7|olfactory receptor 175	ENSMUST00000079955.6|Olfr175|ENSMUSG00000060663.7|olfactory receptor 175
mm39_v1_chr18_-_20135139_20135161	0.0589368	Nkx2-2	ENSMUST00000115848.5|Dsc3|ENSMUSG00000059898.10|desmocollin 3
mm39_v1_chr1_-_181992051_181992051	0.050446	Nkx2-2	ENSMUST00000227629.2|Vmn1r1|ENSMUSG00000091013.4|vomeronasal 1 receptor 1	ENSMUST00000227586.2|Vmn1r1|ENSMUSG00000091013.4|vomeronasal 1 receptor 1
mm39_v1_chr17_+_28910302_28910316	0.0457206	Nkx2-2	ENSMUST00000004990.14|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114754.8|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000062694.16|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr6_-_85428207_85428265	0.0445193	Nkx2-2	ENSMUST00000113770.2|Pradc1|ENSMUSG00000030008.10|protease-associated domain containing 1	ENSMUST00000032080.9|Pradc1|ENSMUSG00000030008.10|protease-associated domain containing 1
mm39_v1_chr6_+_57009269_57009293	0.0443196	Nkx2-2	ENSMUST00000227706.2|Vmn1r8|ENSMUSG00000061208.7|vomeronasal 1 receptor 8	ENSMUST00000228690.2|Vmn1r8|ENSMUSG00000061208.7|vomeronasal 1 receptor 8
mm39_v1_chr1_-_87936242_87936278	0.0373331	Nkx2-2	ENSMUST00000187758.7|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40	ENSMUST00000040783.11|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40
mm39_v1_chr3_-_57559088_57559148	0.0359176	Nkx2-2	ENSMUST00000160959.8|Commd2|ENSMUSG00000036513.16|COMM domain containing 2
mm39_v1_chr2_+_163503415_163503419	0.0353946	Nkx2-2	ENSMUST00000135537.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr10_+_25317309_25317509	0.0281065	Nkx2-2	ENSMUST00000217929.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000220121.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr7_-_43956326_43956387	0.0252405	Nkx2-2	ENSMUST00000004587.11|Clec11a|ENSMUSG00000004473.11|C-type lectin domain family 11, member a
mm39_v1_chr19_-_37155410_37155454	0.0212442	Nkx2-2	ENSMUST00000133988.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr8_+_91681550_91681688	0.0208777	Nkx2-2	ENSMUST00000210947.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr17_+_71923210_71923254	0.0193204	Nkx2-2	ENSMUST00000047086.10|Wdr43|ENSMUSG00000041057.11|WD repeat domain 43
mm39_v1_chr2_-_26127360_26127537	0.0178052	Nkx2-2	ENSMUST00000036187.9|Qsox2|ENSMUSG00000036327.19|quiescin Q6 sulfhydryl oxidase 2
mm39_v1_chr6_+_88442391_88442477	0.0173501	Nkx2-2	ENSMUST00000032165.16|Ruvbl1|ENSMUSG00000030079.16|RuvB-like protein 1
mm39_v1_chr2_+_139993963_139993963	0.0164927	Nkx2-2	ENSMUST00000104994.3|Gm17374|ENSMUSG00000078197.3|predicted gene, 17374
mm39_v1_chr18_-_20135396_20135418	0.01535	Nkx2-2	ENSMUST00000223946.2|Dsc3|ENSMUSG00000059898.10|desmocollin 3
mm39_v1_chr11_-_57409423_57409469	0.014825	Nkx2-2	ENSMUST00000108850.2|Fam114a2|ENSMUSG00000020523.15|family with sequence similarity 114, member A2	ENSMUST00000020831.13|Fam114a2|ENSMUSG00000020523.15|family with sequence similarity 114, member A2
mm39_v1_chr17_-_34847354_34847484	0.0133825	Nkx2-2	ENSMUST00000167097.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr7_+_107649900_107649900	0.0122963	Nkx2-2	ENSMUST00000214599.2|Olfr479|ENSMUSG00000043855.8|olfactory receptor 479	ENSMUST00000209805.3|Olfr479|ENSMUSG00000043855.8|olfactory receptor 479
mm39_v1_chr6_+_58284253_58284253	0.011211	Nkx2-2	ENSMUST00000168416.2|Vmn1r29|ENSMUSG00000091734.3|vomeronasal 1 receptor 29
mm39_v1_chr11_-_73290321_73290440	0.00460497	Nkx2-2	ENSMUST00000131253.2|Olfr1|ENSMUSG00000069823.12|olfactory receptor 1	ENSMUST00000120303.9|Olfr1|ENSMUSG00000069823.12|olfactory receptor 1
mm39_v1_chr1_-_39616445_39616508	0.00357832	Nkx2-2	ENSMUST00000062525.11|Rnf149|ENSMUSG00000048234.14|ring finger protein 149
mm39_v1_chr10_+_23796254_23796254	0.00235368	Nkx2-2	ENSMUST00000051532.5|Taar1|ENSMUSG00000056379.4|trace amine-associated receptor 1
