mm39_v1_chr17_+_36172210_36172232	12.8132	Pitx2_Otx2	ENSMUST00000074259.15|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)	ENSMUST00000174873.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr9_+_72345267_72345299	12.2871	Pitx2_Otx2	ENSMUST00000183809.8|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1
mm39_v1_chr9_+_110248815_110248930	11.9237	Pitx2_Otx2	ENSMUST00000035061.9|Ngp|ENSMUSG00000032484.9|neutrophilic granule protein
mm39_v1_chr11_-_97886997_97887018	11.9201	Pitx2_Otx2	ENSMUST00000042971.16|Arl5c|ENSMUSG00000038352.16|ADP-ribosylation factor-like 5C
mm39_v1_chr11_-_6470918_6470969	11.2754	Pitx2_Otx2	ENSMUST00000003459.4|Myo1g|ENSMUSG00000020437.13|myosin IG
mm39_v1_chr14_+_52348396_52348410	10.3359	Pitx2_Otx2	ENSMUST00000111600.11|Rpgrip1|ENSMUSG00000057132.17|retinitis pigmentosa GTPase regulator interacting protein 1
mm39_v1_chr4_-_117039809_117039838	10.2564	Pitx2_Otx2	ENSMUST00000065896.9|Kif2c|ENSMUSG00000028678.14|kinesin family member 2C
mm39_v1_chr13_-_22193900_22193919	9.95748	Pitx2_Otx2	ENSMUST00000006341.4|Prss16|ENSMUSG00000006179.10|protease, serine 16 (thymus)
mm39_v1_chr11_+_117673107_117673165	8.52592	Pitx2_Otx2	ENSMUST00000050874.14|Tmc8|ENSMUSG00000050106.19|transmembrane channel-like gene family 8	ENSMUST00000106334.9|Tmc8|ENSMUSG00000050106.19|transmembrane channel-like gene family 8
mm39_v1_chr5_-_76478935_76479008	8.46486	Pitx2_Otx2	ENSMUST00000122213.8|Pdcl2|ENSMUSG00000029235.15|phosducin-like 2	ENSMUST00000031145.7|Pdcl2|ENSMUSG00000029235.15|phosducin-like 2
mm39_v1_chr7_+_46510627_46510669	8.44941	Pitx2_Otx2	ENSMUST00000014545.11|Ldhc|ENSMUSG00000030851.16|lactate dehydrogenase C
mm39_v1_chr17_-_47074617_47074638	8.34674	Pitx2_Otx2	ENSMUST00000041012.9|Ptcra|ENSMUSG00000036858.9|pre T cell antigen receptor alpha
mm39_v1_chr4_-_43483696_43483734	8.00018	Pitx2_Otx2	ENSMUST00000030180.7|Sit1|ENSMUSG00000028460.7|suppression inducing transmembrane adaptor 1
mm39_v1_chr7_+_28140450_28140489	7.98818	Pitx2_Otx2	ENSMUST00000135686.2|Gmfg|ENSMUSG00000060791.16|glia maturation factor, gamma
mm39_v1_chr3_+_98067940_98067976	7.89543	Pitx2_Otx2	ENSMUST00000198363.2|Adam30|ENSMUSG00000043468.5|a disintegrin and metallopeptidase domain 30	ENSMUST00000050342.5|Adam30|ENSMUSG00000043468.5|a disintegrin and metallopeptidase domain 30
mm39_v1_chr6_+_41128636_41128694	7.74126	Pitx2_Otx2	ENSMUST00000103274.4|Trbv16|ENSMUSG00000076473.4|T cell receptor beta, variable 16
mm39_v1_chr9_-_70328816_70328876	7.74108	Pitx2_Otx2	ENSMUST00000034742.8|Ccnb2|ENSMUSG00000032218.8|cyclin B2
mm39_v1_chr17_+_36172235_36172378	7.72606	Pitx2_Otx2	ENSMUST00000172931.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr6_-_88875646_88875762	7.69439	Pitx2_Otx2	ENSMUST00000058011.8|Mcm2|ENSMUSG00000002870.9|minichromosome maintenance complex component 2
mm39_v1_chr7_+_46510677_46510746	7.58677	Pitx2_Otx2	ENSMUST00000211784.2|Ldhc|ENSMUSG00000030851.16|lactate dehydrogenase C	ENSMUST00000210585.2|Ldhc|ENSMUSG00000030851.16|lactate dehydrogenase C	ENSMUST00000148565.8|Ldhc|ENSMUSG00000030851.16|lactate dehydrogenase C
mm39_v1_chr2_+_91376650_91376678	7.44964	Pitx2_Otx2	ENSMUST00000099716.11|Ckap5|ENSMUSG00000040549.17|cytoskeleton associated protein 5	ENSMUST00000046769.16|Ckap5|ENSMUSG00000040549.17|cytoskeleton associated protein 5	ENSMUST00000111337.3|Ckap5|ENSMUSG00000040549.17|cytoskeleton associated protein 5
mm39_v1_chr7_+_28140352_28140370	7.39121	Pitx2_Otx2	ENSMUST00000078845.13|Gmfg|ENSMUSG00000060791.16|glia maturation factor, gamma
mm39_v1_chr5_+_66018555_66018580	7.23386	Pitx2_Otx2	ENSMUST00000031106.8|Rhoh|ENSMUSG00000029204.8|ras homolog family member H
mm39_v1_chr19_+_4204605_4204629	7.01925	Pitx2_Otx2	ENSMUST00000061086.9|Ptprcap|ENSMUSG00000045826.10|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm39_v1_chr17_-_6923299_6923299	6.95431	Pitx2_Otx2	ENSMUST00000179554.3|Dynlt1f|ENSMUSG00000095677.3|dynein light chain Tctex-type 1F
mm39_v1_chr7_+_44358144_44358205	6.93854	Pitx2_Otx2	ENSMUST00000085422.4|Izumo2|ENSMUSG00000066500.6|IZUMO family member 2
mm39_v1_chr7_+_16515265_16515277	6.80631	Pitx2_Otx2	ENSMUST00000108496.9|Slc1a5|ENSMUSG00000001918.18|solute carrier family 1 (neutral amino acid transporter), member 5
mm39_v1_chr5_+_110478558_110478567	6.66187	Pitx2_Otx2	ENSMUST00000112481.2|Pole|ENSMUSG00000007080.15|polymerase (DNA directed), epsilon
mm39_v1_chr5_-_72910106_72910127	6.6026	Pitx2_Otx2	ENSMUST00000197313.5|Txk|ENSMUSG00000054892.15|TXK tyrosine kinase	ENSMUST00000198464.3|Txk|ENSMUSG00000054892.15|TXK tyrosine kinase	ENSMUST00000113604.10|Txk|ENSMUSG00000054892.15|TXK tyrosine kinase
mm39_v1_chr17_+_30845909_30845965	6.5848	Pitx2_Otx2	ENSMUST00000236140.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000236118.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000235390.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr17_+_6697511_6697604	6.57564	Pitx2_Otx2	ENSMUST00000179569.3|Dynlt1b|ENSMUSG00000096255.3|dynein light chain Tctex-type 1B
mm39_v1_chr4_+_116030561_116030581	6.48928	Pitx2_Otx2	ENSMUST00000106492.3|1700042G07Rik|ENSMUSG00000078593.3|RIKEN cDNA 1700042G07 gene	ENSMUST00000216692.2|Gm49337|ENSMUSG00000111410.2|predicted gene, 49337
mm39_v1_chr11_-_69786324_69786386	6.45492	Pitx2_Otx2	ENSMUST00000001631.7|Acap1|ENSMUSG00000001588.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
mm39_v1_chr6_-_124865155_124865184	6.44517	Pitx2_Otx2	ENSMUST00000024044.7|Cd4|ENSMUSG00000023274.15|CD4 antigen
mm39_v1_chr15_-_82128888_82128956	6.39071	Pitx2_Otx2	ENSMUST00000089155.6|Cenpm|ENSMUSG00000068101.12|centromere protein M	ENSMUST00000089157.11|Cenpm|ENSMUSG00000068101.12|centromere protein M
mm39_v1_chr14_+_66043515_66043681	6.26659	Pitx2_Otx2	ENSMUST00000139644.2|Pbk|ENSMUSG00000022033.10|PDZ binding kinase
mm39_v1_chr8_-_106706035_106706083	6.25431	Pitx2_Otx2	ENSMUST00000034371.9|Dpep3|ENSMUSG00000031898.10|dipeptidase 3
mm39_v1_chr14_-_47655621_47655648	6.15702	Pitx2_Otx2	ENSMUST00000180299.8|Dlgap5|ENSMUSG00000037544.15|DLG associated protein 5
mm39_v1_chr4_-_58009118_58009134	6.12539	Pitx2_Otx2	ENSMUST00000102897.11|Txndc8|ENSMUSG00000038709.16|thioredoxin domain containing 8	ENSMUST00000239406.2|Txndc8|ENSMUSG00000038709.16|thioredoxin domain containing 8
mm39_v1_chr17_+_29712008_29712080	6.08042	Pitx2_Otx2	ENSMUST00000234665.2|Pim1|ENSMUSG00000024014.9|proviral integration site 1
mm39_v1_chr3_-_36626101_36626299	6.05518	Pitx2_Otx2	ENSMUST00000029270.10|Ccna2|ENSMUSG00000027715.10|cyclin A2
mm39_v1_chr6_+_41036271_41036328	6.02261	Pitx2_Otx2	ENSMUST00000103265.5|Trbv4|ENSMUSG00000107486.2|T cell receptor beta, variable 10
mm39_v1_chr15_-_99268311_99268389	6.00942	Pitx2_Otx2	ENSMUST00000081224.14|Fmnl3|ENSMUSG00000023008.19|formin-like 3	ENSMUST00000120633.2|Fmnl3|ENSMUSG00000023008.19|formin-like 3	ENSMUST00000088233.13|Fmnl3|ENSMUSG00000023008.19|formin-like 3
mm39_v1_chr7_-_100164007_100164167	5.99778	Pitx2_Otx2	ENSMUST00000207405.2|Dnajb13|ENSMUSG00000030708.15|DnaJ heat shock protein family (Hsp40) member B13
mm39_v1_chr2_+_101455079_101455101	5.99156	Pitx2_Otx2	ENSMUST00000111227.2|Rag2|ENSMUSG00000032864.5|recombination activating gene 2
mm39_v1_chr7_+_43090206_43090257	5.82865	Pitx2_Otx2	ENSMUST00000040227.3|Cldnd2|ENSMUSG00000038973.3|claudin domain containing 2
mm39_v1_chr4_-_117622747_117622845	5.80603	Pitx2_Otx2	ENSMUST00000062747.6|Klf17|ENSMUSG00000048626.6|Kruppel-like factor 17
mm39_v1_chr4_-_149222057_149222086	5.75784	Pitx2_Otx2	ENSMUST00000030813.10|Cenps|ENSMUSG00000073705.11|centromere protein S
mm39_v1_chr15_-_103337982_103337990	5.63768	Pitx2_Otx2	ENSMUST00000146736.8|Gtsf1|ENSMUSG00000022487.15|gametocyte specific factor 1
mm39_v1_chr17_-_29162794_29162814	5.61673	Pitx2_Otx2	ENSMUST00000232977.2|Pxt1|ENSMUSG00000045378.6|peroxisomal, testis specific 1
mm39_v1_chrX_-_9335525_9335571	5.59799	Pitx2_Otx2	ENSMUST00000015484.10|Cybb|ENSMUSG00000015340.11|cytochrome b-245, beta polypeptide
mm39_v1_chr19_+_37364791_37364871	5.59689	Pitx2_Otx2	ENSMUST00000012587.4|Kif11|ENSMUSG00000012443.5|kinesin family member 11
mm39_v1_chr9_+_103182352_103182450	5.58307	Pitx2_Otx2	ENSMUST00000035164.10|Topbp1|ENSMUSG00000032555.11|topoisomerase (DNA) II binding protein 1
mm39_v1_chr12_-_28632514_28632532	5.54278	Pitx2_Otx2	ENSMUST00000110917.2|Allc|ENSMUSG00000020636.15|allantoicase	ENSMUST00000020965.14|Allc|ENSMUSG00000020636.15|allantoicase
mm39_v1_chr3_-_90603013_90603030	5.51095	Pitx2_Otx2	ENSMUST00000069960.12|S100a9|ENSMUSG00000056071.13|S100 calcium binding protein A9 (calgranulin B)	ENSMUST00000117167.2|S100a9|ENSMUSG00000056071.13|S100 calcium binding protein A9 (calgranulin B)
mm39_v1_chr4_+_137180565_137180627	5.49537	Pitx2_Otx2	ENSMUST00000048893.4|1700013G24Rik|ENSMUSG00000041399.4|RIKEN cDNA 1700013G24 gene
mm39_v1_chr6_+_128864549_128864561	5.46008	Pitx2_Otx2	ENSMUST00000032519.12|Clec2i|ENSMUSG00000030365.12|C-type lectin domain family 2, member i	ENSMUST00000159866.8|Clec2i|ENSMUSG00000030365.12|C-type lectin domain family 2, member i	ENSMUST00000162666.4|Clec2i|ENSMUSG00000030365.12|C-type lectin domain family 2, member i	ENSMUST00000160867.3|Clec2i|ENSMUSG00000030365.12|C-type lectin domain family 2, member i
mm39_v1_chr13_-_113237505_113237522	5.44809	Pitx2_Otx2	ENSMUST00000224282.2|Gzma|ENSMUSG00000023132.9|granzyme A	ENSMUST00000023897.7|Gzma|ENSMUSG00000023132.9|granzyme A
mm39_v1_chr9_+_72345801_72345880	5.43521	Pitx2_Otx2	ENSMUST00000184604.8|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1	ENSMUST00000034746.10|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1
mm39_v1_chr5_+_136722995_136723031	5.40401	Pitx2_Otx2	ENSMUST00000197186.2|Myl10|ENSMUSG00000005474.10|myosin, light chain 10, regulatory
mm39_v1_chr19_-_47907705_47907744	5.39765	Pitx2_Otx2	ENSMUST00000095998.7|Itprip|ENSMUSG00000117975.2|inositol 1,4,5-triphosphate receptor interacting protein
mm39_v1_chr2_+_101455022_101455075	5.34853	Pitx2_Otx2	ENSMUST00000044031.4|Rag2|ENSMUSG00000032864.5|recombination activating gene 2
mm39_v1_chr2_-_32278245_32278268	5.34331	Pitx2_Otx2	ENSMUST00000192241.2|Lcn2|ENSMUSG00000026822.15|lipocalin 2
mm39_v1_chr4_-_149221998_149222048	5.34251	Pitx2_Otx2	ENSMUST00000176124.8|Cenps|ENSMUSG00000073705.11|centromere protein S	ENSMUST00000177408.2|Cenps|ENSMUSG00000073705.11|centromere protein S	ENSMUST00000105695.2|Cenps|ENSMUSG00000073705.11|centromere protein S
mm39_v1_chr16_+_36004452_36004582	5.25312	Pitx2_Otx2	ENSMUST00000114858.2|Cstdc4|ENSMUSG00000079597.3|cystatin domain containing 4
mm39_v1_chr10_+_4291193_4291199	5.25155	Pitx2_Otx2	ENSMUST00000239220.2|Akap12|ENSMUSG00000038587.11|A kinase (PRKA) anchor protein (gravin) 12
mm39_v1_chr11_-_106889291_106889318	5.21472	Pitx2_Otx2	ENSMUST00000124541.8|Kpna2|ENSMUSG00000018362.15|karyopherin (importin) alpha 2
mm39_v1_chr7_+_6998299_6998502	5.20439	Pitx2_Otx2	ENSMUST00000208049.2|Aurkc|ENSMUSG00000070837.6|aurora kinase C	ENSMUST00000086248.7|Aurkc|ENSMUSG00000070837.6|aurora kinase C	ENSMUST00000208518.2|Aurkc|ENSMUSG00000070837.6|aurora kinase C	ENSMUST00000207711.2|Aurkc|ENSMUSG00000070837.6|aurora kinase C
mm39_v1_chr1_-_28819331_28819333	5.20046	Pitx2_Otx2	ENSMUST00000059937.5|Gm597|ENSMUSG00000048411.5|predicted gene 597
mm39_v1_chr10_-_60532250_60532270	5.16576	Pitx2_Otx2	ENSMUST00000105464.9|Cdh23|ENSMUSG00000012819.17|cadherin 23 (otocadherin)	ENSMUST00000105463.9|Cdh23|ENSMUSG00000012819.17|cadherin 23 (otocadherin)	ENSMUST00000105461.10|Cdh23|ENSMUSG00000012819.17|cadherin 23 (otocadherin)
mm39_v1_chr11_-_54968901_54968945	5.14543	Pitx2_Otx2	ENSMUST00000055040.13|Ccdc69|ENSMUSG00000049588.14|coiled-coil domain containing 69
mm39_v1_chr5_+_107977965_107978041	5.0404	Pitx2_Otx2	ENSMUST00000072578.8|Ube2d2b|ENSMUSG00000063447.8|ubiquitin-conjugating enzyme E2D 2B
mm39_v1_chr10_-_80374916_80374937	5.03357	Pitx2_Otx2	ENSMUST00000219648.2|Atp8b3|ENSMUSG00000003341.10|ATPase, class I, type 8B, member 3
mm39_v1_chr6_+_41511248_41511275	5.01957	Pitx2_Otx2	ENSMUST00000192366.2|Trbj1-3|ENSMUSG00000076485.3|T cell receptor beta joining 1-3	ENSMUST00000103286.2|Trbj1-3|ENSMUSG00000076485.3|T cell receptor beta joining 1-3
mm39_v1_chr3_+_130906434_130906452	4.99482	Pitx2_Otx2	ENSMUST00000098611.4|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1
mm39_v1_chr9_+_106377181_106377195	4.99297	Pitx2_Otx2	ENSMUST00000085114.8|Iqcf1|ENSMUSG00000066383.8|IQ motif containing F1
mm39_v1_chr9_+_106391771_106391783	4.91885	Pitx2_Otx2	ENSMUST00000085113.5|Iqcf5|ENSMUSG00000066382.5|IQ motif containing F5
mm39_v1_chr11_+_88861073_88861088	4.88997	Pitx2_Otx2	ENSMUST00000107898.8|Coil|ENSMUSG00000033983.15|coilin
mm39_v1_chr5_+_137777111_137777197	4.83564	Pitx2_Otx2	ENSMUST00000126126.8|Ppp1r35|ENSMUSG00000029725.11|protein phosphatase 1, regulatory subunit 35	ENSMUST00000031739.6|Ppp1r35|ENSMUSG00000029725.11|protein phosphatase 1, regulatory subunit 35
mm39_v1_chr1_+_85503397_85503397	4.83087	Pitx2_Otx2	ENSMUST00000178024.2|G530012D18Rik|ENSMUSG00000094127.2|RIKEN cDNA G530012D1 gene
mm39_v1_chrX_+_162923474_162923614	4.8307	Pitx2_Otx2	ENSMUST00000073973.11|Ace2|ENSMUSG00000015405.16|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm39_v1_chr17_-_35407403_35407420	4.82263	Pitx2_Otx2	ENSMUST00000097336.5|Lst1|ENSMUSG00000073412.7|leukocyte specific transcript 1
mm39_v1_chr15_-_76554065_76554148	4.81399	Pitx2_Otx2	ENSMUST00000037824.6|Foxh1|ENSMUSG00000033837.6|forkhead box H1
mm39_v1_chr7_-_126831803_126831826	4.80266	Pitx2_Otx2	ENSMUST00000133913.8|Septin1|ENSMUSG00000000486.14|septin 1
mm39_v1_chr5_-_24760401_24760418	4.75765	Pitx2_Otx2	ENSMUST00000088302.10|Iqca1l|ENSMUSG00000038199.13|IQ motif containing with AAA domain 1 like
mm39_v1_chr7_-_30119227_30119305	4.72903	Pitx2_Otx2	ENSMUST00000208740.2|Hcst|ENSMUSG00000064109.9|hematopoietic cell signal transducer	ENSMUST00000075062.5|Hcst|ENSMUSG00000064109.9|hematopoietic cell signal transducer
mm39_v1_chr16_+_9988080_9988128	4.72831	Pitx2_Otx2	ENSMUST00000121292.8|Rpl39l|ENSMUSG00000039209.13|ribosomal protein L39-like	ENSMUST00000044103.6|Rpl39l|ENSMUSG00000039209.13|ribosomal protein L39-like
mm39_v1_chr1_-_73055043_73055068	4.71558	Pitx2_Otx2	ENSMUST00000027374.7|Tnp1|ENSMUSG00000026182.7|transition protein 1
mm39_v1_chr12_-_66331168_66331186	4.69688	Pitx2_Otx2	ENSMUST00000081908.8|Rpl10l|ENSMUSG00000060499.8|ribosomal protein L10-like
mm39_v1_chr7_+_12246415_12246447	4.69394	Pitx2_Otx2	ENSMUST00000032541.5|2900092C05Rik|ENSMUSG00000030385.5|RIKEN cDNA 2900092C05 gene
mm39_v1_chr6_+_41510925_41510949	4.69149	Pitx2_Otx2	ENSMUST00000103285.2|Trbj1-2|ENSMUSG00000076484.2|T cell receptor beta joining 1-2
mm39_v1_chr16_+_93629009_93629202	4.66357	Pitx2_Otx2	ENSMUST00000044068.10|Morc3|ENSMUSG00000039456.11|microrchidia 3	ENSMUST00000202261.5|Morc3|ENSMUSG00000039456.11|microrchidia 3	ENSMUST00000201097.3|Morc3|ENSMUSG00000039456.11|microrchidia 3
mm39_v1_chr14_+_71011744_71011795	4.59967	Pitx2_Otx2	ENSMUST00000022698.8|Dok2|ENSMUSG00000022102.14|docking protein 2
mm39_v1_chr18_+_57666852_57666954	4.57159	Pitx2_Otx2	ENSMUST00000079738.10|Ccdc192|ENSMUSG00000058925.12|coiled-coil domain containing 192	ENSMUST00000135806.8|Ccdc192|ENSMUSG00000058925.12|coiled-coil domain containing 192	ENSMUST00000127130.9|Ccdc192|ENSMUSG00000058925.12|coiled-coil domain containing 192
mm39_v1_chr6_+_41511733_41511772	4.56947	Pitx2_Otx2	ENSMUST00000103287.2|Trbj1-4|ENSMUSG00000076486.2|T cell receptor beta joining 1-4
mm39_v1_chr17_+_30940015_30940015	4.54662	Pitx2_Otx2	ENSMUST00000236948.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr10_+_75790348_75790382	4.54549	Pitx2_Otx2	ENSMUST00000099577.4|Gm5134|ENSMUSG00000033255.9|predicted gene 5134
mm39_v1_chr10_+_117977822_117977850	4.50255	Pitx2_Otx2	ENSMUST00000164077.9|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1	ENSMUST00000169817.3|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1
mm39_v1_chr14_+_53093071_53093122	4.48535	Pitx2_Otx2	ENSMUST00000181038.3|Trav14d-1|ENSMUSG00000095854.5|T cell receptor alpha variable 14D-1	ENSMUST00000187138.2|Trav14d-1|ENSMUSG00000095854.5|T cell receptor alpha variable 14D-1
mm39_v1_chr15_+_102315579_102315704	4.48369	Pitx2_Otx2	ENSMUST00000169619.2|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr11_+_72205264_72205281	4.45876	Pitx2_Otx2	ENSMUST00000108504.2|Fbxo39|ENSMUSG00000070388.4|F-box protein 39
mm39_v1_chr18_-_74340842_74340861	4.45503	Pitx2_Otx2	ENSMUST00000040188.16|Ska1|ENSMUSG00000036223.17|spindle and kinetochore associated complex subunit 1
mm39_v1_chr11_-_73029070_73029136	4.4446	Pitx2_Otx2	ENSMUST00000052140.3|Haspin|ENSMUSG00000050107.3|histone H3 associated protein kinase
mm39_v1_chr6_+_35154319_35154378	4.44258	Pitx2_Otx2	ENSMUST00000201374.4|Nup205|ENSMUSG00000038759.16|nucleoporin 205	ENSMUST00000043815.16|Nup205|ENSMUSG00000038759.16|nucleoporin 205
mm39_v1_chr19_+_34899752_34899773	4.35531	Pitx2_Otx2	ENSMUST00000087341.7|Kif20b|ENSMUSG00000024795.12|kinesin family member 20B
mm39_v1_chr3_+_30910089_30910158	4.35338	Pitx2_Otx2	ENSMUST00000108261.8|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160	ENSMUST00000108259.8|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160	ENSMUST00000166278.7|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160	ENSMUST00000046748.13|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160	ENSMUST00000194979.6|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160
mm39_v1_chr10_+_20223516_20223606	4.32165	Pitx2_Otx2	ENSMUST00000169712.3|Mtfr2|ENSMUSG00000019992.9|mitochondrial fission regulator 2	ENSMUST00000217608.2|Mtfr2|ENSMUSG00000019992.9|mitochondrial fission regulator 2
mm39_v1_chr16_-_64299511_64299603	4.31343	Pitx2_Otx2	ENSMUST00000089279.5|Csnka2ip|ENSMUSG00000068167.7|casein kinase 2, alpha prime interacting protein
mm39_v1_chr12_-_112824506_112824588	4.3029	Pitx2_Otx2	ENSMUST00000021729.9|Gpr132|ENSMUSG00000021298.9|G protein-coupled receptor 132
mm39_v1_chr19_+_34899778_34899803	4.3023	Pitx2_Otx2	ENSMUST00000223907.2|Kif20b|ENSMUSG00000024795.12|kinesin family member 20B
mm39_v1_chr5_+_138278777_138278825	4.29995	Pitx2_Otx2	ENSMUST00000048028.15|Stag3|ENSMUSG00000036928.15|stromal antigen 3	ENSMUST00000162245.8|Stag3|ENSMUSG00000036928.15|stromal antigen 3	ENSMUST00000161691.2|Stag3|ENSMUSG00000036928.15|stromal antigen 3
mm39_v1_chr10_+_79722081_79722153	4.29878	Pitx2_Otx2	ENSMUST00000046091.7|Elane|ENSMUSG00000020125.8|elastase, neutrophil expressed
mm39_v1_chr9_-_40915858_40915882	4.27058	Pitx2_Otx2	ENSMUST00000188848.8|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule	ENSMUST00000034519.13|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule
mm39_v1_chr6_+_47897410_47897572	4.24479	Pitx2_Otx2	ENSMUST00000009411.9|Zfp212|ENSMUSG00000052763.8|Zinc finger protein 212
mm39_v1_chr3_-_94343874_94343944	4.24194	Pitx2_Otx2	ENSMUST00000204913.3|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000191506.8|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000199678.4|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3
mm39_v1_chr1_+_34537450_34537522	4.19307	Pitx2_Otx2	ENSMUST00000027299.10|Prss39|ENSMUSG00000026125.10|protease, serine 39
mm39_v1_chr14_+_54380308_54380308	4.18836	Pitx2_Otx2	ENSMUST00000196323.2|Trdc|ENSMUSG00000104876.2|T cell receptor delta, constant region
mm39_v1_chr1_-_128520002_128520055	4.18241	Pitx2_Otx2	ENSMUST00000052172.7|Cxcr4|ENSMUSG00000045382.7|chemokine (C-X-C motif) receptor 4	ENSMUST00000142893.2|Cxcr4|ENSMUSG00000045382.7|chemokine (C-X-C motif) receptor 4
mm39_v1_chr17_+_35286293_35286366	4.15997	Pitx2_Otx2	ENSMUST00000173478.2|Ly6g6c|ENSMUSG00000092586.9|lymphocyte antigen 6 complex, locus G6C	ENSMUST00000174876.2|Ly6g6c|ENSMUSG00000092586.9|lymphocyte antigen 6 complex, locus G6C
mm39_v1_chr10_+_61011164_61011179	4.15772	Pitx2_Otx2	ENSMUST00000140456.2|Tbata|ENSMUSG00000020096.22|thymus, brain and testes associated
mm39_v1_chr10_-_75658355_75658383	4.14095	Pitx2_Otx2	ENSMUST00000160211.2|Gstt4|ENSMUSG00000009093.8|glutathione S-transferase, theta 4
mm39_v1_chr17_-_25946370_25946399	4.11609	Pitx2_Otx2	ENSMUST00000170070.3|Chtf18|ENSMUSG00000019214.15|CTF18, chromosome transmission fidelity factor 18	ENSMUST00000048054.14|Chtf18|ENSMUSG00000019214.15|CTF18, chromosome transmission fidelity factor 18
mm39_v1_chr4_+_156194427_156194461	4.10204	Pitx2_Otx2	ENSMUST00000072554.13|9430015G10Rik|ENSMUSG00000059939.14|RIKEN cDNA 9430015G10 gene	ENSMUST00000169550.8|9430015G10Rik|ENSMUSG00000059939.14|RIKEN cDNA 9430015G10 gene	ENSMUST00000105576.2|9430015G10Rik|ENSMUSG00000059939.14|RIKEN cDNA 9430015G10 gene
mm39_v1_chr3_-_36107661_36107696	4.08042	Pitx2_Otx2	ENSMUST00000166644.8|Ccdc144b|ENSMUSG00000047696.17|coiled-coil domain containing 144B	ENSMUST00000200469.5|Ccdc144b|ENSMUSG00000047696.17|coiled-coil domain containing 144B
mm39_v1_chr3_-_90150393_90150450	4.07642	Pitx2_Otx2	ENSMUST00000107369.2|Creb3l4|ENSMUSG00000027938.12|cAMP responsive element binding protein 3-like 4
mm39_v1_chr5_+_93354377_93354377	4.06429	Pitx2_Otx2	ENSMUST00000031330.5|2010109A12Rik|ENSMUSG00000029384.6|RIKEN cDNA 2010109A12 gene
mm39_v1_chr9_-_114325630_114325653	4.05543	Pitx2_Otx2	ENSMUST00000054414.5|Ccr4|ENSMUSG00000047898.8|chemokine (C-C motif) receptor 4
mm39_v1_chr5_-_100720063_100720111	4.01799	Pitx2_Otx2	ENSMUST00000031264.12|Plac8|ENSMUSG00000029322.13|placenta-specific 8
mm39_v1_chr19_-_5444413_5444431	4.01587	Pitx2_Otx2	ENSMUST00000044527.5|Tsga10ip|ENSMUSG00000039330.6|testis specific 10 interacting protein
mm39_v1_chr6_+_41512480_41512576	4.00794	Pitx2_Otx2	ENSMUST00000103289.2|Trbj1-6|ENSMUSG00000076488.2|T cell receptor beta joining 1-6	ENSMUST00000103290.2|Trbj1-7|ENSMUSG00000076489.3|T cell receptor beta joining 1-7	ENSMUST00000193061.2|Trbj1-7|ENSMUSG00000076489.3|T cell receptor beta joining 1-7
mm39_v1_chr11_-_54968947_54968977	3.99379	Pitx2_Otx2	ENSMUST00000108880.2|Ccdc69|ENSMUSG00000049588.14|coiled-coil domain containing 69
mm39_v1_chr10_-_80374941_80374963	3.97805	Pitx2_Otx2	ENSMUST00000020383.6|Atp8b3|ENSMUSG00000003341.10|ATPase, class I, type 8B, member 3
mm39_v1_chr11_+_117672902_117672957	3.97401	Pitx2_Otx2	ENSMUST00000127080.9|Tmc8|ENSMUSG00000050106.19|transmembrane channel-like gene family 8
mm39_v1_chr12_+_71184614_71184614	3.97072	Pitx2_Otx2	ENSMUST00000045907.16|2700049A03Rik|ENSMUSG00000034601.18|RIKEN cDNA 2700049A03 gene
mm39_v1_chr8_+_85628557_85628621	3.95927	Pitx2_Otx2	ENSMUST00000067060.10|Klf1|ENSMUSG00000054191.10|Kruppel-like factor 1 (erythroid)	ENSMUST00000239392.2|Klf1|ENSMUSG00000054191.10|Kruppel-like factor 1 (erythroid)
mm39_v1_chr14_+_51366512_51366529	3.94431	Pitx2_Otx2	ENSMUST00000095923.4|Rnase6|ENSMUSG00000021880.8|ribonuclease, RNase A family, 6
mm39_v1_chr11_-_102815910_102815956	3.9402	Pitx2_Otx2	ENSMUST00000021311.10|Kif18b|ENSMUSG00000051378.11|kinesin family member 18B
mm39_v1_chr1_-_156168522_156168530	3.93902	Pitx2_Otx2	ENSMUST00000212747.2|Axdnd1|ENSMUSG00000026601.15|axonemal dynein light chain domain containing 1
mm39_v1_chr5_-_143831842_143831894	3.93703	Pitx2_Otx2	ENSMUST00000079624.12|Ankrd61|ENSMUSG00000029607.15|ankyrin repeat domain 61	ENSMUST00000110717.9|Ankrd61|ENSMUSG00000029607.15|ankyrin repeat domain 61
mm39_v1_chr6_+_72521374_72521520	3.93652	Pitx2_Otx2	ENSMUST00000071044.13|Capg|ENSMUSG00000056737.15|capping protein (actin filament), gelsolin-like	ENSMUST00000114072.8|Capg|ENSMUSG00000056737.15|capping protein (actin filament), gelsolin-like
mm39_v1_chr4_+_130640436_130640597	3.91986	Pitx2_Otx2	ENSMUST00000151698.8|Laptm5|ENSMUSG00000028581.18|lysosomal-associated protein transmembrane 5
mm39_v1_chr17_+_6869070_6869070	3.91568	Pitx2_Otx2	ENSMUST00000092966.5|Dynlt1c|ENSMUSG00000000579.15|dynein light chain Tctex-type 1C
mm39_v1_chr3_+_105778174_105778229	3.89683	Pitx2_Otx2	ENSMUST00000164730.2|Adora3|ENSMUSG00000000562.6|adenosine A3 receptor	ENSMUST00000010279.10|Tmigd3|ENSMUSG00000074344.8|transmembrane and immunoglobulin domain containing 3
mm39_v1_chr9_+_21437440_21437503	3.89393	Pitx2_Otx2	ENSMUST00000086361.12|AB124611|ENSMUSG00000057191.14|cDNA sequence AB124611	ENSMUST00000173769.3|AB124611|ENSMUSG00000057191.14|cDNA sequence AB124611
mm39_v1_chr16_+_8498618_8498657	3.85062	Pitx2_Otx2	ENSMUST00000201722.2|Gm5767|ENSMUSG00000107252.2|predicted gene 5767
mm39_v1_chr5_-_8472582_8472693	3.84129	Pitx2_Otx2	ENSMUST00000168500.8|Dbf4|ENSMUSG00000002297.17|DBF4 zinc finger	ENSMUST00000002368.16|Dbf4|ENSMUSG00000002297.17|DBF4 zinc finger
mm39_v1_chr1_-_134477400_134477425	3.83207	Pitx2_Otx2	ENSMUST00000172898.2|Mgat4e|ENSMUSG00000046367.11|MGAT4 family, member E
mm39_v1_chr3_-_105839980_105839996	3.82102	Pitx2_Otx2	ENSMUST00000098758.5|I830077J02Rik|ENSMUSG00000074342.5|RIKEN cDNA I830077J02 gene
mm39_v1_chr5_+_134611544_134611639	3.80606	Pitx2_Otx2	ENSMUST00000023867.8|Rfc2|ENSMUSG00000023104.10|replication factor C (activator 1) 2
mm39_v1_chr19_+_6234392_6234497	3.79543	Pitx2_Otx2	ENSMUST00000025699.9|Majin|ENSMUSG00000024786.10|membrane anchored junction protein	ENSMUST00000113528.2|Majin|ENSMUSG00000024786.10|membrane anchored junction protein
mm39_v1_chr13_-_12535236_12535319	3.75806	Pitx2_Otx2	ENSMUST00000179308.3|Edaradd|ENSMUSG00000095105.3|EDAR (ectodysplasin-A receptor)-associated death domain
mm39_v1_chr7_-_30371021_30371043	3.75546	Pitx2_Otx2	ENSMUST00000051495.7|Pmis2|ENSMUSG00000049761.7|PMIS2 transmembrane protein
mm39_v1_chr7_-_45173193_45173397	3.7411	Pitx2_Otx2	ENSMUST00000211212.2|Ppp1r15a|ENSMUSG00000040435.13|protein phosphatase 1, regulatory subunit 15A
mm39_v1_chr1_+_190769010_190769021	3.73613	Pitx2_Otx2	ENSMUST00000077889.8|Spata45|ENSMUSG00000057072.12|spermatogenesis associated 45
mm39_v1_chr9_-_7873017_7873046	3.72779	Pitx2_Otx2	ENSMUST00000013949.15|Birc3|ENSMUSG00000032000.18|baculoviral IAP repeat-containing 3
mm39_v1_chr2_-_162929732_162929775	3.70579	Pitx2_Otx2	ENSMUST00000094653.6|Gtsf1l|ENSMUSG00000070708.6|gametocyte specific factor 1-like
mm39_v1_chr15_-_97618982_97619051	3.69769	Pitx2_Otx2	ENSMUST00000023105.5|Endou|ENSMUSG00000022468.13|endonuclease, polyU-specific
mm39_v1_chr6_+_41107047_41107081	3.68798	Pitx2_Otx2	ENSMUST00000103271.2|Trbv13-3|ENSMUSG00000076470.2|T cell receptor beta, variable 13-3
mm39_v1_chr15_-_98816012_98816112	3.68407	Pitx2_Otx2	ENSMUST00000023736.10|Lmbr1l|ENSMUSG00000022999.16|limb region 1 like
mm39_v1_chr4_+_138503046_138503095	3.67935	Pitx2_Otx2	ENSMUST00000030528.9|Pla2g2d|ENSMUSG00000041202.13|phospholipase A2, group IID
mm39_v1_chr9_+_107869662_107869721	3.6664	Pitx2_Otx2	ENSMUST00000177173.8|Cdhr4|ENSMUSG00000032595.11|cadherin-related family member 4
mm39_v1_chr17_+_35643818_35643847	3.63858	Pitx2_Otx2	ENSMUST00000174699.8|H2-Q6|ENSMUSG00000073409.13|histocompatibility 2, Q region locus 6
mm39_v1_chr3_-_95148909_95148909	3.63092	Pitx2_Otx2	ENSMUST00000090815.6|Gm128|ENSMUSG00000068860.6|predicted gene 128	ENSMUST00000107197.2|Gm128|ENSMUSG00000068860.6|predicted gene 128
mm39_v1_chr14_+_31888061_31888081	3.60703	Pitx2_Otx2	ENSMUST00000164341.2|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4
mm39_v1_chr10_+_128073900_128073935	3.60247	Pitx2_Otx2	ENSMUST00000105245.3|Timeless|ENSMUSG00000039994.16|timeless circadian clock 1
mm39_v1_chrX_+_41591410_41591439	3.59532	Pitx2_Otx2	ENSMUST00000005839.11|Sh2d1a|ENSMUSG00000005696.12|SH2 domain containing 1A
mm39_v1_chr4_+_132903646_132903682	3.58982	Pitx2_Otx2	ENSMUST00000105912.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr8_+_70285133_70285184	3.58928	Pitx2_Otx2	ENSMUST00000081503.13|Pbx4|ENSMUSG00000031860.18|pre B cell leukemia homeobox 4
mm39_v1_chr5_+_3621673_3621692	3.57955	Pitx2_Otx2	ENSMUST00000008451.12|1700109H08Rik|ENSMUSG00000008307.12|RIKEN cDNA 1700109H08 gene
mm39_v1_chr15_-_36598263_36598346	3.57761	Pitx2_Otx2	ENSMUST00000155116.2|Pabpc1|ENSMUSG00000022283.16|poly(A) binding protein, cytoplasmic 1
mm39_v1_chr2_+_79538124_79538271	3.57485	Pitx2_Otx2	ENSMUST00000090760.9|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C	ENSMUST00000040863.11|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C	ENSMUST00000111780.3|Ppp1r1c|ENSMUSG00000034683.13|protein phosphatase 1, regulatory inhibitor subunit 1C
mm39_v1_chr9_-_78350486_78350545	3.57439	Pitx2_Otx2	ENSMUST00000070742.14|Cgas|ENSMUSG00000032344.18|cyclic GMP-AMP synthase	ENSMUST00000034898.14|Cgas|ENSMUSG00000032344.18|cyclic GMP-AMP synthase
mm39_v1_chr14_-_20546848_20546969	3.55355	Pitx2_Otx2	ENSMUST00000022353.5|Mss51|ENSMUSG00000021815.5|MSS51 mitochondrial translational activator
mm39_v1_chr13_+_19528728_19528728	3.51909	Pitx2_Otx2	ENSMUST00000179181.3|Trgc4|ENSMUSG00000076757.10|T cell receptor gamma, constant 4
mm39_v1_chr13_-_120677483_120677483	3.50637	Pitx2_Otx2	ENSMUST00000225881.2|Gm21762|ENSMUSG00000094027.3|predicted gene, 21762
mm39_v1_chr17_-_35984625_35984643	3.49942	Pitx2_Otx2	ENSMUST00000001565.15|Gtf2h4|ENSMUSG00000001524.15|general transcription factor II H, polypeptide 4
mm39_v1_chr5_-_134485430_134485653	3.49853	Pitx2_Otx2	ENSMUST00000200944.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202280.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000074114.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100654.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100650.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000111245.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202554.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000073161.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100652.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000171794.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000167084.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1
mm39_v1_chr7_-_24997291_24997383	3.4919	Pitx2_Otx2	ENSMUST00000148150.8|Pafah1b3|ENSMUSG00000005447.13|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	ENSMUST00000155118.2|Pafah1b3|ENSMUSG00000005447.13|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm39_v1_chr18_+_35932894_35933005	3.48795	Pitx2_Otx2	ENSMUST00000236484.2|Ube2d2a|ENSMUSG00000091896.9|ubiquitin-conjugating enzyme E2D 2A	ENSMUST00000235919.2|Gm50371|ENSMUSG00000117841.2|predicted gene, 50371	ENSMUST00000236550.2|Ube2d2a|ENSMUSG00000091896.9|ubiquitin-conjugating enzyme E2D 2A
mm39_v1_chr3_+_134947971_134948015	3.4713	Pitx2_Otx2	ENSMUST00000197369.3|Cenpe|ENSMUSG00000045328.12|centromere protein E
mm39_v1_chr10_+_128583734_128583765	3.46911	Pitx2_Otx2	ENSMUST00000163377.10|Pym1|ENSMUSG00000064030.16|PYM homolog 1, exon junction complex associated factor
mm39_v1_chr10_+_80128248_80128479	3.46387	Pitx2_Otx2	ENSMUST00000068408.14|Rps15|ENSMUSG00000063457.15|ribosomal protein S15	ENSMUST00000062674.7|Rps15|ENSMUSG00000063457.15|ribosomal protein S15
mm39_v1_chr16_-_10613991_10614016	3.46199	Pitx2_Otx2	ENSMUST00000189593.2|Prm2|ENSMUSG00000038015.7|protamine 2
mm39_v1_chr2_-_126342551_126342596	3.45563	Pitx2_Otx2	ENSMUST00000129187.2|Atp8b4|ENSMUSG00000060131.12|ATPase, class I, type 8B, member 4
mm39_v1_chr11_+_117673198_117673211	3.45113	Pitx2_Otx2	ENSMUST00000117781.8|Tmc8|ENSMUSG00000050106.19|transmembrane channel-like gene family 8
mm39_v1_chr6_+_28427788_28427914	3.43987	Pitx2_Otx2	ENSMUST00000031719.7|Fscn3|ENSMUSG00000029707.7|fascin actin-bundling protein 3
mm39_v1_chr9_+_21231994_21232102	3.43929	Pitx2_Otx2	ENSMUST00000217461.2|Slc44a2|ENSMUSG00000057193.9|solute carrier family 44, member 2
mm39_v1_chr6_-_125168637_125168664	3.43858	Pitx2_Otx2	ENSMUST00000043848.11|Ncapd2|ENSMUSG00000038252.14|non-SMC condensin I complex, subunit D2
mm39_v1_chr8_-_11685726_11685769	3.43101	Pitx2_Otx2	ENSMUST00000033905.13|Ankrd10|ENSMUSG00000031508.15|ankyrin repeat domain 10	ENSMUST00000169782.3|Ankrd10|ENSMUSG00000031508.15|ankyrin repeat domain 10
mm39_v1_chr6_+_68414401_68414437	3.42852	Pitx2_Otx2	ENSMUST00000103324.3|Igkv15-103|ENSMUSG00000076523.3|immunoglobulin kappa chain variable 15-103
mm39_v1_chr11_-_32150222_32150271	3.40192	Pitx2_Otx2	ENSMUST00000145401.8|Il9r|ENSMUSG00000020279.11|interleukin 9 receptor	ENSMUST00000142396.2|Il9r|ENSMUSG00000020279.11|interleukin 9 receptor	ENSMUST00000128311.8|Il9r|ENSMUSG00000020279.11|interleukin 9 receptor
mm39_v1_chr17_-_29161229_29161243	3.38773	Pitx2_Otx2	ENSMUST00000051526.6|Pxt1|ENSMUSG00000045378.6|peroxisomal, testis specific 1	ENSMUST00000233413.2|Pxt1|ENSMUSG00000045378.6|peroxisomal, testis specific 1
mm39_v1_chr9_-_114811807_114811811	3.36506	Pitx2_Otx2	ENSMUST00000053150.8|Rps27rt|ENSMUSG00000050621.8|ribosomal protein S27, retrogene
mm39_v1_chr6_+_70675416_70675434	3.36135	Pitx2_Otx2	ENSMUST00000103403.3|Igkv3-2|ENSMUSG00000095351.3|immunoglobulin kappa variable 3-2
mm39_v1_chr13_+_38224201_38224201	3.35462	Pitx2_Otx2	ENSMUST00000224956.2|Riok1|ENSMUSG00000021428.10|RIO kinase 1
mm39_v1_chr9_+_21249118_21249155	3.3536	Pitx2_Otx2	ENSMUST00000034697.8|Slc44a2|ENSMUSG00000057193.9|solute carrier family 44, member 2
mm39_v1_chr6_-_113577606_113577676	3.35324	Pitx2_Otx2	ENSMUST00000035870.5|Fancd2os|ENSMUSG00000033963.17|Fancd2 opposite strand
mm39_v1_chr8_-_43594523_43594543	3.33735	Pitx2_Otx2	ENSMUST00000059692.4|Triml1|ENSMUSG00000031651.6|tripartite motif family-like 1
mm39_v1_chr6_+_145561483_145561493	3.32814	Pitx2_Otx2	ENSMUST00000087445.7|Tuba3b|ENSMUSG00000067338.7|tubulin, alpha 3B
mm39_v1_chrX_-_7956682_7956744	3.32004	Pitx2_Otx2	ENSMUST00000033505.7|Was|ENSMUSG00000031165.7|Wiskott-Aldrich syndrome
mm39_v1_chr18_+_89195089_89195152	3.31749	Pitx2_Otx2	ENSMUST00000236644.2|Cd226|ENSMUSG00000034028.17|CD226 antigen	ENSMUST00000236828.2|Cd226|ENSMUSG00000034028.17|CD226 antigen
mm39_v1_chr6_-_40917431_40917491	3.31513	Pitx2_Otx2	ENSMUST00000122181.8|1700074P13Rik|ENSMUSG00000029883.13|RIKEN cDNA 1700074P13 gene	ENSMUST00000031935.10|1700074P13Rik|ENSMUSG00000029883.13|RIKEN cDNA 1700074P13 gene
mm39_v1_chr5_-_8472696_8472727	3.29341	Pitx2_Otx2	ENSMUST00000171808.8|Dbf4|ENSMUSG00000002297.17|DBF4 zinc finger
mm39_v1_chr7_-_24997393_24997425	3.28613	Pitx2_Otx2	ENSMUST00000005583.12|Pafah1b3|ENSMUSG00000005447.13|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm39_v1_chr11_+_68936457_68936539	3.28497	Pitx2_Otx2	ENSMUST00000108666.8|Aurkb|ENSMUSG00000020897.13|aurora kinase B	ENSMUST00000021277.6|Aurkb|ENSMUSG00000020897.13|aurora kinase B
mm39_v1_chr2_-_25104628_25104650	3.28083	Pitx2_Otx2	ENSMUST00000043774.11|Stpg3|ENSMUSG00000036770.12|sperm tail PG rich repeat containing 3	ENSMUST00000114363.2|Stpg3|ENSMUSG00000036770.12|sperm tail PG rich repeat containing 3
mm39_v1_chr1_+_85945790_85945806	3.27982	Pitx2_Otx2	ENSMUST00000149469.3|Spata3|ENSMUSG00000026226.17|spermatogenesis associated 3
mm39_v1_chr9_+_106377153_106377173	3.27822	Pitx2_Otx2	ENSMUST00000164965.3|Iqcf1|ENSMUSG00000066383.8|IQ motif containing F1
mm39_v1_chr2_-_112089627_112089656	3.2647	Pitx2_Otx2	ENSMUST00000043970.2|Nutm1|ENSMUSG00000041358.2|NUT midline carcinoma, family member 1
mm39_v1_chr11_-_69652789_69652798	3.26119	Pitx2_Otx2	ENSMUST00000102586.5|Slc35g3|ENSMUSG00000018776.11|solute carrier family 35, member G3
mm39_v1_chr2_-_25705851_25705871	3.25277	Pitx2_Otx2	ENSMUST00000038010.5|Glt6d1|ENSMUSG00000036401.6|glycosyltransferase 6 domain containing 1
mm39_v1_chr1_-_171476495_171476556	3.24654	Pitx2_Otx2	ENSMUST00000194791.2|Slamf7|ENSMUSG00000038179.14|SLAM family member 7	ENSMUST00000192024.6|Slamf7|ENSMUSG00000038179.14|SLAM family member 7
mm39_v1_chr6_-_120334382_120334396	3.24275	Pitx2_Otx2	ENSMUST00000032283.12|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr7_+_45163142_45163170	3.22997	Pitx2_Otx2	ENSMUST00000024233.15|Tulp2|ENSMUSG00000023467.19|tubby-like protein 2
mm39_v1_chr6_+_41510788_41510814	3.21783	Pitx2_Otx2	ENSMUST00000103284.2|Trbj1-1|ENSMUSG00000076483.2|T cell receptor beta joining 1-1
mm39_v1_chr3_-_96721829_96721853	3.20624	Pitx2_Otx2	ENSMUST00000047702.8|Cd160|ENSMUSG00000038304.15|CD160 antigen
mm39_v1_chr6_+_41512010_41512032	3.20518	Pitx2_Otx2	ENSMUST00000103288.2|Trbj1-5|ENSMUSG00000076487.2|T cell receptor beta joining 1-5
mm39_v1_chr17_-_40519480_40519531	3.18578	Pitx2_Otx2	ENSMUST00000033585.7|Pgk2|ENSMUSG00000031233.7|phosphoglycerate kinase 2
mm39_v1_chr16_-_8610165_8610190	3.17989	Pitx2_Otx2	ENSMUST00000160405.8|Usp7|ENSMUSG00000022710.18|ubiquitin specific peptidase 7
mm39_v1_chr11_-_32477551_32477579	3.17901	Pitx2_Otx2	ENSMUST00000054327.3|Efcab9|ENSMUSG00000044056.4|EF-hand calcium binding domain 9
mm39_v1_chr16_+_17093941_17093941	3.17539	Pitx2_Otx2	ENSMUST00000164950.11|Tmem191c|ENSMUSG00000055692.22|transmembrane protein 191C
mm39_v1_chr10_+_88295431_88295477	3.16713	Pitx2_Otx2	ENSMUST00000020252.10|Sycp3|ENSMUSG00000020059.10|synaptonemal complex protein 3
mm39_v1_chr17_+_34482183_34482230	3.14804	Pitx2_Otx2	ENSMUST00000040828.7|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237342.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237866.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1
mm39_v1_chr15_+_81872036_81872049	3.13824	Pitx2_Otx2	ENSMUST00000165777.8|Xrcc6|ENSMUSG00000022471.15|X-ray repair complementing defective repair in Chinese hamster cells 6
mm39_v1_chr12_-_104964936_104964967	3.1305	Pitx2_Otx2	ENSMUST00000109927.2|Syne3|ENSMUSG00000054150.13|spectrin repeat containing, nuclear envelope family member 3	ENSMUST00000095439.11|Syne3|ENSMUSG00000054150.13|spectrin repeat containing, nuclear envelope family member 3
mm39_v1_chrX_+_8137881_8138029	3.12774	Pitx2_Otx2	ENSMUST00000115590.2|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5
mm39_v1_chr7_-_128019874_128019916	3.12138	Pitx2_Otx2	ENSMUST00000145739.3|Rgs10|ENSMUSG00000030844.12|regulator of G-protein signalling 10	ENSMUST00000033133.12|Rgs10|ENSMUSG00000030844.12|regulator of G-protein signalling 10
mm39_v1_chr10_+_127159609_127159650	3.11733	Pitx2_Otx2	ENSMUST00000069548.7|Arhgap9|ENSMUSG00000040345.11|Rho GTPase activating protein 9
mm39_v1_chr10_+_127159568_127159608	3.11572	Pitx2_Otx2	ENSMUST00000219026.2|Arhgap9|ENSMUSG00000040345.11|Rho GTPase activating protein 9
mm39_v1_chr3_+_30910163_30910292	3.11192	Pitx2_Otx2	ENSMUST00000108258.8|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160	ENSMUST00000147697.2|Gpr160|ENSMUSG00000037661.15|G protein-coupled receptor 160
mm39_v1_chr7_+_67925718_67925773	3.1048	Pitx2_Otx2	ENSMUST00000210558.2|Fam169b|ENSMUSG00000074071.12|family with sequence similarity 169, member B
mm39_v1_chr8_-_84996976_84997035	3.10362	Pitx2_Otx2	ENSMUST00000005120.12|Ccdc130|ENSMUSG00000004994.13|coiled-coil domain containing 130	ENSMUST00000163993.2|Ccdc130|ENSMUSG00000004994.13|coiled-coil domain containing 130	ENSMUST00000098578.10|Ccdc130|ENSMUSG00000004994.13|coiled-coil domain containing 130
mm39_v1_chr9_-_106438798_106438833	3.0993	Pitx2_Otx2	ENSMUST00010126732.2|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3	ENSMUST00010126033.2|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3	ENSMUST00000062917.16|ENSMUSG00000118396.3|ENSMUSG00000118396.3|IQ motif containing F3	ENSMUST00010181659.1|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3	ENSMUST00010126065.2|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3	ENSMUST00010126032.3|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3
mm39_v1_chr5_+_3393893_3393945	3.09817	Pitx2_Otx2	ENSMUST00000165117.8|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6	ENSMUST00000197385.2|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6
mm39_v1_chr10_+_62782786_62782854	3.09401	Pitx2_Otx2	ENSMUST00000131422.8|Dna2|ENSMUSG00000036875.16|DNA replication helicase/nuclease 2
mm39_v1_chr17_-_57348647_57348662	3.08472	Pitx2_Otx2	ENSMUST00000169012.2|Slc25a41|ENSMUSG00000011486.15|solute carrier family 25, member 41	ENSMUST00000058661.14|Slc25a41|ENSMUSG00000011486.15|solute carrier family 25, member 41
mm39_v1_chr17_-_35304582_35304594	3.08243	Pitx2_Otx2	ENSMUST00000038507.7|Ly6g6f|ENSMUSG00000034923.10|lymphocyte antigen 6 complex, locus G6F
mm39_v1_chr7_+_141027763_141027817	3.06639	Pitx2_Otx2	ENSMUST00000106003.2|Rplp2|ENSMUSG00000025508.14|ribosomal protein, large P2
mm39_v1_chr7_-_103792462_103792512	3.05055	Pitx2_Otx2	ENSMUST00000057254.6|Ubqln3|ENSMUSG00000051618.6|ubiquilin 3
mm39_v1_chr13_+_68011442_68011447	3.0281	Pitx2_Otx2	ENSMUST00000078471.7|BC048507|ENSMUSG00000064063.7|cDNA sequence BC048507
mm39_v1_chr15_-_89310060_89310075	3.02729	Pitx2_Otx2	ENSMUST00000109313.9|Cpt1b|ENSMUSG00000078937.9|carnitine palmitoyltransferase 1b, muscle
mm39_v1_chr11_-_115918784_115918826	3.00254	Pitx2_Otx2	ENSMUST00000106454.8|H3f3b|ENSMUSG00000016559.15|H3.3 histone B
mm39_v1_chr16_+_31998588_31998677	2.99658	Pitx2_Otx2	ENSMUST00000231941.2|Bex6|ENSMUSG00000075269.6|brain expressed family member 6
mm39_v1_chr3_+_135053762_135053857	2.96453	Pitx2_Otx2	ENSMUST00000159658.8|Slc9b1|ENSMUSG00000050150.17|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1	ENSMUST00000078568.12|Slc9b1|ENSMUSG00000050150.17|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
mm39_v1_chr5_+_90638580_90638627	2.96131	Pitx2_Otx2	ENSMUST00000042755.7|Afp|ENSMUSG00000054932.7|alpha fetoprotein	ENSMUST00000200693.2|Afp|ENSMUSG00000054932.7|alpha fetoprotein
mm39_v1_chr11_-_83177548_83177555	2.94799	Pitx2_Otx2	ENSMUST00000163961.3|Slfn14|ENSMUSG00000082101.4|schlafen 14
mm39_v1_chr4_-_116485118_116485153	2.94459	Pitx2_Otx2	ENSMUST00000030456.14|Nasp|ENSMUSG00000028693.16|nuclear autoantigenic sperm protein (histone-binding)
mm39_v1_chr7_+_139827152_139827294	2.94442	Pitx2_Otx2	ENSMUST00000164583.8|Scart2|ENSMUSG00000054672.14|scavenger receptor family member expressed on T cells 2	ENSMUST00000093984.3|Scart2|ENSMUSG00000054672.14|scavenger receptor family member expressed on T cells 2
mm39_v1_chr17_-_13128768_13128783	2.9377	Pitx2_Otx2	ENSMUST00000232982.2|Pnldc1|ENSMUSG00000073460.6|poly(A)-specific ribonuclease (PARN)-like domain containing 1
mm39_v1_chr7_+_28834276_28834323	2.93232	Pitx2_Otx2	ENSMUST00000161522.8|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000204845.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000205027.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000204194.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000203070.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000203380.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4
mm39_v1_chr10_+_7543260_7543322	2.92747	Pitx2_Otx2	ENSMUST00000040135.9|Nup43|ENSMUSG00000040034.16|nucleoporin 43
mm39_v1_chr2_+_158344553_158344618	2.92596	Pitx2_Otx2	ENSMUST00000109484.2|Adig|ENSMUSG00000044405.5|adipogenin
mm39_v1_chr7_-_126391657_126391711	2.92395	Pitx2_Otx2	ENSMUST00000032936.8|Ppp4c|ENSMUSG00000030697.8|protein phosphatase 4, catalytic subunit
mm39_v1_chr1_-_130350746_130350801	2.91295	Pitx2_Otx2	ENSMUST00000112488.9|Cd55b|ENSMUSG00000026401.16|CD55 molecule, decay accelerating factor for complement B	ENSMUST00000119432.2|Cd55b|ENSMUSG00000026401.16|CD55 molecule, decay accelerating factor for complement B
mm39_v1_chr10_+_4296806_4296873	2.91258	Pitx2_Otx2	ENSMUST00000216139.3|Akap12|ENSMUSG00000038587.11|A kinase (PRKA) anchor protein (gravin) 12
mm39_v1_chr11_+_116739727_116739727	2.90905	Pitx2_Otx2	ENSMUST00000143184.2|Mettl23|ENSMUSG00000090266.11|methyltransferase like 23
mm39_v1_chr11_+_115366470_115366553	2.90471	Pitx2_Otx2	ENSMUST00000035240.7|Armc7|ENSMUSG00000057219.12|armadillo repeat containing 7
mm39_v1_chr7_-_110581652_110581675	2.90026	Pitx2_Otx2	ENSMUST00000005751.13|Irag1|ENSMUSG00000005611.16|inositol 1,4,5-triphosphate receptor associated 1
mm39_v1_chr1_-_171476559_171476580	2.8792	Pitx2_Otx2	ENSMUST00000111276.9|Slamf7|ENSMUSG00000038179.14|SLAM family member 7	ENSMUST00000194531.6|Slamf7|ENSMUSG00000038179.14|SLAM family member 7
mm39_v1_chr2_-_110983281_110983281	2.87848	Pitx2_Otx2	ENSMUST00000132464.2|Gm15130|ENSMUSG00000079169.4|predicted gene 15130
mm39_v1_chr8_-_106434565_106434565	2.8775	Pitx2_Otx2	ENSMUST00000013299.11|Enkd1|ENSMUSG00000013155.11|enkurin domain containing 1
mm39_v1_chr11_-_86999481_86999545	2.86914	Pitx2_Otx2	ENSMUST00000051395.9|Prr11|ENSMUSG00000020493.9|proline rich 11
mm39_v1_chr10_-_62628008_62628070	2.86382	Pitx2_Otx2	ENSMUST00000217768.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000020268.7|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000218946.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000219527.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1
mm39_v1_chr7_+_45163122_45163135	2.84956	Pitx2_Otx2	ENSMUST00000107762.10|Tulp2|ENSMUSG00000023467.19|tubby-like protein 2
mm39_v1_chr17_+_56259617_56259708	2.8334	Pitx2_Otx2	ENSMUST00000003274.8|Ebi3|ENSMUSG00000003206.8|Epstein-Barr virus induced gene 3
mm39_v1_chr14_-_70666513_70666545	2.83151	Pitx2_Otx2	ENSMUST00000226426.2|Piwil2|ENSMUSG00000033644.6|piwi-like RNA-mediated gene silencing 2	ENSMUST00000048129.6|Piwil2|ENSMUSG00000033644.6|piwi-like RNA-mediated gene silencing 2
mm39_v1_chr6_-_126898768_126898802	2.83074	Pitx2_Otx2	ENSMUST00000078521.7|Dyrk4|ENSMUSG00000030345.17|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
mm39_v1_chrX_+_133088238_133088252	2.82903	Pitx2_Otx2	ENSMUST00000064476.5|Arl13a|ENSMUSG00000052549.5|ADP-ribosylation factor-like 13A
mm39_v1_chr1_+_92900834_92900850	2.81441	Pitx2_Otx2	ENSMUST00000186298.7|Gpr35|ENSMUSG00000026271.16|G protein-coupled receptor 35	ENSMUST00000027489.9|Gpr35|ENSMUSG00000026271.16|G protein-coupled receptor 35
mm39_v1_chr5_-_24760427_24760467	2.8134	Pitx2_Otx2	ENSMUST00000198887.2|Iqca1l|ENSMUSG00000038199.13|IQ motif containing with AAA domain 1 like
mm39_v1_chr10_-_62178453_62178501	2.81037	Pitx2_Otx2	ENSMUST00000143179.2|Hk1|ENSMUSG00000037012.19|hexokinase 1	ENSMUST00000130422.8|Hk1|ENSMUSG00000037012.19|hexokinase 1
mm39_v1_chr15_-_78280099_78280118	2.80309	Pitx2_Otx2	ENSMUST00000229878.2|Tex33|ENSMUSG00000062154.15|testis expressed 33	ENSMUST00000165170.8|Tex33|ENSMUSG00000062154.15|testis expressed 33	ENSMUST00000074380.14|Tex33|ENSMUSG00000062154.15|testis expressed 33
mm39_v1_chrY_+_21242966_21242966	2.79864	Pitx2_Otx2	ENSMUST00000179095.2|Gm20865|ENSMUSG00000093848.3|predicted gene, 20865
mm39_v1_chr7_+_79896121_79896177	2.78538	Pitx2_Otx2	ENSMUST00000058266.9|Ttll13|ENSMUSG00000045467.14|tubulin tyrosine ligase-like family, member 13
mm39_v1_chr4_+_156098292_156098306	2.7841	Pitx2_Otx2	ENSMUST00000030952.6|Tnfrsf4|ENSMUSG00000029075.7|tumor necrosis factor receptor superfamily, member 4
mm39_v1_chr15_-_82128538_82128628	2.77441	Pitx2_Otx2	ENSMUST00000229747.2|Cenpm|ENSMUSG00000068101.12|centromere protein M	ENSMUST00000230408.2|Cenpm|ENSMUSG00000068101.12|centromere protein M
mm39_v1_chr18_+_47054867_47054905	2.77373	Pitx2_Otx2	ENSMUST00000234910.2|Arl14epl|ENSMUSG00000073568.3|ADP-ribosylation factor-like 14 effector protein-like
mm39_v1_chr11_+_117090465_117090518	2.77299	Pitx2_Otx2	ENSMUST00000093907.11|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr6_-_136899167_136899196	2.77094	Pitx2_Otx2	ENSMUST00000032343.7|Erp27|ENSMUSG00000030219.14|endoplasmic reticulum protein 27
mm39_v1_chr11_-_5102218_5102272	2.77064	Pitx2_Otx2	ENSMUST00000163299.8|Emid1|ENSMUSG00000034164.18|EMI domain containing 1	ENSMUST00000062821.13|Emid1|ENSMUSG00000034164.18|EMI domain containing 1
mm39_v1_chr6_-_120334400_120334450	2.75061	Pitx2_Otx2	ENSMUST00000112703.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr7_+_126895463_126895492	2.74887	Pitx2_Otx2	ENSMUST00000106306.9|Itgal|ENSMUSG00000030830.19|integrin alpha L	ENSMUST00000120857.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr11_+_32155415_32155482	2.74296	Pitx2_Otx2	ENSMUST00000039601.10|Snrnp25|ENSMUSG00000040767.11|small nuclear ribonucleoprotein 25 (U11/U12)	ENSMUST00000149043.3|Snrnp25|ENSMUSG00000040767.11|small nuclear ribonucleoprotein 25 (U11/U12)
mm39_v1_chr14_+_53828314_53828365	2.74008	Pitx2_Otx2	ENSMUST00000103654.3|Trav9-2|ENSMUSG00000094966.3|T cell receptor alpha  variable 9-2
mm39_v1_chr7_+_101530524_101530532	2.73824	Pitx2_Otx2	ENSMUST00000106978.8|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr7_+_126895423_126895447	2.73668	Pitx2_Otx2	ENSMUST00000117762.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr4_-_42773987_42773995	2.73544	Pitx2_Otx2	ENSMUST00000095114.5|Ccl21a|ENSMUSG00000094686.2|chemokine (C-C motif) ligand 21A (serine)
mm39_v1_chr10_-_92558219_92558286	2.73245	Pitx2_Otx2	ENSMUST00000020163.7|Nedd1|ENSMUSG00000019988.8|neural precursor cell expressed, developmentally down-regulated gene 1
mm39_v1_chr14_+_54198389_54198407	2.70822	Pitx2_Otx2	ENSMUST00000103678.4|Trdv2-2|ENSMUSG00000076866.4|T cell receptor delta variable 2-2
mm39_v1_chr5_+_122348140_122348197	2.70637	Pitx2_Otx2	ENSMUST00000196187.5|Hvcn1|ENSMUSG00000064267.14|hydrogen voltage-gated channel 1	ENSMUST00000100747.3|Hvcn1|ENSMUSG00000064267.14|hydrogen voltage-gated channel 1
mm39_v1_chr17_-_48349095_48349134	2.70248	Pitx2_Otx2	ENSMUST00000178823.2|1700122O11Rik|ENSMUSG00000094928.2|RIKEN cDNA 1700122O11 gene
mm39_v1_chr1_-_167112784_167112889	2.66974	Pitx2_Otx2	ENSMUST00000053686.9|Uck2|ENSMUSG00000026558.14|uridine-cytidine kinase 2
mm39_v1_chr10_-_93725619_93725688	2.66966	Pitx2_Otx2	ENSMUST00000181091.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000181217.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000047910.15|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2	ENSMUST00000180688.2|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2
mm39_v1_chrX_-_7844265_7844310	2.66693	Pitx2_Otx2	ENSMUST00000125418.2|Gata1|ENSMUSG00000031162.15|GATA binding protein 1
mm39_v1_chr12_+_51395047_51395151	2.66002	Pitx2_Otx2	ENSMUST00000119211.8|G2e3|ENSMUSG00000035293.14|G2/M-phase specific E3 ubiquitin ligase
mm39_v1_chr11_+_70506716_70506736	2.63875	Pitx2_Otx2	ENSMUST00000144960.2|4930544D05Rik|ENSMUSG00000087279.11|RIKEN cDNA 4930544D05 gene
mm39_v1_chr9_-_107512566_107512584	2.63495	Pitx2_Otx2	ENSMUST00000055704.12|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm39_v1_chr16_-_22084700_22084755	2.63442	Pitx2_Otx2	ENSMUST00000161286.8|Tra2b|ENSMUSG00000022858.17|transformer 2 beta
mm39_v1_chr4_-_132523657_132523703	2.63199	Pitx2_Otx2	ENSMUST00000045154.6|Themis2|ENSMUSG00000037731.6|thymocyte selection associated family member 2
mm39_v1_chr3_-_108797022_108797131	2.62933	Pitx2_Otx2	ENSMUST00000180063.8|Fndc7|ENSMUSG00000045326.14|fibronectin type III domain containing 7	ENSMUST00000053065.8|Fndc7|ENSMUSG00000045326.14|fibronectin type III domain containing 7
mm39_v1_chr12_+_79255678_79255698	2.62923	Pitx2_Otx2	ENSMUST00000021548.12|Rdh12|ENSMUSG00000021123.13|retinol dehydrogenase 12
mm39_v1_chr2_+_84489890_84489890	2.6279	Pitx2_Otx2	ENSMUST00000133437.3|Btbd18|ENSMUSG00000086598.10|BTB (POZ) domain containing 18
mm39_v1_chr2_-_118087401_118087467	2.62533	Pitx2_Otx2	ENSMUST00000231133.2|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1	ENSMUST00000028820.7|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1	ENSMUST00000028821.10|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1
mm39_v1_chr12_+_79255702_79255713	2.62447	Pitx2_Otx2	ENSMUST00000122227.8|Rdh12|ENSMUSG00000021123.13|retinol dehydrogenase 12
mm39_v1_chr1_-_131172903_131172995	2.62328	Pitx2_Otx2	ENSMUST00000027688.15|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5	ENSMUST00000112442.2|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5
mm39_v1_chr19_-_11261177_11261249	2.61612	Pitx2_Otx2	ENSMUST00000186937.7|Ms4a5|ENSMUSG00000054523.14|membrane-spanning 4-domains, subfamily A, member 5	ENSMUST00000067673.13|Ms4a5|ENSMUSG00000054523.14|membrane-spanning 4-domains, subfamily A, member 5
mm39_v1_chrX_+_70976038_70976050	2.61356	Pitx2_Otx2	ENSMUST00000101495.3|Gm1141|ENSMUSG00000073130.11|predicted gene 1141
mm39_v1_chr13_+_120306884_120306884	2.61249	Pitx2_Otx2	ENSMUST00000195797.2|D13Ertd608e|ENSMUSG00000095514.3|DNA segment, Chr 13, ERATO Doi 608, expressed
mm39_v1_chr7_-_126574959_126575095	2.60009	Pitx2_Otx2	ENSMUST00000206296.2|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand	ENSMUST00000205437.3|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand
mm39_v1_chr11_+_4186391_4186435	2.59964	Pitx2_Otx2	ENSMUST00000075221.3|Osm|ENSMUSG00000058755.4|oncostatin M
mm39_v1_chr1_-_192883642_192883725	2.59292	Pitx2_Otx2	ENSMUST00000192020.6|Traf3ip3|ENSMUSG00000037318.11|TRAF3 interacting protein 3
mm39_v1_chr19_-_6996791_6996837	2.59287	Pitx2_Otx2	ENSMUST00000040772.9|Fermt3|ENSMUSG00000024965.10|fermitin family member 3
mm39_v1_chrX_-_23825173_23825173	2.588	Pitx2_Otx2	ENSMUST00000118300.2|Tesl2|ENSMUSG00000090102.2|testin LIM domain protein like 2
mm39_v1_chr6_-_124756645_124756698	2.58732	Pitx2_Otx2	ENSMUST00000147669.2|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000128697.8|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000032218.10|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000112475.9|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23
mm39_v1_chr11_+_70506674_70506702	2.58356	Pitx2_Otx2	ENSMUST00000180052.8|4930544D05Rik|ENSMUSG00000087279.11|RIKEN cDNA 4930544D05 gene
mm39_v1_chr17_+_87943401_87943423	2.58237	Pitx2_Otx2	ENSMUST00000235125.2|Epcam|ENSMUSG00000045394.10|epithelial cell adhesion molecule	ENSMUST00000053577.9|Epcam|ENSMUSG00000045394.10|epithelial cell adhesion molecule	ENSMUST00000234009.2|Epcam|ENSMUSG00000045394.10|epithelial cell adhesion molecule
mm39_v1_chr3_+_37117779_37117789	2.57674	Pitx2_Otx2	ENSMUST00000029274.14|Adad1|ENSMUSG00000027719.16|adenosine deaminase domain containing 1 (testis specific)
mm39_v1_chr13_-_74918701_74918714	2.57657	Pitx2_Otx2	ENSMUST00000223126.2|Cast|ENSMUSG00000021585.11|calpastatin
mm39_v1_chr12_+_51394812_51394844	2.56964	Pitx2_Otx2	ENSMUST00000054308.13|G2e3|ENSMUSG00000035293.14|G2/M-phase specific E3 ubiquitin ligase
mm39_v1_chr6_+_86605146_86605190	2.56343	Pitx2_Otx2	ENSMUST00000043400.9|Asprv1|ENSMUSG00000033508.9|aspartic peptidase, retroviral-like 1
mm39_v1_chr19_+_42040681_42040697	2.56019	Pitx2_Otx2	ENSMUST00000164518.4|4933411K16Rik|ENSMUSG00000090369.4|RIKEN cDNA 4933411K16 gene
mm39_v1_chr4_+_114857348_114857367	2.55706	Pitx2_Otx2	ENSMUST00000030490.13|Stil|ENSMUSG00000028718.17|Scl/Tal1 interrupting locus
mm39_v1_chr8_-_120296734_120296774	2.55632	Pitx2_Otx2	ENSMUST00000212517.2|Hsdl1|ENSMUSG00000034189.6|hydroxysteroid dehydrogenase like 1
mm39_v1_chr2_+_157579321_157579371	2.55628	Pitx2_Otx2	ENSMUST00000029178.7|Ctnnbl1|ENSMUSG00000027649.16|catenin, beta like 1
mm39_v1_chr14_-_54655079_54655156	2.55347	Pitx2_Otx2	ENSMUST00000226753.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	ENSMUST00000197440.5|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr8_+_70605404_70605431	2.54921	Pitx2_Otx2	ENSMUST00000110146.9|Mef2b|ENSMUSG00000079033.11|myocyte enhancer factor 2B	ENSMUST00000110143.8|Mef2b|ENSMUSG00000079033.11|myocyte enhancer factor 2B	ENSMUST00000110141.9|Mef2b|ENSMUSG00000079033.11|myocyte enhancer factor 2B	ENSMUST00000110140.2|Mef2b|ENSMUSG00000079033.11|myocyte enhancer factor 2B
mm39_v1_chr17_+_29333116_29333176	2.54903	Pitx2_Otx2	ENSMUST00000233717.2|Rab44|ENSMUSG00000064147.8|RAB44, member RAS oncogene family	ENSMUST00000141239.2|Rab44|ENSMUSG00000064147.8|RAB44, member RAS oncogene family
mm39_v1_chrX_+_102674181_102674204	2.54864	Pitx2_Otx2	ENSMUST00000033692.9|Zcchc13|ENSMUSG00000031330.9|zinc finger, CCHC domain containing 13
mm39_v1_chr5_-_18093739_18093835	2.5475	Pitx2_Otx2	ENSMUST00000169095.6|Cd36|ENSMUSG00000002944.16|CD36 molecule	ENSMUST00000197574.2|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr2_-_129213050_129213066	2.5374	Pitx2_Otx2	ENSMUST00000028881.14|Il1b|ENSMUSG00000027398.14|interleukin 1 beta
mm39_v1_chr11_-_55042529_55042538	2.53296	Pitx2_Otx2	ENSMUST00000020502.9|Slc36a3|ENSMUSG00000049491.16|solute carrier family 36 (proton/amino acid symporter), member 3	ENSMUST00000069816.6|Slc36a3|ENSMUSG00000049491.16|solute carrier family 36 (proton/amino acid symporter), member 3
mm39_v1_chr12_+_51395154_51395190	2.53254	Pitx2_Otx2	ENSMUST00000121521.2|G2e3|ENSMUSG00000035293.14|G2/M-phase specific E3 ubiquitin ligase
mm39_v1_chr2_+_167774247_167774300	2.51872	Pitx2_Otx2	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr2_+_172314433_172314486	2.51727	Pitx2_Otx2	ENSMUST00000029007.3|Fam209|ENSMUSG00000027505.3|family with sequence similarity 209
mm39_v1_chr6_-_131270136_131270211	2.51661	Pitx2_Otx2	ENSMUST00000032307.12|Magohb|ENSMUSG00000030188.13|mago homolog B, exon junction complex core component
mm39_v1_chr1_-_93270430_93270527	2.51241	Pitx2_Otx2	ENSMUST00000027493.4|Pask|ENSMUSG00000026274.12|PAS domain containing serine/threonine kinase
mm39_v1_chr19_+_8861096_8861273	2.5047	Pitx2_Otx2	ENSMUST00000187504.7|Lbhd1|ENSMUSG00000096740.9|LBH domain containing 1
mm39_v1_chr6_+_78402956_78402969	2.50388	Pitx2_Otx2	ENSMUST00000079926.6|Reg1|ENSMUSG00000059654.8|regenerating islet-derived 1
mm39_v1_chr1_+_44022321_44022445	2.49694	Pitx2_Otx2	ENSMUST00000190207.2|Tpp2|ENSMUSG00000041763.15|tripeptidyl peptidase II
mm39_v1_chr14_+_53743184_53743184	2.49292	Pitx2_Otx2	ENSMUST00000103583.5|Trav10|ENSMUSG00000096551.3|T cell receptor alpha variable 10
mm39_v1_chr1_-_128030148_128030223	2.48435	Pitx2_Otx2	ENSMUST00000086614.12|Zranb3|ENSMUSG00000036086.17|zinc finger, RAN-binding domain containing 3
mm39_v1_chr10_-_75946790_75946796	2.48216	Pitx2_Otx2	ENSMUST00000120757.2|Slc5a4b|ENSMUSG00000020226.10|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm39_v1_chr7_-_24245419_24245543	2.47571	Pitx2_Otx2	ENSMUST00000011776.8|Pinlyp|ENSMUSG00000011632.8|phospholipase A2 inhibitor and LY6/PLAUR domain containing
mm39_v1_chr7_-_28079678_28079710	2.47442	Pitx2_Otx2	ENSMUST00000051241.7|Zfp36|ENSMUSG00000044786.7|zinc finger protein 36
mm39_v1_chr5_+_25721059_25721100	2.47135	Pitx2_Otx2	ENSMUST00000045016.9|Cct8l1|ENSMUSG00000038044.9|chaperonin containing TCP1, subunit 8 (theta)-like 1
mm39_v1_chr1_-_95595280_95595323	2.46969	Pitx2_Otx2	ENSMUST00000043336.11|St8sia4|ENSMUSG00000040710.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm39_v1_chr10_+_58333740_58333792	2.46474	Pitx2_Otx2	ENSMUST00000036576.10|Ccdc138|ENSMUSG00000038010.10|coiled-coil domain containing 138
mm39_v1_chr1_+_85949827_85949898	2.45918	Pitx2_Otx2	ENSMUST00000131151.3|Spata3|ENSMUSG00000026226.17|spermatogenesis associated 3
mm39_v1_chr8_-_73188887_73189000	2.4553	Pitx2_Otx2	ENSMUST00000109974.2|Calr3|ENSMUSG00000019732.15|calreticulin 3
mm39_v1_chr7_-_126651847_126651866	2.44264	Pitx2_Otx2	ENSMUST00000205424.2|Zg16|ENSMUSG00000049350.7|zymogen granule protein 16
mm39_v1_chr10_-_63257568_63257568	2.44126	Pitx2_Otx2	ENSMUST00000054760.6|Gm7075|ENSMUSG00000048185.6|predicted gene 7075
mm39_v1_chr8_+_85598734_85598741	2.43756	Pitx2_Otx2	ENSMUST00000170296.2|Syce2|ENSMUSG00000003824.13|synaptonemal complex central element protein 2	ENSMUST00000136026.8|Syce2|ENSMUSG00000003824.13|synaptonemal complex central element protein 2
mm39_v1_chr14_-_51033131_51033186	2.43343	Pitx2_Otx2	ENSMUST00000095932.5|Ccnb1ip1|ENSMUSG00000071470.5|cyclin B1 interacting protein 1
mm39_v1_chr11_-_118021460_118021503	2.43284	Pitx2_Otx2	ENSMUST00000132685.9|Dnah17|ENSMUSG00000033987.17|dynein, axonemal, heavy chain 17
mm39_v1_chr5_-_62923463_62923615	2.41914	Pitx2_Otx2	ENSMUST00000076623.8|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	ENSMUST00000159470.3|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm39_v1_chr1_+_60948149_60948193	2.40193	Pitx2_Otx2	ENSMUST00000027164.9|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr8_+_61343444_61343517	2.40084	Pitx2_Otx2	ENSMUST00000146863.2|Hpf1|ENSMUSG00000038005.16|histone PARylation factor 1	ENSMUST00000037190.15|Hpf1|ENSMUSG00000038005.16|histone PARylation factor 1
mm39_v1_chr3_+_89979948_89979964	2.39595	Pitx2_Otx2	ENSMUST00000121503.8|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma	ENSMUST00000119570.8|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma
mm39_v1_chr12_-_69205882_69205960	2.3902	Pitx2_Otx2	ENSMUST00000037023.9|Rps29|ENSMUSG00000034892.9|ribosomal protein S29
mm39_v1_chr5_+_122344854_122344891	2.38805	Pitx2_Otx2	ENSMUST00000145854.8|Hvcn1|ENSMUSG00000064267.14|hydrogen voltage-gated channel 1
mm39_v1_chr8_-_122634418_122634433	2.38636	Pitx2_Otx2	ENSMUST00000045557.10|Slc7a5|ENSMUSG00000040010.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm39_v1_chr17_-_52138912_52139047	2.38557	Pitx2_Otx2	ENSMUST00000124222.2|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr1_-_16163506_16163565	2.38317	Pitx2_Otx2	ENSMUST00000145070.8|4930444P10Rik|ENSMUSG00000067795.14|RIKEN cDNA 4930444P10 gene	ENSMUST00000151004.2|4930444P10Rik|ENSMUSG00000067795.14|RIKEN cDNA 4930444P10 gene
mm39_v1_chr17_+_34131696_34131724	2.37724	Pitx2_Otx2	ENSMUST00000174146.3|Daxx|ENSMUSG00000002307.17|Fas death domain-associated protein
mm39_v1_chr6_-_23650205_23650271	2.37645	Pitx2_Otx2	ENSMUST00000115354.2|Rnf133|ENSMUSG00000051956.5|ring finger protein 133
mm39_v1_chr13_-_21652632_21652721	2.36425	Pitx2_Otx2	ENSMUST00000068235.6|Nkapl|ENSMUSG00000059395.5|NFKB activating protein-like
mm39_v1_chr4_-_132030643_132030696	2.3623	Pitx2_Otx2	ENSMUST00000040411.7|Rab42|ENSMUSG00000089687.3|RAB42, member RAS oncogene family
mm39_v1_chr17_+_35643853_35643857	2.35636	Pitx2_Otx2	ENSMUST00000113879.4|H2-Q6|ENSMUSG00000073409.13|histocompatibility 2, Q region locus 6
mm39_v1_chr2_-_29983618_29983691	2.35163	Pitx2_Otx2	ENSMUST00000081838.7|Zdhhc12|ENSMUSG00000015335.17|zinc finger, DHHC domain containing 12	ENSMUST00000102865.11|Zdhhc12|ENSMUSG00000015335.17|zinc finger, DHHC domain containing 12
mm39_v1_chr6_-_143045731_143045836	2.33584	Pitx2_Otx2	ENSMUST00000203673.3|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000203187.3|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000171349.8|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000087485.7|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5
mm39_v1_chr9_-_32454157_32454305	2.33524	Pitx2_Otx2	ENSMUST00000183767.2|Fli1|ENSMUSG00000016087.14|Friend leukemia integration 1
mm39_v1_chr4_-_149747644_149747741	2.33397	Pitx2_Otx2	ENSMUST00000105689.8|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
mm39_v1_chr3_-_146227144_146227192	2.32665	Pitx2_Otx2	ENSMUST00000199079.2|Rpf1|ENSMUSG00000028187.11|ribosome production factor 1 homolog	ENSMUST00000029838.11|Rpf1|ENSMUSG00000028187.11|ribosome production factor 1 homolog
mm39_v1_chr1_-_59134042_59134061	2.32007	Pitx2_Otx2	ENSMUST00000238601.2|C2cd6|ENSMUSG00000072295.8|C2 calcium dependent domain containing 6	ENSMUST00000238949.2|C2cd6|ENSMUSG00000072295.8|C2 calcium dependent domain containing 6	ENSMUST00000097080.4|C2cd6|ENSMUSG00000072295.8|C2 calcium dependent domain containing 6
mm39_v1_chr6_+_113369377_113369458	2.31702	Pitx2_Otx2	ENSMUST00000032414.11|Ttll3|ENSMUSG00000030276.20|tubulin tyrosine ligase-like family, member 3	ENSMUST00000038889.12|Ttll3|ENSMUSG00000030276.20|tubulin tyrosine ligase-like family, member 3
mm39_v1_chr11_+_46126274_46126358	2.31058	Pitx2_Otx2	ENSMUST00000060185.3|Fndc9|ENSMUSG00000048721.3|fibronectin type III domain containing 9
mm39_v1_chr9_-_51013361_51013382	2.30711	Pitx2_Otx2	ENSMUST00000170947.3|Hoatz|ENSMUSG00000032057.10|HOATZ cilia and flagella associated protein
mm39_v1_chr13_-_120676749_120676749	2.29581	Pitx2_Otx2	ENSMUST00000177561.2|Gm21762|ENSMUSG00000094027.3|predicted gene, 21762
mm39_v1_chr12_+_104078983_104079039	2.29278	Pitx2_Otx2	ENSMUST00000109965.8|Serpina3a|ENSMUSG00000041536.14|serine (or cysteine) peptidase inhibitor, clade A, member 3A	ENSMUST00000185595.7|Serpina3a|ENSMUSG00000041536.14|serine (or cysteine) peptidase inhibitor, clade A, member 3A
mm39_v1_chr18_-_60635059_60635059	2.29173	Pitx2_Otx2	ENSMUST00000042710.8|Smim3|ENSMUSG00000038059.8|small integral membrane protein 3
mm39_v1_chr6_+_125026865_125026910	2.28843	Pitx2_Otx2	ENSMUST00000112413.8|Acrbp|ENSMUSG00000072770.10|proacrosin binding protein
mm39_v1_chr9_+_110643054_110643085	2.28282	Pitx2_Otx2	ENSMUST00000098345.3|Prss44|ENSMUSG00000032493.9|protease, serine 44
mm39_v1_chr14_-_70414236_70414279	2.27624	Pitx2_Otx2	ENSMUST00000153735.8|Pdlim2|ENSMUSG00000022090.11|PDZ and LIM domain 2
mm39_v1_chr19_+_3438852_3438905	2.26743	Pitx2_Otx2	ENSMUST00000025840.16|Tesmin|ENSMUSG00000024905.16|testis expressed metallothionein like	ENSMUST00000151341.8|Tesmin|ENSMUSG00000024905.16|testis expressed metallothionein like
mm39_v1_chr6_-_72357398_72357472	2.26649	Pitx2_Otx2	ENSMUST00000101285.10|Vamp5|ENSMUSG00000073002.10|vesicle-associated membrane protein 5	ENSMUST00000074231.6|Vamp5|ENSMUSG00000073002.10|vesicle-associated membrane protein 5
mm39_v1_chr11_+_69886652_69886723	2.2644	Pitx2_Otx2	ENSMUST00000101526.9|Phf23|ENSMUSG00000018572.11|PHD finger protein 23
mm39_v1_chr1_+_85538554_85538592	2.25666	Pitx2_Otx2	ENSMUST00000162925.2|Sp140|ENSMUSG00000070031.12|Sp140 nuclear body protein
mm39_v1_chr7_+_45135784_45135823	2.25248	Pitx2_Otx2	ENSMUST00000107758.10|Tulp2|ENSMUSG00000023467.19|tubby-like protein 2
mm39_v1_chr3_+_37117676_37117766	2.25104	Pitx2_Otx2	ENSMUST00000144629.8|Adad1|ENSMUSG00000027719.16|adenosine deaminase domain containing 1 (testis specific)
mm39_v1_chr14_+_53791444_53791479	2.24377	Pitx2_Otx2	ENSMUST00000198297.2|Trav14-1|ENSMUSG00000076840.5|T cell receptor alpha variable 14-1
mm39_v1_chr11_+_87295860_87295940	2.23816	Pitx2_Otx2	ENSMUST00000060835.12|Tex14|ENSMUSG00000010342.17|testis expressed gene 14
mm39_v1_chr12_-_75678092_75678134	2.22976	Pitx2_Otx2	ENSMUST00000238938.2|Rplp2-ps1|ENSMUSG00000118552.2|ribosomal protein, large P2, pseudogene 1
mm39_v1_chr2_-_164932670_164932670	2.22863	Pitx2_Otx2	ENSMUST00000109304.2|1700025C18Rik|ENSMUSG00000078935.2|RIKEN cDNA 1700025C18 gene
mm39_v1_chr9_-_44352312_44352528	2.22684	Pitx2_Otx2	ENSMUST00000215980.2|Foxr1|ENSMUSG00000074397.6|forkhead box R1	ENSMUST00000098837.3|Foxr1|ENSMUSG00000074397.6|forkhead box R1
mm39_v1_chr2_-_151586063_151586125	2.22561	Pitx2_Otx2	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr10_-_62198043_62198098	2.22124	Pitx2_Otx2	ENSMUST00000149534.2|Hk1|ENSMUSG00000037012.19|hexokinase 1
mm39_v1_chr6_-_86710250_86710377	2.22074	Pitx2_Otx2	ENSMUST00000001185.14|Gmcl1|ENSMUSG00000001157.14|germ cell-less, spermatogenesis associated 1
mm39_v1_chr11_+_68484879_68484890	2.21816	Pitx2_Otx2	ENSMUST00000102612.2|Ccdc42|ENSMUSG00000045915.16|coiled-coil domain containing 42
mm39_v1_chr15_+_72962241_72962290	2.21555	Pitx2_Otx2	ENSMUST00000089765.9|Chrac1|ENSMUSG00000068391.9|chromatin accessibility complex 1	ENSMUST00000134353.2|Chrac1|ENSMUSG00000068391.9|chromatin accessibility complex 1
mm39_v1_chr6_-_68994064_68994119	2.20857	Pitx2_Otx2	ENSMUST00000103341.4|Igkv4-80|ENSMUSG00000076540.4|immunoglobulin kappa variable 4-80
mm39_v1_chr11_+_114559350_114559452	2.20129	Pitx2_Otx2	ENSMUST00000106602.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000077915.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000106599.8|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000082092.5|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38
mm39_v1_chr7_-_30523191_30523200	2.1968	Pitx2_Otx2	ENSMUST00000053156.10|Ffar2|ENSMUSG00000051314.12|free fatty acid receptor 2
mm39_v1_chr15_+_102391614_102391638	2.19571	Pitx2_Otx2	ENSMUST00000229432.2|Pcbp2|ENSMUSG00000056851.15|poly(rC) binding protein 2
mm39_v1_chr18_-_37771772_37771791	2.19063	Pitx2_Otx2	ENSMUST00000058635.5|Slc25a2|ENSMUSG00000050304.5|solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2
mm39_v1_chr11_-_26543915_26543943	2.18871	Pitx2_Otx2	ENSMUST00000078362.13|Vrk2|ENSMUSG00000064090.15|vaccinia related kinase 2
mm39_v1_chr18_-_10610332_10610375	2.18809	Pitx2_Otx2	ENSMUST00000025142.13|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1
mm39_v1_chr6_+_42326760_42326803	2.18708	Pitx2_Otx2	ENSMUST00000203652.3|Zyx|ENSMUSG00000029860.17|zyxin	ENSMUST00000070635.13|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr1_-_74323536_74323595	2.18659	Pitx2_Otx2	ENSMUST00000190008.2|Aamp|ENSMUSG00000006299.14|angio-associated migratory protein
mm39_v1_chr7_+_65710086_65710086	2.18589	Pitx2_Otx2	ENSMUST00000153609.8|Snrpa1|ENSMUSG00000030512.14|small nuclear ribonucleoprotein polypeptide A'
mm39_v1_chrY_-_79161056_79161056	2.18439	Pitx2_Otx2	ENSMUST00000179922.2|Gm20917|ENSMUSG00000095867.3|predicted gene, 20917
mm39_v1_chr17_+_57077258_57077305	2.1805	Pitx2_Otx2	ENSMUST00000168666.3|Prr22|ENSMUSG00000090273.4|proline rich 22
mm39_v1_chrY_-_78847812_78847812	2.17501	Pitx2_Otx2	ENSMUST00000180324.2|Gm20806|ENSMUSG00000094739.3|predicted gene, 20806
mm39_v1_chr1_+_171667259_171667270	2.16968	Pitx2_Otx2	ENSMUST00000155802.9|Cd84|ENSMUSG00000038147.15|CD84 antigen
mm39_v1_chr9_-_107512511_107512552	2.15622	Pitx2_Otx2	ENSMUST00000192615.6|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2	ENSMUST00000192837.2|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2	ENSMUST00000193876.2|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm39_v1_chr5_+_114845821_114845927	2.15468	Pitx2_Otx2	ENSMUST00000094441.11|Tchp|ENSMUSG00000002486.16|trichoplein, keratin filament binding
mm39_v1_chr3_-_103716593_103716760	2.15458	Pitx2_Otx2	ENSMUST00000063502.13|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106832.2|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106834.8|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000029435.15|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B
mm39_v1_chr5_+_3394187_3394312	2.15133	Pitx2_Otx2	ENSMUST00000042410.5|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6
mm39_v1_chr5_+_115697526_115697637	2.14706	Pitx2_Otx2	ENSMUST00000086519.12|Rplp0|ENSMUSG00000067274.11|ribosomal protein, large, P0	ENSMUST00000156359.2|Rplp0|ENSMUSG00000067274.11|ribosomal protein, large, P0	ENSMUST00000152976.2|Rplp0|ENSMUSG00000067274.11|ribosomal protein, large, P0
mm39_v1_chr5_+_64387742_64387792	2.1465	Pitx2_Otx2	ENSMUST00000119756.6|Tbc1d1|ENSMUSG00000029174.19|TBC1 domain family, member 1
mm39_v1_chr14_+_53157900_53157900	2.14458	Pitx2_Otx2	ENSMUST00000178252.3|Trav9d-3|ENSMUSG00000095495.3|T cell receptor alpha  variable 9D-3
mm39_v1_chr10_-_71074104_71074118	2.14385	Pitx2_Otx2	ENSMUST00000092430.11|Tfam|ENSMUSG00000003923.15|transcription factor A, mitochondrial	ENSMUST00000105432.10|Tfam|ENSMUSG00000003923.15|transcription factor A, mitochondrial
mm39_v1_chr11_-_69652670_69652726	2.14197	Pitx2_Otx2	ENSMUST00000231829.2|Slc35g3|ENSMUSG00000018776.11|solute carrier family 35, member G3
mm39_v1_chr6_+_113508636_113508682	2.13653	Pitx2_Otx2	ENSMUST00000036340.12|Fancd2|ENSMUSG00000034023.17|Fanconi anemia, complementation group D2	ENSMUST00000204827.3|Fancd2|ENSMUSG00000034023.17|Fanconi anemia, complementation group D2
mm39_v1_chr14_+_53497035_53497035	2.13556	Pitx2_Otx2	ENSMUST00000197614.2|Trav14n-2|ENSMUSG00000093801.3|T cell receptor alpha variable 14N-2
mm39_v1_chr9_-_107863062_107863093	2.12832	Pitx2_Otx2	ENSMUST00000048568.6|Inka1|ENSMUSG00000042106.6|inka box actin regulator 1
mm39_v1_chr1_-_153363354_153363411	2.12504	Pitx2_Otx2	ENSMUST00000186380.7|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000188345.2|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000042141.12|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm39_v1_chr7_-_44888532_44888572	2.10883	Pitx2_Otx2	ENSMUST00000033063.15|Cd37|ENSMUSG00000030798.16|CD37 antigen
mm39_v1_chr3_+_95466982_95466996	2.10436	Pitx2_Otx2	ENSMUST00000090797.11|Hormad1|ENSMUSG00000028109.15|HORMA domain containing 1	ENSMUST00000171191.6|Hormad1|ENSMUSG00000028109.15|HORMA domain containing 1	ENSMUST00000029754.13|Hormad1|ENSMUSG00000028109.15|HORMA domain containing 1	ENSMUST00000107154.4|Hormad1|ENSMUSG00000028109.15|HORMA domain containing 1
mm39_v1_chr10_-_79940168_79940210	2.10166	Pitx2_Otx2	ENSMUST00000219260.2|Sbno2|ENSMUSG00000035673.11|strawberry notch 2
mm39_v1_chr11_-_103511966_103511966	2.09652	Pitx2_Otx2	ENSMUST00000059279.13|Gm884|ENSMUSG00000034239.15|predicted gene 884
mm39_v1_chr10_-_128727542_128727587	2.0916	Pitx2_Otx2	ENSMUST00000026408.7|Gdf11|ENSMUSG00000025352.7|growth differentiation factor 11
mm39_v1_chr5_+_37242714_37242714	2.0912	Pitx2_Otx2	ENSMUST00000121010.9|Jakmip1|ENSMUSG00000063646.19|janus kinase and microtubule interacting protein 1	ENSMUST00000174629.2|Jakmip1|ENSMUSG00000063646.19|janus kinase and microtubule interacting protein 1	ENSMUST00000232332.3|Gm1043|ENSMUSG00000117286.2|predicted gene 1043
mm39_v1_chrX_+_143239577_143239577	2.08942	Pitx2_Otx2	ENSMUST00000155206.8|Trpc5os|ENSMUSG00000072934.11|transient receptor potential cation channel, subfamily C, member 5, opposite strand
mm39_v1_chr15_+_99599978_99600010	2.08597	Pitx2_Otx2	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr9_-_15268958_15269084	2.08478	Pitx2_Otx2	ENSMUST00000161132.9|Cep295|ENSMUSG00000046111.18|centrosomal protein 295	ENSMUST00000098979.11|Cep295|ENSMUSG00000046111.18|centrosomal protein 295
mm39_v1_chr4_-_86530245_86530299	2.07791	Pitx2_Otx2	ENSMUST00000125481.3|Haus6|ENSMUSG00000038047.19|HAUS augmin-like complex, subunit 6	ENSMUST00000070607.9|Haus6|ENSMUSG00000038047.19|HAUS augmin-like complex, subunit 6
mm39_v1_chr1_-_39760150_39760176	2.07435	Pitx2_Otx2	ENSMUST00000151913.3|Rfx8|ENSMUSG00000057173.9|regulatory factor X 8
mm39_v1_chr7_-_84328553_84328609	2.07397	Pitx2_Otx2	ENSMUST00000069537.3|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000207865.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000178385.9|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000208782.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr17_-_53846438_53846487	2.06751	Pitx2_Otx2	ENSMUST00000056198.4|Pp2d1|ENSMUSG00000044957.4|protein phosphatase 2C-like domain containing 1
mm39_v1_chr16_-_32876544_32876582	2.06553	Pitx2_Otx2	ENSMUST00000115100.9|Iqcg|ENSMUSG00000035578.17|IQ motif containing G
mm39_v1_chr5_+_34683141_34683214	2.06425	Pitx2_Otx2	ENSMUST00000125817.8|Sh3bp2|ENSMUSG00000054520.16|SH3-domain binding protein 2	ENSMUST00000067638.14|Sh3bp2|ENSMUSG00000054520.16|SH3-domain binding protein 2
mm39_v1_chrY_-_85540787_85540787	2.06345	Pitx2_Otx2	ENSMUST00000178889.2|Gm20854|ENSMUSG00000095650.3|predicted gene, 20854
mm39_v1_chr14_+_53186025_53186025	2.06302	Pitx2_Otx2	ENSMUST00000196802.2|Trav14d-2|ENSMUSG00000095560.3|T cell receptor alpha variable 14D-2
mm39_v1_chr13_+_24822619_24822719	2.06249	Pitx2_Otx2	ENSMUST00000110384.9|Ripor2|ENSMUSG00000036006.21|RHO family interacting cell polarization regulator 2	ENSMUST00000058009.16|Ripor2|ENSMUSG00000036006.21|RHO family interacting cell polarization regulator 2	ENSMUST00000038477.7|Ripor2|ENSMUSG00000036006.21|RHO family interacting cell polarization regulator 2
mm39_v1_chrX_-_55867668_55867707	2.06108	Pitx2_Otx2	ENSMUST00000135542.2|Map7d3|ENSMUSG00000067878.14|MAP7 domain containing 3	ENSMUST00000114766.8|Map7d3|ENSMUSG00000067878.14|MAP7 domain containing 3
mm39_v1_chr6_-_120334302_120334364	2.05981	Pitx2_Otx2	ENSMUST00000163827.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr1_+_15875846_15875899	2.05358	Pitx2_Otx2	ENSMUST00000188371.7|Terf1|ENSMUSG00000025925.15|telomeric repeat binding factor 1	ENSMUST00000027057.8|Terf1|ENSMUSG00000025925.15|telomeric repeat binding factor 1
mm39_v1_chr12_-_85327080_85327123	2.05332	Pitx2_Otx2	ENSMUST00000117138.3|Acyp1|ENSMUSG00000008822.16|acylphosphatase 1, erythrocyte (common) type
mm39_v1_chr12_-_114140482_114140537	2.05183	Pitx2_Otx2	ENSMUST00000103475.2|Ighv14-4|ENSMUSG00000076666.3|immunoglobulin heavy variable 14-4	ENSMUST00000195706.2|Ighv14-4|ENSMUSG00000076666.3|immunoglobulin heavy variable 14-4
mm39_v1_chr11_+_101333115_101333124	2.05014	Pitx2_Otx2	ENSMUST00000077856.13|Rpl27|ENSMUSG00000063316.14|ribosomal protein L27
mm39_v1_chr15_-_58261093_58261129	2.04772	Pitx2_Otx2	ENSMUST00000227274.3|Anxa13|ENSMUSG00000055114.11|annexin A13
mm39_v1_chr4_-_106474429_106474437	2.04623	Pitx2_Otx2	ENSMUST00000189032.7|Lexm|ENSMUSG00000054362.10|lymphocyte expansion molecule	ENSMUST00000106788.2|Lexm|ENSMUSG00000054362.10|lymphocyte expansion molecule
mm39_v1_chr15_+_100178718_100178753	2.04225	Pitx2_Otx2	ENSMUST00000096200.6|Tmprss12|ENSMUSG00000045631.11|transmembrane (C-terminal) protease, serine 12
mm39_v1_chr4_+_32623985_32624084	2.04192	Pitx2_Otx2	ENSMUST00000108178.2|Casp8ap2|ENSMUSG00000028282.13|caspase 8 associated protein 2
mm39_v1_chr5_-_75205358_75205435	2.03993	Pitx2_Otx2	ENSMUST00000075452.7|Chic2|ENSMUSG00000029229.9|cysteine-rich hydrophobic domain 2
mm39_v1_chr9_+_119921171_119921187	2.03889	Pitx2_Otx2	ENSMUST00000048777.4|Ccr8|ENSMUSG00000042262.6|chemokine (C-C motif) receptor 8
mm39_v1_chr9_+_31297475_31297531	2.0383	Pitx2_Otx2	ENSMUST00000086167.12|Nfrkb|ENSMUSG00000042185.15|nuclear factor related to kappa B binding protein
mm39_v1_chr14_-_63287340_63287409	2.03577	Pitx2_Otx2	ENSMUST00000111209.2|Defb30|ENSMUSG00000075571.9|defensin beta 30	ENSMUST00000111208.2|Defb30|ENSMUSG00000075571.9|defensin beta 30
mm39_v1_chr9_+_45311000_45311016	2.03008	Pitx2_Otx2	ENSMUST00000216289.2|Fxyd2|ENSMUSG00000059412.8|FXYD domain-containing ion transport regulator 2
mm39_v1_chr7_-_45175570_45175692	2.03004	Pitx2_Otx2	ENSMUST00000167273.2|Ppp1r15a|ENSMUSG00000040435.13|protein phosphatase 1, regulatory subunit 15A	ENSMUST00000042105.11|Ppp1r15a|ENSMUSG00000040435.13|protein phosphatase 1, regulatory subunit 15A
mm39_v1_chr7_+_126895531_126895582	2.02847	Pitx2_Otx2	ENSMUST00000170971.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr8_-_85414528_85414539	2.02773	Pitx2_Otx2	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr14_+_53913598_53913598	2.02609	Pitx2_Otx2	ENSMUST00000103662.6|Trav9-4|ENSMUSG00000096678.4|T cell receptor alpha variable 9-4
mm39_v1_chr14_+_47605208_47605253	2.02235	Pitx2_Otx2	ENSMUST00000151405.9|Lgals3|ENSMUSG00000050335.18|lectin, galactose binding, soluble 3
mm39_v1_chr5_-_129856237_129856250	1.99843	Pitx2_Otx2	ENSMUST00000118268.9|Psph|ENSMUSG00000029446.15|phosphoserine phosphatase
mm39_v1_chr2_+_24276545_24276581	1.99731	Pitx2_Otx2	ENSMUST00000127242.2|Psd4|ENSMUSG00000026979.17|pleckstrin and Sec7 domain containing 4
mm39_v1_chrX_-_75646502_75646543	1.99603	Pitx2_Otx2	ENSMUST00000114054.2|Cldn34d|ENSMUSG00000079525.2|claudin 34D
mm39_v1_chr9_-_58648826_58648868	1.99354	Pitx2_Otx2	ENSMUST00000098674.6|Rec114|ENSMUSG00000074269.11|REC114 meiotic recombination protein
mm39_v1_chr3_-_145813802_145813885	1.99209	Pitx2_Otx2	ENSMUST00000160285.2|Dnai3|ENSMUSG00000043020.14|dynein axonemal intermediate chain 3
mm39_v1_chr11_-_117673008_117673049	1.99117	Pitx2_Otx2	ENSMUST00000152304.3|Tmc6|ENSMUSG00000025572.19|transmembrane channel-like gene family 6
mm39_v1_chrX_+_52726793_52726811	1.99051	Pitx2_Otx2	ENSMUST00000069209.2|Ct55|ENSMUSG00000055555.2|cancer/testis antigen 55
mm39_v1_chr8_+_85753452_85753529	1.98485	Pitx2_Otx2	ENSMUST00000047281.10|Trir|ENSMUSG00000041203.10|telomerase RNA component interacting RNase
mm39_v1_chr11_+_106642079_106642107	1.98461	Pitx2_Otx2	ENSMUST00000183111.8|Milr1|ENSMUSG00000040528.16|mast cell immunoglobulin like receptor 1	ENSMUST00000106794.9|Milr1|ENSMUSG00000040528.16|mast cell immunoglobulin like receptor 1
mm39_v1_chr10_+_18283405_18283464	1.98419	Pitx2_Otx2	ENSMUST00000037341.14|Nhsl1|ENSMUSG00000039835.17|NHS-like 1
mm39_v1_chrY_+_21166083_21166083	1.97861	Pitx2_Otx2	ENSMUST00000178234.2|Gm20909|ENSMUSG00000094294.3|predicted gene, 20909
mm39_v1_chrY_-_53413354_53413354	1.97861	Pitx2_Otx2	ENSMUST00000179137.2|Gm20747|ENSMUSG00000094729.3|predicted gene, 20747
mm39_v1_chr7_-_15955918_15955988	1.97497	Pitx2_Otx2	ENSMUST00000118795.8|Dhx34|ENSMUSG00000006019.16|DEAH (Asp-Glu-Ala-His) box polypeptide 34	ENSMUST00000119102.8|Dhx34|ENSMUSG00000006019.16|DEAH (Asp-Glu-Ala-His) box polypeptide 34	ENSMUST00000094816.3|Dhx34|ENSMUSG00000006019.16|DEAH (Asp-Glu-Ala-His) box polypeptide 34	ENSMUST00000163968.8|Dhx34|ENSMUSG00000006019.16|DEAH (Asp-Glu-Ala-His) box polypeptide 34	ENSMUST00000121123.8|Dhx34|ENSMUSG00000006019.16|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm39_v1_chr14_-_59632830_59632830	1.97349	Pitx2_Otx2	ENSMUST00000166912.3|Phf11c|ENSMUSG00000091144.3|PHD finger protein 11C
mm39_v1_chr9_+_64868127_64868219	1.97329	Pitx2_Otx2	ENSMUST00000170517.9|Ints14|ENSMUSG00000034263.14|integrator complex subunit 14	ENSMUST00000037504.7|Ints14|ENSMUSG00000034263.14|integrator complex subunit 14
mm39_v1_chr7_-_117715394_117715432	1.97314	Pitx2_Otx2	ENSMUST00000131374.8|Rps15a|ENSMUSG00000008683.17|ribosomal protein S15A
mm39_v1_chr7_+_16042255_16042318	1.97106	Pitx2_Otx2	ENSMUST00000209688.2|Bbc3|ENSMUSG00000002083.14|BCL2 binding component 3
mm39_v1_chr11_+_69886603_69886642	1.9671	Pitx2_Otx2	ENSMUST00000018716.10|Phf23|ENSMUSG00000018572.11|PHD finger protein 23
mm39_v1_chrY_-_66751879_66751879	1.96097	Pitx2_Otx2	ENSMUST00000178761.2|Gm20852|ENSMUSG00000096666.3|predicted gene, 20852
mm39_v1_chr19_+_3985186_3985286	1.95702	Pitx2_Otx2	ENSMUST00000165711.3|Unc93b1|ENSMUSG00000036908.18|unc-93 homolog B1, TLR signaling regulator	ENSMUST00000162708.7|Unc93b1|ENSMUSG00000036908.18|unc-93 homolog B1, TLR signaling regulator	ENSMUST00000236920.2|Unc93b1|ENSMUSG00000036908.18|unc-93 homolog B1, TLR signaling regulator
mm39_v1_chr6_+_42326714_42326734	1.95594	Pitx2_Otx2	ENSMUST00000203846.3|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr17_+_48400153_48400206	1.93713	Pitx2_Otx2	ENSMUST00000233043.2|1700067P10Rik|ENSMUSG00000021545.6|RIKEN cDNA 1700067P10 gene
mm39_v1_chrY_-_70283393_70283393	1.93663	Pitx2_Otx2	ENSMUST00000180179.2|Gm21118|ENSMUSG00000094052.3|predicted gene, 21118
mm39_v1_chrX_-_135858748_135858777	1.93661	Pitx2_Otx2	ENSMUST00000069803.5|Tmsb15b2|ENSMUSG00000089996.7|thymosin beta 15b2
mm39_v1_chr19_-_17316906_17316932	1.93565	Pitx2_Otx2	ENSMUST00000169897.2|Gcnt1|ENSMUSG00000038843.19|glucosaminyl (N-acetyl) transferase 1, core 2
mm39_v1_chr14_+_54433095_54433095	1.93232	Pitx2_Otx2	ENSMUST00000103717.3|Traj24|ENSMUSG00000076905.3|T cell receptor alpha joining 24
mm39_v1_chr7_-_43906802_43906802	1.93226	Pitx2_Otx2	ENSMUST00000107945.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4	ENSMUST00000118216.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4
mm39_v1_chr15_-_83479312_83479363	1.93143	Pitx2_Otx2	ENSMUST00000016901.5|Ttll12|ENSMUSG00000016757.12|tubulin tyrosine ligase-like family, member 12
mm39_v1_chrX_-_161747552_161747595	1.92531	Pitx2_Otx2	ENSMUST00000038769.3|S100g|ENSMUSG00000040808.5|S100 calcium binding protein G
mm39_v1_chr2_+_92213256_92213270	1.92302	Pitx2_Otx2	ENSMUST00000054316.9|1700029I15Rik|ENSMUSG00000044916.11|RIKEN cDNA 1700029I15 gene	ENSMUST00000111280.3|1700029I15Rik|ENSMUSG00000044916.11|RIKEN cDNA 1700029I15 gene
mm39_v1_chr18_+_34869412_34869412	1.91883	Pitx2_Otx2	ENSMUST00000105038.3|Gm3550|ENSMUSG00000078240.3|predicted gene 3550
mm39_v1_chr11_-_103395423_103395423	1.91747	Pitx2_Otx2	ENSMUST00000153273.3|Lrrc37a|ENSMUSG00000078632.5|leucine rich repeat containing 37A
mm39_v1_chr13_-_24151138_24151163	1.9167	Pitx2_Otx2	ENSMUST00000142826.3|Scgn|ENSMUSG00000021337.9|secretagogin, EF-hand calcium binding protein
mm39_v1_chr11_-_69435382_69435382	1.91151	Pitx2_Otx2	ENSMUST00000035539.12|Dnah2|ENSMUSG00000005237.15|dynein, axonemal, heavy chain 2
mm39_v1_chr6_+_34331054_34331086	1.91023	Pitx2_Otx2	ENSMUST00000038406.7|Akr1b8|ENSMUSG00000029762.7|aldo-keto reductase family 1, member B8
mm39_v1_chrY_+_24411927_24411927	1.90847	Pitx2_Otx2	ENSMUST00000179663.2|Gm20809|ENSMUSG00000093868.3|predicted gene, 20809
mm39_v1_chr4_-_117013396_117013440	1.90038	Pitx2_Otx2	ENSMUST00000102696.5|Rps8|ENSMUSG00000047675.16|ribosomal protein S8
mm39_v1_chr10_+_12881087_12881087	1.89986	Pitx2_Otx2	ENSMUST00000105139.5|Sf3b5|ENSMUSG00000078348.5|splicing factor 3b, subunit 5
mm39_v1_chr7_-_101234800_101234814	1.89593	Pitx2_Otx2	ENSMUST00000209526.2|Art2b|ENSMUSG00000030651.6|ADP-ribosyltransferase 2b
mm39_v1_chr7_-_33867940_33868007	1.89307	Pitx2_Otx2	ENSMUST00000102746.11|Uba2|ENSMUSG00000052997.16|ubiquitin-like modifier activating enzyme 2
mm39_v1_chr15_+_81912312_81912334	1.89186	Pitx2_Otx2	ENSMUST00000230729.2|Xrcc6|ENSMUSG00000022471.15|X-ray repair complementing defective repair in Chinese hamster cells 6
mm39_v1_chr8_+_71069476_71069577	1.88854	Pitx2_Otx2	ENSMUST00000052437.6|Lrrc25|ENSMUSG00000049988.6|leucine rich repeat containing 25
mm39_v1_chrY_-_84574663_84574663	1.88733	Pitx2_Otx2	ENSMUST00000179523.2|Gm21394|ENSMUSG00000094660.3|predicted gene, 21394
mm39_v1_chr12_+_111005768_111005834	1.8846	Pitx2_Otx2	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr9_+_108270020_108270042	1.88292	Pitx2_Otx2	ENSMUST00000035234.6|1700102P08Rik|ENSMUSG00000032611.10|RIKEN cDNA 1700102P08 gene
mm39_v1_chr8_-_56359983_56360012	1.8829	Pitx2_Otx2	ENSMUST00000053441.5|Adam29|ENSMUSG00000046258.5|a disintegrin and metallopeptidase domain 29
mm39_v1_chr4_+_135639117_135639159	1.88034	Pitx2_Otx2	ENSMUST00000068830.4|Cnr2|ENSMUSG00000062585.12|cannabinoid receptor 2 (macrophage)
mm39_v1_chr5_-_129856267_129856347	1.87738	Pitx2_Otx2	ENSMUST00000201394.4|Psph|ENSMUSG00000029446.15|phosphoserine phosphatase
mm39_v1_chr11_+_75890738_75890773	1.87721	Pitx2_Otx2	ENSMUST00000066408.6|1700016K19Rik|ENSMUSG00000053783.6|RIKEN cDNA 1700016K19 gene
mm39_v1_chr11_-_82719850_82719869	1.87512	Pitx2_Otx2	ENSMUST00000021036.13|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000074515.11|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000103218.3|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr5_+_37208198_37208209	1.87442	Pitx2_Otx2	ENSMUST00000043794.11|Jakmip1|ENSMUSG00000063646.19|janus kinase and microtubule interacting protein 1
mm39_v1_chr11_-_116472272_116472298	1.8667	Pitx2_Otx2	ENSMUST00000082152.5|Ube2o|ENSMUSG00000020802.9|ubiquitin-conjugating enzyme E2O
mm39_v1_chr5_-_92457753_92457859	1.86528	Pitx2_Otx2	ENSMUST00000201143.2|Sdad1|ENSMUSG00000029415.5|SDA1 domain containing 1
mm39_v1_chr18_-_3309858_3309915	1.86155	Pitx2_Otx2	ENSMUST00000144496.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator	ENSMUST00000154715.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr10_-_30076543_30076569	1.85821	Pitx2_Otx2	ENSMUST00000099985.6|Cenpw|ENSMUSG00000075266.6|centromere protein W
mm39_v1_chr12_-_79027531_79027598	1.85682	Pitx2_Otx2	ENSMUST00000174072.8|Tmem229b|ENSMUSG00000046157.14|transmembrane protein 229B
mm39_v1_chr2_-_30691709_30691755	1.85674	Pitx2_Otx2	ENSMUST00000050003.9|1700001O22Rik|ENSMUSG00000044320.15|RIKEN cDNA 1700001O22 gene
mm39_v1_chr17_-_32639936_32639960	1.85305	Pitx2_Otx2	ENSMUST00000170392.9|Pglyrp2|ENSMUSG00000079563.11|peptidoglycan recognition protein 2	ENSMUST00000237165.2|Pglyrp2|ENSMUSG00000079563.11|peptidoglycan recognition protein 2	ENSMUST00000235892.2|Pglyrp2|ENSMUSG00000079563.11|peptidoglycan recognition protein 2	ENSMUST00000114455.3|Pglyrp2|ENSMUSG00000079563.11|peptidoglycan recognition protein 2
mm39_v1_chr5_-_134935579_134935594	1.84677	Pitx2_Otx2	ENSMUST00000201316.4|Tmem270|ENSMUSG00000040576.9|transmembrane protein 270	ENSMUST00000047305.6|Tmem270|ENSMUSG00000040576.9|transmembrane protein 270
mm39_v1_chrY_+_818646_818713	1.84451	Pitx2_Otx2	ENSMUST00000190013.7|Uba1y|ENSMUSG00000069053.12|ubiquitin-activating enzyme, Chr Y	ENSMUST00000115894.3|Uba1y|ENSMUSG00000069053.12|ubiquitin-activating enzyme, Chr Y
mm39_v1_chr7_-_24033346_24033380	1.83633	Pitx2_Otx2	ENSMUST00000069562.6|Tescl|ENSMUSG00000055826.6|tescalcin-like
mm39_v1_chrY_-_67057835_67057835	1.83595	Pitx2_Otx2	ENSMUST00000179136.2|Ssty2|ENSMUSG00000095302.3|spermiogenesis specific transcript on the Y 2
mm39_v1_chr1_-_26726539_26726543	1.82992	Pitx2_Otx2	ENSMUST00000097801.4|4931408C20Rik|ENSMUSG00000073722.4|RIKEN cDNA 4931408C20 gene
mm39_v1_chr8_-_84467798_84467955	1.82284	Pitx2_Otx2	ENSMUST00000075843.13|Adgre5|ENSMUSG00000002885.15|adhesion G protein-coupled receptor E5	ENSMUST00000109802.3|Adgre5|ENSMUSG00000002885.15|adhesion G protein-coupled receptor E5	ENSMUST00000166939.8|Adgre5|ENSMUSG00000002885.15|adhesion G protein-coupled receptor E5	ENSMUST00000002964.14|Adgre5|ENSMUSG00000002885.15|adhesion G protein-coupled receptor E5
mm39_v1_chrX_+_61330748_61330767	1.82005	Pitx2_Otx2	ENSMUST00000051414.2|Magec2|ENSMUSG00000045330.9|MAGE family member C2
mm39_v1_chr9_-_103182246_103182295	1.81985	Pitx2_Otx2	ENSMUST00000142540.2|1300017J02Rik|ENSMUSG00000033688.11|RIKEN cDNA 1300017J02 gene
mm39_v1_chr10_+_51356728_51356754	1.81492	Pitx2_Otx2	ENSMUST00000102894.6|Lilr4b|ENSMUSG00000112023.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4B	ENSMUST00000219696.2|Gm49339|ENSMUSG00000062593.18|predicted gene, 49339	ENSMUST00000217706.2|Gm49339|ENSMUSG00000062593.18|predicted gene, 49339	ENSMUST00000219661.2|Lilr4b|ENSMUSG00000112023.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4B
mm39_v1_chr7_-_47178610_47178610	1.81162	Pitx2_Otx2	ENSMUST00000172559.2|Mrgpra2b|ENSMUSG00000096719.2|MAS-related GPR, member A2B
mm39_v1_chr1_-_153425791_153425827	1.80929	Pitx2_Otx2	ENSMUST00000041874.9|Npl|ENSMUSG00000042684.9|N-acetylneuraminate pyruvate lyase
mm39_v1_chr5_-_92457862_92457883	1.80811	Pitx2_Otx2	ENSMUST00000031364.5|Sdad1|ENSMUSG00000029415.5|SDA1 domain containing 1
mm39_v1_chr5_+_114924106_114924106	1.79493	Pitx2_Otx2	ENSMUST00000137519.2|Ankrd13a|ENSMUSG00000041870.18|ankyrin repeat domain 13a
mm39_v1_chr3_+_108847375_108847441	1.79274	Pitx2_Otx2	ENSMUST00000197427.5|Henmt1|ENSMUSG00000045662.18|HEN1 methyltransferase homolog 1 (Arabidopsis)	ENSMUST00000059946.11|Henmt1|ENSMUSG00000045662.18|HEN1 methyltransferase homolog 1 (Arabidopsis)	ENSMUST00000098680.9|Henmt1|ENSMUSG00000045662.18|HEN1 methyltransferase homolog 1 (Arabidopsis)
mm39_v1_chr6_+_129374260_129374296	1.79273	Pitx2_Otx2	ENSMUST00000032262.14|Clec1b|ENSMUSG00000030159.16|C-type lectin domain family 1, member b
mm39_v1_chr4_+_152410291_152410333	1.79146	Pitx2_Otx2	ENSMUST00000103191.11|Rpl22|ENSMUSG00000028936.16|ribosomal protein L22	ENSMUST00000139685.8|Rpl22|ENSMUSG00000028936.16|ribosomal protein L22	ENSMUST00000188151.2|Rpl22|ENSMUSG00000028936.16|ribosomal protein L22
mm39_v1_chr8_+_118225008_118225031	1.79039	Pitx2_Otx2	ENSMUST00000081232.9|Plcg2|ENSMUSG00000034330.11|phospholipase C, gamma 2
mm39_v1_chrX_-_78679179_78679193	1.78954	Pitx2_Otx2	ENSMUST00000114016.10|Mageb16|ENSMUSG00000046942.18|MAGE family member B16
mm39_v1_chr11_+_100969237_100969261	1.7768	Pitx2_Otx2	ENSMUST00000019445.6|Hsd17b1|ENSMUSG00000019301.6|hydroxysteroid (17-beta) dehydrogenase 1
mm39_v1_chr5_-_148931957_148931984	1.77554	Pitx2_Otx2	ENSMUST00000147473.6|Gm42791|ENSMUSG00000106892.2|predicted gene 42791
mm39_v1_chr11_-_109718845_109718856	1.76834	Pitx2_Otx2	ENSMUST00000020941.11|1700012B07Rik|ENSMUSG00000020617.14|RIKEN cDNA 1700012B07 gene
mm39_v1_chr9_-_61883845_61883858	1.76775	Pitx2_Otx2	ENSMUST00000113990.2|Paqr5|ENSMUSG00000032278.12|progestin and adipoQ receptor family member V
mm39_v1_chr19_+_10183397_10183397	1.76745	Pitx2_Otx2	ENSMUST00000166412.2|Tmem258|ENSMUSG00000036372.15|transmembrane protein 258
mm39_v1_chr11_-_26543970_26544007	1.76441	Pitx2_Otx2	ENSMUST00000156264.2|Vrk2|ENSMUSG00000064090.15|vaccinia related kinase 2
mm39_v1_chr19_-_57185988_57186063	1.76429	Pitx2_Otx2	ENSMUST00000099294.9|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr7_-_80475722_80475770	1.76422	Pitx2_Otx2	ENSMUST00000205304.2|Iqgap1|ENSMUSG00000030536.11|IQ motif containing GTPase activating protein 1
mm39_v1_chr13_+_120724601_120724727	1.76338	Pitx2_Otx2	ENSMUST00000181748.2|AF067061|ENSMUSG00000095071.3|cDNA sequence AF067061	ENSMUST00000179905.2|AF067061|ENSMUSG00000095071.3|cDNA sequence AF067061
mm39_v1_chr2_+_25108752_25108762	1.75954	Pitx2_Otx2	ENSMUST00000028346.4|Fam166a|ENSMUSG00000026969.4|family with sequence similarity 166, member A
mm39_v1_chr8_+_117822593_117822737	1.74609	Pitx2_Otx2	ENSMUST00000034308.16|Bco1|ENSMUSG00000031845.17|beta-carotene oxygenase 1	ENSMUST00000176860.2|Bco1|ENSMUSG00000031845.17|beta-carotene oxygenase 1
mm39_v1_chr6_+_129385816_129385839	1.74317	Pitx2_Otx2	ENSMUST00000058352.15|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a	ENSMUST00000088075.8|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a
mm39_v1_chr19_+_40737197_40737270	1.74069	Pitx2_Otx2	ENSMUST00000224596.2|Cc2d2b|ENSMUSG00000108929.3|coiled-coil and C2 domain containing 2B	ENSMUST00000207801.2|Cc2d2b|ENSMUSG00000108929.3|coiled-coil and C2 domain containing 2B
mm39_v1_chr15_+_77392466_77392471	1.73698	Pitx2_Otx2	ENSMUST00000172191.3|Apol11a|ENSMUSG00000091650.3|apolipoprotein L 11a
mm39_v1_chr9_+_15217548_15217625	1.73671	Pitx2_Otx2	ENSMUST00000215124.2|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D	ENSMUST00000164079.9|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D	ENSMUST00000216109.2|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D
mm39_v1_chr5_-_139722046_139722091	1.73621	Pitx2_Otx2	ENSMUST00000044642.14|Micall2|ENSMUSG00000036718.18|MICAL-like 2
mm39_v1_chr7_+_28834350_28834390	1.73259	Pitx2_Otx2	ENSMUST00000159975.8|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000094617.11|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000032811.12|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4
mm39_v1_chr15_+_44320918_44320949	1.73248	Pitx2_Otx2	ENSMUST00000038336.12|Pkhd1l1|ENSMUSG00000038725.14|polycystic kidney and hepatic disease 1-like 1	ENSMUST00000166957.2|Pkhd1l1|ENSMUSG00000038725.14|polycystic kidney and hepatic disease 1-like 1	ENSMUST00000209244.2|Pkhd1l1|ENSMUSG00000038725.14|polycystic kidney and hepatic disease 1-like 1
mm39_v1_chr16_+_32002750_32002752	1.72523	Pitx2_Otx2	ENSMUST00000231512.2|Bex6|ENSMUSG00000075269.6|brain expressed family member 6
mm39_v1_chr19_-_8763771_8763788	1.72261	Pitx2_Otx2	ENSMUST00000176496.8|Taf6l|ENSMUSG00000003680.17|TATA-box binding protein associated factor 6 like
mm39_v1_chr10_+_79832313_79832339	1.72074	Pitx2_Otx2	ENSMUST00000132517.8|Abca7|ENSMUSG00000035722.16|ATP-binding cassette, sub-family A (ABC1), member 7
mm39_v1_chr9_-_69945358_69945370	1.71783	Pitx2_Otx2	ENSMUST00000034751.6|Gcnt3|ENSMUSG00000032226.6|glucosaminyl (N-acetyl) transferase 3, mucin type
mm39_v1_chr3_-_15902583_15902692	1.71694	Pitx2_Otx2	ENSMUST00000108354.8|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108349.2|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108352.9|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108350.8|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000050623.11|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C
mm39_v1_chr7_+_43874854_43874875	1.71636	Pitx2_Otx2	ENSMUST00000206144.2|Klk1|ENSMUSG00000063903.6|kallikrein 1
mm39_v1_chr15_+_66670593_66670600	1.71626	Pitx2_Otx2	ENSMUST00000166403.2|Tg|ENSMUSG00000053469.15|thyroglobulin
mm39_v1_chr9_-_7836962_7837106	1.70991	Pitx2_Otx2	ENSMUST00000190341.7|Birc2|ENSMUSG00000057367.13|baculoviral IAP repeat-containing 2	ENSMUST00000054878.6|Birc2|ENSMUSG00000057367.13|baculoviral IAP repeat-containing 2
mm39_v1_chr7_-_44888465_44888489	1.70771	Pitx2_Otx2	ENSMUST00000210078.2|Cd37|ENSMUSG00000030798.16|CD37 antigen
mm39_v1_chr15_-_89309998_89310054	1.70275	Pitx2_Otx2	ENSMUST00000168376.2|Cpt1b|ENSMUSG00000078937.9|carnitine palmitoyltransferase 1b, muscle
mm39_v1_chr17_-_80022480_80022532	1.6943	Pitx2_Otx2	ENSMUST00000234361.2|Cyp1b1|ENSMUSG00000024087.5|cytochrome P450, family 1, subfamily b, polypeptide 1
mm39_v1_chr8_+_3520841_3520862	1.69102	Pitx2_Otx2	ENSMUST00000047265.13|Tex45|ENSMUSG00000040340.14|testis expressed 45
mm39_v1_chr7_-_101516597_101516627	1.68773	Pitx2_Otx2	ENSMUST00000106982.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr17_-_80022463_80022476	1.68509	Pitx2_Otx2	ENSMUST00000024894.2|Cyp1b1|ENSMUSG00000024087.5|cytochrome P450, family 1, subfamily b, polypeptide 1
mm39_v1_chr10_-_116385007_116385068	1.67846	Pitx2_Otx2	ENSMUST00000164088.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr1_+_86354045_86354069	1.67598	Pitx2_Otx2	ENSMUST00000046004.6|Tex44|ENSMUSG00000036574.6|testis expressed 44
mm39_v1_chr5_+_33787249_33787276	1.67554	Pitx2_Otx2	ENSMUST00000181102.2|Gm9903|ENSMUSG00000097271.2|predicted gene 9903
mm39_v1_chr16_+_17051423_17051528	1.67502	Pitx2_Otx2	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr5_+_138115165_138115303	1.67446	Pitx2_Otx2	ENSMUST00000062350.15|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110961.9|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000080732.10|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110960.9|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000142185.8|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000136425.2|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110959.2|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21
mm39_v1_chrY_-_77972959_77972959	1.67276	Pitx2_Otx2	ENSMUST00000178900.2|Gm20867|ENSMUSG00000096898.3|predicted gene, 20867
mm39_v1_chr15_+_8138757_8138791	1.67174	Pitx2_Otx2	ENSMUST00000163765.3|Nup155|ENSMUSG00000022142.9|nucleoporin 155
mm39_v1_chr5_-_121660134_121660134	1.67057	Pitx2_Otx2	ENSMUST00000100757.6|Adam1a|ENSMUSG00000072647.7|a disintegrin and metallopeptidase domain 1a
mm39_v1_chr16_-_38162174_38162220	1.67037	Pitx2_Otx2	ENSMUST00000114740.3|Cfap91|ENSMUSG00000022805.18|cilia and flagella associated protein 91
mm39_v1_chr6_+_35154545_35154564	1.66711	Pitx2_Otx2	ENSMUST00000170234.2|Nup205|ENSMUSG00000038759.16|nucleoporin 205
mm39_v1_chr11_-_68864666_68864690	1.65898	Pitx2_Otx2	ENSMUST00000038644.5|Rangrf|ENSMUSG00000032892.15|RAN guanine nucleotide release factor
mm39_v1_chr2_-_25086810_25086898	1.65494	Pitx2_Otx2	ENSMUST00000081869.7|Tor4a|ENSMUSG00000059555.7|torsin family 4, member A
mm39_v1_chr14_+_43951187_43951191	1.65118	Pitx2_Otx2	ENSMUST00000094051.6|Gm7324|ENSMUSG00000049235.9|predicted gene 7324
mm39_v1_chr11_-_99482165_99482207	1.64903	Pitx2_Otx2	ENSMUST00000104930.2|Krtap1-3|ENSMUSG00000078131.2|keratin associated protein 1-3
mm39_v1_chr17_-_89099404_89099425	1.64583	Pitx2_Otx2	ENSMUST00000024916.7|Lhcgr|ENSMUSG00000024107.8|luteinizing hormone/choriogonadotropin receptor
mm39_v1_chr14_+_53878158_53878158	1.64547	Pitx2_Otx2	ENSMUST00000179267.4|Trav14-2|ENSMUSG00000095711.6|T cell receptor alpha variable 14-2
mm39_v1_chr2_-_163486998_163487064	1.64542	Pitx2_Otx2	ENSMUST00000017851.4|Serinc3|ENSMUSG00000017707.10|serine incorporator 3
mm39_v1_chr14_+_73411249_73411324	1.64489	Pitx2_Otx2	ENSMUST00000166875.2|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chr17_+_21643489_21643526	1.63503	Pitx2_Otx2	ENSMUST00000165230.8|Zfp54|ENSMUSG00000023882.16|zinc finger protein 54	ENSMUST00000007884.15|Zfp54|ENSMUSG00000023882.16|zinc finger protein 54	ENSMUST00000167749.2|Zfp54|ENSMUSG00000023882.16|zinc finger protein 54
mm39_v1_chr14_+_26722319_26722463	1.63222	Pitx2_Otx2	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chr11_-_115024807_115024823	1.62961	Pitx2_Otx2	ENSMUST00000106561.8|Cd300lf|ENSMUSG00000047798.16|CD300 molecule like family member F	ENSMUST00000051264.14|Cd300lf|ENSMUSG00000047798.16|CD300 molecule like family member F	ENSMUST00000106562.3|Cd300lf|ENSMUSG00000047798.16|CD300 molecule like family member F
mm39_v1_chr6_-_49240944_49240992	1.62552	Pitx2_Otx2	ENSMUST00000204189.3|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha	ENSMUST00000031841.9|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha
mm39_v1_chr19_+_36061096_36061136	1.62547	Pitx2_Otx2	ENSMUST00000025714.9|Rpp30|ENSMUSG00000024800.9|ribonuclease P/MRP 30 subunit
mm39_v1_chr7_+_43874752_43874784	1.62471	Pitx2_Otx2	ENSMUST00000075162.5|Klk1|ENSMUSG00000063903.6|kallikrein 1
mm39_v1_chr17_-_72059865_72059889	1.61961	Pitx2_Otx2	ENSMUST00000057405.9|Pcare|ENSMUSG00000044375.9|photoreceptor cilium actin regulator
mm39_v1_chr11_+_51858476_51858538	1.61901	Pitx2_Otx2	ENSMUST00000102763.5|Cdkn2aipnl|ENSMUSG00000020392.9|CDKN2A interacting protein N-terminal like
mm39_v1_chr4_+_114857370_114857406	1.6186	Pitx2_Otx2	ENSMUST00000129957.8|Stil|ENSMUSG00000028718.17|Scl/Tal1 interrupting locus
mm39_v1_chrY_+_68550741_68550741	1.61692	Pitx2_Otx2	ENSMUST00000177765.2|Gm20816|ENSMUSG00000095634.3|predicted gene, 20816
mm39_v1_chr1_-_132958299_132958324	1.61689	Pitx2_Otx2	ENSMUST00000190807.2|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr3_+_106389732_106389809	1.61544	Pitx2_Otx2	ENSMUST00000029508.11|Dennd2d|ENSMUSG00000027901.13|DENN/MADD domain containing 2D
mm39_v1_chr17_+_35658131_35658171	1.61363	Pitx2_Otx2	ENSMUST00000071951.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000116598.10|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000078205.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000076256.8|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7
mm39_v1_chrY_-_65214536_65214536	1.61359	Pitx2_Otx2	ENSMUST00000177663.2|Gm20924|ENSMUSG00000095785.3|predicted gene, 20924
mm39_v1_chr7_+_118196518_118196565	1.61232	Pitx2_Otx2	ENSMUST00000098088.11|Tmc5|ENSMUSG00000030650.19|transmembrane channel-like gene family 5	ENSMUST00000121715.8|Tmc5|ENSMUSG00000030650.19|transmembrane channel-like gene family 5
mm39_v1_chr13_-_74918745_74918855	1.61176	Pitx2_Otx2	ENSMUST00000223033.2|Cast|ENSMUSG00000021585.11|calpastatin	ENSMUST00000222588.2|Cast|ENSMUSG00000021585.11|calpastatin
mm39_v1_chr7_-_19684654_19684681	1.60961	Pitx2_Otx2	ENSMUST00000043440.8|Igsf23|ENSMUSG00000040498.8|immunoglobulin superfamily, member 23
mm39_v1_chr10_+_58230203_58230217	1.60909	Pitx2_Otx2	ENSMUST00000105468.2|Lims1|ENSMUSG00000019920.19|LIM and senescent cell antigen-like domains 1
mm39_v1_chr2_-_25517945_25518042	1.6083	Pitx2_Otx2	ENSMUST00000028307.9|Fcna|ENSMUSG00000026938.11|ficolin A
mm39_v1_chr9_+_15217503_15217537	1.60758	Pitx2_Otx2	ENSMUST00000034415.6|Taf1d|ENSMUSG00000031939.17|TATA-box binding protein associated factor, RNA polymerase I, D
mm39_v1_chr5_+_108048367_108048378	1.60717	Pitx2_Otx2	ENSMUST00000082223.13|Rpl5|ENSMUSG00000058558.13|ribosomal protein L5
mm39_v1_chr10_+_58230183_58230202	1.60583	Pitx2_Otx2	ENSMUST00000020077.11|Lims1|ENSMUSG00000019920.19|LIM and senescent cell antigen-like domains 1
mm39_v1_chr8_-_43759973_43760004	1.60317	Pitx2_Otx2	ENSMUST00000211248.2|Zfp42|ENSMUSG00000051176.7|zinc finger protein 42	ENSMUST00000209356.2|Zfp42|ENSMUSG00000051176.7|zinc finger protein 42
mm39_v1_chr9_+_62754252_62754315	1.59513	Pitx2_Otx2	ENSMUST00000124984.2|Cln6|ENSMUSG00000032245.13|ceroid-lipofuscinosis, neuronal 6
mm39_v1_chr2_-_35257741_35257749	1.59403	Pitx2_Otx2	ENSMUST00000028243.2|4930568D16Rik|ENSMUSG00000026882.2|RIKEN cDNA 4930568D16 gene
mm39_v1_chr10_+_118094593_118094593	1.58618	Pitx2_Otx2	ENSMUST00000219565.2|Gm32802|ENSMUSG00000112252.2|predicted gene, 32802
mm39_v1_chr3_+_84081411_84081411	1.5844	Pitx2_Otx2	ENSMUST00000193882.2|Gm6525|ENSMUSG00000104043.2|predicted pseudogene 6525
mm39_v1_chr6_+_119213468_119213493	1.58377	Pitx2_Otx2	ENSMUST00000238905.2|Cacna2d4|ENSMUSG00000041460.17|calcium channel, voltage-dependent, alpha 2/delta subunit 4	ENSMUST00000037434.13|Cacna2d4|ENSMUSG00000041460.17|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm39_v1_chr8_+_73197718_73197797	1.57372	Pitx2_Otx2	ENSMUST00000064853.13|1700030K09Rik|ENSMUSG00000052794.14|RIKEN cDNA 1700030K09 gene	ENSMUST00000121902.2|1700030K09Rik|ENSMUSG00000052794.14|RIKEN cDNA 1700030K09 gene
mm39_v1_chr6_-_67919524_67919549	1.56205	Pitx2_Otx2	ENSMUST00000196768.2|Igkv9-124|ENSMUSG00000096632.3|immunoglobulin kappa chain variable 9-124
mm39_v1_chr7_+_24602337_24602510	1.56186	Pitx2_Otx2	ENSMUST00000117796.8|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000047873.16|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000098683.11|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206508.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206028.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr1_+_171158979_171158994	1.56118	Pitx2_Otx2	ENSMUST00000097467.8|Dedd|ENSMUSG00000013973.13|death effector domain-containing
mm39_v1_chr12_+_87783347_87783347	1.55862	Pitx2_Otx2	ENSMUST00000110149.2|Eif1ad2|ENSMUSG00000079031.2|eukaryotic translation initiation factor 1A domain containing 2
mm39_v1_chrX_-_35755483_35755483	1.55749	Pitx2_Otx2	ENSMUST00000169499.2|Gm14569|ENSMUSG00000091556.9|predicted gene 14569
mm39_v1_chr9_+_53314549_53314637	1.55467	Pitx2_Otx2	ENSMUST00000215668.2|4930550C14Rik|ENSMUSG00000005131.5|RIKEN cDNA 4930550C14 gene
mm39_v1_chr7_-_16121682_16121711	1.55451	Pitx2_Otx2	ENSMUST00000094815.5|Sae1|ENSMUSG00000052833.10|SUMO1 activating enzyme subunit 1
mm39_v1_chr10_-_22025169_22025169	1.55319	Pitx2_Otx2	ENSMUST00000179054.8|E030030I06Rik|ENSMUSG00000097327.8|RIKEN cDNA E030030I06 gene	ENSMUST00000069372.7|E030030I06Rik|ENSMUSG00000097327.8|RIKEN cDNA E030030I06 gene
mm39_v1_chr14_+_54448904_54448927	1.5518	Pitx2_Otx2	ENSMUST00000103733.2|Traj7|ENSMUSG00000076921.2|T cell receptor alpha joining 7
mm39_v1_chr9_+_122576325_122576411	1.54827	Pitx2_Otx2	ENSMUST00000178679.3|Topaz1|ENSMUSG00000094985.3|testis and ovary specific PAZ domain containing 1
mm39_v1_chr12_-_85335193_85335212	1.54606	Pitx2_Otx2	ENSMUST00000121930.2|Acyp1|ENSMUSG00000008822.16|acylphosphatase 1, erythrocyte (common) type
mm39_v1_chr2_-_34645241_34645268	1.54165	Pitx2_Otx2	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chrX_-_8414494_8414494	1.53849	Pitx2_Otx2	ENSMUST00000138642.3|Ssxb6|ENSMUSG00000079702.6|synovial sarcoma, X member B6
mm39_v1_chr1_-_194859015_194859034	1.53738	Pitx2_Otx2	ENSMUST00000082321.9|Cr2|ENSMUSG00000026616.17|complement receptor 2	ENSMUST00000195120.6|Cr2|ENSMUSG00000026616.17|complement receptor 2
mm39_v1_chr7_+_140711181_140711247	1.53653	Pitx2_Otx2	ENSMUST00000026568.10|Ptdss2|ENSMUSG00000025495.16|phosphatidylserine synthase 2
mm39_v1_chr4_-_133914329_133914423	1.53558	Pitx2_Otx2	ENSMUST00000040271.12|Cep85|ENSMUSG00000037443.14|centrosomal protein 85
mm39_v1_chr8_+_106434901_106434935	1.5341	Pitx2_Otx2	ENSMUST00000013302.7|4933405L10Rik|ENSMUSG00000013158.7|RIKEN cDNA 4933405L10 gene	ENSMUST00000211852.2|4933405L10Rik|ENSMUSG00000013158.7|RIKEN cDNA 4933405L10 gene
mm39_v1_chr4_-_139079842_139079899	1.53087	Pitx2_Otx2	ENSMUST00000102503.10|Mrto4|ENSMUSG00000028741.14|mRNA turnover 4, ribosome maturation factor
mm39_v1_chr1_-_85239791_85239791	1.53021	Pitx2_Otx2	ENSMUST00000162421.2|C130026I21Rik|ENSMUSG00000052477.16|RIKEN cDNA C130026I21 gene
mm39_v1_chr5_+_120950690_120950715	1.52564	Pitx2_Otx2	ENSMUST00000086377.9|Oas1b|ENSMUSG00000029605.17|2'-5' oligoadenylate synthetase 1B
mm39_v1_chr6_+_42326528_42326564	1.52406	Pitx2_Otx2	ENSMUST00000203329.3|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr6_+_42326934_42326978	1.51598	Pitx2_Otx2	ENSMUST00000203401.3|Zyx|ENSMUSG00000029860.17|zyxin	ENSMUST00000164375.4|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr14_+_53941464_53941464	1.5122	Pitx2_Otx2	ENSMUST00000103664.6|Trav5-4|ENSMUSG00000095607.4|T cell receptor alpha variable 5-4
mm39_v1_chr17_-_57181420_57181460	1.51167	Pitx2_Otx2	ENSMUST00000043062.5|Acsbg2|ENSMUSG00000024207.9|acyl-CoA synthetase bubblegum family member 2
mm39_v1_chr9_+_20799471_20799593	1.50869	Pitx2_Otx2	ENSMUST00000004203.6|Ppan|ENSMUSG00000004100.13|peter pan homolog
mm39_v1_chrY_-_8069993_8069993	1.5082	Pitx2_Otx2	ENSMUST00000178396.2|Gm20825|ENSMUSG00000095324.3|predicted gene, 20825
mm39_v1_chr12_-_28685849_28685864	1.50661	Pitx2_Otx2	ENSMUST00000221871.2|Rps7|ENSMUSG00000061477.5|ribosomal protein S7
mm39_v1_chr18_-_78100610_78100622	1.50617	Pitx2_Otx2	ENSMUST00000170760.3|Siglec15|ENSMUSG00000091055.3|sialic acid binding Ig-like lectin 15
mm39_v1_chr7_+_97100523_97100539	1.50028	Pitx2_Otx2	ENSMUST00000206658.2|Kctd14|ENSMUSG00000051727.15|potassium channel tetramerisation domain containing 14
mm39_v1_chr11_-_59678462_59678520	1.49871	Pitx2_Otx2	ENSMUST00000125307.2|Pld6|ENSMUSG00000043648.8|phospholipase D family, member 6
mm39_v1_chr1_-_155908695_155908723	1.49788	Pitx2_Otx2	ENSMUST00000136397.8|Tor1aip1|ENSMUSG00000026466.17|torsin A interacting protein 1
mm39_v1_chr10_+_111000613_111000627	1.49597	Pitx2_Otx2	ENSMUST00000105275.9|Osbpl8|ENSMUSG00000020189.16|oxysterol binding protein-like 8
mm39_v1_chr2_-_84557580_84557643	1.49478	Pitx2_Otx2	ENSMUST00000165219.8|Clp1|ENSMUSG00000027079.16|CLP1, cleavage and polyadenylation factor I subunit
mm39_v1_chr17_-_47732798_47732810	1.49095	Pitx2_Otx2	ENSMUST00000073143.7|1700001C19Rik|ENSMUSG00000047150.9|RIKEN cDNA 1700001C19 gene
mm39_v1_chr9_-_103980200_103980229	1.48947	Pitx2_Otx2	ENSMUST00000188000.2|Ackr4|ENSMUSG00000079355.6|atypical chemokine receptor 4
mm39_v1_chr5_+_143166759_143166786	1.48907	Pitx2_Otx2	ENSMUST00000031574.10|Spdye4b|ENSMUSG00000029586.10|speedy/RINGO cell cycle regulator family, member E4B
mm39_v1_chr17_+_34354556_34354645	1.47793	Pitx2_Otx2	ENSMUST00000236322.2|H2-DMa|ENSMUSG00000037649.11|histocompatibility 2, class II, locus DMa	ENSMUST00000237402.2|H2-DMa|ENSMUSG00000037649.11|histocompatibility 2, class II, locus DMa
mm39_v1_chr10_+_128744689_128744796	1.47784	Pitx2_Otx2	ENSMUST00000105229.9|Cd63|ENSMUSG00000025351.15|CD63 antigen
mm39_v1_chr7_+_127172547_127172609	1.47667	Pitx2_Otx2	ENSMUST00000033086.8|Phkg2|ENSMUSG00000030815.12|phosphorylase kinase, gamma 2 (testis)
mm39_v1_chr14_-_17338198_17338254	1.47332	Pitx2_Otx2	ENSMUST00000165713.8|Gm8279|ENSMUSG00000079378.9|predicted gene 8279	ENSMUST00000112767.9|Gm8279|ENSMUSG00000079378.9|predicted gene 8279
mm39_v1_chr1_-_151376704_151376711	1.47218	Pitx2_Otx2	ENSMUST00000076110.11|Rnf2|ENSMUSG00000026484.14|ring finger protein 2
mm39_v1_chr6_-_72498676_72498690	1.47075	Pitx2_Otx2	ENSMUST00000234615.2|Sh2d6|ENSMUSG00000052631.16|SH2 domain containing 6
mm39_v1_chr11_+_105069591_105069633	1.46974	Pitx2_Otx2	ENSMUST00000106939.9|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)
mm39_v1_chr3_+_103716836_103716954	1.46938	Pitx2_Otx2	ENSMUST00000076599.8|Ap4b1|ENSMUSG00000032952.12|adaptor-related protein complex AP-4, beta 1	ENSMUST00000106824.8|Ap4b1|ENSMUSG00000032952.12|adaptor-related protein complex AP-4, beta 1	ENSMUST00000106823.8|Ap4b1|ENSMUSG00000032952.12|adaptor-related protein complex AP-4, beta 1	ENSMUST00000047285.7|Ap4b1|ENSMUSG00000032952.12|adaptor-related protein complex AP-4, beta 1
mm39_v1_chr9_-_22041894_22041935	1.46827	Pitx2_Otx2	ENSMUST00000115315.3|Acp5|ENSMUSG00000001348.16|acid phosphatase 5, tartrate resistant
mm39_v1_chr6_-_68840015_68840032	1.46693	Pitx2_Otx2	ENSMUST00000103336.2|Igkv1-88|ENSMUSG00000076535.2|immunoglobulin kappa chain variable 1-88
mm39_v1_chr4_+_109092610_109092610	1.46598	Pitx2_Otx2	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr14_-_52257113_52257170	1.4658	Pitx2_Otx2	ENSMUST00000166169.4|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219	ENSMUST00000226605.2|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219
mm39_v1_chr2_+_180961507_180961580	1.46246	Pitx2_Otx2	ENSMUST00000098971.11|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1	ENSMUST00000054622.15|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1	ENSMUST00000108814.8|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1	ENSMUST00000048608.16|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1	ENSMUST00000108815.8|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1
mm39_v1_chr16_+_26281885_26282006	1.45929	Pitx2_Otx2	ENSMUST00000161053.8|Cldn16|ENSMUSG00000038148.14|claudin 16	ENSMUST00000115302.2|Cldn16|ENSMUSG00000038148.14|claudin 16
mm39_v1_chr15_-_98779269_98779361	1.45678	Pitx2_Otx2	ENSMUST00000024518.11|Rhebl1|ENSMUSG00000023755.11|Ras homolog enriched in brain like 1
mm39_v1_chr9_-_58156982_58157078	1.45589	Pitx2_Otx2	ENSMUST00000135310.8|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000085673.11|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000114136.9|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000153820.8|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000124982.2|Pml|ENSMUSG00000036986.17|promyelocytic leukemia
mm39_v1_chr6_+_70332836_70332836	1.45354	Pitx2_Otx2	ENSMUST00000103390.3|Igkv8-18|ENSMUSG00000076589.3|immunoglobulin kappa variable 8-18
mm39_v1_chr11_-_106890307_106890367	1.44669	Pitx2_Otx2	ENSMUST00000018506.13|Kpna2|ENSMUSG00000018362.15|karyopherin (importin) alpha 2
mm39_v1_chr1_-_151376544_151376589	1.44374	Pitx2_Otx2	ENSMUST00000187991.2|Rnf2|ENSMUSG00000026484.14|ring finger protein 2	ENSMUST00000187048.7|Rnf2|ENSMUSG00000026484.14|ring finger protein 2	ENSMUST00000186415.7|Rnf2|ENSMUSG00000026484.14|ring finger protein 2
mm39_v1_chr10_-_62438040_62438070	1.44052	Pitx2_Otx2	ENSMUST00000045866.9|Ddx21|ENSMUSG00000020075.9|DExD box helicase 21
mm39_v1_chr6_+_70495224_70495236	1.43833	Pitx2_Otx2	ENSMUST00000103396.2|Igkv3-12|ENSMUSG00000094117.2|immunoglobulin kappa variable 3-12
mm39_v1_chr5_-_136003294_136003406	1.43632	Pitx2_Otx2	ENSMUST00000154181.2|Ssc4d|ENSMUSG00000029699.14|scavenger receptor cysteine rich family, 4 domains	ENSMUST00000111152.8|Ssc4d|ENSMUSG00000029699.14|scavenger receptor cysteine rich family, 4 domains	ENSMUST00000111153.8|Ssc4d|ENSMUSG00000029699.14|scavenger receptor cysteine rich family, 4 domains
mm39_v1_chr1_+_134038970_134038986	1.43621	Pitx2_Otx2	ENSMUST00000159963.8|Chit1|ENSMUSG00000026450.15|chitinase 1 (chitotriosidase)	ENSMUST00000160060.8|Chit1|ENSMUSG00000026450.15|chitinase 1 (chitotriosidase)
mm39_v1_chr16_+_10652910_10652948	1.42584	Pitx2_Otx2	ENSMUST00000037913.9|Rmi2|ENSMUSG00000037991.10|RecQ mediated genome instability 2
mm39_v1_chr11_+_100513696_100513707	1.42233	Pitx2_Otx2	ENSMUST00000017981.10|Nkiras2|ENSMUSG00000017837.13|NFKB inhibitor interacting Ras-like protein 2
mm39_v1_chr13_-_97235745_97235745	1.41955	Pitx2_Otx2	ENSMUST00000071118.7|Gm6169|ENSMUSG00000057762.7|predicted gene 6169
mm39_v1_chr1_+_165957784_165957807	1.41338	Pitx2_Otx2	ENSMUST00000060833.14|Gpa33|ENSMUSG00000000544.15|glycoprotein A33 (transmembrane)
mm39_v1_chr12_-_85143852_85143865	1.41327	Pitx2_Otx2	ENSMUST00000177289.9|Prox2|ENSMUSG00000042320.18|prospero homeobox 2
mm39_v1_chr8_-_11528615_11528710	1.40807	Pitx2_Otx2	ENSMUST00000033900.7|Rab20|ENSMUSG00000031504.7|RAB20, member RAS oncogene family
mm39_v1_chr9_-_50472605_50472617	1.40425	Pitx2_Otx2	ENSMUST00000034568.7|Tex12|ENSMUSG00000032065.7|testis expressed 12
mm39_v1_chr11_+_83599841_83599926	1.40104	Pitx2_Otx2	ENSMUST00000001009.14|Wfdc18|ENSMUSG00000000983.14|WAP four-disulfide core domain 18
mm39_v1_chr5_-_100126773_100126833	1.40016	Pitx2_Otx2	ENSMUST00000112939.10|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000171786.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000072750.13|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000019128.15|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000172361.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr10_+_51367052_51367224	1.39888	Pitx2_Otx2	ENSMUST00000217705.2|Lilrb4a|ENSMUSG00000112148.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4A	ENSMUST00000078778.5|Lilrb4a|ENSMUSG00000112148.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4A	ENSMUST00000220182.2|Lilrb4a|ENSMUSG00000112148.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4A	ENSMUST00000220226.2|Lilrb4a|ENSMUSG00000112148.2|leukocyte immunoglobulin-like receptor, subfamily B, member 4A
mm39_v1_chr16_-_36188086_36188128	1.39701	Pitx2_Otx2	ENSMUST00000096089.3|Cstdc5|ENSMUSG00000071561.3|cystatin domain containing 5
mm39_v1_chr8_+_13835612_13835659	1.39255	Pitx2_Otx2	ENSMUST00000043767.9|Upf3a|ENSMUSG00000038398.9|UPF3 regulator of nonsense transcripts homolog A (yeast)
mm39_v1_chr12_-_85327136_85327209	1.39137	Pitx2_Otx2	ENSMUST00000065913.8|Acyp1|ENSMUSG00000008822.16|acylphosphatase 1, erythrocyte (common) type	ENSMUST00000008966.13|Acyp1|ENSMUSG00000008822.16|acylphosphatase 1, erythrocyte (common) type
mm39_v1_chr17_+_34423054_34423084	1.39108	Pitx2_Otx2	ENSMUST00000138491.2|Tap2|ENSMUSG00000024339.13|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm39_v1_chr17_+_35278011_35278113	1.38243	Pitx2_Otx2	ENSMUST00000007255.13|Ddah2|ENSMUSG00000007039.13|dimethylarginine dimethylaminohydrolase 2	ENSMUST00000174493.8|Ddah2|ENSMUSG00000007039.13|dimethylarginine dimethylaminohydrolase 2
mm39_v1_chrX_-_52358663_52358735	1.38195	Pitx2_Otx2	ENSMUST00000114841.2|Fam122b|ENSMUSG00000036022.16|family with sequence similarity 122, member B	ENSMUST00000071023.12|Fam122b|ENSMUSG00000036022.16|family with sequence similarity 122, member B
mm39_v1_chrX_+_84913911_84913960	1.38012	Pitx2_Otx2	ENSMUST00000113976.2|Tasl|ENSMUSG00000025058.5|TLR adaptor interacting with endolysosomal SLC15A4
mm39_v1_chr5_+_115039359_115039414	1.37864	Pitx2_Otx2	ENSMUST00000124716.3|Oasl2|ENSMUSG00000029561.18|2'-5' oligoadenylate synthetase-like 2
mm39_v1_chr16_-_64591509_64591546	1.37779	Pitx2_Otx2	ENSMUST00000076991.7|4930453N24Rik|ENSMUSG00000059920.10|RIKEN cDNA 4930453N24 gene
mm39_v1_chr7_+_101916992_101917062	1.3772	Pitx2_Otx2	ENSMUST00000033289.6|Stim1|ENSMUSG00000030987.6|stromal interaction molecule 1	ENSMUST00000209255.2|Stim1|ENSMUSG00000030987.6|stromal interaction molecule 1
mm39_v1_chr6_-_124715618_124715677	1.37692	Pitx2_Otx2	ENSMUST00000171549.9|Ptpn6|ENSMUSG00000004266.16|protein tyrosine phosphatase, non-receptor type 6
mm39_v1_chr11_-_100510992_100511036	1.37582	Pitx2_Otx2	ENSMUST00000014339.15|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239490.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7	ENSMUST00000239410.2|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7
mm39_v1_chr15_-_99670751_99670786	1.37466	Pitx2_Otx2	ENSMUST00000175876.8|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr4_+_12140263_12140317	1.37186	Pitx2_Otx2	ENSMUST00000050069.9|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1	ENSMUST00000069128.8|Rbm12b1|ENSMUSG00000046667.15|RNA binding motif protein 12 B1
mm39_v1_chr7_-_139558599_139558680	1.37078	Pitx2_Otx2	ENSMUST00000209335.2|Spef1l|ENSMUSG00000073795.12|sperm flagellar 1 like	ENSMUST00000210254.2|Spef1l|ENSMUSG00000073795.12|sperm flagellar 1 like	ENSMUST00000121412.2|Spef1l|ENSMUSG00000073795.12|sperm flagellar 1 like	ENSMUST00000097970.9|Spef1l|ENSMUSG00000073795.12|sperm flagellar 1 like
mm39_v1_chr11_+_6339061_6339082	1.36938	Pitx2_Otx2	ENSMUST00000109787.8|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr14_+_67982630_67982718	1.36853	Pitx2_Otx2	ENSMUST00000223929.2|Gnrh1|ENSMUSG00000015812.9|gonadotropin releasing hormone 1	ENSMUST00000111095.4|Gnrh1|ENSMUSG00000015812.9|gonadotropin releasing hormone 1
mm39_v1_chrY_+_9783380_9783380	1.36719	Pitx2_Otx2	ENSMUST00000180352.2|Gm20821|ENSMUSG00000094556.3|predicted gene, 20821
mm39_v1_chr14_-_19281460_19281518	1.36594	Pitx2_Otx2	ENSMUST00000171150.8|Gm5795|ENSMUSG00000079409.9|predicted gene 5795	ENSMUST00000100920.10|Gm5795|ENSMUSG00000079409.9|predicted gene 5795
mm39_v1_chr5_-_127694436_127694490	1.36389	Pitx2_Otx2	ENSMUST00000031367.15|Slc15a4|ENSMUSG00000029416.18|solute carrier family 15, member 4
mm39_v1_chr2_+_152804405_152804430	1.36377	Pitx2_Otx2	ENSMUST00000099197.9|Ttll9|ENSMUSG00000074673.16|tubulin tyrosine ligase-like family, member 9	ENSMUST00000103155.10|Ttll9|ENSMUSG00000074673.16|tubulin tyrosine ligase-like family, member 9
mm39_v1_chr3_-_15491482_15491580	1.36135	Pitx2_Otx2	ENSMUST00000099201.9|Sirpb1a|ENSMUSG00000095788.7|signal-regulatory protein beta 1A	ENSMUST00000194144.3|Sirpb1a|ENSMUSG00000095788.7|signal-regulatory protein beta 1A	ENSMUST00000192700.3|Sirpb1a|ENSMUSG00000095788.7|signal-regulatory protein beta 1A
mm39_v1_chr7_-_29772226_29772349	1.36024	Pitx2_Otx2	ENSMUST00000183115.8|Zfp82|ENSMUSG00000098022.8|zinc finger protein 82	ENSMUST00000182919.8|Zfp82|ENSMUSG00000098022.8|zinc finger protein 82	ENSMUST00000183190.2|Zfp82|ENSMUSG00000098022.8|zinc finger protein 82	ENSMUST00000080834.15|Zfp82|ENSMUSG00000098022.8|zinc finger protein 82
mm39_v1_chr14_-_18835261_18835261	1.35763	Pitx2_Otx2	ENSMUST00000112802.9|Gm3012|ENSMUSG00000095368.8|predicted gene 3012
mm39_v1_chr14_-_19074680_19074680	1.35763	Pitx2_Otx2	ENSMUST00000112728.9|Gm10413|ENSMUSG00000095533.8|predicted gene 10413
mm39_v1_chr1_+_190830522_190830633	1.35435	Pitx2_Otx2	ENSMUST00000027943.6|Batf3|ENSMUSG00000026630.10|basic leucine zipper transcription factor, ATF-like 3
mm39_v1_chr14_-_54949596_54949631	1.35382	Pitx2_Otx2	ENSMUST00000064290.8|Cebpe|ENSMUSG00000052435.8|CCAAT/enhancer binding protein (C/EBP), epsilon
mm39_v1_chr4_-_6454262_6454330	1.35251	Pitx2_Otx2	ENSMUST00000029910.12|Nsmaf|ENSMUSG00000028245.16|neutral sphingomyelinase (N-SMase) activation associated factor
mm39_v1_chr7_-_102143980_102143980	1.35228	Pitx2_Otx2	ENSMUST00000058750.4|Olfr545|ENSMUSG00000044824.10|olfactory receptor 545
mm39_v1_chr3_-_152045986_152046055	1.35092	Pitx2_Otx2	ENSMUST00000199397.2|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000199334.5|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000068243.11|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000073089.13|Miga1|ENSMUSG00000054942.14|mitoguardin 1
mm39_v1_chrX_+_8970801_8970856	1.3491	Pitx2_Otx2	ENSMUST00000059967.2|4930402K13Rik|ENSMUSG00000045797.2|RIKEN cDNA 4930402K13 gene
mm39_v1_chr8_+_34143266_34143266	1.34898	Pitx2_Otx2	ENSMUST00000033992.9|Gsr|ENSMUSG00000031584.17|glutathione reductase
mm39_v1_chr11_-_109718860_109718899	1.34852	Pitx2_Otx2	ENSMUST00000106674.8|1700012B07Rik|ENSMUSG00000020617.14|RIKEN cDNA 1700012B07 gene
mm39_v1_chr2_+_113235475_113235502	1.34653	Pitx2_Otx2	ENSMUST00000238883.2|Fmn1|ENSMUSG00000044042.20|formin 1
mm39_v1_chr2_+_70339832_70339846	1.34652	Pitx2_Otx2	ENSMUST00000153121.2|Erich2|ENSMUSG00000075302.11|glutamate rich 2
mm39_v1_chr7_-_117715351_117715390	1.33298	Pitx2_Otx2	ENSMUST00000128482.8|Rps15a|ENSMUSG00000008683.17|ribosomal protein S15A	ENSMUST00000131840.3|Rps15a|ENSMUSG00000008683.17|ribosomal protein S15A
mm39_v1_chrX_-_80501727_80501727	1.33036	Pitx2_Otx2	ENSMUST00000080083.3|4930595M18Rik|ENSMUSG00000060673.3|RIKEN cDNA 4930595M18 gene
mm39_v1_chr2_-_34803988_34804055	1.32843	Pitx2_Otx2	ENSMUST00000028232.7|Phf19|ENSMUSG00000026873.10|PHD finger protein 19	ENSMUST00000202907.2|Phf19|ENSMUSG00000026873.10|PHD finger protein 19
mm39_v1_chr6_-_124715560_124715588	1.32302	Pitx2_Otx2	ENSMUST00000004377.15|Ptpn6|ENSMUSG00000004266.16|protein tyrosine phosphatase, non-receptor type 6
mm39_v1_chr1_+_84936703_84936703	1.31998	Pitx2_Otx2	ENSMUST00000239195.2|Gm15433|ENSMUSG00000118590.2|predicted pseudogene 15433
mm39_v1_chr10_-_23662948_23662987	1.31982	Pitx2_Otx2	ENSMUST00000220070.2|Rps12|ENSMUSG00000061983.8|ribosomal protein S12
mm39_v1_chr1_-_153683908_153683914	1.31025	Pitx2_Otx2	ENSMUST00000141249.8|Rgsl1|ENSMUSG00000042641.20|regulator of G-protein signaling like 1
mm39_v1_chr14_+_73380163_73380481	1.30763	Pitx2_Otx2	ENSMUST00000170368.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000171767.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000163533.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chr7_-_24423715_24423715	1.30382	Pitx2_Otx2	ENSMUST00000081657.6|Lypd11|ENSMUSG00000058717.9|Ly6/PLAUR domain containing 11
mm39_v1_chrY_-_9132561_9132561	1.30349	Pitx2_Otx2	ENSMUST00000171947.3|Gm21292|ENSMUSG00000091077.4|predicted gene, 21292
mm39_v1_chr6_+_129385893_129385918	1.30176	Pitx2_Otx2	ENSMUST00000204860.3|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a	ENSMUST00000164513.8|Clec9a|ENSMUSG00000046080.18|C-type lectin domain family 9, member a
mm39_v1_chr10_+_111000655_111000676	1.2975	Pitx2_Otx2	ENSMUST00000095310.3|Osbpl8|ENSMUSG00000020189.16|oxysterol binding protein-like 8
mm39_v1_chr1_-_155108455_155108486	1.29497	Pitx2_Otx2	ENSMUST00000035914.5|BC034090|ENSMUSG00000033722.10|cDNA sequence BC034090
mm39_v1_chrY_-_84576176_84576176	1.29422	Pitx2_Otx2	ENSMUST00000189463.2|Gm21394|ENSMUSG00000094660.3|predicted gene, 21394
mm39_v1_chr5_+_115644727_115644915	1.29264	Pitx2_Otx2	ENSMUST00000067268.15|Pxn|ENSMUSG00000029528.20|paxillin	ENSMUST00000086523.7|Pxn|ENSMUSG00000029528.20|paxillin	ENSMUST00000212819.3|Pxn|ENSMUSG00000029528.20|paxillin
mm39_v1_chr4_-_120782198_120782218	1.29229	Pitx2_Otx2	ENSMUST00000030375.9|Exo5|ENSMUSG00000028629.10|exonuclease 5	ENSMUST00000177880.2|Exo5|ENSMUSG00000028629.10|exonuclease 5	ENSMUST00000156836.2|Exo5|ENSMUSG00000028629.10|exonuclease 5
mm39_v1_chrX_-_134528431_134528454	1.2916	Pitx2_Otx2	ENSMUST00000113159.8|Pramex1|ENSMUSG00000031411.12|PRAME like, X-linked 1
mm39_v1_chrY_+_2830680_2830699	1.29131	Pitx2_Otx2	ENSMUST00000171534.8|Rbmy|ENSMUSG00000094658.8|RNA binding motif protein, Y chromosome	ENSMUST00000100360.5|Rbmy|ENSMUSG00000094658.8|RNA binding motif protein, Y chromosome	ENSMUST00000179404.8|Gm10256|ENSMUSG00000095852.8|predicted gene 10256
mm39_v1_chr15_-_76524097_76524158	1.2909	Pitx2_Otx2	ENSMUST00000168185.8|Tonsl|ENSMUSG00000059323.15|tonsoku-like, DNA repair protein
mm39_v1_chr1_-_75208734_75208734	1.28882	Pitx2_Otx2	ENSMUST00000180101.3|A630095N17Rik|ENSMUSG00000096094.3|RIKEN cDNA A630095N17 gene
mm39_v1_chr6_+_65019574_65019651	1.28534	Pitx2_Otx2	ENSMUST00000031984.9|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	ENSMUST00000205118.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr16_+_32238520_32238564	1.28491	Pitx2_Otx2	ENSMUST00000014220.15|Dynlt2b|ENSMUSG00000014075.16|dynein light chain Tctex-type 2B	ENSMUST00000080316.8|Dynlt2b|ENSMUSG00000014075.16|dynein light chain Tctex-type 2B
mm39_v1_chr14_+_15695362_15695420	1.28251	Pitx2_Otx2	ENSMUST00000170673.2|Gm8362|ENSMUSG00000090404.8|predicted gene 8362	ENSMUST00000168790.8|Gm8362|ENSMUSG00000090404.8|predicted gene 8362
mm39_v1_chr14_-_86986541_86986569	1.28102	Pitx2_Otx2	ENSMUST00000226254.2|Diaph3|ENSMUSG00000022021.15|diaphanous related formin 3
mm39_v1_chr5_-_135423353_135423412	1.277	Pitx2_Otx2	ENSMUST00000111171.6|Pom121|ENSMUSG00000053293.10|nuclear pore membrane protein 121
mm39_v1_chr7_+_19115929_19115977	1.27323	Pitx2_Otx2	ENSMUST00000062831.16|Ercc2|ENSMUSG00000030400.18|excision repair cross-complementing rodent repair deficiency, complementation group 2	ENSMUST00000108461.8|Ercc2|ENSMUSG00000030400.18|excision repair cross-complementing rodent repair deficiency, complementation group 2	ENSMUST00000108460.8|Ercc2|ENSMUSG00000030400.18|excision repair cross-complementing rodent repair deficiency, complementation group 2
mm39_v1_chr2_-_130021229_130021323	1.272	Pitx2_Otx2	ENSMUST00000103199.9|Snrpb|ENSMUSG00000027404.17|small nuclear ribonucleoprotein B
mm39_v1_chr9_-_63509699_63509742	1.272	Pitx2_Otx2	ENSMUST00000171243.2|Iqch|ENSMUSG00000037801.14|IQ motif containing H	ENSMUST00000163982.8|Iqch|ENSMUSG00000037801.14|IQ motif containing H	ENSMUST00000163624.8|Iqch|ENSMUSG00000037801.14|IQ motif containing H
mm39_v1_chr5_+_110378841_110378970	1.26817	Pitx2_Otx2	ENSMUST00000197188.5|Ankle2|ENSMUSG00000029501.15|ankyrin repeat and LEM domain containing 2	ENSMUST00000086674.10|Ankle2|ENSMUSG00000029501.15|ankyrin repeat and LEM domain containing 2	ENSMUST00000031474.11|Ankle2|ENSMUSG00000029501.15|ankyrin repeat and LEM domain containing 2
mm39_v1_chrY_-_9345654_9345654	1.26269	Pitx2_Otx2	ENSMUST00000179590.2|Gm21812|ENSMUSG00000094773.3|predicted gene, 21812
mm39_v1_chr8_+_123920682_123920728	1.26141	Pitx2_Otx2	ENSMUST00000212409.2|Dpep1|ENSMUSG00000019278.6|dipeptidase 1
mm39_v1_chr15_+_79555056_79555092	1.26125	Pitx2_Otx2	ENSMUST00000023062.5|Tomm22|ENSMUSG00000022427.5|translocase of outer mitochondrial membrane 22
mm39_v1_chr11_-_3845085_3845104	1.26004	Pitx2_Otx2	ENSMUST00000020712.5|4921536K21Rik|ENSMUSG00000020434.5|RIKEN cDNA 4921536K21 gene
mm39_v1_chr3_-_146391230_146391347	1.25996	Pitx2_Otx2	ENSMUST00000197989.2|Samd13|ENSMUSG00000048652.13|sterile alpha motif domain containing 13	ENSMUST00000125965.8|Samd13|ENSMUSG00000048652.13|sterile alpha motif domain containing 13
mm39_v1_chr13_-_63006176_63006236	1.25613	Pitx2_Otx2	ENSMUST00000021907.9|Fbp2|ENSMUSG00000021456.9|fructose bisphosphatase 2
mm39_v1_chr10_+_57527084_57527110	1.25571	Pitx2_Otx2	ENSMUST00000175852.2|Pkib|ENSMUSG00000019876.16|protein kinase inhibitor beta, cAMP dependent, testis specific
mm39_v1_chr6_+_30541581_30541649	1.25139	Pitx2_Otx2	ENSMUST00000096066.5|Cpa2|ENSMUSG00000071553.11|carboxypeptidase A2, pancreatic
mm39_v1_chr1_-_55066629_55066645	1.24855	Pitx2_Otx2	ENSMUST00000027127.14|Sf3b1|ENSMUSG00000025982.14|splicing factor 3b, subunit 1
mm39_v1_chr12_-_32258604_32258683	1.2463	Pitx2_Otx2	ENSMUST00000053215.14|Pik3cg|ENSMUSG00000020573.18|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
mm39_v1_chr11_+_72938609_72938728	1.24548	Pitx2_Otx2	ENSMUST00000021135.5|Ncbp3|ENSMUSG00000020783.15|nuclear cap binding subunit 3
mm39_v1_chr17_-_32540093_32540176	1.24479	Pitx2_Otx2	ENSMUST00000002699.7|Akap8|ENSMUSG00000024045.7|A kinase (PRKA) anchor protein 8
mm39_v1_chr5_-_100946434_100946476	1.24356	Pitx2_Otx2	ENSMUST00000044684.14|Helq|ENSMUSG00000035266.17|helicase, POLQ-like
mm39_v1_chr9_+_108269992_108270011	1.24255	Pitx2_Otx2	ENSMUST00000192995.6|1700102P08Rik|ENSMUSG00000032611.10|RIKEN cDNA 1700102P08 gene
mm39_v1_chrX_+_56454507_56454520	1.24205	Pitx2_Otx2	ENSMUST00000114725.3|Tm9sf5|ENSMUSG00000079584.3|transmembrane 9 superfamily member 5
mm39_v1_chr14_+_16343966_16344026	1.24193	Pitx2_Otx2	ENSMUST00000112742.4|Gm3476|ENSMUSG00000079371.10|predicted gene 3476	ENSMUST00000167913.8|Gm3476|ENSMUSG00000079371.10|predicted gene 3476
mm39_v1_chr6_-_124715542_124715554	1.23476	Pitx2_Otx2	ENSMUST00000174265.2|Ptpn6|ENSMUSG00000004266.16|protein tyrosine phosphatase, non-receptor type 6
mm39_v1_chr12_-_113680723_113680723	1.23276	Pitx2_Otx2	ENSMUST00000179657.2|Ighv2-6|ENSMUSG00000096670.2|immunoglobulin heavy variable 2-6
mm39_v1_chr13_-_65200574_65200637	1.23066	Pitx2_Otx2	ENSMUST00000203968.3|Prss47|ENSMUSG00000090658.8|protease, serine 47
mm39_v1_chr14_-_17760477_17760535	1.22467	Pitx2_Otx2	ENSMUST00000171305.2|Gm7876|ENSMUSG00000091700.8|predicted gene 7876	ENSMUST00000169465.8|Gm7876|ENSMUSG00000091700.8|predicted gene 7876
mm39_v1_chr9_-_100368841_100368841	1.22333	Pitx2_Otx2	ENSMUST00000098458.4|Il20rb|ENSMUSG00000044244.19|interleukin 20 receptor beta
mm39_v1_chr7_-_25098122_25098146	1.22233	Pitx2_Otx2	ENSMUST00000105177.3|Lipe|ENSMUSG00000003123.16|lipase, hormone sensitive	ENSMUST00000149349.2|Lipe|ENSMUSG00000003123.16|lipase, hormone sensitive
mm39_v1_chr14_-_18152432_18152490	1.21858	Pitx2_Otx2	ENSMUST00000171810.8|Gm3149|ENSMUSG00000079389.11|predicted gene 3149	ENSMUST00000112779.10|Gm3149|ENSMUSG00000079389.11|predicted gene 3149
mm39_v1_chr14_+_15137378_15137378	1.21637	Pitx2_Otx2	ENSMUST00000100886.4|Gm5797|ENSMUSG00000072726.4|predicted gene 5797
mm39_v1_chr18_-_3309723_3309778	1.21528	Pitx2_Otx2	ENSMUST00000152108.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator	ENSMUST00000136961.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr9_-_6269846_6269846	1.21444	Pitx2_Otx2	ENSMUST00000051706.6|Ddi1|ENSMUSG00000047619.6|DNA-damage inducible 1
mm39_v1_chr13_-_12479804_12479842	1.21147	Pitx2_Otx2	ENSMUST00000124888.8|Lgals8|ENSMUSG00000057554.14|lectin, galactose binding, soluble 8
mm39_v1_chr12_-_32258469_32258513	1.21105	Pitx2_Otx2	ENSMUST00000085469.6|Pik3cg|ENSMUSG00000020573.18|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
mm39_v1_chr7_-_101552989_101552995	1.21017	Pitx2_Otx2	ENSMUST00000106969.9|Tomt|ENSMUSG00000078630.9|transmembrane O-methyltransferase
mm39_v1_chr4_-_116664729_116664837	1.2097	Pitx2_Otx2	ENSMUST00000106455.8|Toe1|ENSMUSG00000028688.14|target of EGR1, member 1 (nuclear)	ENSMUST00000030451.10|Toe1|ENSMUSG00000028688.14|target of EGR1, member 1 (nuclear)
mm39_v1_chr7_+_4918199_4918229	1.20702	Pitx2_Otx2	ENSMUST00000116354.4|Zfp628|ENSMUSG00000074406.6|zinc finger protein 628
mm39_v1_chr7_+_140776763_140776847	1.20687	Pitx2_Otx2	ENSMUST00000144008.2|Lrrc56|ENSMUSG00000038637.16|leucine rich repeat containing 56
mm39_v1_chr2_-_151815759_151815886	1.2039	Pitx2_Otx2	ENSMUST00000109865.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A	ENSMUST00000109864.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A
mm39_v1_chr1_-_13660027_13660134	1.20206	Pitx2_Otx2	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr11_+_94901104_94901119	1.19828	Pitx2_Otx2	ENSMUST00000124735.2|Samd14|ENSMUSG00000047181.13|sterile alpha motif domain containing 14
mm39_v1_chr11_-_103247150_103247211	1.19782	Pitx2_Otx2	ENSMUST00000136491.3|Arhgap27|ENSMUSG00000034255.18|Rho GTPase activating protein 27	ENSMUST00000107023.3|Arhgap27|ENSMUSG00000034255.18|Rho GTPase activating protein 27
mm39_v1_chr15_+_84926909_84926943	1.19758	Pitx2_Otx2	ENSMUST00000229203.2|Fam118a|ENSMUSG00000022434.9|family with sequence similarity 118, member A
mm39_v1_chr8_-_70963202_70963234	1.19608	Pitx2_Otx2	ENSMUST00000125184.8|Uba52|ENSMUSG00000090137.9|ubiquitin A-52 residue ribosomal protein fusion product 1
mm39_v1_chr8_-_112026854_112026874	1.18785	Pitx2_Otx2	ENSMUST00000038739.5|Rfwd3|ENSMUSG00000033596.6|ring finger and WD repeat domain 3
mm39_v1_chr9_-_50472620_50472632	1.18699	Pitx2_Otx2	ENSMUST00000217236.2|Tex12|ENSMUSG00000032065.7|testis expressed 12
mm39_v1_chr9_+_118335294_118335357	1.18423	Pitx2_Otx2	ENSMUST00000084820.6|Golga4|ENSMUSG00000038708.11|golgi autoantigen, golgin subfamily a, 4
mm39_v1_chr19_+_3991522_3991537	1.18339	Pitx2_Otx2	ENSMUST00000237030.2|Unc93b1|ENSMUSG00000036908.18|unc-93 homolog B1, TLR signaling regulator
mm39_v1_chr17_+_80614795_80614854	1.18284	Pitx2_Otx2	ENSMUST00000223878.2|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33	ENSMUST00000068175.6|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33	ENSMUST00000224391.2|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33
mm39_v1_chr15_+_76763431_76763459	1.17966	Pitx2_Otx2	ENSMUST00000023179.7|Zfp7|ENSMUSG00000033669.9|zinc finger protein 7
mm39_v1_chr10_+_57527073_57527081	1.17668	Pitx2_Otx2	ENSMUST00000066028.13|Pkib|ENSMUSG00000019876.16|protein kinase inhibitor beta, cAMP dependent, testis specific
mm39_v1_chrX_-_36368176_36368181	1.17363	Pitx2_Otx2	ENSMUST00000130324.2|Upf3b|ENSMUSG00000036572.17|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm39_v1_chr1_-_173301492_173301492	1.1719	Pitx2_Otx2	ENSMUST00000169797.2|Ifi206|ENSMUSG00000037849.9|interferon activated gene 206
mm39_v1_chr11_+_61847589_61847617	1.1703	Pitx2_Otx2	ENSMUST00000201671.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000202178.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1
mm39_v1_chr17_-_28841370_28841496	1.16885	Pitx2_Otx2	ENSMUST00000233129.2|Srpk1|ENSMUSG00000004865.17|serine/arginine-rich protein specific kinase 1	ENSMUST00000232751.2|Srpk1|ENSMUSG00000004865.17|serine/arginine-rich protein specific kinase 1	ENSMUST00000233794.2|Srpk1|ENSMUSG00000004865.17|serine/arginine-rich protein specific kinase 1	ENSMUST00000114767.3|Srpk1|ENSMUSG00000004865.17|serine/arginine-rich protein specific kinase 1
mm39_v1_chr15_-_71826243_71826273	1.16686	Pitx2_Otx2	ENSMUST00000229585.2|Col22a1|ENSMUSG00000079022.11|collagen, type XXII, alpha 1
mm39_v1_chr1_-_86510222_86510287	1.16583	Pitx2_Otx2	ENSMUST00000027444.15|Pde6d|ENSMUSG00000026239.15|phosphodiesterase 6D, cGMP-specific, rod, delta	ENSMUST00000146220.2|Pde6d|ENSMUSG00000026239.15|phosphodiesterase 6D, cGMP-specific, rod, delta
mm39_v1_chr13_+_33211392_33211401	1.1626	Pitx2_Otx2	ENSMUST00000006392.3|Serpinb9b|ENSMUSG00000021403.4|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm39_v1_chr6_+_86415342_86415386	1.16171	Pitx2_Otx2	ENSMUST00000050497.14|C87436|ENSMUSG00000046679.17|expressed sequence C87436	ENSMUST00000203568.3|C87436|ENSMUSG00000046679.17|expressed sequence C87436
mm39_v1_chr10_-_103072141_103072189	1.16155	Pitx2_Otx2	ENSMUST00000123364.2|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1	ENSMUST00000166240.8|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1	ENSMUST00000020043.12|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1
mm39_v1_chr14_-_17987965_17988028	1.16107	Pitx2_Otx2	ENSMUST00000167902.2|Gm3182|ENSMUSG00000091148.8|predicted gene 3182	ENSMUST00000169364.8|Gm3182|ENSMUSG00000091148.8|predicted gene 3182
mm39_v1_chr6_+_70640233_70640259	1.15991	Pitx2_Otx2	ENSMUST00000103400.3|Igkv3-5|ENSMUSG00000095335.3|immunoglobulin kappa chain variable 3-5
mm39_v1_chr10_+_70010839_70010877	1.15729	Pitx2_Otx2	ENSMUST00000156001.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6	ENSMUST00000135607.2|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr7_-_4527228_4527356	1.15624	Pitx2_Otx2	ENSMUST00000154913.2|Tnni3|ENSMUSG00000035458.16|troponin I, cardiac 3
mm39_v1_chr1_-_132953068_132953154	1.15501	Pitx2_Otx2	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr10_+_80538482_80538593	1.15352	Pitx2_Otx2	ENSMUST00000095426.5|Izumo4|ENSMUSG00000055862.8|IZUMO family member 4
mm39_v1_chr11_-_120238917_120239020	1.15299	Pitx2_Otx2	ENSMUST00000106215.11|Actg1|ENSMUSG00000062825.16|actin, gamma, cytoplasmic 1
mm39_v1_chr2_+_165834546_165834563	1.15079	Pitx2_Otx2	ENSMUST00000109252.8|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3	ENSMUST00000088095.6|Ncoa3|ENSMUSG00000027678.18|nuclear receptor coactivator 3
mm39_v1_chr17_-_34043502_34043536	1.15013	Pitx2_Otx2	ENSMUST00000087342.13|Rps28|ENSMUSG00000067288.14|ribosomal protein S28	ENSMUST00000173844.8|Rps28|ENSMUSG00000067288.14|ribosomal protein S28
mm39_v1_chr5_-_21629661_21629684	1.14944	Pitx2_Otx2	ENSMUST00000115245.8|Ccdc146|ENSMUSG00000064280.15|coiled-coil domain containing 146	ENSMUST00000030552.7|Ccdc146|ENSMUSG00000064280.15|coiled-coil domain containing 146
mm39_v1_chr4_-_135714465_135714580	1.14223	Pitx2_Otx2	ENSMUST00000105851.9|Pithd1|ENSMUSG00000028669.16|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
mm39_v1_chr8_+_95393228_95393304	1.14209	Pitx2_Otx2	ENSMUST00000034228.16|Arl2bp|ENSMUSG00000031776.18|ADP-ribosylation factor-like 2 binding protein
mm39_v1_chr6_+_70680515_70680562	1.1398	Pitx2_Otx2	ENSMUST00000103404.2|Igkv3-1|ENSMUSG00000095682.2|immunoglobulin kappa variable 3-1
mm39_v1_chr6_-_115739284_115739371	1.13946	Pitx2_Otx2	ENSMUST00000166254.7|Tmem40|ENSMUSG00000059900.15|transmembrane protein 40	ENSMUST00000170625.8|Tmem40|ENSMUSG00000059900.15|transmembrane protein 40
mm39_v1_chr6_+_140568366_140568389	1.13815	Pitx2_Otx2	ENSMUST00000032359.15|Aebp2|ENSMUSG00000030232.19|AE binding protein 2
mm39_v1_chr11_+_96822213_96822342	1.1366	Pitx2_Otx2	ENSMUST00000107633.2|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr10_-_118076685_118076685	1.13369	Pitx2_Otx2	ENSMUST00000219147.2|Gm32717|ENSMUSG00000112216.2|predicted gene, 32717
mm39_v1_chr9_-_7873171_7873192	1.13221	Pitx2_Otx2	ENSMUST00000159323.2|Birc3|ENSMUSG00000032000.18|baculoviral IAP repeat-containing 3	ENSMUST00000115673.3|Birc3|ENSMUSG00000032000.18|baculoviral IAP repeat-containing 3
mm39_v1_chr7_-_140680437_140680498	1.13152	Pitx2_Otx2	ENSMUST00000210167.2|Sigirr|ENSMUSG00000025494.9|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	ENSMUST00000209294.2|Sigirr|ENSMUSG00000025494.9|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	ENSMUST00000097958.3|Sigirr|ENSMUSG00000025494.9|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
mm39_v1_chr8_+_121215155_121215229	1.1309	Pitx2_Otx2	ENSMUST00000034279.16|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr16_+_4559426_4559452	1.12466	Pitx2_Otx2	ENSMUST00000120232.8|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2
mm39_v1_chr15_+_99936516_99936552	1.1244	Pitx2_Otx2	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr15_+_91083678_91083700	1.12283	Pitx2_Otx2	ENSMUST00000190436.7|CN725425|ENSMUSG00000078932.9|cDNA sequence CN725425
mm39_v1_chr2_+_29651540_29651579	1.12261	Pitx2_Otx2	ENSMUST00000113810.9|Gm13547|ENSMUSG00000075425.11|predicted gene 13547	ENSMUST00000113809.3|Gm13547|ENSMUSG00000075425.11|predicted gene 13547
mm39_v1_chr14_+_65842716_65842716	1.12006	Pitx2_Otx2	ENSMUST00000079469.7|Nuggc|ENSMUSG00000061356.14|nuclear GTPase, germinal center associated
mm39_v1_chr4_-_6454097_6454226	1.11286	Pitx2_Otx2	ENSMUST00000124344.2|Nsmaf|ENSMUSG00000028245.16|neutral sphingomyelinase (N-SMase) activation associated factor
mm39_v1_chr14_-_18304685_18304743	1.10927	Pitx2_Otx2	ENSMUST00000171866.8|Gm3127|ENSMUSG00000090764.9|predicted gene 3127	ENSMUST00000167839.8|Gm3127|ENSMUSG00000090764.9|predicted gene 3127
mm39_v1_chr1_+_91107725_91107777	1.10769	Pitx2_Otx2	ENSMUST00000188475.7|Ramp1|ENSMUSG00000034353.15|receptor (calcitonin) activity modifying protein 1	ENSMUST00000097648.6|Ramp1|ENSMUSG00000034353.15|receptor (calcitonin) activity modifying protein 1
mm39_v1_chr7_+_45267024_45267054	1.10665	Pitx2_Otx2	ENSMUST00000008605.6|Fut1|ENSMUSG00000008461.7|fucosyltransferase 1	ENSMUST00000209379.2|Fut1|ENSMUSG00000008461.7|fucosyltransferase 1
mm39_v1_chr11_-_86148344_86148376	1.10422	Pitx2_Otx2	ENSMUST00000136469.2|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2	ENSMUST00000018212.13|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2
mm39_v1_chr6_-_69678271_69678328	1.10417	Pitx2_Otx2	ENSMUST00000103363.2|Igkv4-50|ENSMUSG00000076562.2|immunoglobulin kappa variable 4-50
mm39_v1_chr19_-_8763609_8763680	1.10278	Pitx2_Otx2	ENSMUST00000177216.8|Taf6l|ENSMUSG00000003680.17|TATA-box binding protein associated factor 6 like	ENSMUST00000176610.9|Taf6l|ENSMUSG00000003680.17|TATA-box binding protein associated factor 6 like	ENSMUST00000177056.8|Taf6l|ENSMUSG00000003680.17|TATA-box binding protein associated factor 6 like
mm39_v1_chr1_+_40554513_40554596	1.10218	Pitx2_Otx2	ENSMUST00000027237.12|Il18rap|ENSMUSG00000026068.12|interleukin 18 receptor accessory protein
mm39_v1_chr4_+_109137462_109137513	1.09892	Pitx2_Otx2	ENSMUST00000102729.10|Eps15|ENSMUSG00000028552.14|epidermal growth factor receptor pathway substrate 15
mm39_v1_chr19_-_57185928_57185969	1.09717	Pitx2_Otx2	ENSMUST00000111544.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr10_+_80538115_80538260	1.09413	Pitx2_Otx2	ENSMUST00000218184.2|Izumo4|ENSMUSG00000055862.8|IZUMO family member 4
mm39_v1_chr11_-_58692770_58692793	1.0934	Pitx2_Otx2	ENSMUST00000094156.12|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000239007.2|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000238886.2|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B	ENSMUST00000060581.5|Fam183b|ENSMUSG00000049154.13|family with sequence similarity 183, member B
mm39_v1_chr6_-_113412708_113412723	1.09245	Pitx2_Otx2	ENSMUST00000032416.11|Cidec|ENSMUSG00000030278.12|cell death-inducing DFFA-like effector c	ENSMUST00000113089.8|Cidec|ENSMUSG00000030278.12|cell death-inducing DFFA-like effector c
mm39_v1_chr5_-_134485081_134485118	1.08846	Pitx2_Otx2	ENSMUST00000111244.5|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1
mm39_v1_chr2_+_90884349_90884475	1.08686	Pitx2_Otx2	ENSMUST00000067663.14|Psmc3|ENSMUSG00000002102.16|proteasome (prosome, macropain) 26S subunit, ATPase 3	ENSMUST00000002171.14|Psmc3|ENSMUSG00000002102.16|proteasome (prosome, macropain) 26S subunit, ATPase 3	ENSMUST00000111441.10|Psmc3|ENSMUSG00000002102.16|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm39_v1_chr4_+_122583055_122583075	1.08556	Pitx2_Otx2	ENSMUST00000024032.4|9530002B09Rik|ENSMUSG00000023263.4|RIKEN cDNA 9530002B09 gene
mm39_v1_chr4_-_156340276_156340404	1.08532	Pitx2_Otx2	ENSMUST00000220228.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11	ENSMUST00000218788.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11	ENSMUST00000179919.3|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11
mm39_v1_chr6_+_47930324_47930385	1.08361	Pitx2_Otx2	ENSMUST00000101445.11|Zfp956|ENSMUSG00000045466.19|zinc finger protein 956
mm39_v1_chr2_-_26184563_26184572	1.07969	Pitx2_Otx2	ENSMUST00000057224.4|Ccdc187|ENSMUSG00000048038.9|coiled-coil domain containing 187
mm39_v1_chr8_-_110292366_110292493	1.07813	Pitx2_Otx2	ENSMUST00000042601.9|Dhx38|ENSMUSG00000037993.9|DEAH (Asp-Glu-Ala-His) box polypeptide 38
mm39_v1_chr2_-_87504008_87504008	1.07668	Pitx2_Otx2	ENSMUST00000213835.2|Olfr1135|ENSMUSG00000075153.3|olfactory receptor 1135
mm39_v1_chr14_+_8507874_8507917	1.07516	Pitx2_Otx2	ENSMUST00000225325.2|Thoc7|ENSMUSG00000053453.10|THO complex 7
mm39_v1_chrX_-_111315519_111315519	1.07497	Pitx2_Otx2	ENSMUST00000124335.8|Satl1|ENSMUSG00000025527.10|spermidine/spermine N1-acetyl transferase-like 1
mm39_v1_chr18_-_24736848_24736900	1.0733	Pitx2_Otx2	ENSMUST00000070726.10|Slc39a6|ENSMUSG00000024270.12|solute carrier family 39 (metal ion transporter), member 6
mm39_v1_chr11_+_8998575_8998633	1.07218	Pitx2_Otx2	ENSMUST00000043285.5|Gm11992|ENSMUSG00000040978.5|predicted gene 11992
mm39_v1_chr12_+_87665639_87665639	1.0707	Pitx2_Otx2	ENSMUST00000164838.3|Eif1ad6|ENSMUSG00000092019.5|eukaryotic translation initiation factor 1A domain containing 6
mm39_v1_chrX_+_143100987_143101030	1.07048	Pitx2_Otx2	ENSMUST00000123710.8|Alg13|ENSMUSG00000041718.17|asparagine-linked glycosylation 13	ENSMUST00000149330.8|Alg13|ENSMUSG00000041718.17|asparagine-linked glycosylation 13
mm39_v1_chr17_-_15129766_15129786	1.06979	Pitx2_Otx2	ENSMUST00000228233.2|Wdr27|ENSMUSG00000046991.13|WD repeat domain 27
mm39_v1_chr1_-_23948764_23948787	1.06838	Pitx2_Otx2	ENSMUST00000129254.8|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chr9_-_121471162_121471162	1.06713	Pitx2_Otx2	ENSMUST00000120918.8|Lyzl4|ENSMUSG00000032530.15|lysozyme-like 4
mm39_v1_chr9_-_26772119_26772165	1.06571	Pitx2_Otx2	ENSMUST00000034448.6|Glb1l3|ENSMUSG00000031966.8|galactosidase, beta 1 like 3
mm39_v1_chr19_-_57185861_57185893	1.06217	Pitx2_Otx2	ENSMUST00000111550.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr15_-_88838605_88838631	1.06191	Pitx2_Otx2	ENSMUST00000109371.8|Ttll8|ENSMUSG00000022388.15|tubulin tyrosine ligase-like family, member 8
mm39_v1_chr1_+_165958036_165958048	1.05914	Pitx2_Otx2	ENSMUST00000166860.2|Gpa33|ENSMUSG00000000544.15|glycoprotein A33 (transmembrane)
mm39_v1_chr8_+_85583611_85583665	1.0523	Pitx2_Otx2	ENSMUST00000003906.13|Farsa|ENSMUSG00000003808.19|phenylalanyl-tRNA synthetase, alpha subunit	ENSMUST00000109754.2|Farsa|ENSMUSG00000003808.19|phenylalanyl-tRNA synthetase, alpha subunit
mm39_v1_chr4_+_154096188_154096268	1.04689	Pitx2_Otx2	ENSMUST00000169622.8|Lrrc47|ENSMUSG00000029028.15|leucine rich repeat containing 47	ENSMUST00000030894.15|Lrrc47|ENSMUSG00000029028.15|leucine rich repeat containing 47
mm39_v1_chr17_-_71309815_71309873	1.04583	Pitx2_Otx2	ENSMUST00000123686.8|Myl12a|ENSMUSG00000024048.16|myosin, light chain 12A, regulatory, non-sarcomeric
mm39_v1_chr4_-_139079609_139079658	1.04567	Pitx2_Otx2	ENSMUST00000030513.13|Mrto4|ENSMUSG00000028741.14|mRNA turnover 4, ribosome maturation factor	ENSMUST00000155257.8|Mrto4|ENSMUSG00000028741.14|mRNA turnover 4, ribosome maturation factor
mm39_v1_chr9_+_108815078_108815078	1.04294	Pitx2_Otx2	ENSMUST00000052724.5|Ucn2|ENSMUSG00000049699.5|urocortin 2
mm39_v1_chr1_-_75101826_75101855	1.04251	Pitx2_Otx2	ENSMUST00000152855.3|Nhej1|ENSMUSG00000026162.9|non-homologous end joining factor 1
mm39_v1_chr19_-_57185808_57185849	1.04157	Pitx2_Otx2	ENSMUST00000111546.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr15_-_59888446_59888472	1.03962	Pitx2_Otx2	ENSMUST00000096421.4|4933412E24Rik|ENSMUSG00000071749.4|RIKEN cDNA 4933412E24 gene
mm39_v1_chr2_-_25101354_25101501	1.03616	Pitx2_Otx2	ENSMUST00000059849.15|Nelfb|ENSMUSG00000013465.20|negative elongation factor complex member B
mm39_v1_chr5_-_3943907_3943933	1.03383	Pitx2_Otx2	ENSMUST00000117463.2|Mterf1a|ENSMUSG00000040429.7|mitochondrial transcription termination factor 1a	ENSMUST00000044746.5|Mterf1a|ENSMUSG00000040429.7|mitochondrial transcription termination factor 1a
mm39_v1_chr5_-_139798992_139799007	1.03116	Pitx2_Otx2	ENSMUST00000110832.8|Tmem184a|ENSMUSG00000036687.14|transmembrane protein 184a
mm39_v1_chr15_+_95698574_95698603	1.02664	Pitx2_Otx2	ENSMUST00000226793.2|Ano6|ENSMUSG00000064210.8|anoctamin 6
mm39_v1_chr14_-_63746541_63746541	1.02535	Pitx2_Otx2	ENSMUST00000022522.15|Tdh|ENSMUSG00000021953.15|L-threonine dehydrogenase
mm39_v1_chrY_+_21164570_21164570	1.02518	Pitx2_Otx2	ENSMUST00000181205.2|Gm20909|ENSMUSG00000094294.3|predicted gene, 20909
mm39_v1_chr2_-_73143045_73143068	1.02158	Pitx2_Otx2	ENSMUST00000058615.10|Cir1|ENSMUSG00000041777.13|corepressor interacting with RBPJ, 1
mm39_v1_chr12_+_24548568_24548618	1.01879	Pitx2_Otx2	ENSMUST00000222710.2|Taf1b|ENSMUSG00000059669.9|TATA-box binding protein associated factor, RNA polymerase I, B
mm39_v1_chr14_+_26761023_26761036	1.01765	Pitx2_Otx2	ENSMUST00000223942.2|Il17rd|ENSMUSG00000040717.7|interleukin 17 receptor D
mm39_v1_chrX_-_136020873_136020920	1.01707	Pitx2_Otx2	ENSMUST00000113066.9|Esx1|ENSMUSG00000023443.14|extraembryonic, spermatogenesis, homeobox 1
mm39_v1_chr8_-_43760017_43760053	1.01552	Pitx2_Otx2	ENSMUST00000082120.5|Zfp42|ENSMUSG00000051176.7|zinc finger protein 42
mm39_v1_chr9_-_108444561_108444656	1.01409	Pitx2_Otx2	ENSMUST00000074208.6|Ndufaf3|ENSMUSG00000070283.5|NADH:ubiquinone oxidoreductase complex assembly factor 3
mm39_v1_chr7_+_40682143_40682143	1.01388	Pitx2_Otx2	ENSMUST00000164422.2|Gm4884|ENSMUSG00000048312.8|predicted gene 4884
mm39_v1_chr9_+_108880221_108880287	1.01242	Pitx2_Otx2	ENSMUST00000200629.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000200515.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000197689.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000196954.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000198376.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000197483.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000198295.5|Shisa5|ENSMUSG00000025647.17|shisa family member 5
mm39_v1_chr9_+_69305180_69305210	1.00941	Pitx2_Otx2	ENSMUST00000034761.15|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2	ENSMUST00000125938.2|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2
mm39_v1_chr16_-_56891711_56891747	1.0085	Pitx2_Otx2	ENSMUST00000067173.8|Tmem45a2|ENSMUSG00000046748.9|transmembrane protein 45A2	ENSMUST00000227043.2|Tmem45a2|ENSMUSG00000046748.9|transmembrane protein 45A2
mm39_v1_chr14_+_14874181_14874181	1.00159	Pitx2_Otx2	ENSMUST00000096148.11|Gm10338|ENSMUSG00000094706.9|predicted gene 10338
mm39_v1_chr11_-_84719779_84719798	1.00115	Pitx2_Otx2	ENSMUST00000047560.8|Dhrs11|ENSMUSG00000034449.8|dehydrogenase/reductase (SDR family) member 11
mm39_v1_chr7_+_101546059_101546168	0.99549	Pitx2_Otx2	ENSMUST00000143835.8|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr15_-_99670479_99670490	0.994346	Pitx2_Otx2	ENSMUST00000023762.13|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr4_+_146586445_146586484	0.993391	Pitx2_Otx2	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr9_-_26772174_26772193	0.992254	Pitx2_Otx2	ENSMUST00000210274.2|Glb1l3|ENSMUSG00000031966.8|galactosidase, beta 1 like 3
mm39_v1_chr13_-_64645606_64645606	0.991771	Pitx2_Otx2	ENSMUST00000180282.2|Fam240b|ENSMUSG00000096537.7|family with sequence similarity 240 member B
mm39_v1_chr17_-_74602469_74602540	0.991552	Pitx2_Otx2	ENSMUST00000233144.2|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1
mm39_v1_chr14_+_55129950_55129961	0.991168	Pitx2_Otx2	ENSMUST00000140691.8|Pabpn1|ENSMUSG00000022194.16|poly(A) binding protein, nuclear 1
mm39_v1_chr10_-_128237087_128237103	0.990461	Pitx2_Otx2	ENSMUST00000042666.13|Slc39a5|ENSMUSG00000039878.14|solute carrier family 39 (metal ion transporter), member 5
mm39_v1_chr5_+_137516810_137516810	0.990088	Pitx2_Otx2	ENSMUST00000197624.5|Gigyf1|ENSMUSG00000029714.12|GRB10 interacting GYF protein 1
mm39_v1_chr7_-_19655063_19655085	0.989447	Pitx2_Otx2	ENSMUST00000043517.8|Pvr|ENSMUSG00000040511.15|poliovirus receptor
mm39_v1_chr10_+_39488930_39488930	0.98699	Pitx2_Otx2	ENSMUST00000019987.7|Traf3ip2|ENSMUSG00000019842.7|TRAF3 interacting protein 2
mm39_v1_chr9_+_107457316_107457316	0.984856	Pitx2_Otx2	ENSMUST00000093785.6|Naa80|ENSMUSG00000079334.9|N(alpha)-acetyltransferase 80, NatH catalytic subunit
mm39_v1_chr5_+_21577640_21577711	0.978072	Pitx2_Otx2	ENSMUST00000035799.6|Fgl2|ENSMUSG00000039899.6|fibrinogen-like protein 2
mm39_v1_chr2_-_25086770_25086809	0.977103	Pitx2_Otx2	ENSMUST00000142857.2|Tor4a|ENSMUSG00000059555.7|torsin family 4, member A	ENSMUST00000137920.2|Tor4a|ENSMUSG00000059555.7|torsin family 4, member A
mm39_v1_chr6_+_83092476_83092556	0.976505	Pitx2_Otx2	ENSMUST00000032114.8|Mogs|ENSMUSG00000030036.9|mannosyl-oligosaccharide glucosidase
mm39_v1_chr7_+_97569156_97569174	0.974165	Pitx2_Otx2	ENSMUST00000041860.13|Gdpd4|ENSMUSG00000035582.14|glycerophosphodiester phosphodiesterase domain containing 4
mm39_v1_chr5_-_21260878_21260960	0.971805	Pitx2_Otx2	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr11_-_101117237_101117289	0.971656	Pitx2_Otx2	ENSMUST00000100417.3|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit	ENSMUST00000107285.8|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit	ENSMUST00000107284.8|Ezh1|ENSMUSG00000006920.15|enhancer of zeste 1 polycomb repressive complex 2 subunit
mm39_v1_chr2_-_167503416_167503502	0.971192	Pitx2_Otx2	ENSMUST00000125544.3|Gm20431|ENSMUSG00000089739.3|predicted gene 20431	ENSMUST00000006587.7|Tmem189|ENSMUSG00000090213.2|transmembrane protein 189
mm39_v1_chr14_+_15424803_15424803	0.968776	Pitx2_Otx2	ENSMUST00000169215.8|Gm3685|ENSMUSG00000094021.8|predicted gene 3685
mm39_v1_chr11_+_78816002_78816008	0.967457	Pitx2_Otx2	ENSMUST00000214397.3|Nos2|ENSMUSG00000020826.10|nitric oxide synthase 2, inducible
mm39_v1_chr4_-_59138983_59138983	0.964478	Pitx2_Otx2	ENSMUST00000107547.2|Shoc1|ENSMUSG00000038598.10|shortage in chiasmata 1
mm39_v1_chr14_+_53878403_53878403	0.962754	Pitx2_Otx2	ENSMUST00000184874.2|Trav14-2|ENSMUSG00000095711.6|T cell receptor alpha variable 14-2
mm39_v1_chr9_-_58156935_58156969	0.960938	Pitx2_Otx2	ENSMUST00000124063.2|Pml|ENSMUSG00000036986.17|promyelocytic leukemia	ENSMUST00000126690.8|Pml|ENSMUSG00000036986.17|promyelocytic leukemia
mm39_v1_chr18_-_36899245_36899291	0.958692	Pitx2_Otx2	ENSMUST00000061522.8|Dnd1|ENSMUSG00000044595.11|DND microRNA-mediated repression inhibitor 1
mm39_v1_chr9_-_102496047_102496102	0.957434	Pitx2_Otx2	ENSMUST00000215253.2|Cep63|ENSMUSG00000032534.19|centrosomal protein 63
mm39_v1_chr6_-_73198608_73198659	0.956769	Pitx2_Otx2	ENSMUST00000064948.13|Dnah6|ENSMUSG00000052861.14|dynein, axonemal, heavy chain 6	ENSMUST00000114040.8|Dnah6|ENSMUSG00000052861.14|dynein, axonemal, heavy chain 6
mm39_v1_chrY_-_7169293_7169293	0.95288	Pitx2_Otx2	ENSMUST00000189201.2|Gm21244|ENSMUSG00000094484.3|predicted gene, 21244
mm39_v1_chr16_+_38383154_38383181	0.952299	Pitx2_Otx2	ENSMUST00000171687.8|Tmem39a|ENSMUSG00000002845.15|transmembrane protein 39a	ENSMUST00000002924.15|Tmem39a|ENSMUSG00000002845.15|transmembrane protein 39a
mm39_v1_chr11_+_101221431_101221431	0.947314	Pitx2_Otx2	ENSMUST00000103105.10|Aoc3|ENSMUSG00000019326.15|amine oxidase, copper containing 3
mm39_v1_chr10_-_129710624_129710624	0.946872	Pitx2_Otx2	ENSMUST00000081367.2|Olfr814|ENSMUSG00000059134.3|olfactory receptor 814
mm39_v1_chr2_+_80469142_80469216	0.944058	Pitx2_Otx2	ENSMUST00000028382.13|Nup35|ENSMUSG00000026999.15|nucleoporin 35	ENSMUST00000124377.2|Nup35|ENSMUSG00000026999.15|nucleoporin 35
mm39_v1_chr13_-_119545479_119545504	0.94299	Pitx2_Otx2	ENSMUST00000223268.2|Nnt|ENSMUSG00000116207.2|nicotinamide nucleotide transhydrogenase
mm39_v1_chr14_+_53270305_53270305	0.942354	Pitx2_Otx2	ENSMUST00000179512.3|Trav13d-3|ENSMUSG00000095643.3|T cell receptor alpha variable 13D-3
mm39_v1_chr8_-_46577183_46577183	0.941429	Pitx2_Otx2	ENSMUST00000170416.8|Snx25|ENSMUSG00000038291.17|sorting nexin 25
mm39_v1_chr11_+_68906737_68906961	0.940176	Pitx2_Otx2	ENSMUST00000021278.14|Ctc1|ENSMUSG00000020898.19|CTS telomere maintenance complex component 1	ENSMUST00000161455.8|Ctc1|ENSMUSG00000020898.19|CTS telomere maintenance complex component 1	ENSMUST00000116359.3|Ctc1|ENSMUSG00000020898.19|CTS telomere maintenance complex component 1
mm39_v1_chr19_-_46917661_46917666	0.936059	Pitx2_Otx2	ENSMUST00000236727.2|Nt5c2|ENSMUSG00000025041.18|5'-nucleotidase, cytosolic II
mm39_v1_chr1_+_36753607_36753656	0.932376	Pitx2_Otx2	ENSMUST00000208994.2|4933424G06Rik|ENSMUSG00000102416.5|RIKEN cDNA 4933424G06 gene
mm39_v1_chr1_-_87029312_87029339	0.93098	Pitx2_Otx2	ENSMUST00000113270.3|Alpi|ENSMUSG00000079440.3|alkaline phosphatase, intestinal
mm39_v1_chr1_-_153719876_153719904	0.926785	Pitx2_Otx2	ENSMUST00000238926.2|Rgsl1|ENSMUSG00000042641.20|regulator of G-protein signaling like 1	ENSMUST00000124558.10|Rgsl1|ENSMUSG00000042641.20|regulator of G-protein signaling like 1
mm39_v1_chr5_-_93354348_93354359	0.925017	Pitx2_Otx2	ENSMUST00000058550.15|Ccni|ENSMUSG00000063015.13|cyclin I
mm39_v1_chr5_-_33011530_33011600	0.924602	Pitx2_Otx2	ENSMUST00000130134.3|Prr14l|ENSMUSG00000054280.15|proline rich 14-like	ENSMUST00000120129.9|Prr14l|ENSMUSG00000054280.15|proline rich 14-like
mm39_v1_chr18_+_84952778_84952907	0.923049	Pitx2_Otx2	ENSMUST00000224467.3|Fbxo15|ENSMUSG00000034391.13|F-box protein 15
mm39_v1_chrY_+_2862139_2862158	0.922344	Pitx2_Otx2	ENSMUST00000189964.7|Gm10256|ENSMUSG00000095852.8|predicted gene 10256	ENSMUST00000188114.2|Gm10256|ENSMUSG00000095852.8|predicted gene 10256
mm39_v1_chr8_-_106660470_106660494	0.92208	Pitx2_Otx2	ENSMUST00000034368.8|Ctrl|ENSMUSG00000031896.8|chymotrypsin-like
mm39_v1_chrY_-_7167777_7167777	0.921206	Pitx2_Otx2	ENSMUST00000178447.2|Gm21244|ENSMUSG00000094484.3|predicted gene, 21244
mm39_v1_chr5_-_100946334_100946415	0.920991	Pitx2_Otx2	ENSMUST00000133845.8|Helq|ENSMUSG00000035266.17|helicase, POLQ-like
mm39_v1_chr6_-_83752749_83752808	0.920987	Pitx2_Otx2	ENSMUST00000014892.8|Tex261|ENSMUSG00000014748.14|testis expressed gene 261
mm39_v1_chr16_-_17732923_17732923	0.920618	Pitx2_Otx2	ENSMUST00000012279.6|Gsc2|ENSMUSG00000022738.8|goosecoid homebox 2	ENSMUST00000232493.2|Gsc2|ENSMUSG00000022738.8|goosecoid homebox 2
mm39_v1_chrX_+_158315652_158315665	0.919054	Pitx2_Otx2	ENSMUST00000112464.8|Bclaf3|ENSMUSG00000044150.13|Bclaf1 and Thrap3 family member 3
mm39_v1_chr15_-_78739717_78739736	0.917389	Pitx2_Otx2	ENSMUST00000044584.6|Lgals2|ENSMUSG00000043501.6|lectin, galactose-binding, soluble 2
mm39_v1_chr5_+_90907207_90907237	0.916852	Pitx2_Otx2	ENSMUST00000031318.6|Cxcl5|ENSMUSG00000029371.8|chemokine (C-X-C motif) ligand 5
mm39_v1_chr9_+_59446823_59446937	0.914808	Pitx2_Otx2	ENSMUST00000026262.8|Hexa|ENSMUSG00000025232.9|hexosaminidase A
mm39_v1_chr12_-_28685913_28685952	0.913249	Pitx2_Otx2	ENSMUST00000074267.5|Rps7|ENSMUSG00000061477.5|ribosomal protein S7
mm39_v1_chr11_-_98084086_98084132	0.912885	Pitx2_Otx2	ENSMUST00000092735.12|Med1|ENSMUSG00000018160.16|mediator complex subunit 1	ENSMUST00000107545.9|Med1|ENSMUSG00000018160.16|mediator complex subunit 1
mm39_v1_chr11_+_70057449_70057557	0.912751	Pitx2_Otx2	ENSMUST00000102571.10|Clec10a|ENSMUSG00000000318.17|C-type lectin domain family 10, member A	ENSMUST00000178945.8|Clec10a|ENSMUSG00000000318.17|C-type lectin domain family 10, member A	ENSMUST00000000327.13|Clec10a|ENSMUSG00000000318.17|C-type lectin domain family 10, member A	ENSMUST00000178567.3|Clec10a|ENSMUSG00000000318.17|C-type lectin domain family 10, member A
mm39_v1_chrY_-_3410148_3410167	0.911253	Pitx2_Otx2	ENSMUST00000190283.7|Gm21708|ENSMUSG00000095948.8|predicted gene, 21708	ENSMUST00000169382.3|Gm21704|ENSMUSG00000093987.8|predicted gene, 21704	ENSMUST00000188091.7|Gm21708|ENSMUSG00000095948.8|predicted gene, 21708
mm39_v1_chr18_+_84953140_84953283	0.911228	Pitx2_Otx2	ENSMUST00000037718.10|Fbxo15|ENSMUSG00000034391.13|F-box protein 15
mm39_v1_chr13_+_38223023_38223023	0.910965	Pitx2_Otx2	ENSMUST00000226110.2|Riok1|ENSMUSG00000021428.10|RIO kinase 1
mm39_v1_chr14_+_53497357_53497357	0.909746	Pitx2_Otx2	ENSMUST00000103623.3|Trav14n-2|ENSMUSG00000093801.3|T cell receptor alpha variable 14N-2
mm39_v1_chr5_-_122752508_122752607	0.908697	Pitx2_Otx2	ENSMUST00000127220.8|Ift81|ENSMUSG00000029469.15|intraflagellar transport 81	ENSMUST00000031426.14|Ift81|ENSMUSG00000029469.15|intraflagellar transport 81
mm39_v1_chr15_+_36179676_36179849	0.907605	Pitx2_Otx2	ENSMUST00000171205.3|Spag1|ENSMUSG00000037617.13|sperm associated antigen 1
mm39_v1_chr14_+_55051598_55051613	0.905767	Pitx2_Otx2	ENSMUST00000218311.2|Rnf212b|ENSMUSG00000112858.3|ring finger protein 212B
mm39_v1_chr10_+_79650496_79650519	0.905522	Pitx2_Otx2	ENSMUST00000218857.2|Palm|ENSMUSG00000035863.15|paralemmin	ENSMUST00000220365.2|Palm|ENSMUSG00000035863.15|paralemmin
mm39_v1_chr11_+_61847622_61847657	0.903927	Pitx2_Otx2	ENSMUST00000202389.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1
mm39_v1_chr14_+_25842565_25842594	0.901564	Pitx2_Otx2	ENSMUST00000022416.15|Anxa11|ENSMUSG00000021866.16|annexin A11
mm39_v1_chr9_+_69305211_69305219	0.900442	Pitx2_Otx2	ENSMUST00000117610.8|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2	ENSMUST00000145538.2|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2	ENSMUST00000117246.8|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2
mm39_v1_chr5_+_139239247_139239272	0.898644	Pitx2_Otx2	ENSMUST00000138508.8|Get4|ENSMUSG00000025858.13|golgi to ER traffic protein 4	ENSMUST00000110878.2|Get4|ENSMUSG00000025858.13|golgi to ER traffic protein 4
mm39_v1_chr14_+_53220658_53220658	0.898577	Pitx2_Otx2	ENSMUST00000200548.2|Trav9d-4|ENSMUSG00000090868.3|T cell receptor alpha variable 9D-4
mm39_v1_chrX_+_88795874_88795874	0.897628	Pitx2_Otx2	ENSMUST00000113958.2|4932429P05Rik|ENSMUSG00000079513.2|RIKEN cDNA 4932429P05 gene
mm39_v1_chr5_-_137475326_137475364	0.896751	Pitx2_Otx2	ENSMUST00000117564.8|Zan|ENSMUSG00000079173.12|zonadhesin
mm39_v1_chr11_-_48717482_48717574	0.893898	Pitx2_Otx2	ENSMUST00000104959.2|Gm12184|ENSMUSG00000078154.4|predicted gene 12184
mm39_v1_chr11_+_95925711_95925791	0.893359	Pitx2_Otx2	ENSMUST00000006217.10|Snf8|ENSMUSG00000006058.11|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)	ENSMUST00000107700.4|Snf8|ENSMUSG00000006058.11|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm39_v1_chr7_-_30560989_30560989	0.890567	Pitx2_Otx2	ENSMUST00000052700.6|Ffar1|ENSMUSG00000044453.6|free fatty acid receptor 1
mm39_v1_chr12_-_79239022_79239067	0.886954	Pitx2_Otx2	ENSMUST00000161204.8|Rdh11|ENSMUSG00000066441.15|retinol dehydrogenase 11
mm39_v1_chr5_+_136008950_136008966	0.885975	Pitx2_Otx2	ENSMUST00000005073.13|Zp3|ENSMUSG00000004948.13|zona pellucida glycoprotein 3
mm39_v1_chr16_+_90628001_90628038	0.883557	Pitx2_Otx2	ENSMUST00000099543.10|Eva1c|ENSMUSG00000039903.19|eva-1 homolog C (C. elegans)
mm39_v1_chr16_+_14179421_14179475	0.882434	Pitx2_Otx2	ENSMUST00000100167.10|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	ENSMUST00000154748.8|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	ENSMUST00000134776.8|Abcc1|ENSMUSG00000023088.18|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm39_v1_chr17_+_35191661_35191705	0.882079	Pitx2_Otx2	ENSMUST00000007248.5|Hspa1l|ENSMUSG00000007033.5|heat shock protein 1-like
mm39_v1_chr2_-_66086919_66086990	0.881775	Pitx2_Otx2	ENSMUST00000125446.3|Ttc21b|ENSMUSG00000034848.18|tetratricopeptide repeat domain 21B	ENSMUST00000102718.10|Ttc21b|ENSMUSG00000034848.18|tetratricopeptide repeat domain 21B
mm39_v1_chr2_-_94268426_94268506	0.881623	Pitx2_Otx2	ENSMUST00000028617.7|Api5|ENSMUSG00000027193.13|apoptosis inhibitor 5
mm39_v1_chrX_+_105186789_105186908	0.879648	Pitx2_Otx2	ENSMUST00000040065.4|Tlr13|ENSMUSG00000033777.5|toll-like receptor 13
mm39_v1_chr5_-_137609634_137609690	0.878606	Pitx2_Otx2	ENSMUST00000054564.13|Pcolce|ENSMUSG00000029718.15|procollagen C-endopeptidase enhancer protein
mm39_v1_chr8_-_84771610_84771629	0.876121	Pitx2_Otx2	ENSMUST00000061923.5|Rln3|ENSMUSG00000045232.5|relaxin 3
mm39_v1_chr19_+_6276408_6276418	0.875036	Pitx2_Otx2	ENSMUST00000025698.14|Gpha2|ENSMUSG00000024784.14|glycoprotein hormone alpha 2	ENSMUST00000113526.2|Gpha2|ENSMUSG00000024784.14|glycoprotein hormone alpha 2
mm39_v1_chr4_+_148123554_148123648	0.874079	Pitx2_Otx2	ENSMUST00000141283.8|Mthfr|ENSMUSG00000029009.18|methylenetetrahydrofolate reductase
mm39_v1_chr15_-_103473481_103473515	0.868451	Pitx2_Otx2	ENSMUST00000228060.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000228895.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000023134.5|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1
mm39_v1_chr9_+_50528813_50528861	0.868262	Pitx2_Otx2	ENSMUST00000141366.8|Pih1d2|ENSMUSG00000000167.15|PIH1 domain containing 2
mm39_v1_chr1_+_58834621_58834717	0.865371	Pitx2_Otx2	ENSMUST00000191201.7|Casp8|ENSMUSG00000026029.15|caspase 8
mm39_v1_chrX_-_162544319_162544339	0.861973	Pitx2_Otx2	ENSMUST00000059320.4|Rnf138rt1|ENSMUSG00000083695.7|ring finger protein 138, retrogene 1
mm39_v1_chr16_+_36030773_36030773	0.860591	Pitx2_Otx2	ENSMUST00000089628.4|Csta3|ENSMUSG00000094733.2|cystatin A family member 3
mm39_v1_chrY_+_13163582_13163582	0.857709	Pitx2_Otx2	ENSMUST00000180318.2|Gm21425|ENSMUSG00000096820.3|predicted gene, 21425
mm39_v1_chr14_+_61844899_61844931	0.854798	Pitx2_Otx2	ENSMUST00000225582.2|Kcnrg|ENSMUSG00000046168.10|potassium channel regulator	ENSMUST00000051184.10|Kcnrg|ENSMUSG00000046168.10|potassium channel regulator
mm39_v1_chr6_+_125048230_125048252	0.852639	Pitx2_Otx2	ENSMUST00000140346.9|Lpar5|ENSMUSG00000067714.14|lysophosphatidic acid receptor 5	ENSMUST00000171989.3|Lpar5|ENSMUSG00000067714.14|lysophosphatidic acid receptor 5
mm39_v1_chrY_+_18090734_18090734	0.852529	Pitx2_Otx2	ENSMUST00000180056.2|Ssty1|ENSMUSG00000095267.3|spermiogenesis specific transcript on the Y 1
mm39_v1_chr14_+_61835675_61835702	0.851263	Pitx2_Otx2	ENSMUST00000165015.9|Trim13|ENSMUSG00000035235.14|tripartite motif-containing 13
mm39_v1_chr17_+_80531870_80531922	0.850178	Pitx2_Otx2	ENSMUST00000069486.13|Gemin6|ENSMUSG00000055760.13|gem nuclear organelle associated protein 6
mm39_v1_chr1_-_160986880_160986889	0.849911	Pitx2_Otx2	ENSMUST00000135643.8|Tex50|ENSMUSG00000049160.16|testis expressed 50	ENSMUST00000178511.3|Tex50|ENSMUSG00000049160.16|testis expressed 50
mm39_v1_chr5_-_139761387_139761436	0.84796	Pitx2_Otx2	ENSMUST00000200393.5|Ints1|ENSMUSG00000029547.11|integrator complex subunit 1	ENSMUST00000072607.9|Ints1|ENSMUSG00000029547.11|integrator complex subunit 1	ENSMUST00000196864.2|Ints1|ENSMUSG00000029547.11|integrator complex subunit 1
mm39_v1_chr15_-_84804239_84804239	0.847866	Pitx2_Otx2	ENSMUST00000189185.2|Gm29666|ENSMUSG00000100967.2|predicted gene 29666
mm39_v1_chr2_+_121340296_121340350	0.846007	Pitx2_Otx2	ENSMUST00000110603.2|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr4_+_151014133_151014165	0.844809	Pitx2_Otx2	ENSMUST00000060901.11|Tnfrsf9|ENSMUSG00000028965.14|tumor necrosis factor receptor superfamily, member 9
mm39_v1_chr16_-_4536992_4537028	0.844594	Pitx2_Otx2	ENSMUST00000115851.10|Nmral1|ENSMUSG00000063445.15|NmrA-like family domain containing 1
mm39_v1_chr5_-_30401416_30401416	0.841287	Pitx2_Otx2	ENSMUST00000125367.4|Adgrf3|ENSMUSG00000067642.12|adhesion G protein-coupled receptor F3
mm39_v1_chr11_-_78074377_78074410	0.839835	Pitx2_Otx2	ENSMUST00000102483.5|Rpl23a|ENSMUSG00000058546.9|ribosomal protein L23A
mm39_v1_chrY_-_9202190_9202190	0.839618	Pitx2_Otx2	ENSMUST00000189253.2|Gm21721|ENSMUSG00000094679.3|predicted gene, 21721
mm39_v1_chrX_+_99472511_99472619	0.837877	Pitx2_Otx2	ENSMUST00000060241.3|Otud6a|ENSMUSG00000051582.3|OTU domain containing 6A
mm39_v1_chr2_+_103900164_103900236	0.837777	Pitx2_Otx2	ENSMUST00000111131.9|Cd59b|ENSMUSG00000068686.13|CD59b antigen	ENSMUST00000111132.8|Cd59b|ENSMUSG00000068686.13|CD59b antigen	ENSMUST00000129749.8|Cd59b|ENSMUSG00000068686.13|CD59b antigen
mm39_v1_chr19_-_10995390_10995404	0.837759	Pitx2_Otx2	ENSMUST00000177684.3|Ms4a18|ENSMUSG00000094584.3|membrane-spanning 4-domains, subfamily A, member 18
mm39_v1_chr13_-_64514830_64514909	0.834967	Pitx2_Otx2	ENSMUST00000222971.2|Ctsl|ENSMUSG00000021477.10|cathepsin L
mm39_v1_chrY_-_10534428_10534428	0.833844	Pitx2_Otx2	ENSMUST00000179665.2|Gm20737|ENSMUSG00000095950.3|predicted gene, 20737
mm39_v1_chr7_+_44804068_44804158	0.833311	Pitx2_Otx2	ENSMUST00000209954.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1
mm39_v1_chr6_+_113023186_113023330	0.830739	Pitx2_Otx2	ENSMUST00000032398.15|Thumpd3|ENSMUSG00000030264.15|THUMP domain containing 3	ENSMUST00000155378.2|Thumpd3|ENSMUSG00000030264.15|THUMP domain containing 3
mm39_v1_chr13_-_67209195_67209242	0.828426	Pitx2_Otx2	ENSMUST00000167565.3|Zfp712|ENSMUSG00000090641.3|zinc finger protein 712
mm39_v1_chr10_-_81102740_81102770	0.828188	Pitx2_Otx2	ENSMUST00000046114.5|Mrpl54|ENSMUSG00000034932.5|mitochondrial ribosomal protein L54
mm39_v1_chr1_-_130380153_130380267	0.826768	Pitx2_Otx2	ENSMUST00000140400.2|Cd55|ENSMUSG00000026399.13|CD55 molecule, decay accelerating factor for complement
mm39_v1_chr5_-_137609691_137609749	0.82669	Pitx2_Otx2	ENSMUST00000031731.14|Pcolce|ENSMUSG00000029718.15|procollagen C-endopeptidase enhancer protein
mm39_v1_chr1_-_75200298_75200298	0.825879	Pitx2_Otx2	ENSMUST00000179573.2|A630095N17Rik|ENSMUSG00000096094.3|RIKEN cDNA A630095N17 gene
mm39_v1_chr2_-_155849839_155849897	0.825128	Pitx2_Otx2	ENSMUST00000086145.10|6430550D23Rik|ENSMUSG00000074646.11|RIKEN cDNA 6430550D23 gene	ENSMUST00000144686.8|6430550D23Rik|ENSMUSG00000074646.11|RIKEN cDNA 6430550D23 gene	ENSMUST00000140657.8|6430550D23Rik|ENSMUSG00000074646.11|RIKEN cDNA 6430550D23 gene
mm39_v1_chr11_-_116021936_116021957	0.821867	Pitx2_Otx2	ENSMUST00000106440.9|Trim65|ENSMUSG00000054517.10|tripartite motif-containing 65	ENSMUST00000067632.4|Trim65|ENSMUSG00000054517.10|tripartite motif-containing 65
mm39_v1_chr14_+_73747454_73747496	0.818953	Pitx2_Otx2	ENSMUST00000022705.7|Med4|ENSMUSG00000022109.7|mediator complex subunit 4
mm39_v1_chr4_+_47386216_47386274	0.815545	Pitx2_Otx2	ENSMUST00000107725.3|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr5_-_123270702_123270755	0.815543	Pitx2_Otx2	ENSMUST00000031401.6|Rhof|ENSMUSG00000029449.12|ras homolog family member F (in filopodia)
mm39_v1_chr7_+_101520843_101520854	0.81388	Pitx2_Otx2	ENSMUST00000210984.2|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr1_+_60948307_60948330	0.81314	Pitx2_Otx2	ENSMUST00000097720.4|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr15_-_79816717_79816748	0.808252	Pitx2_Otx2	ENSMUST00000177044.2|Cbx7|ENSMUSG00000053411.17|chromobox 7	ENSMUST00000109615.8|Cbx7|ENSMUSG00000053411.17|chromobox 7
mm39_v1_chr6_-_24515036_24515083	0.808195	Pitx2_Otx2	ENSMUST00000052277.5|Iqub|ENSMUSG00000046192.5|IQ motif and ubiquitin domain containing
mm39_v1_chr11_+_58758030_58758101	0.807034	Pitx2_Otx2	ENSMUST00000073924.10|2810021J22Rik|ENSMUSG00000020491.16|RIKEN cDNA 2810021J22 gene	ENSMUST00000132570.2|2810021J22Rik|ENSMUSG00000020491.16|RIKEN cDNA 2810021J22 gene
mm39_v1_chr14_+_52516589_52516645	0.806385	Pitx2_Otx2	ENSMUST00000022766.8|Tox4|ENSMUSG00000016831.13|TOX high mobility group box family member 4
mm39_v1_chrX_-_72380446_72380446	0.798606	Pitx2_Otx2	ENSMUST00000207943.2|Gm45015|ENSMUSG00000109368.2|predicted gene 45015
mm39_v1_chr16_+_59292138_59292225	0.797315	Pitx2_Otx2	ENSMUST00000023407.12|Riox2|ENSMUSG00000022724.16|ribosomal oxygenase 2	ENSMUST00000120667.2|Riox2|ENSMUSG00000022724.16|ribosomal oxygenase 2	ENSMUST00000120674.8|Riox2|ENSMUSG00000022724.16|ribosomal oxygenase 2
mm39_v1_chr7_-_7139723_7139754	0.78941	Pitx2_Otx2	ENSMUST00000211240.2|Zfp773|ENSMUSG00000063535.8|zinc finger protein 773	ENSMUST00000032622.9|Zfp773|ENSMUSG00000063535.8|zinc finger protein 773
mm39_v1_chr4_-_43710231_43710255	0.788978	Pitx2_Otx2	ENSMUST00000217544.2|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71	ENSMUST00000107862.3|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71
mm39_v1_chr2_-_18806629_18806629	0.784426	Pitx2_Otx2	ENSMUST00000181515.2|Carlr|ENSMUSG00000097638.2|cardiac and apoptosis-related long non-coding RNA
mm39_v1_chr7_+_19197192_19197256	0.783687	Pitx2_Otx2	ENSMUST00000137613.9|Exoc3l2|ENSMUSG00000011263.17|exocyst complex component 3-like 2
mm39_v1_chr17_-_21110913_21110913	0.782948	Pitx2_Otx2	ENSMUST00000061278.2|Vmn1r231|ENSMUSG00000050933.5|vomeronasal 1 receptor 231
mm39_v1_chr19_-_5962862_5962899	0.781379	Pitx2_Otx2	ENSMUST00000136983.8|Dpf2|ENSMUSG00000024826.16|D4, zinc and double PHD fingers family 2
mm39_v1_chr7_-_33929708_33929761	0.777713	Pitx2_Otx2	ENSMUST00000038027.6|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chrY_-_10750826_10750826	0.777417	Pitx2_Otx2	ENSMUST00000177818.2|Gm20777|ENSMUSG00000094813.3|predicted gene, 20777
mm39_v1_chr7_-_19307268_19307286	0.77404	Pitx2_Otx2	ENSMUST00000051364.4|Gemin7|ENSMUSG00000044709.7|gem nuclear organelle associated protein 7
mm39_v1_chr5_+_4242367_4242367	0.772758	Pitx2_Otx2	ENSMUST00000177258.2|Mterf1b|ENSMUSG00000053178.6|mitochondrial transcription termination factor 1b
mm39_v1_chr8_+_13455080_13455098	0.772747	Pitx2_Otx2	ENSMUST00000033827.8|Grk1|ENSMUSG00000031450.9|G protein-coupled receptor kinase 1	ENSMUST00000209909.2|Grk1|ENSMUSG00000031450.9|G protein-coupled receptor kinase 1
mm39_v1_chr10_-_85847697_85847761	0.770429	Pitx2_Otx2	ENSMUST00000105304.2|Bpifc|ENSMUSG00000050108.13|BPI fold containing family C	ENSMUST00000061699.12|Bpifc|ENSMUSG00000050108.13|BPI fold containing family C
mm39_v1_chr11_+_4168221_4168249	0.768479	Pitx2_Otx2	ENSMUST00000020699.4|Castor1|ENSMUSG00000020424.4|cytosolic arginine sensor for mTORC1 subunit 1
mm39_v1_chr6_-_149090146_149090224	0.7669	Pitx2_Otx2	ENSMUST00000095319.10|Amn1|ENSMUSG00000068250.14|antagonist of mitotic exit network 1	ENSMUST00000141346.2|Amn1|ENSMUSG00000068250.14|antagonist of mitotic exit network 1	ENSMUST00000111535.8|Amn1|ENSMUSG00000068250.14|antagonist of mitotic exit network 1
mm39_v1_chr17_-_34043320_34043466	0.765776	Pitx2_Otx2	ENSMUST00000173879.8|Rps28|ENSMUSG00000067288.14|ribosomal protein S28	ENSMUST00000166693.3|Rps28|ENSMUSG00000067288.14|ribosomal protein S28	ENSMUST00000173019.8|Rps28|ENSMUSG00000067288.14|ribosomal protein S28
mm39_v1_chr9_+_20940669_20940751	0.765466	Pitx2_Otx2	ENSMUST00000001040.7|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group	ENSMUST00000215077.2|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group
mm39_v1_chr9_-_40915895_40915929	0.763115	Pitx2_Otx2	ENSMUST00000180384.3|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule
mm39_v1_chrX_-_136022832_136022920	0.762446	Pitx2_Otx2	ENSMUST00000155283.2|Esx1|ENSMUSG00000023443.14|extraembryonic, spermatogenesis, homeobox 1
mm39_v1_chr7_-_43906629_43906629	0.762004	Pitx2_Otx2	ENSMUST00000012921.9|Acp4|ENSMUSG00000012777.15|acid phosphatase 4
mm39_v1_chr9_-_96360676_96360728	0.757989	Pitx2_Otx2	ENSMUST00000057500.6|Rnf7|ENSMUSG00000051234.7|ring finger protein 7
mm39_v1_chr5_-_124563969_124564011	0.757855	Pitx2_Otx2	ENSMUST00000065263.12|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chr4_-_34778270_34778423	0.75645	Pitx2_Otx2	ENSMUST00000108132.8|Smim8|ENSMUSG00000028295.15|small integral membrane protein 8	ENSMUST00000108133.10|Smim8|ENSMUSG00000028295.15|small integral membrane protein 8	ENSMUST00000108131.8|Smim8|ENSMUSG00000028295.15|small integral membrane protein 8	ENSMUST00000108134.8|Smim8|ENSMUSG00000028295.15|small integral membrane protein 8	ENSMUST00000029972.4|Smim8|ENSMUSG00000028295.15|small integral membrane protein 8
mm39_v1_chr16_-_4536943_4536990	0.752265	Pitx2_Otx2	ENSMUST00000120056.8|Nmral1|ENSMUSG00000063445.15|NmrA-like family domain containing 1	ENSMUST00000074970.8|Nmral1|ENSMUSG00000063445.15|NmrA-like family domain containing 1
mm39_v1_chr11_-_121120052_121120148	0.748836	Pitx2_Otx2	ENSMUST00000169393.8|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000106115.8|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000038709.14|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000147490.6|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1
mm39_v1_chr4_-_138641225_138641296	0.746313	Pitx2_Otx2	ENSMUST00000097830.4|Otud3|ENSMUSG00000041161.9|OTU domain containing 3
mm39_v1_chr11_+_3913970_3913984	0.745715	Pitx2_Otx2	ENSMUST00000109985.8|Pes1|ENSMUSG00000020430.13|pescadillo ribosomal biogenesis factor 1	ENSMUST00000020705.5|Pes1|ENSMUSG00000020430.13|pescadillo ribosomal biogenesis factor 1
mm39_v1_chr9_-_109930078_109930155	0.744333	Pitx2_Otx2	ENSMUST00000196455.2|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000062368.13|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm39_v1_chr15_+_102387053_102387105	0.739689	Pitx2_Otx2	ENSMUST00000230682.2|Pcbp2|ENSMUSG00000056851.15|poly(rC) binding protein 2	ENSMUST00000231085.2|Pcbp2|ENSMUSG00000056851.15|poly(rC) binding protein 2
mm39_v1_chr12_-_52074846_52074846	0.738073	Pitx2_Otx2	ENSMUST00000040161.5|Gpr33|ENSMUSG00000035148.5|G protein-coupled receptor 33
mm39_v1_chrY_+_40761876_40761876	0.737309	Pitx2_Otx2	ENSMUST00000178528.2|Gm20795|ENSMUSG00000095452.3|predicted gene, 20795
mm39_v1_chrY_-_10145559_10145559	0.736652	Pitx2_Otx2	ENSMUST00000180130.2|Gm21310|ENSMUSG00000095032.3|predicted gene, 21310
mm39_v1_chr2_+_127050281_127050343	0.736489	Pitx2_Otx2	ENSMUST00000103220.4|Snrnp200|ENSMUSG00000003660.11|small nuclear ribonucleoprotein 200 (U5)
mm39_v1_chr6_-_41012435_41012448	0.736173	Pitx2_Otx2	ENSMUST00000031931.6|2210010C04Rik|ENSMUSG00000029882.6|RIKEN cDNA 2210010C04 gene
mm39_v1_chr14_+_16490636_16490636	0.731861	Pitx2_Otx2	ENSMUST00000170686.8|Gm3453|ENSMUSG00000090643.9|predicted gene 3453
mm39_v1_chr10_+_23952398_23952398	0.73151	Pitx2_Otx2	ENSMUST00000051133.6|Taar8a|ENSMUSG00000096442.2|trace amine-associated receptor 8A
mm39_v1_chr6_-_34965339_34965387	0.731241	Pitx2_Otx2	ENSMUST00000201355.4|Slc23a4|ENSMUSG00000029847.14|solute carrier family 23 member 4
mm39_v1_chr19_+_6111204_6111287	0.730878	Pitx2_Otx2	ENSMUST00000162726.5|Znhit2|ENSMUSG00000075227.7|zinc finger, HIT domain containing 2
mm39_v1_chr10_-_81436671_81436734	0.724385	Pitx2_Otx2	ENSMUST00000151858.8|Tle6|ENSMUSG00000034758.13|transducin-like enhancer of split 6	ENSMUST00000142948.8|Tle6|ENSMUSG00000034758.13|transducin-like enhancer of split 6	ENSMUST00000072020.9|Tle6|ENSMUSG00000034758.13|transducin-like enhancer of split 6
mm39_v1_chr13_-_119545520_119545540	0.72314	Pitx2_Otx2	ENSMUST00000069902.13|Nnt|ENSMUSG00000025453.19|nicotinamide nucleotide transhydrogenase	ENSMUST00000099149.10|Nnt|ENSMUSG00000025453.19|nicotinamide nucleotide transhydrogenase	ENSMUST00000109204.8|Nnt|ENSMUSG00000025453.19|nicotinamide nucleotide transhydrogenase
mm39_v1_chr8_-_3767547_3767560	0.721851	Pitx2_Otx2	ENSMUST00000058040.7|Clec4g|ENSMUSG00000074491.10|C-type lectin domain family 4, member g
mm39_v1_chr18_+_9957906_9957987	0.719726	Pitx2_Otx2	ENSMUST00000025137.9|Thoc1|ENSMUSG00000024287.9|THO complex 1
mm39_v1_chr17_+_48539782_48539805	0.719674	Pitx2_Otx2	ENSMUST00000113251.10|Trem1|ENSMUSG00000042265.14|triggering receptor expressed on myeloid cells 1	ENSMUST00000048782.7|Trem1|ENSMUSG00000042265.14|triggering receptor expressed on myeloid cells 1
mm39_v1_chr11_-_99176086_99176090	0.718654	Pitx2_Otx2	ENSMUST00000017255.4|Krt24|ENSMUSG00000020913.4|keratin 24
mm39_v1_chr7_+_127511681_127511701	0.717027	Pitx2_Otx2	ENSMUST00000033070.9|Kat8|ENSMUSG00000030801.11|K(lysine) acetyltransferase 8
mm39_v1_chr6_-_78355834_78355848	0.712919	Pitx2_Otx2	ENSMUST00000089667.8|Reg3d|ENSMUSG00000068341.9|regenerating islet-derived 3 delta	ENSMUST00000167492.4|Reg3d|ENSMUSG00000068341.9|regenerating islet-derived 3 delta
mm39_v1_chr11_+_98517170_98517186	0.709313	Pitx2_Otx2	ENSMUST00000073295.3|Gsdma3|ENSMUSG00000064224.11|gasdermin A3	ENSMUST00000107508.9|Gsdma3|ENSMUSG00000064224.11|gasdermin A3
mm39_v1_chr1_-_131204422_131204456	0.706709	Pitx2_Otx2	ENSMUST00000159195.2|Ikbke|ENSMUSG00000042349.14|inhibitor of kappaB kinase epsilon
mm39_v1_chr16_+_38182569_38182607	0.702715	Pitx2_Otx2	ENSMUST00000023494.13|Popdc2|ENSMUSG00000022803.13|popeye domain containing 2	ENSMUST00000114739.2|Popdc2|ENSMUSG00000022803.13|popeye domain containing 2
mm39_v1_chr11_+_82782938_82782954	0.701047	Pitx2_Otx2	ENSMUST00000018988.6|Fndc8|ENSMUSG00000018844.7|fibronectin type III domain containing 8
mm39_v1_chr8_+_123920233_123920318	0.701038	Pitx2_Otx2	ENSMUST00000212773.2|Dpep1|ENSMUSG00000019278.6|dipeptidase 1
mm39_v1_chr1_+_74164700_74164738	0.699348	Pitx2_Otx2	ENSMUST00000080167.11|Rufy4|ENSMUSG00000061815.12|RUN and FYVE domain containing 4	ENSMUST00000127134.2|Rufy4|ENSMUSG00000061815.12|RUN and FYVE domain containing 4
mm39_v1_chr7_-_44778050_44778185	0.6993	Pitx2_Otx2	ENSMUST00000209711.2|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A	ENSMUST00000211037.2|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A	ENSMUST00000209927.2|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A	ENSMUST00000209815.2|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A	ENSMUST00000210918.2|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A	ENSMUST00000150350.9|Rpl13a|ENSMUSG00000074129.15|ribosomal protein L13A
mm39_v1_chr8_-_22656428_22656455	0.698258	Pitx2_Otx2	ENSMUST00000033865.16|Nek3|ENSMUSG00000031478.17|NIMA (never in mitosis gene a)-related expressed kinase 3	ENSMUST00000110730.10|Nek3|ENSMUSG00000031478.17|NIMA (never in mitosis gene a)-related expressed kinase 3
mm39_v1_chr14_-_54655237_54655267	0.697517	Pitx2_Otx2	ENSMUST00000195999.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr11_-_101193106_101193117	0.69738	Pitx2_Otx2	ENSMUST00000130916.8|Becn1|ENSMUSG00000035086.14|beclin 1, autophagy related
mm39_v1_chr1_+_165957909_165957993	0.69731	Pitx2_Otx2	ENSMUST00000166159.2|Gpa33|ENSMUSG00000000544.15|glycoprotein A33 (transmembrane)
mm39_v1_chr8_+_96551974_96551982	0.696489	Pitx2_Otx2	ENSMUST00000074053.6|Sap18b|ENSMUSG00000061104.6|Sin3-associated polypeptide 18B
mm39_v1_chr4_+_74160705_74160734	0.695898	Pitx2_Otx2	ENSMUST00000077851.10|Kdm4c|ENSMUSG00000028397.14|lysine (K)-specific demethylase 4C
mm39_v1_chr11_+_4852212_4852246	0.694966	Pitx2_Otx2	ENSMUST00000142543.3|Thoc5|ENSMUSG00000034274.12|THO complex 5
mm39_v1_chr9_-_56151334_56151382	0.694546	Pitx2_Otx2	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr15_+_101191077_101191093	0.693144	Pitx2_Otx2	ENSMUST00000071328.7|Smim41|ENSMUSG00000075408.6|small integral membrane protein 41
mm39_v1_chr2_+_30023758_30023818	0.692236	Pitx2_Otx2	ENSMUST00000044556.12|Tbc1d13|ENSMUSG00000039678.13|TBC1 domain family, member 13
mm39_v1_chr19_+_6097111_6097134	0.690197	Pitx2_Otx2	ENSMUST00000025723.9|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr4_-_132191181_132191240	0.689854	Pitx2_Otx2	ENSMUST00000102567.4|Med18|ENSMUSG00000066042.5|mediator complex subunit 18
mm39_v1_chr7_+_45204317_45204348	0.688157	Pitx2_Otx2	ENSMUST00000107752.12|Hsd17b14|ENSMUSG00000030825.20|hydroxysteroid (17-beta) dehydrogenase 14
mm39_v1_chr8_-_25581354_25581374	0.687419	Pitx2_Otx2	ENSMUST00000125466.2|Plekha2|ENSMUSG00000031557.17|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm39_v1_chr17_-_36280616_36280678	0.687324	Pitx2_Otx2	ENSMUST00000043757.15|Abcf1|ENSMUSG00000038762.16|ATP-binding cassette, sub-family F (GCN20), member 1
mm39_v1_chr9_+_108820846_108821046	0.685711	Pitx2_Otx2	ENSMUST00000198140.5|Pfkfb4|ENSMUSG00000025648.19|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	ENSMUST00000051873.15|Pfkfb4|ENSMUSG00000025648.19|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm39_v1_chr5_-_100126707_100126718	0.685624	Pitx2_Otx2	ENSMUST00000170912.2|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr9_-_14663689_14663689	0.684265	Pitx2_Otx2	ENSMUST00000061498.7|Fut4|ENSMUSG00000049307.7|fucosyltransferase 4
mm39_v1_chr10_+_13376745_13376787	0.682479	Pitx2_Otx2	ENSMUST00000060212.13|Fuca2|ENSMUSG00000019810.16|fucosidase, alpha-L- 2, plasma	ENSMUST00000121465.3|Fuca2|ENSMUSG00000019810.16|fucosidase, alpha-L- 2, plasma
mm39_v1_chr9_-_96360648_96360675	0.682148	Pitx2_Otx2	ENSMUST00000071301.5|Rnf7|ENSMUSG00000051234.7|ring finger protein 7
mm39_v1_chr7_+_19222972_19222992	0.680323	Pitx2_Otx2	ENSMUST00000011407.8|Exoc3l2|ENSMUSG00000011263.17|exocyst complex component 3-like 2
mm39_v1_chrY_+_5656986_5656986	0.678686	Pitx2_Otx2	ENSMUST00000190391.2|Gm21854|ENSMUSG00000096706.3|predicted gene, 21854
mm39_v1_chr7_-_104018989_104019044	0.678627	Pitx2_Otx2	ENSMUST00000164410.2|Trim30b|ENSMUSG00000052749.10|tripartite motif-containing 30B
mm39_v1_chr4_+_151014167_151014254	0.678109	Pitx2_Otx2	ENSMUST00000126707.3|Tnfrsf9|ENSMUSG00000028965.14|tumor necrosis factor receptor superfamily, member 9
mm39_v1_chr3_-_85909798_85909843	0.67537	Pitx2_Otx2	ENSMUST00000061343.4|Prss48|ENSMUSG00000049013.4|protease, serine 48
mm39_v1_chr4_+_3940747_3940854	0.675131	Pitx2_Otx2	ENSMUST00000119403.2|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7
mm39_v1_chr4_+_150171822_150171999	0.675054	Pitx2_Otx2	ENSMUST00000094451.4|Gpr157|ENSMUSG00000047875.7|G protein-coupled receptor 157
mm39_v1_chr15_+_99600149_99600196	0.669266	Pitx2_Otx2	ENSMUST00000229236.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr7_-_46316767_46316808	0.668833	Pitx2_Otx2	ENSMUST00000168335.3|Tph1|ENSMUSG00000040046.15|tryptophan hydroxylase 1	ENSMUST00000107669.9|Tph1|ENSMUSG00000040046.15|tryptophan hydroxylase 1
mm39_v1_chr6_+_123026921_123026938	0.667757	Pitx2_Otx2	ENSMUST00000077228.11|Clec4b1|ENSMUSG00000030147.13|C-type lectin domain family 4, member b1
mm39_v1_chr2_-_132089543_132089574	0.666818	Pitx2_Otx2	ENSMUST00000110164.8|Tmem230|ENSMUSG00000027341.11|transmembrane protein 230
mm39_v1_chr19_-_6036171_6036171	0.666728	Pitx2_Otx2	ENSMUST00000041827.8|Slc22a20|ENSMUSG00000037451.9|solute carrier family 22 (organic anion transporter), member 20
mm39_v1_chr13_-_38178059_38178193	0.665804	Pitx2_Otx2	ENSMUST00000225319.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000225246.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000021864.8|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha
mm39_v1_chr1_+_143614753_143614788	0.663154	Pitx2_Otx2	ENSMUST00000145969.8|Glrx2|ENSMUSG00000018196.19|glutaredoxin 2 (thioltransferase)
mm39_v1_chr2_+_119039456_119039517	0.661544	Pitx2_Otx2	ENSMUST00000102519.5|Zfyve19|ENSMUSG00000068580.12|zinc finger, FYVE domain containing 19
mm39_v1_chr8_+_47246534_47246557	0.660148	Pitx2_Otx2	ENSMUST00000210218.2|Irf2|ENSMUSG00000031627.10|interferon regulatory factor 2
mm39_v1_chr16_+_17437205_17437253	0.659156	Pitx2_Otx2	ENSMUST00000006053.13|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000231311.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000163476.10|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000231257.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000165363.10|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000232043.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000090159.13|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000232442.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4
mm39_v1_chr7_+_45175754_45175874	0.657564	Pitx2_Otx2	ENSMUST00000211227.2|Plekha4|ENSMUSG00000040428.20|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4	ENSMUST00000051810.15|Plekha4|ENSMUSG00000040428.20|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
mm39_v1_chr13_-_100382831_100382831	0.656878	Pitx2_Otx2	ENSMUST00000049789.3|Naip5|ENSMUSG00000071203.7|NLR family, apoptosis inhibitory protein 5
mm39_v1_chr12_+_83997382_83997477	0.654812	Pitx2_Otx2	ENSMUST00000053744.9|Riox1|ENSMUSG00000046791.9|ribosomal oxygenase 1
mm39_v1_chr2_+_30171055_30171055	0.654417	Pitx2_Otx2	ENSMUST00000143119.3|Gm28038|ENSMUSG00000098794.2|predicted gene, 28038
mm39_v1_chr10_-_118168313_118168313	0.653419	Pitx2_Otx2	ENSMUST00000179851.3|Gm9044|ENSMUSG00000112419.2|predicted gene 9044
mm39_v1_chr7_-_102264194_102264194	0.652337	Pitx2_Otx2	ENSMUST00000098222.2|Olfr553|ENSMUSG00000073972.3|olfactory receptor 553
mm39_v1_chr2_-_145776934_145776934	0.65121	Pitx2_Otx2	ENSMUST00000001818.5|Crnkl1|ENSMUSG00000001767.6|crooked neck pre-mRNA splicing factor 1
mm39_v1_chr9_+_98724556_98724556	0.648092	Pitx2_Otx2	ENSMUST00000170349.3|Prr23a1|ENSMUSG00000091080.3|proline rich 23A, member 1
mm39_v1_chrX_-_93408176_93408176	0.64595	Pitx2_Otx2	ENSMUST00000239046.2|CXorf58|ENSMUSG00000118554.2|family with sequence similarity 90, member A1B
mm39_v1_chr8_+_82582953_82583006	0.645806	Pitx2_Otx2	ENSMUST00000109851.3|Inpp4b|ENSMUSG00000037940.18|inositol polyphosphate-4-phosphatase, type II
mm39_v1_chr7_+_42826999_42827047	0.645432	Pitx2_Otx2	ENSMUST00000202535.4|Zfp936|ENSMUSG00000064194.11|zinc finger protein 936	ENSMUST00000200973.4|Zfp936|ENSMUSG00000064194.11|zinc finger protein 936
mm39_v1_chr1_-_192812509_192812580	0.643761	Pitx2_Otx2	ENSMUST00000085555.7|Utp25|ENSMUSG00000016181.10|UTP25 small subunit processome component
mm39_v1_chr7_-_33929667_33929704	0.641379	Pitx2_Otx2	ENSMUST00000206415.2|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr7_-_79974166_79974206	0.640784	Pitx2_Otx2	ENSMUST00000047362.11|Rccd1|ENSMUSG00000038930.12|RCC1 domain containing 1	ENSMUST00000121882.8|Rccd1|ENSMUSG00000038930.12|RCC1 domain containing 1
mm39_v1_chr1_-_121495623_121495718	0.633746	Pitx2_Otx2	ENSMUST00000001724.12|Ddx18|ENSMUSG00000001674.12|DEAD box helicase 18
mm39_v1_chr3_+_79791798_79791904	0.633419	Pitx2_Otx2	ENSMUST00000118853.8|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B	ENSMUST00000145992.2|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr11_-_100583265_100583300	0.632139	Pitx2_Otx2	ENSMUST00000153494.2|Zfp385c|ENSMUSG00000014198.16|zinc finger protein 385C
mm39_v1_chr8_+_70992334_70992360	0.630576	Pitx2_Otx2	ENSMUST00000093454.8|Ell|ENSMUSG00000070002.8|elongation factor RNA polymerase II
mm39_v1_chr5_-_142891565_142891588	0.627789	Pitx2_Otx2	ENSMUST00000171419.8|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr9_-_103242096_103242164	0.627438	Pitx2_Otx2	ENSMUST00000116517.9|Cdv3|ENSMUSG00000032803.16|carnitine deficiency-associated gene expressed in ventricle 3
mm39_v1_chr1_+_9978863_9978895	0.627163	Pitx2_Otx2	ENSMUST00000052843.12|Mcmdc2|ENSMUSG00000046101.17|minichromosome maintenance domain containing 2	ENSMUST00000171802.8|Mcmdc2|ENSMUSG00000046101.17|minichromosome maintenance domain containing 2	ENSMUST00000125294.9|Mcmdc2|ENSMUSG00000046101.17|minichromosome maintenance domain containing 2	ENSMUST00000140948.9|Mcmdc2|ENSMUSG00000046101.17|minichromosome maintenance domain containing 2
mm39_v1_chrY_+_2932582_2932582	0.626419	Pitx2_Otx2	ENSMUST00000188358.2|Gm29289|ENSMUSG00000101667.2|predicted gene 29289
mm39_v1_chr7_-_3218968_3219029	0.626113	Pitx2_Otx2	ENSMUST00000171749.3|AU018091|ENSMUSG00000054753.10|expressed sequence AU018091
mm39_v1_chr17_-_47813201_47813221	0.626059	Pitx2_Otx2	ENSMUST00000233174.2|Taf8|ENSMUSG00000023980.8|TATA-box binding protein associated factor 8	ENSMUST00000233121.2|Taf8|ENSMUSG00000023980.8|TATA-box binding protein associated factor 8	ENSMUST00000067103.4|Taf8|ENSMUSG00000023980.8|TATA-box binding protein associated factor 8
mm39_v1_chr10_+_40225272_40225385	0.624988	Pitx2_Otx2	ENSMUST00000044672.11|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19	ENSMUST00000095743.4|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19
mm39_v1_chr9_-_50528727_50528768	0.620655	Pitx2_Otx2	ENSMUST00000131351.8|Nkapd1|ENSMUSG00000059820.15|NKAP domain containing 1	ENSMUST00000171462.8|Nkapd1|ENSMUSG00000059820.15|NKAP domain containing 1
mm39_v1_chrY_-_3306449_3306449	0.620501	Pitx2_Otx2	ENSMUST00000189592.7|Gm21677|ENSMUSG00000093918.8|predicted gene, 21677
mm39_v1_chrY_-_3378783_3378783	0.620501	Pitx2_Otx2	ENSMUST00000187277.7|Gm21704|ENSMUSG00000093987.8|predicted gene, 21704
mm39_v1_chr17_+_28532487_28532555	0.620114	Pitx2_Otx2	ENSMUST00000114803.9|Fance|ENSMUSG00000007570.17|Fanconi anemia, complementation group E	ENSMUST00000114801.9|Fance|ENSMUSG00000007570.17|Fanconi anemia, complementation group E	ENSMUST00000114804.11|Fance|ENSMUSG00000007570.17|Fanconi anemia, complementation group E
mm39_v1_chr11_-_3926778_3926778	0.61992	Pitx2_Otx2	ENSMUST00000042344.2|4930556J24Rik|ENSMUSG00000034493.2|RIKEN cDNA 4930556J24 gene
mm39_v1_chr3_-_95763160_95763203	0.619465	Pitx2_Otx2	ENSMUST00000015892.14|Prpf3|ENSMUSG00000015748.14|pre-mRNA processing factor 3
mm39_v1_chr6_-_83504471_83504482	0.618856	Pitx2_Otx2	ENSMUST00000141904.8|Actg2|ENSMUSG00000059430.15|actin, gamma 2, smooth muscle, enteric
mm39_v1_chr7_-_28135616_28135767	0.614316	Pitx2_Otx2	ENSMUST00000208199.2|Samd4b|ENSMUSG00000109336.2|sterile alpha motif domain containing 4B
mm39_v1_chr16_+_20470402_20470462	0.613464	Pitx2_Otx2	ENSMUST00000007212.9|Psmd2|ENSMUSG00000006998.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	ENSMUST00000232629.2|Psmd2|ENSMUSG00000006998.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
mm39_v1_chr3_-_95763065_95763134	0.612516	Pitx2_Otx2	ENSMUST00000161476.8|Prpf3|ENSMUSG00000015748.14|pre-mRNA processing factor 3
mm39_v1_chr7_-_133833854_133833879	0.612229	Pitx2_Otx2	ENSMUST00000127524.2|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chr10_+_81156937_81157081	0.609948	Pitx2_Otx2	ENSMUST00000050867.8|Cactin|ENSMUSG00000034889.9|cactin, spliceosome C complex subunit
mm39_v1_chr5_+_105706713_105706738	0.608519	Pitx2_Otx2	ENSMUST00000153754.2|Lrrc8c|ENSMUSG00000054720.13|leucine rich repeat containing 8 family, member C
mm39_v1_chr2_-_127050161_127050209	0.607268	Pitx2_Otx2	ENSMUST00000056146.2|1810024B03Rik|ENSMUSG00000044145.3|RIKEN cDNA 1810024B03 gene
mm39_v1_chr7_-_133833734_133833783	0.606419	Pitx2_Otx2	ENSMUST00000134504.8|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chr11_-_106278892_106278931	0.60372	Pitx2_Otx2	ENSMUST00000106813.9|Icam2|ENSMUSG00000001029.16|intercellular adhesion molecule 2	ENSMUST00000141146.2|Icam2|ENSMUSG00000001029.16|intercellular adhesion molecule 2
mm39_v1_chr2_-_38816229_38816366	0.603469	Pitx2_Otx2	ENSMUST00000076275.11|Nr6a1|ENSMUSG00000063972.14|nuclear receptor subfamily 6, group A, member 1	ENSMUST00000142130.2|Nr6a1|ENSMUSG00000063972.14|nuclear receptor subfamily 6, group A, member 1
mm39_v1_chr5_+_24628802_24628864	0.603016	Pitx2_Otx2	ENSMUST00000153274.2|Slc4a2|ENSMUSG00000028962.15|solute carrier family 4 (anion exchanger), member 2	ENSMUST00000141966.8|Slc4a2|ENSMUSG00000028962.15|solute carrier family 4 (anion exchanger), member 2
mm39_v1_chr1_-_162687488_162687542	0.600932	Pitx2_Otx2	ENSMUST00000134098.8|Fmo1|ENSMUSG00000040181.15|flavin containing monooxygenase 1	ENSMUST00000111518.3|Fmo1|ENSMUSG00000040181.15|flavin containing monooxygenase 1
mm39_v1_chr15_+_103411689_103411715	0.59817	Pitx2_Otx2	ENSMUST00000226493.2|Pde1b|ENSMUSG00000022489.7|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm39_v1_chr11_+_4110346_4110414	0.59463	Pitx2_Otx2	ENSMUST00000002198.4|Sf3a1|ENSMUSG00000002129.12|splicing factor 3a, subunit 1
mm39_v1_chr9_+_86904067_86904134	0.594366	Pitx2_Otx2	ENSMUST00000168529.9|Cyb5r4|ENSMUSG00000032872.17|cytochrome b5 reductase 4
mm39_v1_chr6_+_29859660_29859684	0.59203	Pitx2_Otx2	ENSMUST00000128927.9|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr7_-_19307718_19307770	0.589677	Pitx2_Otx2	ENSMUST00000117222.2|Gemin7|ENSMUSG00000044709.7|gem nuclear organelle associated protein 7
mm39_v1_chr7_-_104991477_104991477	0.588855	Pitx2_Otx2	ENSMUST00000213290.2|Olfr691|ENSMUSG00000043948.3|olfactory receptor 691
mm39_v1_chr14_-_79628106_79628218	0.585916	Pitx2_Otx2	ENSMUST00000022597.15|Naa16|ENSMUSG00000022020.16|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm39_v1_chr11_+_96820220_96820247	0.58496	Pitx2_Otx2	ENSMUST00000062172.6|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr8_+_23114035_23114059	0.58395	Pitx2_Otx2	ENSMUST00000033936.8|Dkk4|ENSMUSG00000031535.8|dickkopf WNT signaling pathway inhibitor 4
mm39_v1_chr4_-_52859227_52859227	0.580682	Pitx2_Otx2	ENSMUST00000107670.3|Olfr273|ENSMUSG00000049648.5|olfactory receptor 273
mm39_v1_chr1_+_164103127_164103229	0.578849	Pitx2_Otx2	ENSMUST00000027867.7|Ccdc181|ENSMUSG00000026578.7|coiled-coil domain containing 181
mm39_v1_chr3_+_129672205_129672355	0.578157	Pitx2_Otx2	ENSMUST00000029629.15|Pla2g12a|ENSMUSG00000027999.16|phospholipase A2, group XIIA
mm39_v1_chr1_+_178014983_178015280	0.577913	Pitx2_Otx2	ENSMUST00000161075.8|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2	ENSMUST00000027783.14|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2
mm39_v1_chr1_-_170886924_170886972	0.577398	Pitx2_Otx2	ENSMUST00000164044.8|Fcgr3|ENSMUSG00000059498.14|Fc receptor, IgG, low affinity III	ENSMUST00000169017.8|Fcgr3|ENSMUSG00000059498.14|Fc receptor, IgG, low affinity III
mm39_v1_chr6_-_142453531_142453688	0.576714	Pitx2_Otx2	ENSMUST00000134191.3|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239397.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239395.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000032373.12|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B
mm39_v1_chr4_-_138590764_138590802	0.57643	Pitx2_Otx2	ENSMUST00000030524.14|Pla2g5|ENSMUSG00000041193.16|phospholipase A2, group V	ENSMUST00000102513.8|Pla2g5|ENSMUSG00000041193.16|phospholipase A2, group V
mm39_v1_chr2_+_32477069_32477145	0.574522	Pitx2_Otx2	ENSMUST00000102818.11|St6galnac4|ENSMUSG00000079442.13|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm39_v1_chr13_-_55677109_55677180	0.574278	Pitx2_Otx2	ENSMUST00000223563.2|Dok3|ENSMUSG00000035711.6|docking protein 3
mm39_v1_chr10_-_117215920_117215956	0.57385	Pitx2_Otx2	ENSMUST00000175924.2|Cpsf6|ENSMUSG00000055531.13|cleavage and polyadenylation specific factor 6
mm39_v1_chr19_-_6127211_6127261	0.573034	Pitx2_Otx2	ENSMUST00000160590.2|Vps51|ENSMUSG00000024797.15|VPS51 GARP complex subunit	ENSMUST00000025711.13|Vps51|ENSMUSG00000024797.15|VPS51 GARP complex subunit
mm39_v1_chrX_-_50889955_50890110	0.571782	Pitx2_Otx2	ENSMUST00000069509.4|Usp26|ENSMUSG00000055780.11|ubiquitin specific peptidase 26	ENSMUST00000114869.8|Usp26|ENSMUSG00000055780.11|ubiquitin specific peptidase 26
mm39_v1_chr11_+_117198958_117199010	0.570839	Pitx2_Otx2	ENSMUST00000153668.8|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr2_-_119039247_119039283	0.569486	Pitx2_Otx2	ENSMUST00000038439.4|Dnajc17|ENSMUSG00000034278.4|DnaJ heat shock protein family (Hsp40) member C17
mm39_v1_chrY_-_9200643_9200643	0.568763	Pitx2_Otx2	ENSMUST00000179595.2|Gm21721|ENSMUSG00000094679.3|predicted gene, 21721
mm39_v1_chr14_+_53574579_53574579	0.567766	Pitx2_Otx2	ENSMUST00000179580.3|Trav13n-3|ENSMUSG00000096038.3|T cell receptor alpha variable 13N-3
mm39_v1_chr9_+_65831489_65831517	0.567508	Pitx2_Otx2	ENSMUST00000130798.3|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr15_-_83006957_83007002	0.565671	Pitx2_Otx2	ENSMUST00000018184.10|Rrp7a|ENSMUSG00000018040.10|ribosomal RNA processing 7 homolog A
mm39_v1_chr11_-_59727752_59727761	0.564764	Pitx2_Otx2	ENSMUST00000156837.2|Cops3|ENSMUSG00000019373.12|COP9 signalosome subunit 3
mm39_v1_chr19_-_61164747_61164747	0.564215	Pitx2_Otx2	ENSMUST00000180168.2|Gm7102|ENSMUSG00000094649.2|predicted gene 7102
mm39_v1_chr6_+_83326424_83326478	0.562082	Pitx2_Otx2	ENSMUST00000136501.2|Bola3|ENSMUSG00000045160.15|bolA-like 3 (E. coli)
mm39_v1_chr14_-_54648057_54648131	0.560625	Pitx2_Otx2	ENSMUST00000200545.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	ENSMUST00000227967.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr17_+_34573760_34573810	0.558688	Pitx2_Otx2	ENSMUST00000178562.2|Btnl2|ENSMUSG00000024340.16|butyrophilin-like 2	ENSMUST00000025198.15|Btnl2|ENSMUSG00000024340.16|butyrophilin-like 2
mm39_v1_chr5_+_135398796_135398851	0.558298	Pitx2_Otx2	ENSMUST00000000940.15|Nsun5|ENSMUSG00000000916.16|NOL1/NOP2/Sun domain family, member 5
mm39_v1_chr15_-_85695291_85695450	0.558154	Pitx2_Otx2	ENSMUST00000125947.8|Cdpf1|ENSMUSG00000064284.13|cysteine rich, DPF motif domain containing 1
mm39_v1_chrY_-_3345329_3345329	0.556775	Pitx2_Otx2	ENSMUST00000186047.7|Gm21693|ENSMUSG00000094511.8|predicted gene, 21693
mm39_v1_chr6_-_143045844_143045889	0.555016	Pitx2_Otx2	ENSMUST00000204140.2|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5
mm39_v1_chr5_+_138062515_138062515	0.554445	Pitx2_Otx2	ENSMUST00000178402.2|Smok3c|ENSMUSG00000075598.6|sperm motility kinase 3C
mm39_v1_chr7_+_40803265_40803265	0.553575	Pitx2_Otx2	ENSMUST00000206490.2|Gm5592|ENSMUSG00000072259.4|predicted gene 5592
mm39_v1_chr4_+_43441939_43441939	0.55276	Pitx2_Otx2	ENSMUST00000060864.13|Tesk1|ENSMUSG00000028458.13|testis specific protein kinase 1
mm39_v1_chrY_-_6917117_6917117	0.551661	Pitx2_Otx2	ENSMUST00000178016.2|Gm20830|ENSMUSG00000096686.3|predicted gene, 20830
mm39_v1_chr12_-_115410489_115410525	0.550105	Pitx2_Otx2	ENSMUST00000194581.2|Ighv1-62-2|ENSMUSG00000096078.3|immunoglobulin heavy variable 1-62-2
mm39_v1_chr2_+_3425159_3425244	0.548535	Pitx2_Otx2	ENSMUST00000100463.10|Dclre1c|ENSMUSG00000026648.19|DNA cross-link repair 1C	ENSMUST00000061852.12|Dclre1c|ENSMUSG00000026648.19|DNA cross-link repair 1C	ENSMUST00000102988.10|Dclre1c|ENSMUSG00000026648.19|DNA cross-link repair 1C	ENSMUST00000115066.8|Dclre1c|ENSMUSG00000026648.19|DNA cross-link repair 1C
mm39_v1_chr18_+_31922173_31922224	0.547835	Pitx2_Otx2	ENSMUST00000025106.5|Polr2d|ENSMUSG00000024258.5|polymerase (RNA) II (DNA directed) polypeptide D	ENSMUST00000234146.2|Polr2d|ENSMUSG00000024258.5|polymerase (RNA) II (DNA directed) polypeptide D
mm39_v1_chr6_+_86415648_86415695	0.547663	Pitx2_Otx2	ENSMUST00000113700.8|C87436|ENSMUSG00000046679.17|expressed sequence C87436
mm39_v1_chr19_-_47907628_47907703	0.547632	Pitx2_Otx2	ENSMUST00000237029.2|Itprip|ENSMUSG00000117975.2|inositol 1,4,5-triphosphate receptor interacting protein
mm39_v1_chr10_+_84458143_84458169	0.546145	Pitx2_Otx2	ENSMUST00000077175.7|Polr3b|ENSMUSG00000034453.9|polymerase (RNA) III (DNA directed) polypeptide B
mm39_v1_chr13_-_34119937_34120181	0.546089	Pitx2_Otx2	ENSMUST00000170991.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000171252.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000164627.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000017188.14|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000167163.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000043552.17|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm39_v1_chr3_-_157742182_157742201	0.545024	Pitx2_Otx2	ENSMUST00000069025.14|Srsf11|ENSMUSG00000055436.19|serine and arginine-rich splicing factor 11
mm39_v1_chr8_+_71126012_71126082	0.539579	Pitx2_Otx2	ENSMUST00000146972.3|Lsm4|ENSMUSG00000031848.16|LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated	ENSMUST00000210071.2|Lsm4|ENSMUSG00000031848.16|LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated	ENSMUST00000210987.2|Lsm4|ENSMUSG00000031848.16|LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chrX_+_133486391_133486447	0.539345	Pitx2_Otx2	ENSMUST00000113211.8|Rpl36a|ENSMUSG00000079435.10|ribosomal protein L36A
mm39_v1_chr6_+_119213541_119213559	0.533832	Pitx2_Otx2	ENSMUST00000186622.3|Cacna2d4|ENSMUSG00000041460.17|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm39_v1_chr12_-_115611981_115612007	0.533527	Pitx2_Otx2	ENSMUST00000103540.3|Ighv8-12|ENSMUSG00000076731.4|immunoglobulin heavy variable V8-12	ENSMUST00000199266.2|Ighv8-12|ENSMUSG00000076731.4|immunoglobulin heavy variable V8-12
mm39_v1_chr5_-_143133260_143133336	0.533355	Pitx2_Otx2	ENSMUST00000215102.2|Olfr718-ps1|ENSMUSG00000090981.7|olfactory receptor 718, pseudogene 1	ENSMUST00000213631.2|Olfr718-ps1|ENSMUSG00000090981.7|olfactory receptor 718, pseudogene 1	ENSMUST00000164536.5|Olfr718-ps1|ENSMUSG00000090981.7|olfactory receptor 718, pseudogene 1
mm39_v1_chr6_-_130363837_130363837	0.532675	Pitx2_Otx2	ENSMUST00000032288.6|Klra1|ENSMUSG00000079853.6|killer cell lectin-like receptor, subfamily A, member 1
mm39_v1_chr14_+_52875909_52875972	0.532298	Pitx2_Otx2	ENSMUST00000103571.2|Trav6-1|ENSMUSG00000076762.2|T cell receptor alpha variable 6-1
mm39_v1_chr17_-_26099832_26099832	0.531514	Pitx2_Otx2	ENSMUST00000176696.3|Wfikkn1|ENSMUSG00000071192.7|WAP, FS, Ig, KU, and NTR-containing protein 1
mm39_v1_chr1_+_131616407_131616476	0.530354	Pitx2_Otx2	ENSMUST00000064679.9|Rab7b|ENSMUSG00000052688.13|RAB7B, member RAS oncogene family	ENSMUST00000064664.10|Rab7b|ENSMUSG00000052688.13|RAB7B, member RAS oncogene family	ENSMUST00000136247.8|Rab7b|ENSMUSG00000052688.13|RAB7B, member RAS oncogene family
mm39_v1_chr10_+_63265871_63265883	0.529782	Pitx2_Otx2	ENSMUST00000105441.8|Ctnna3|ENSMUSG00000060843.12|catenin (cadherin associated protein), alpha 3
mm39_v1_chr15_-_3333003_3333044	0.528206	Pitx2_Otx2	ENSMUST00000165386.2|Ccdc152|ENSMUSG00000091119.3|coiled-coil domain containing 152
mm39_v1_chr10_-_80156337_80156397	0.527924	Pitx2_Otx2	ENSMUST00000020341.9|2310011J03Rik|ENSMUSG00000020133.9|RIKEN cDNA 2310011J03 gene
mm39_v1_chr1_+_46106006_46106056	0.526436	Pitx2_Otx2	ENSMUST00000238212.2|Dnah7b|ENSMUSG00000041144.13|dynein, axonemal, heavy chain 7B
mm39_v1_chr3_-_16060545_16060601	0.52134	Pitx2_Otx2	ENSMUST00000194367.6|Gm5150|ENSMUSG00000078780.8|predicted gene 5150
mm39_v1_chr6_+_86415698_86415712	0.520078	Pitx2_Otx2	ENSMUST00000113698.8|C87436|ENSMUSG00000046679.17|expressed sequence C87436
mm39_v1_chr2_+_127267069_127267119	0.519142	Pitx2_Otx2	ENSMUST00000062211.4|Gpat2|ENSMUSG00000046338.5|glycerol-3-phosphate acyltransferase 2, mitochondrial
mm39_v1_chr17_-_22533794_22533827	0.518219	Pitx2_Otx2	ENSMUST00000233465.2|Gm7072|ENSMUSG00000117284.2|predicted gene 7072
mm39_v1_chr13_+_23935088_23935109	0.51778	Pitx2_Otx2	ENSMUST00000078369.3|H2ac4|ENSMUSG00000061615.3|H2A clustered histone 4
mm39_v1_chr7_+_43865369_43865369	0.515574	Pitx2_Otx2	ENSMUST00000074359.4|Klk1b5|ENSMUSG00000066512.4|kallikrein 1-related peptidase b5
mm39_v1_chr18_+_44960813_44960813	0.514187	Pitx2_Otx2	ENSMUST00000037763.11|Ythdc2|ENSMUSG00000034653.12|YTH domain containing 2
mm39_v1_chrY_+_3771673_3771673	0.513548	Pitx2_Otx2	ENSMUST00000186140.7|Gm3376|ENSMUSG00000096520.8|predicted gene 3376
mm39_v1_chr16_-_13485986_13486045	0.512687	Pitx2_Otx2	ENSMUST00000058884.10|Parn|ENSMUSG00000022685.10|poly(A)-specific ribonuclease (deadenylation nuclease)
mm39_v1_chr16_+_36097313_36097435	0.512251	Pitx2_Otx2	ENSMUST00000232150.2|Stfa1|ENSMUSG00000071562.7|stefin A1
mm39_v1_chr16_-_16494269_16494269	0.512005	Pitx2_Otx2	ENSMUST00000206365.3|Olfr19|ENSMUSG00000048101.7|olfactory receptor 19
mm39_v1_chr7_-_33896033_33896100	0.511835	Pitx2_Otx2	ENSMUST00000148381.3|Pdcd2l|ENSMUSG00000002635.12|programmed cell death 2-like	ENSMUST00000002710.10|Pdcd2l|ENSMUSG00000002635.12|programmed cell death 2-like
mm39_v1_chr5_+_66417488_66417655	0.511778	Pitx2_Otx2	ENSMUST00000031109.7|Nsun7|ENSMUSG00000029206.14|NOL1/NOP2/Sun domain family, member 7
mm39_v1_chr7_-_19338349_19338418	0.510862	Pitx2_Otx2	ENSMUST00000086041.7|Clasrp|ENSMUSG00000061028.8|CLK4-associating serine/arginine rich protein
mm39_v1_chr9_+_69902697_69902760	0.509715	Pitx2_Otx2	ENSMUST00000165389.8|Bnip2|ENSMUSG00000011958.18|BCL2/adenovirus E1B interacting protein 2
mm39_v1_chr7_-_44854316_44854316	0.509543	Pitx2_Otx2	ENSMUST00000121017.5|Kash5|ENSMUSG00000038292.15|KASH domain containing 5
mm39_v1_chrY_+_2900989_2900989	0.508336	Pitx2_Otx2	ENSMUST00000187842.7|Gm10352|ENSMUSG00000091987.9|predicted gene 10352
mm39_v1_chr14_-_19439771_19439771	0.507006	Pitx2_Otx2	ENSMUST00000170521.8|Gm2888|ENSMUSG00000090487.9|predicted gene 2888
mm39_v1_chr2_-_89855921_89855921	0.506741	Pitx2_Otx2	ENSMUST00000216616.3|Olfr1264|ENSMUSG00000075069.4|olfactory receptor 1264
mm39_v1_chrY_+_13495642_13495642	0.502144	Pitx2_Otx2	ENSMUST00000178940.2|Gm20773|ENSMUSG00000095900.3|predicted gene, 20773
mm39_v1_chr8_+_71068791_71068841	0.50032	Pitx2_Otx2	ENSMUST00000210609.2|Lrrc25|ENSMUSG00000049988.6|leucine rich repeat containing 25
mm39_v1_chr6_-_116561156_116561156	0.498913	Pitx2_Otx2	ENSMUST00000061723.6|Olfr215|ENSMUSG00000050654.6|olfactory receptor 215
mm39_v1_chr11_+_119283887_119283926	0.498836	Pitx2_Otx2	ENSMUST00000093902.12|Rnf213|ENSMUSG00000070327.15|ring finger protein 213	ENSMUST00000131035.10|Rnf213|ENSMUSG00000070327.15|ring finger protein 213
mm39_v1_chrY_+_5727496_5727496	0.496749	Pitx2_Otx2	ENSMUST00000180372.2|Gm20914|ENSMUSG00000096268.3|predicted gene, 20914
mm39_v1_chr11_-_93856783_93856869	0.493918	Pitx2_Otx2	ENSMUST00000021220.10|Nme1|ENSMUSG00000037601.12|NME/NM23 nucleoside diphosphate kinase 1
mm39_v1_chr12_+_33978401_33978424	0.492094	Pitx2_Otx2	ENSMUST00000061035.4|Ferd3l|ENSMUSG00000046518.4|Fer3 like bHLH transcription factor
mm39_v1_chr14_+_20753074_20753219	0.491514	Pitx2_Otx2	ENSMUST00000071215.5|Chchd1|ENSMUSG00000063787.5|coiled-coil-helix-coiled-coil-helix domain containing 1	ENSMUST00000224633.2|Chchd1|ENSMUSG00000063787.5|coiled-coil-helix-coiled-coil-helix domain containing 1
mm39_v1_chrY_-_2796205_2796205	0.490716	Pitx2_Otx2	ENSMUST00000187482.2|Gm4064|ENSMUSG00000102053.2|predicted gene 4064
mm39_v1_chr4_-_155729865_155729865	0.490526	Pitx2_Otx2	ENSMUST00000115821.3|Gm10563|ENSMUSG00000073682.4|predicted gene 10563
mm39_v1_chr4_+_62478062_62478084	0.490489	Pitx2_Otx2	ENSMUST00000065870.14|Rgs3|ENSMUSG00000059810.19|regulator of G-protein signaling 3
mm39_v1_chr6_+_83133441_83133501	0.485239	Pitx2_Otx2	ENSMUST00000203203.2|1700003E16Rik|ENSMUSG00000030030.6|RIKEN cDNA 1700003E16 gene
mm39_v1_chr5_+_92524813_92524834	0.483512	Pitx2_Otx2	ENSMUST00000120781.8|Art3|ENSMUSG00000034842.17|ADP-ribosyltransferase 3
mm39_v1_chr10_+_80905869_80905880	0.483044	Pitx2_Otx2	ENSMUST00000005057.7|Thop1|ENSMUSG00000004929.13|thimet oligopeptidase 1
mm39_v1_chr9_+_114560235_114560308	0.483042	Pitx2_Otx2	ENSMUST00000035007.10|Cmtm6|ENSMUSG00000032434.10|CKLF-like MARVEL transmembrane domain containing 6
mm39_v1_chr3_-_153610368_153610368	0.481561	Pitx2_Otx2	ENSMUST00000188338.7|Msh4|ENSMUSG00000005493.16|mutS homolog 4
mm39_v1_chr3_+_122717852_122718051	0.479452	Pitx2_Otx2	ENSMUST00000106429.6|1810037I17Rik|ENSMUSG00000054091.10|RIKEN cDNA 1810037I17 gene
mm39_v1_chr19_+_4198615_4198664	0.477987	Pitx2_Otx2	ENSMUST00000123874.8|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000008893.9|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000237125.2|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B
mm39_v1_chrX_+_134274033_134274033	0.476766	Pitx2_Otx2	ENSMUST00000113173.8|Gm5128|ENSMUSG00000094004.8|predicted gene 5128	ENSMUST00000180198.2|Gm5128|ENSMUSG00000094004.8|predicted gene 5128
mm39_v1_chr11_+_97340962_97341008	0.475099	Pitx2_Otx2	ENSMUST00000107601.8|Arhgap23|ENSMUSG00000049807.17|Rho GTPase activating protein 23
mm39_v1_chr2_+_90884612_90884652	0.474481	Pitx2_Otx2	ENSMUST00000185715.7|Psmc3|ENSMUSG00000002102.16|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm39_v1_chr2_+_166635687_166635733	0.474025	Pitx2_Otx2	ENSMUST00000151826.2|Trp53rkb|ENSMUSG00000042854.10|transformation related protein 53 regulating kinase B
mm39_v1_chr19_+_45352514_45352550	0.473974	Pitx2_Otx2	ENSMUST00000224318.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein	ENSMUST00000223684.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chr12_+_116239006_116239006	0.472533	Pitx2_Otx2	ENSMUST00000090195.5|Gm11027|ENSMUSG00000078984.2|predicted gene 11027
mm39_v1_chr17_+_32671689_32671705	0.471415	Pitx2_Otx2	ENSMUST00000237491.2|Cyp4f39|ENSMUSG00000061126.6|cytochrome P450, family 4, subfamily f, polypeptide 39
mm39_v1_chr4_+_152284261_152284329	0.467461	Pitx2_Otx2	ENSMUST00000105652.3|Acot7|ENSMUSG00000028937.15|acyl-CoA thioesterase 7
mm39_v1_chr7_-_18301211_18301230	0.466021	Pitx2_Otx2	ENSMUST00000094794.5|Psg27|ENSMUSG00000070797.5|pregnancy-specific glycoprotein 27
mm39_v1_chr11_+_70350963_70350980	0.465173	Pitx2_Otx2	ENSMUST00000126105.2|Zmynd15|ENSMUSG00000040829.15|zinc finger, MYND-type containing 15
mm39_v1_chr13_-_120356282_120356321	0.464802	Pitx2_Otx2	ENSMUST00000178510.2|Tcstv1|ENSMUSG00000096284.3|2-cell-stage, variable group, member 1	ENSMUST00000190512.2|Tcstv1|ENSMUSG00000096284.3|2-cell-stage, variable group, member 1
mm39_v1_chr11_-_73348284_73348334	0.464172	Pitx2_Otx2	ENSMUST00000121209.3|Olfr380|ENSMUSG00000072709.4|olfactory receptor 380	ENSMUST00000127789.3|Olfr380|ENSMUSG00000072709.4|olfactory receptor 380
mm39_v1_chrY_+_6268725_6268725	0.463561	Pitx2_Otx2	ENSMUST00000179410.2|Gm20873|ENSMUSG00000095148.3|predicted gene, 20873
mm39_v1_chr14_-_7648948_7648998	0.459172	Pitx2_Otx2	ENSMUST00000112630.9|Nek10|ENSMUSG00000042567.21|NIMA (never in mitosis gene a)- related kinase 10	ENSMUST00000112631.9|Nek10|ENSMUSG00000042567.21|NIMA (never in mitosis gene a)- related kinase 10
mm39_v1_chr10_-_118173736_118173736	0.455508	Pitx2_Otx2	ENSMUST00000219760.2|Gm9045|ENSMUSG00000112027.2|predicted gene 9045
mm39_v1_chr11_-_55075855_55075908	0.455294	Pitx2_Otx2	ENSMUST00000039305.6|Slc36a2|ENSMUSG00000020264.6|solute carrier family 36 (proton/amino acid symporter), member 2
mm39_v1_chrY_-_7636973_7636973	0.450552	Pitx2_Otx2	ENSMUST00000179256.2|Gm20826|ENSMUSG00000094081.3|predicted gene, 20826
mm39_v1_chr16_+_4544221_4544232	0.449106	Pitx2_Otx2	ENSMUST00000154117.2|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2	ENSMUST00000004172.15|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2
mm39_v1_chr5_+_100946493_100946636	0.447692	Pitx2_Otx2	ENSMUST00000016977.15|Mrps18c|ENSMUSG00000016833.15|mitochondrial ribosomal protein S18C	ENSMUST00000112898.8|Mrps18c|ENSMUSG00000016833.15|mitochondrial ribosomal protein S18C	ENSMUST00000112901.2|Mrps18c|ENSMUSG00000016833.15|mitochondrial ribosomal protein S18C
mm39_v1_chr13_-_97274430_97274450	0.447499	Pitx2_Otx2	ENSMUST00000073456.9|Nsa2|ENSMUSG00000060739.9|NSA2 ribosome biogenesis homolog
mm39_v1_chr10_+_128736827_128736868	0.447199	Pitx2_Otx2	ENSMUST00000219317.2|Cd63|ENSMUSG00000025351.15|CD63 antigen
mm39_v1_chr7_+_28834391_28834431	0.44639	Pitx2_Otx2	ENSMUST00000160194.8|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4
mm39_v1_chr10_-_118190010_118190010	0.445698	Pitx2_Otx2	ENSMUST00000178998.3|Gm9049|ENSMUSG00000112919.2|predicted gene 9049
mm39_v1_chrX_-_8391193_8391193	0.445025	Pitx2_Otx2	ENSMUST00000115573.2|Gm14459|ENSMUSG00000079704.3|predicted gene 14459
mm39_v1_chrX_-_139857424_139857477	0.444693	Pitx2_Otx2	ENSMUST00000033805.15|Psmd10|ENSMUSG00000031429.15|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	ENSMUST00000112978.2|Psmd10|ENSMUSG00000031429.15|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
mm39_v1_chr15_-_72933053_72933083	0.442821	Pitx2_Otx2	ENSMUST00000089770.11|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9
mm39_v1_chr5_-_25910788_25910827	0.442418	Pitx2_Otx2	ENSMUST00000030773.12|Xrcc2|ENSMUSG00000028933.12|X-ray repair complementing defective repair in Chinese hamster cells 2
mm39_v1_chr8_-_106732607_106732607	0.442387	Pitx2_Otx2	ENSMUST00000227778.2|Dpep2nb|ENSMUSG00000115768.2|Dpep2 neighbor
mm39_v1_chr5_+_124621227_124621265	0.440759	Pitx2_Otx2	ENSMUST00000136567.2|Snrnp35|ENSMUSG00000029402.9|small nuclear ribonucleoprotein 35 (U11/U12)
mm39_v1_chr1_+_58841650_58841677	0.440244	Pitx2_Otx2	ENSMUST00000165549.8|Casp8|ENSMUSG00000026029.15|caspase 8
mm39_v1_chr17_+_80597632_80597711	0.439675	Pitx2_Otx2	ENSMUST00000227729.2|Morn2|ENSMUSG00000045257.11|MORN repeat containing 2	ENSMUST00000061703.10|Morn2|ENSMUSG00000045257.11|MORN repeat containing 2
mm39_v1_chr5_-_86320599_86320662	0.439087	Pitx2_Otx2	ENSMUST00000039373.14|Uba6|ENSMUSG00000035898.14|ubiquitin-like modifier activating enzyme 6
mm39_v1_chr6_-_99412306_99412326	0.438898	Pitx2_Otx2	ENSMUST00000113322.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1	ENSMUST00000176850.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1	ENSMUST00000176632.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr3_-_153617782_153617842	0.438847	Pitx2_Otx2	ENSMUST00000167111.6|Rabggtb|ENSMUSG00000038975.15|Rab geranylgeranyl transferase, b subunit
mm39_v1_chr7_+_119499322_119499331	0.438712	Pitx2_Otx2	ENSMUST00000106516.2|Lyrm1|ENSMUSG00000030922.13|LYR motif containing 1
mm39_v1_chr1_+_178015287_178015413	0.437822	Pitx2_Otx2	ENSMUST00000159284.2|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2
mm39_v1_chr7_-_126182347_126182425	0.437144	Pitx2_Otx2	ENSMUST00000098036.9|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	ENSMUST00000032962.11|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm39_v1_chr5_-_143098726_143098749	0.435704	Pitx2_Otx2	ENSMUST00000200607.5|Rnf216|ENSMUSG00000045078.13|ring finger protein 216	ENSMUST00000053498.13|Rnf216|ENSMUSG00000045078.13|ring finger protein 216
mm39_v1_chr12_-_99529767_99529888	0.435399	Pitx2_Otx2	ENSMUST00000176928.3|Foxn3|ENSMUSG00000033713.13|forkhead box N3	ENSMUST00000223484.2|Foxn3|ENSMUSG00000033713.13|forkhead box N3
mm39_v1_chr15_-_36555702_36555723	0.433311	Pitx2_Otx2	ENSMUST00000161202.8|Snx31|ENSMUSG00000013611.15|sorting nexin 31	ENSMUST00000013755.12|Snx31|ENSMUSG00000013611.15|sorting nexin 31
mm39_v1_chr3_+_41510160_41510195	0.431366	Pitx2_Otx2	ENSMUST00000026865.15|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000194181.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000195846.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr5_-_124564014_124564064	0.42867	Pitx2_Otx2	ENSMUST00000196329.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1	ENSMUST00000196644.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chr10_+_129298547_129298547	0.428638	Pitx2_Otx2	ENSMUST00000077836.3|Olfr787|ENSMUSG00000096497.3|olfactory receptor 787
mm39_v1_chr2_+_91560472_91560570	0.427296	Pitx2_Otx2	ENSMUST00000099712.10|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000111317.9|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000111316.9|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1	ENSMUST00000045705.14|Ambra1|ENSMUSG00000040506.17|autophagy/beclin 1 regulator 1
mm39_v1_chr12_+_103277234_103277288	0.427248	Pitx2_Otx2	ENSMUST00000191218.7|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A
mm39_v1_chr11_+_67167950_67168009	0.426471	Pitx2_Otx2	ENSMUST00000019625.12|Myh8|ENSMUSG00000055775.17|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm39_v1_chr10_-_128918779_128918779	0.426289	Pitx2_Otx2	ENSMUST00000213579.2|Olfr767|ENSMUSG00000059762.5|olfactory receptor 767
mm39_v1_chr3_-_153610528_153610528	0.425489	Pitx2_Otx2	ENSMUST00000190449.2|Msh4|ENSMUSG00000005493.16|mutS homolog 4
mm39_v1_chr3_-_157742204_157742266	0.423539	Pitx2_Otx2	ENSMUST00000137444.8|Srsf11|ENSMUSG00000055436.19|serine and arginine-rich splicing factor 11
mm39_v1_chr16_+_36097505_36097528	0.423245	Pitx2_Otx2	ENSMUST00000042097.11|Stfa1|ENSMUSG00000071562.7|stefin A1
mm39_v1_chr2_+_83791847_83791847	0.423175	Pitx2_Otx2	ENSMUST00000178960.2|Gm13693|ENSMUSG00000094336.2|predicted gene 13693
mm39_v1_chr10_+_81554753_81554753	0.422597	Pitx2_Otx2	ENSMUST00000085664.6|Zfp433|ENSMUSG00000096795.5|zinc finger protein 433
mm39_v1_chr11_+_54793743_54793759	0.420239	Pitx2_Otx2	ENSMUST00000149324.3|Gpx3|ENSMUSG00000018339.13|glutathione peroxidase 3
mm39_v1_chr2_-_28356294_28356369	0.418268	Pitx2_Otx2	ENSMUST00000127683.2|1700007K13Rik|ENSMUSG00000026831.17|RIKEN cDNA 1700007K13 gene	ENSMUST00000086370.11|1700007K13Rik|ENSMUSG00000026831.17|RIKEN cDNA 1700007K13 gene
mm39_v1_chr11_+_4136789_4136864	0.416123	Pitx2_Otx2	ENSMUST00000041042.13|Tbc1d10a|ENSMUSG00000034412.14|TBC1 domain family, member 10a	ENSMUST00000180088.2|Tbc1d10a|ENSMUSG00000034412.14|TBC1 domain family, member 10a
mm39_v1_chr8_+_110292524_110292663	0.415858	Pitx2_Otx2	ENSMUST00000034159.8|Txnl4b|ENSMUSG00000031723.9|thioredoxin-like 4B
mm39_v1_chr11_-_106890195_106890299	0.413023	Pitx2_Otx2	ENSMUST00000106768.2|Kpna2|ENSMUSG00000018362.15|karyopherin (importin) alpha 2	ENSMUST00000144834.8|Kpna2|ENSMUSG00000018362.15|karyopherin (importin) alpha 2
mm39_v1_chr17_-_25459086_25459132	0.411805	Pitx2_Otx2	ENSMUST00000038973.7|Gnptg|ENSMUSG00000035521.14|N-acetylglucosamine-1-phosphotransferase, gamma subunit	ENSMUST00000115154.11|Gnptg|ENSMUSG00000035521.14|N-acetylglucosamine-1-phosphotransferase, gamma subunit
mm39_v1_chr6_-_146403410_146403532	0.410859	Pitx2_Otx2	ENSMUST00000053273.15|Itpr2|ENSMUSG00000030287.16|inositol 1,4,5-triphosphate receptor 2
mm39_v1_chr6_+_90179768_90179768	0.410828	Pitx2_Otx2	ENSMUST00000078371.6|V1ra8|ENSMUSG00000062546.6|vomeronasal 1 receptor, A8
mm39_v1_chr15_+_102234551_102234587	0.410096	Pitx2_Otx2	ENSMUST00000166658.8|Pfdn5|ENSMUSG00000001289.13|prefoldin 5	ENSMUST00000062492.11|Pfdn5|ENSMUSG00000001289.13|prefoldin 5
mm39_v1_chr14_-_99231754_99231776	0.409865	Pitx2_Otx2	ENSMUST00000081987.5|Rpl36a-ps1|ENSMUSG00000060377.5|ribosomal protein L36A, pseudogene 1
mm39_v1_chr7_-_98305737_98305808	0.409345	Pitx2_Otx2	ENSMUST00000205911.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000038359.6|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206611.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206619.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor
mm39_v1_chr18_+_73996743_73996784	0.406706	Pitx2_Otx2	ENSMUST00000134847.2|Mro|ENSMUSG00000064036.16|maestro
mm39_v1_chr1_+_192890015_192890040	0.405985	Pitx2_Otx2	ENSMUST00000194677.6|Lamb3|ENSMUSG00000026639.19|laminin, beta 3	ENSMUST00000192322.6|Lamb3|ENSMUSG00000026639.19|laminin, beta 3
mm39_v1_chr11_-_58614840_58614840	0.405638	Pitx2_Otx2	ENSMUST00000214728.2|Olfr318|ENSMUSG00000108265.3|olfactory receptor 318
mm39_v1_chr7_-_102566717_102566743	0.405001	Pitx2_Otx2	ENSMUST00000214160.2|Olfr571|ENSMUSG00000043310.5|olfactory receptor 571	ENSMUST00000215773.2|Olfr571|ENSMUSG00000043310.5|olfactory receptor 571
mm39_v1_chr15_+_102234589_102234624	0.402477	Pitx2_Otx2	ENSMUST00000170627.8|Pfdn5|ENSMUSG00000001289.13|prefoldin 5
mm39_v1_chr14_+_53129643_53129643	0.401264	Pitx2_Otx2	ENSMUST00000199746.5|Trav9d-2|ENSMUSG00000094914.6|T cell receptor alpha  variable 9D-2	ENSMUST00000178824.2|Trav9d-2|ENSMUSG00000094914.6|T cell receptor alpha  variable 9D-2
mm39_v1_chr2_+_164782642_164782700	0.398599	Pitx2_Otx2	ENSMUST00000137626.2|Mmp9|ENSMUSG00000017737.3|matrix metallopeptidase 9
mm39_v1_chr15_+_101191099_101191118	0.395892	Pitx2_Otx2	ENSMUST00000191426.2|Smim41|ENSMUSG00000075408.6|small integral membrane protein 41
mm39_v1_chr11_+_96820091_96820175	0.392912	Pitx2_Otx2	ENSMUST00000054311.6|Prr15l|ENSMUSG00000047040.10|proline rich 15-like	ENSMUST00000107636.4|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chrX_+_56008685_56008685	0.392519	Pitx2_Otx2	ENSMUST00000096431.10|Adgrg4|ENSMUSG00000053852.12|adhesion G protein-coupled receptor G4
mm39_v1_chr3_-_108797306_108797329	0.391794	Pitx2_Otx2	ENSMUST00000102620.10|Fndc7|ENSMUSG00000045326.14|fibronectin type III domain containing 7
mm39_v1_chr6_+_146992877_146993036	0.389921	Pitx2_Otx2	ENSMUST00000036003.8|Klhl42|ENSMUSG00000040102.11|kelch-like 42
mm39_v1_chr19_-_47525437_47525558	0.389714	Pitx2_Otx2	ENSMUST00000182808.8|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000182714.2|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000049369.16|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit
mm39_v1_chrX_-_161671421_161671471	0.389146	Pitx2_Otx2	ENSMUST00000033723.4|Syap1|ENSMUSG00000031357.4|synapse associated protein 1
mm39_v1_chr11_+_75239259_75239386	0.389063	Pitx2_Otx2	ENSMUST00000044530.3|Smyd4|ENSMUSG00000018809.3|SET and MYND domain containing 4
mm39_v1_chr19_-_8775935_8775957	0.386998	Pitx2_Otx2	ENSMUST00000096261.5|Polr2g|ENSMUSG00000071662.5|polymerase (RNA) II (DNA directed) polypeptide G
mm39_v1_chr19_-_7272758_7272834	0.383129	Pitx2_Otx2	ENSMUST00000025921.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr17_-_46455082_46455146	0.382807	Pitx2_Otx2	ENSMUST00000024762.3|Rsph9|ENSMUSG00000023966.9|radial spoke head 9 homolog (Chlamydomonas)
mm39_v1_chr2_+_28386895_28386905	0.382742	Pitx2_Otx2	ENSMUST00000163121.8|Gbgt1|ENSMUSG00000026829.10|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
mm39_v1_chr8_-_127697812_127697851	0.382646	Pitx2_Otx2	ENSMUST00000212618.2|Rbm34|ENSMUSG00000033931.10|RNA binding motif protein 34	ENSMUST00000045994.8|Rbm34|ENSMUSG00000033931.10|RNA binding motif protein 34
mm39_v1_chr2_-_120561983_120562015	0.37926	Pitx2_Otx2	ENSMUST00000110701.8|Cdan1|ENSMUSG00000027284.17|congenital dyserythropoietic anemia, type I (human)	ENSMUST00000110700.2|Cdan1|ENSMUSG00000027284.17|congenital dyserythropoietic anemia, type I (human)
mm39_v1_chrX_-_8557083_8557083	0.377393	Pitx2_Otx2	ENSMUST00000185125.8|Ssxb8|ENSMUSG00000079703.13|synovial sarcoma, X member B8	ENSMUST00000101690.4|Ssxb8|ENSMUSG00000079703.13|synovial sarcoma, X member B8
mm39_v1_chr8_+_46463633_46463672	0.37625	Pitx2_Otx2	ENSMUST00000110381.9|Lrp2bp|ENSMUSG00000031637.14|Lrp2 binding protein
mm39_v1_chr6_-_57986187_57986187	0.375915	Pitx2_Otx2	ENSMUST00000049694.4|Vmn1r26|ENSMUSG00000048697.5|vomeronasal 1 receptor 26
mm39_v1_chr14_+_65835995_65835995	0.37412	Pitx2_Otx2	ENSMUST00000150897.8|Nuggc|ENSMUSG00000061356.14|nuclear GTPase, germinal center associated
mm39_v1_chr2_-_119371994_119371994	0.372402	Pitx2_Otx2	ENSMUST00000171024.8|Exd1|ENSMUSG00000048647.10|exonuclease 3'-5' domain containing 1
mm39_v1_chr11_-_86148379_86148416	0.372383	Pitx2_Otx2	ENSMUST00000132024.8|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2	ENSMUST00000139285.8|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2
mm39_v1_chr2_+_174257597_174257664	0.37202	Pitx2_Otx2	ENSMUST00000109075.8|Nelfcd|ENSMUSG00000016253.13|negative elongation factor complex member C/D, Th1l	ENSMUST00000016397.7|Nelfcd|ENSMUSG00000016253.13|negative elongation factor complex member C/D, Th1l
mm39_v1_chr5_+_124621190_124621221	0.369272	Pitx2_Otx2	ENSMUST00000031349.9|Snrnp35|ENSMUSG00000029402.9|small nuclear ribonucleoprotein 35 (U11/U12)
mm39_v1_chr2_-_4656870_4656958	0.368704	Pitx2_Otx2	ENSMUST00000192470.2|Prpf18|ENSMUSG00000039449.15|pre-mRNA processing factor 18	ENSMUST00000035721.14|Prpf18|ENSMUSG00000039449.15|pre-mRNA processing factor 18	ENSMUST00000152362.7|Prpf18|ENSMUSG00000039449.15|pre-mRNA processing factor 18
mm39_v1_chr16_-_89615225_89615244	0.366067	Pitx2_Otx2	ENSMUST00000164263.9|Tiam1|ENSMUSG00000002489.17|T cell lymphoma invasion and metastasis 1
mm39_v1_chr12_-_70160491_70160536	0.361915	Pitx2_Otx2	ENSMUST00000222237.2|Nin|ENSMUSG00000021068.18|ninein
mm39_v1_chr6_+_67816777_67816777	0.361124	Pitx2_Otx2	ENSMUST00000200578.5|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129	ENSMUST00000103308.3|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129
mm39_v1_chr8_+_123789681_123789727	0.358405	Pitx2_Otx2	ENSMUST00000142541.8|Spg7|ENSMUSG00000000738.19|SPG7, paraplegin matrix AAA peptidase subunit	ENSMUST00000125975.8|Spg7|ENSMUSG00000000738.19|SPG7, paraplegin matrix AAA peptidase subunit
mm39_v1_chr11_-_54846873_54846948	0.356601	Pitx2_Otx2	ENSMUST00000155316.2|Tnip1|ENSMUSG00000020400.18|TNFAIP3 interacting protein 1	ENSMUST00000108889.10|Tnip1|ENSMUSG00000020400.18|TNFAIP3 interacting protein 1	ENSMUST00000126703.8|Tnip1|ENSMUSG00000020400.18|TNFAIP3 interacting protein 1
mm39_v1_chr6_+_121222865_121222905	0.352939	Pitx2_Otx2	ENSMUST00000032198.11|Usp18|ENSMUSG00000030107.11|ubiquitin specific peptidase 18
mm39_v1_chr9_-_83323080_83323180	0.352374	Pitx2_Otx2	ENSMUST00000034791.15|Lca5|ENSMUSG00000032258.16|Leber congenital amaurosis 5 (human)	ENSMUST00000188548.7|Lca5|ENSMUSG00000032258.16|Leber congenital amaurosis 5 (human)	ENSMUST00000034793.15|Lca5|ENSMUSG00000032258.16|Leber congenital amaurosis 5 (human)
mm39_v1_chr18_+_4920513_4920584	0.351846	Pitx2_Otx2	ENSMUST00000126977.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr8_+_71125876_71125907	0.351722	Pitx2_Otx2	ENSMUST00000034311.15|Lsm4|ENSMUSG00000031848.16|LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr12_+_3944798_3944869	0.351221	Pitx2_Otx2	ENSMUST00000172879.2|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000174774.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr11_+_73130872_73130872	0.346309	Pitx2_Otx2	ENSMUST00000108470.8|Trpv1|ENSMUSG00000005952.16|transient receptor potential cation channel, subfamily V, member 1
mm39_v1_chr8_-_87611849_87611935	0.344196	Pitx2_Otx2	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr4_-_156340713_156340738	0.343526	Pitx2_Otx2	ENSMUST00000219393.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11
mm39_v1_chr6_+_29859685_29859709	0.339306	Pitx2_Otx2	ENSMUST00000134438.2|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr17_-_35340966_35341029	0.336815	Pitx2_Otx2	ENSMUST00000173915.3|Csnk2b|ENSMUSG00000024387.14|casein kinase 2, beta polypeptide	ENSMUST00000172765.9|Csnk2b|ENSMUSG00000024387.14|casein kinase 2, beta polypeptide
mm39_v1_chr15_-_84441977_84442075	0.336331	Pitx2_Otx2	ENSMUST00000069476.5|Rtl6|ENSMUSG00000055745.5|retrotransposon Gag like 6
mm39_v1_chr7_-_126522014_126522098	0.335617	Pitx2_Otx2	ENSMUST00000134134.3|Tmem219|ENSMUSG00000060538.15|transmembrane protein 219	ENSMUST00000119781.8|Tmem219|ENSMUSG00000060538.15|transmembrane protein 219	ENSMUST00000121612.4|Tmem219|ENSMUSG00000060538.15|transmembrane protein 219
mm39_v1_chr5_-_144947453_144947453	0.333165	Pitx2_Otx2	ENSMUST00000110673.8|Kpna7|ENSMUSG00000038770.18|karyopherin alpha 7 (importin alpha 8)
mm39_v1_chr10_-_129023288_129023288	0.332914	Pitx2_Otx2	ENSMUST00000072976.4|Olfr773|ENSMUSG00000096000.2|olfactory receptor 773
mm39_v1_chr7_-_101513300_101513363	0.332357	Pitx2_Otx2	ENSMUST00000106981.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr5_+_134961205_134961239	0.331932	Pitx2_Otx2	ENSMUST00000047196.14|Mettl27|ENSMUSG00000040557.15|methyltransferase like 27	ENSMUST00000111221.9|Mettl27|ENSMUSG00000040557.15|methyltransferase like 27	ENSMUST00000111219.8|Mettl27|ENSMUSG00000040557.15|methyltransferase like 27	ENSMUST00000068617.12|Mettl27|ENSMUSG00000040557.15|methyltransferase like 27
mm39_v1_chr11_+_101151394_101151451	0.330567	Pitx2_Otx2	ENSMUST00000103108.8|Wnk4|ENSMUSG00000035112.18|WNK lysine deficient protein kinase 4
mm39_v1_chr2_-_37007795_37007922	0.330437	Pitx2_Otx2	ENSMUST00000213817.2|Olfr362|ENSMUSG00000075377.3|olfactory receptor 362	ENSMUST00000215927.2|Olfr362|ENSMUSG00000075377.3|olfactory receptor 362
mm39_v1_chr17_-_71285503_71285552	0.329626	Pitx2_Otx2	ENSMUST00000233004.2|Myl12b|ENSMUSG00000034868.10|myosin, light chain 12B, regulatory
mm39_v1_chr5_+_38417710_38417745	0.329062	Pitx2_Otx2	ENSMUST00000119047.8|Tmem128|ENSMUSG00000067365.12|transmembrane protein 128
mm39_v1_chr5_-_137608726_137608751	0.328872	Pitx2_Otx2	ENSMUST00000197912.5|Pcolce|ENSMUSG00000029718.15|procollagen C-endopeptidase enhancer protein
mm39_v1_chr7_+_40933751_40933751	0.328136	Pitx2_Otx2	ENSMUST00000097044.3|Gm5592|ENSMUSG00000072259.4|predicted gene 5592
mm39_v1_chr19_-_8775817_8775837	0.325833	Pitx2_Otx2	ENSMUST00000235964.2|Polr2g|ENSMUSG00000071662.5|polymerase (RNA) II (DNA directed) polypeptide G
mm39_v1_chr10_-_118179160_118179160	0.324691	Pitx2_Otx2	ENSMUST00000218329.2|Gm9046|ENSMUSG00000112781.2|predicted gene 9046
mm39_v1_chr6_+_48881913_48881926	0.324204	Pitx2_Otx2	ENSMUST00000162948.7|Aoc1|ENSMUSG00000029811.15|amine oxidase, copper-containing 1	ENSMUST00000167529.3|Aoc1|ENSMUSG00000029811.15|amine oxidase, copper-containing 1
mm39_v1_chr15_+_12117899_12118008	0.322595	Pitx2_Otx2	ENSMUST00000122941.8|Zfr|ENSMUSG00000022201.17|zinc finger RNA binding protein
mm39_v1_chr6_-_142268692_142268733	0.321254	Pitx2_Otx2	ENSMUST00000081380.10|Slco1a5|ENSMUSG00000063975.14|solute carrier organic anion transporter family, member 1a5
mm39_v1_chr11_-_69572896_69572910	0.320923	Pitx2_Otx2	ENSMUST00000066760.8|Senp3|ENSMUSG00000005204.13|SUMO/sentrin specific peptidase 3
mm39_v1_chr11_-_116164928_116164968	0.31836	Pitx2_Otx2	ENSMUST00000106425.4|Srp68|ENSMUSG00000020780.16|signal recognition particle 68
mm39_v1_chr19_-_32188413_32188436	0.318141	Pitx2_Otx2	ENSMUST00000151289.9|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr7_-_29898236_29898269	0.316032	Pitx2_Otx2	ENSMUST00000001845.13|Capns1|ENSMUSG00000001794.14|calpain, small subunit 1
mm39_v1_chr3_+_94269745_94269745	0.314916	Pitx2_Otx2	ENSMUST00000169433.3|C2cd4d|ENSMUSG00000091648.3|C2 calcium-dependent domain containing 4D
mm39_v1_chr17_+_26342474_26342530	0.313664	Pitx2_Otx2	ENSMUST00000025014.10|Mrpl28|ENSMUSG00000024181.10|mitochondrial ribosomal protein L28	ENSMUST00000236166.2|Mrpl28|ENSMUSG00000024181.10|mitochondrial ribosomal protein L28	ENSMUST00000127647.3|Mrpl28|ENSMUSG00000024181.10|mitochondrial ribosomal protein L28
mm39_v1_chr17_+_26895344_26895375	0.313041	Pitx2_Otx2	ENSMUST00000015719.16|Atp6v0e|ENSMUSG00000015575.16|ATPase, H+ transporting, lysosomal V0 subunit E
mm39_v1_chr17_-_33687660_33687660	0.312755	Pitx2_Otx2	ENSMUST00000234517.3|Gm4125|ENSMUSG00000117495.3|predicted gene 4125
mm39_v1_chr16_-_13977084_13977152	0.310422	Pitx2_Otx2	ENSMUST00000090300.6|Marf1|ENSMUSG00000060657.9|meiosis regulator and mRNA stability 1
mm39_v1_chr2_-_172300516_172300516	0.31016	Pitx2_Otx2	ENSMUST00000099060.2|Gcnt7|ENSMUSG00000074569.5|glucosaminyl (N-acetyl) transferase family member 7
mm39_v1_chr2_+_129642371_129642493	0.309022	Pitx2_Otx2	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr5_+_52940391_52940458	0.306621	Pitx2_Otx2	ENSMUST00000031077.13|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000113904.9|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000199840.2|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4
mm39_v1_chr1_+_86510614_86510660	0.30563	Pitx2_Otx2	ENSMUST00000121534.8|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B	ENSMUST00000149542.2|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B
mm39_v1_chr14_+_44194526_44194526	0.305416	Pitx2_Otx2	ENSMUST00000066719.6|Ang5|ENSMUSG00000053961.8|angiogenin, ribonuclease A family, member 5
mm39_v1_chr6_-_42442130_42442130	0.303888	Pitx2_Otx2	ENSMUST00000216650.2|Olfr458|ENSMUSG00000068574.3|olfactory receptor 458
mm39_v1_chr8_-_71349927_71350067	0.302896	Pitx2_Otx2	ENSMUST00000212709.2|Rpl18a|ENSMUSG00000045128.10|ribosomal protein L18A	ENSMUST00000212796.2|Rpl18a|ENSMUSG00000045128.10|ribosomal protein L18A	ENSMUST00000212378.2|Rpl18a|ENSMUSG00000045128.10|ribosomal protein L18A	ENSMUST00000054220.10|Rpl18a|ENSMUSG00000045128.10|ribosomal protein L18A	ENSMUST00000212494.2|Rpl18a|ENSMUSG00000045128.10|ribosomal protein L18A
mm39_v1_chr10_+_88295515_88295532	0.302796	Pitx2_Otx2	ENSMUST00000125612.2|Sycp3|ENSMUSG00000020059.10|synaptonemal complex protein 3
mm39_v1_chr7_+_19251763_19251842	0.302446	Pitx2_Otx2	ENSMUST00000207576.2|Nkpd1|ENSMUSG00000060621.7|NTPase, KAP family P-loop domain containing 1
mm39_v1_chr5_+_140317615_140317709	0.29973	Pitx2_Otx2	ENSMUST00000071881.10|Nudt1|ENSMUSG00000036639.13|nudix (nucleoside diphosphate linked moiety X)-type motif 1	ENSMUST00000050205.12|Nudt1|ENSMUSG00000036639.13|nudix (nucleoside diphosphate linked moiety X)-type motif 1	ENSMUST00000110827.8|Nudt1|ENSMUSG00000036639.13|nudix (nucleoside diphosphate linked moiety X)-type motif 1
mm39_v1_chr2_-_85349362_85349377	0.299683	Pitx2_Otx2	ENSMUST00000099923.2|Fads2b|ENSMUSG00000075217.2|fatty acid desaturase 2B
mm39_v1_chr2_-_37320848_37320931	0.298585	Pitx2_Otx2	ENSMUST00000053098.6|Zbtb6|ENSMUSG00000066798.4|zinc finger and BTB domain containing 6
mm39_v1_chr8_+_72063642_72063801	0.297914	Pitx2_Otx2	ENSMUST00000047903.10|Colgalt1|ENSMUSG00000034807.10|collagen beta(1-O)galactosyltransferase 1
mm39_v1_chr15_+_102368510_102368560	0.294532	Pitx2_Otx2	ENSMUST00000164688.2|Prr13|ENSMUSG00000023048.14|proline rich 13
mm39_v1_chr14_+_122116002_122116141	0.294446	Pitx2_Otx2	ENSMUST00000039803.7|Ubac2|ENSMUSG00000041765.7|ubiquitin associated domain containing 2
mm39_v1_chr6_+_122803624_122803640	0.293226	Pitx2_Otx2	ENSMUST00000203075.2|Foxj2|ENSMUSG00000003154.16|forkhead box J2
mm39_v1_chr11_+_116547932_116547943	0.292837	Pitx2_Otx2	ENSMUST00000116318.3|Prcd|ENSMUSG00000075410.14|photoreceptor disc component
mm39_v1_chr7_+_132532841_132532871	0.292748	Pitx2_Otx2	ENSMUST00000106157.8|Zranb1|ENSMUSG00000030967.16|zinc finger, RAN-binding domain containing 1
mm39_v1_chr5_+_114427227_114427319	0.292064	Pitx2_Otx2	ENSMUST00000169347.6|Myo1h|ENSMUSG00000066952.12|myosin 1H
mm39_v1_chr8_-_70962972_70963073	0.291192	Pitx2_Otx2	ENSMUST00000140679.8|Uba52|ENSMUSG00000090137.9|ubiquitin A-52 residue ribosomal protein fusion product 1	ENSMUST00000129909.8|Uba52|ENSMUSG00000090137.9|ubiquitin A-52 residue ribosomal protein fusion product 1	ENSMUST00000081940.11|Uba52|ENSMUSG00000090137.9|ubiquitin A-52 residue ribosomal protein fusion product 1
mm39_v1_chr1_-_159981132_159981162	0.290825	Pitx2_Otx2	ENSMUST00000039178.12|Tnn|ENSMUSG00000026725.18|tenascin N
mm39_v1_chr6_+_136785230_136785346	0.289243	Pitx2_Otx2	ENSMUST00000074556.7|H2aj|ENSMUSG00000060032.7|H2J.A histone	ENSMUST00000203982.2|H2aj|ENSMUSG00000060032.7|H2J.A histone
mm39_v1_chr9_-_123507937_123507950	0.286778	Pitx2_Otx2	ENSMUST00000040960.13|Slc6a20a|ENSMUSG00000036814.14|solute carrier family 6 (neurotransmitter transporter), member 20A
mm39_v1_chr5_+_135382149_135382150	0.286164	Pitx2_Otx2	ENSMUST00000111180.9|Trim50|ENSMUSG00000053388.11|tripartite motif-containing 50	ENSMUST00000065785.4|Trim50|ENSMUSG00000053388.11|tripartite motif-containing 50
mm39_v1_chr16_+_59227695_59227695	0.285866	Pitx2_Otx2	ENSMUST00000114341.4|Gabrr3|ENSMUSG00000074991.6|gamma-aminobutyric acid (GABA) receptor, rho 3
mm39_v1_chr11_-_29197222_29197409	0.284974	Pitx2_Otx2	ENSMUST00000020754.10|Cfap36|ENSMUSG00000020462.15|cilia and flagella associated protein 36
mm39_v1_chr8_+_105688344_105688417	0.282705	Pitx2_Otx2	ENSMUST00000043183.8|Ces2g|ENSMUSG00000031877.10|carboxylesterase 2G
mm39_v1_chr13_-_34119816_34119858	0.277694	Pitx2_Otx2	ENSMUST00000168350.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a	ENSMUST00000167260.8|Serpinb6a|ENSMUSG00000060147.16|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm39_v1_chr13_+_77856801_77856857	0.27662	Pitx2_Otx2	ENSMUST00000163257.9|Fam172a|ENSMUSG00000064138.15|family with sequence similarity 172, member A	ENSMUST00000091459.12|Fam172a|ENSMUSG00000064138.15|family with sequence similarity 172, member A	ENSMUST00000099358.5|Fam172a|ENSMUSG00000064138.15|family with sequence similarity 172, member A	ENSMUST00000225623.2|Fam172a|ENSMUSG00000064138.15|family with sequence similarity 172, member A	ENSMUST00000224908.2|Fam172a|ENSMUSG00000064138.15|family with sequence similarity 172, member A
mm39_v1_chr7_-_5152669_5152669	0.276457	Pitx2_Otx2	ENSMUST00000236378.2|Vmn1r55|ENSMUSG00000118215.2|vomeronasal 1 receptor 55
mm39_v1_chr7_+_140436870_140436870	0.2755	Pitx2_Otx2	ENSMUST00000026558.7|Ric8a|ENSMUSG00000025485.14|RIC8 guanine nucleotide exchange factor A
mm39_v1_chr5_-_36905983_36906039	0.275461	Pitx2_Otx2	ENSMUST00000071949.5|Bloc1s4|ENSMUSG00000060708.5|biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
mm39_v1_chr2_-_152306532_152306546	0.27542	Pitx2_Otx2	ENSMUST00000099206.3|Defb23|ENSMUSG00000074681.3|defensin beta 23
mm39_v1_chr3_-_152931392_152931420	0.274977	Pitx2_Otx2	ENSMUST00000199707.2|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm39_v1_chr10_+_128061699_128061715	0.273126	Pitx2_Otx2	ENSMUST00000026455.8|Mip|ENSMUSG00000025389.8|major intrinsic protein of lens fiber
mm39_v1_chr4_-_123466853_123466881	0.272735	Pitx2_Otx2	ENSMUST00000238555.2|Macf1|ENSMUSG00000028649.22|microtubule-actin crosslinking factor 1
mm39_v1_chr7_+_12615091_12615132	0.272255	Pitx2_Otx2	ENSMUST00000144578.2|Zfp128|ENSMUSG00000060397.7|zinc finger protein 128
mm39_v1_chr10_+_80441855_80441855	0.272242	Pitx2_Otx2	ENSMUST00000178231.2|Gm49322|ENSMUSG00000035370.10|predicted gene, 49322
mm39_v1_chr9_+_98746796_98746856	0.268846	Pitx2_Otx2	ENSMUST00000167951.3|Prr23a3|ENSMUSG00000090470.3|proline rich 23A, member 3
mm39_v1_chr13_-_73476561_73476661	0.268289	Pitx2_Otx2	ENSMUST00000222930.2|Ndufs6|ENSMUSG00000021606.9|NADH:ubiquinone oxidoreductase core subunit S6	ENSMUST00000223293.2|Ndufs6|ENSMUSG00000021606.9|NADH:ubiquinone oxidoreductase core subunit S6	ENSMUST00000022097.6|Ndufs6|ENSMUSG00000021606.9|NADH:ubiquinone oxidoreductase core subunit S6
mm39_v1_chr13_-_38842967_38843034	0.267128	Pitx2_Otx2	ENSMUST00000001757.9|Eef1e1|ENSMUSG00000001707.9|eukaryotic translation elongation factor 1 epsilon 1
mm39_v1_chr12_+_104998895_104998964	0.265577	Pitx2_Otx2	ENSMUST00000223244.2|Glrx5|ENSMUSG00000021102.5|glutaredoxin 5	ENSMUST00000021522.5|Glrx5|ENSMUSG00000021102.5|glutaredoxin 5
mm39_v1_chr9_-_20809888_20809927	0.264966	Pitx2_Otx2	ENSMUST00000004206.10|Eif3g|ENSMUSG00000070319.7|eukaryotic translation initiation factor 3, subunit G
mm39_v1_chr10_+_19497740_19497752	0.264638	Pitx2_Otx2	ENSMUST00000036564.8|Il22ra2|ENSMUSG00000039760.9|interleukin 22 receptor, alpha 2
mm39_v1_chr12_+_3945467_3945593	0.263733	Pitx2_Otx2	ENSMUST00000172749.2|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr6_+_43193817_43193817	0.263168	Pitx2_Otx2	ENSMUST00000076752.4|Olfr434|ENSMUSG00000059411.7|olfactory receptor 434
mm39_v1_chr14_-_68771138_68771205	0.258459	Pitx2_Otx2	ENSMUST00000022640.8|Adam7|ENSMUSG00000022056.10|a disintegrin and metallopeptidase domain 7
mm39_v1_chr11_-_116165024_116165043	0.257782	Pitx2_Otx2	ENSMUST00000021133.16|Srp68|ENSMUSG00000020780.16|signal recognition particle 68
mm39_v1_chr13_-_67417132_67417195	0.257012	Pitx2_Otx2	ENSMUST00000045969.8|Zfp458|ENSMUSG00000055480.8|zinc finger protein 458
mm39_v1_chr5_+_67125759_67125790	0.252641	Pitx2_Otx2	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr2_-_25873068_25873167	0.252368	Pitx2_Otx2	ENSMUST00000127823.2|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000134882.8|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1
mm39_v1_chr2_-_104546724_104546724	0.251499	Pitx2_Otx2	ENSMUST00000099659.3|Pin1rt1|ENSMUSG00000074997.4|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1
mm39_v1_chr7_+_16726633_16726633	0.249927	Pitx2_Otx2	ENSMUST00000094805.5|Ccdc8|ENSMUSG00000041117.9|coiled-coil domain containing 8
mm39_v1_chr2_+_88505972_88505982	0.24952	Pitx2_Otx2	ENSMUST00000216767.2|Olfr1193|ENSMUSG00000060827.3|olfactory receptor 1193	ENSMUST00000213893.2|Olfr1193|ENSMUSG00000060827.3|olfactory receptor 1193
mm39_v1_chr5_+_68099012_68099012	0.247922	Pitx2_Otx2	ENSMUST00000177891.2|Gm5108|ENSMUSG00000094719.5|predicted gene 5108
mm39_v1_chr11_-_82799186_82799237	0.24465	Pitx2_Otx2	ENSMUST00000103213.10|Nle1|ENSMUSG00000020692.15|notchless homolog 1
mm39_v1_chr3_+_107137924_107137933	0.244354	Pitx2_Otx2	ENSMUST00000179399.3|A630076J17Rik|ENSMUSG00000094613.3|RIKEN cDNA A630076J17 gene
mm39_v1_chr9_+_72946994_72947027	0.241542	Pitx2_Otx2	ENSMUST00000184126.3|Pigbos1|ENSMUSG00000098332.3|Pigb opposite strand 1
mm39_v1_chr4_+_101407608_101407791	0.238118	Pitx2_Otx2	ENSMUST00000094953.11|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6	ENSMUST00000106933.2|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr13_-_54616618_54616676	0.234529	Pitx2_Otx2	ENSMUST00000026990.6|Thoc3|ENSMUSG00000025872.6|THO complex 3
mm39_v1_chr6_-_57372768_57372768	0.233603	Pitx2_Otx2	ENSMUST00000228574.2|Vmn1r18|ENSMUSG00000091382.3|vomeronasal 1 receptor 18
mm39_v1_chr19_+_6385009_6385100	0.232447	Pitx2_Otx2	ENSMUST00000113502.10|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000113504.10|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000079327.12|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000056391.15|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000113501.8|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000237909.2|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000113500.8|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1	ENSMUST00000166909.2|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1
mm39_v1_chr17_+_37978659_37978659	0.228993	Pitx2_Otx2	ENSMUST00000216551.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr3_-_97329336_97329336	0.228817	Pitx2_Otx2	ENSMUST00000199297.4|Olfr1402|ENSMUSG00000051392.6|olfactory receptor 1402
mm39_v1_chr8_-_80126120_80126168	0.228758	Pitx2_Otx2	ENSMUST00000066091.14|Smad1|ENSMUSG00000031681.17|SMAD family member 1	ENSMUST00000109885.8|Smad1|ENSMUSG00000031681.17|SMAD family member 1
mm39_v1_chr6_+_113600920_113600999	0.227829	Pitx2_Otx2	ENSMUST00000035673.8|Vhl|ENSMUSG00000033933.14|von Hippel-Lindau tumor suppressor
mm39_v1_chr13_+_9002896_9002903	0.227762	Pitx2_Otx2	ENSMUST00000038598.3|Idi2|ENSMUSG00000033520.3|isopentenyl-diphosphate delta isomerase 2
mm39_v1_chr7_+_35148461_35148474	0.226223	Pitx2_Otx2	ENSMUST00000118969.8|Slc7a9|ENSMUSG00000030492.17|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm39_v1_chrX_-_88976458_88976458	0.225811	Pitx2_Otx2	ENSMUST00000088146.3|4930415L06Rik|ENSMUSG00000035387.6|RIKEN cDNA 4930415L06 gene
mm39_v1_chr9_+_38398381_38398381	0.225455	Pitx2_Otx2	ENSMUST00000214344.3|Olfr906|ENSMUSG00000039962.4|olfactory receptor 906
mm39_v1_chr4_+_146094260_146094260	0.224887	Pitx2_Otx2	ENSMUST00000092750.12|Zfp600|ENSMUSG00000066007.16|zinc finger protein 600
mm39_v1_chr6_+_142291374_142291419	0.222726	Pitx2_Otx2	ENSMUST00000041852.8|Pyroxd1|ENSMUSG00000041671.14|pyridine nucleotide-disulphide oxidoreductase domain 1
mm39_v1_chr7_+_44805280_44805411	0.222076	Pitx2_Otx2	ENSMUST00000107811.4|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1	ENSMUST00000211414.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1
mm39_v1_chr19_+_58717319_58717424	0.220489	Pitx2_Otx2	ENSMUST00000048644.6|Pnliprp1|ENSMUSG00000042179.7|pancreatic lipase related protein 1	ENSMUST00000236445.2|Pnliprp1|ENSMUSG00000042179.7|pancreatic lipase related protein 1
mm39_v1_chr1_+_99700490_99700490	0.217129	Pitx2_Otx2	ENSMUST00000086738.10|Cntnap5b|ENSMUSG00000067028.12|contactin associated protein-like 5B
mm39_v1_chr2_-_32178034_32178087	0.216288	Pitx2_Otx2	ENSMUST00000183946.8|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)	ENSMUST00000113400.3|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)	ENSMUST00000050410.11|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)
mm39_v1_chr7_+_5017414_5017453	0.216232	Pitx2_Otx2	ENSMUST00000207901.2|Zfp524|ENSMUSG00000051184.8|zinc finger protein 524
mm39_v1_chr8_+_71819854_71819882	0.214989	Pitx2_Otx2	ENSMUST00000019169.8|Use1|ENSMUSG00000002395.15|unconventional SNARE in the ER 1 homolog (S. cerevisiae)
mm39_v1_chr17_-_57318271_57318326	0.214326	Pitx2_Otx2	ENSMUST00000002733.7|Gtf2f1|ENSMUSG00000002658.10|general transcription factor IIF, polypeptide 1
mm39_v1_chr19_+_23736205_23736274	0.213759	Pitx2_Otx2	ENSMUST00000025830.9|Apba1|ENSMUSG00000024897.10|amyloid beta (A4) precursor protein binding, family  A, member 1
mm39_v1_chr11_-_62283431_62283485	0.213252	Pitx2_Otx2	ENSMUST00000151498.9|Ncor1|ENSMUSG00000018501.18|nuclear receptor co-repressor 1
mm39_v1_chr2_+_29825427_29825512	0.212791	Pitx2_Otx2	ENSMUST00000019859.9|Gle1|ENSMUSG00000019715.15|GLE1 RNA export mediator (yeast)
mm39_v1_chr11_+_53611611_53611627	0.211557	Pitx2_Otx2	ENSMUST00000048605.3|Il5|ENSMUSG00000036117.3|interleukin 5
mm39_v1_chr4_+_140941259_140941309	0.210374	Pitx2_Otx2	ENSMUST00000097813.3|Cplane2|ENSMUSG00000073733.5|ciliogenesis and planar polarity effector 2
mm39_v1_chr1_-_74932266_74932302	0.210212	Pitx2_Otx2	ENSMUST00000006721.3|Cryba2|ENSMUSG00000006546.4|crystallin, beta A2
mm39_v1_chr7_-_16121716_16121769	0.209851	Pitx2_Otx2	ENSMUST00000211741.2|Sae1|ENSMUSG00000052833.10|SUMO1 activating enzyme subunit 1	ENSMUST00000210999.2|Sae1|ENSMUSG00000052833.10|SUMO1 activating enzyme subunit 1
mm39_v1_chr11_+_78152543_78152629	0.208757	Pitx2_Otx2	ENSMUST00000010421.7|2610507B11Rik|ENSMUSG00000010277.8|RIKEN cDNA 2610507B11 gene
mm39_v1_chr14_+_31887739_31887757	0.206856	Pitx2_Otx2	ENSMUST00000111994.10|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000168114.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000168034.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4
mm39_v1_chr11_+_76792977_76792993	0.206551	Pitx2_Otx2	ENSMUST00000102495.8|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chr15_+_76763501_76763634	0.205109	Pitx2_Otx2	ENSMUST00000230106.2|Zfp7|ENSMUSG00000033669.9|zinc finger protein 7	ENSMUST00000229831.2|Zfp7|ENSMUSG00000033669.9|zinc finger protein 7	ENSMUST00000229990.2|Zfp7|ENSMUSG00000033669.9|zinc finger protein 7	ENSMUST00000230214.2|Gm49527|ENSMUSG00000116024.2|predicted gene, 49527
mm39_v1_chr10_-_118184584_118184584	0.20209	Pitx2_Otx2	ENSMUST00000177744.3|Gm9048|ENSMUSG00000112495.2|predicted gene 9048
mm39_v1_chr13_-_90237179_90237211	0.201809	Pitx2_Otx2	ENSMUST00000161396.2|Xrcc4|ENSMUSG00000021615.14|X-ray repair complementing defective repair in Chinese hamster cells 4
mm39_v1_chr19_+_12824046_12824145	0.200678	Pitx2_Otx2	ENSMUST00000189517.2|Gm5244|ENSMUSG00000091014.4|predicted pseudogene 5244
mm39_v1_chr7_-_113853894_113853974	0.193217	Pitx2_Otx2	ENSMUST00000033012.9|Copb1|ENSMUSG00000030754.10|coatomer protein complex, subunit beta 1
mm39_v1_chr12_-_114217671_114217724	0.193175	Pitx2_Otx2	ENSMUST00000193408.2|Ighv3-4|ENSMUSG00000103939.2|immunoglobulin heavy variable V3-4
mm39_v1_chr5_+_130058119_130058181	0.192143	Pitx2_Otx2	ENSMUST00000026608.11|Crcp|ENSMUSG00000025532.14|calcitonin gene-related peptide-receptor component protein	ENSMUST00000202163.4|Crcp|ENSMUSG00000025532.14|calcitonin gene-related peptide-receptor component protein	ENSMUST00000202756.2|Crcp|ENSMUSG00000025532.14|calcitonin gene-related peptide-receptor component protein
mm39_v1_chr17_-_20701593_20701593	0.191746	Pitx2_Otx2	ENSMUST00000167314.3|Vmn2r108|ENSMUSG00000091805.3|vomeronasal 2, receptor 108	ENSMUST00000232850.2|Vmn2r108|ENSMUSG00000091805.3|vomeronasal 2, receptor 108	ENSMUST00000233382.2|Vmn2r108|ENSMUSG00000091805.3|vomeronasal 2, receptor 108	ENSMUST00000233572.2|Vmn2r108|ENSMUSG00000091805.3|vomeronasal 2, receptor 108	ENSMUST00000233830.2|Vmn2r108|ENSMUSG00000091805.3|vomeronasal 2, receptor 108
mm39_v1_chr14_+_52804637_52804750	0.19053	Pitx2_Otx2	ENSMUST00000196939.2|Trav2|ENSMUSG00000076759.4|T cell receptor alpha variable 2	ENSMUST00000103568.3|Trav2|ENSMUSG00000076759.4|T cell receptor alpha variable 2
mm39_v1_chr7_-_44803946_44804008	0.189259	Pitx2_Otx2	ENSMUST00000209963.2|Aldh16a1|ENSMUSG00000007833.16|aldehyde dehydrogenase 16 family, member A1	ENSMUST00000107815.4|Aldh16a1|ENSMUSG00000007833.16|aldehyde dehydrogenase 16 family, member A1
mm39_v1_chr2_-_180854915_180854978	0.189206	Pitx2_Otx2	ENSMUST00000016498.5|Srms|ENSMUSG00000027579.7|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
mm39_v1_chrX_+_162692126_162692167	0.188968	Pitx2_Otx2	ENSMUST00000033734.14|Ap1s2|ENSMUSG00000031367.16|adaptor-related protein complex 1, sigma 2 subunit	ENSMUST00000112294.9|Ap1s2|ENSMUSG00000031367.16|adaptor-related protein complex 1, sigma 2 subunit
mm39_v1_chr6_+_131520725_131520725	0.186515	Pitx2_Otx2	ENSMUST00000161385.5|5430401F13Rik|ENSMUSG00000094113.8|RIKEN cDNA 5430401F13 gene
mm39_v1_chr7_-_126613707_126613793	0.186327	Pitx2_Otx2	ENSMUST00000165096.9|Mvp|ENSMUSG00000030681.19|major vault protein
mm39_v1_chr7_-_103188439_103188439	0.184031	Pitx2_Otx2	ENSMUST00000104879.2|Olfr612|ENSMUSG00000094119.4|olfactory receptor 612
mm39_v1_chr14_-_30740946_30740999	0.183749	Pitx2_Otx2	ENSMUST00000228341.2|Gnl3|ENSMUSG00000042354.8|guanine nucleotide binding protein-like 3 (nucleolar)
mm39_v1_chr9_+_20492593_20492630	0.183277	Pitx2_Otx2	ENSMUST00000115557.10|Zfp846|ENSMUSG00000058192.17|zinc finger protein 846
mm39_v1_chr7_-_44203319_44203392	0.180512	Pitx2_Otx2	ENSMUST00000208366.2|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000207737.2|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000107910.8|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000167197.8|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000128600.3|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000107911.8|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2	ENSMUST00000073488.12|Nr1h2|ENSMUSG00000060601.14|nuclear receptor subfamily 1, group H, member 2
mm39_v1_chr4_-_40757814_40757923	0.179986	Pitx2_Otx2	ENSMUST00000030117.5|Smu1|ENSMUSG00000028409.12|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm39_v1_chr8_+_61446221_61446299	0.178749	Pitx2_Otx2	ENSMUST00000120689.8|Nek1|ENSMUSG00000031644.20|NIMA (never in mitosis gene a)-related expressed kinase 1	ENSMUST00000034065.14|Nek1|ENSMUSG00000031644.20|NIMA (never in mitosis gene a)-related expressed kinase 1	ENSMUST00000211256.2|Nek1|ENSMUSG00000031644.20|NIMA (never in mitosis gene a)-related expressed kinase 1	ENSMUST00000211672.2|Nek1|ENSMUSG00000031644.20|NIMA (never in mitosis gene a)-related expressed kinase 1
mm39_v1_chrX_+_8669930_8669930	0.17545	Pitx2_Otx2	ENSMUST00000089370.6|Ssxb5|ENSMUSG00000071816.6|synovial sarcoma, X member B5
mm39_v1_chr9_+_109891628_109891660	0.175209	Pitx2_Otx2	ENSMUST00000163979.7|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr5_-_24597009_24597141	0.175113	Pitx2_Otx2	ENSMUST00000059401.7|Atg9b|ENSMUSG00000038295.15|autophagy related 9B
mm39_v1_chr2_+_126850613_126850680	0.175067	Pitx2_Otx2	ENSMUST00000110394.8|Ap4e1|ENSMUSG00000001998.16|adaptor-related protein complex AP-4, epsilon 1	ENSMUST00000002063.15|Ap4e1|ENSMUSG00000001998.16|adaptor-related protein complex AP-4, epsilon 1
mm39_v1_chr10_+_129691236_129691236	0.172269	Pitx2_Otx2	ENSMUST00000204622.3|Olfr813|ENSMUSG00000052818.6|olfactory receptor 813
mm39_v1_chr1_-_75196496_75196535	0.172236	Pitx2_Otx2	ENSMUST00000186758.7|Tuba4a|ENSMUSG00000026202.14|tubulin, alpha 4A
mm39_v1_chr16_+_58967409_58967409	0.171104	Pitx2_Otx2	ENSMUST00000216957.3|Olfr195|ENSMUSG00000062608.6|olfactory receptor 195
mm39_v1_chr2_+_156928962_156928975	0.170498	Pitx2_Otx2	ENSMUST00000166140.8|Tldc2|ENSMUSG00000074628.10|TBC/LysM associated domain containing 2
mm39_v1_chr4_-_40239778_40239832	0.166893	Pitx2_Otx2	ENSMUST00000037907.13|Ddx58|ENSMUSG00000040296.16|DEAD/H box helicase 58
mm39_v1_chr2_+_180961599_180961756	0.166448	Pitx2_Otx2	ENSMUST00000153112.2|Rtel1|ENSMUSG00000038685.19|regulator of telomere elongation helicase 1
mm39_v1_chr18_-_43571345_43571371	0.164779	Pitx2_Otx2	ENSMUST00000121805.9|Dpysl3|ENSMUSG00000024501.21|dihydropyrimidinase-like 3
mm39_v1_chr15_+_81548090_81548158	0.164762	Pitx2_Otx2	ENSMUST00000023029.15|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit	ENSMUST00000174229.8|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit	ENSMUST00000172748.8|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit
mm39_v1_chr8_-_112718888_112718934	0.164706	Pitx2_Otx2	ENSMUST00000034427.12|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1	ENSMUST00000139820.8|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1
mm39_v1_chr5_+_67125902_67125920	0.163112	Pitx2_Otx2	ENSMUST00000127184.8|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr3_-_86049988_86050009	0.162979	Pitx2_Otx2	ENSMUST00000029722.7|Rps3a1|ENSMUSG00000028081.7|ribosomal protein S3A1
mm39_v1_chr6_+_42326980_42327009	0.16228	Pitx2_Otx2	ENSMUST00000203849.2|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr4_+_148642879_148642926	0.1617	Pitx2_Otx2	ENSMUST00000017408.14|Exosc10|ENSMUSG00000017264.17|exosome component 10	ENSMUST00000076022.7|Exosc10|ENSMUSG00000017264.17|exosome component 10
mm39_v1_chr8_-_27618643_27618715	0.161624	Pitx2_Otx2	ENSMUST00000033877.6|Brf2|ENSMUSG00000031487.6|BRF2, RNA polymerase III transcription initiation factor 50kDa subunit
mm39_v1_chr8_-_84791766_84791766	0.159966	Pitx2_Otx2	ENSMUST00000098592.3|Gm10643|ENSMUSG00000074215.3|predicted gene 10643
mm39_v1_chr3_+_135191366_135191430	0.159284	Pitx2_Otx2	ENSMUST00000029814.10|Manba|ENSMUSG00000028164.16|mannosidase, beta A, lysosomal
mm39_v1_chr18_-_34784746_34784794	0.158741	Pitx2_Otx2	ENSMUST00000025228.12|Cdc23|ENSMUSG00000024370.18|CDC23 cell division cycle 23	ENSMUST00000133181.2|Cdc23|ENSMUSG00000024370.18|CDC23 cell division cycle 23
mm39_v1_chr14_-_56472102_56472117	0.156641	Pitx2_Otx2	ENSMUST00000015585.4|Gzmc|ENSMUSG00000079186.4|granzyme C
mm39_v1_chr6_+_38358404_38358463	0.156426	Pitx2_Otx2	ENSMUST00000162554.8|Ttc26|ENSMUSG00000056832.15|tetratricopeptide repeat domain 26	ENSMUST00000161751.8|Ttc26|ENSMUSG00000056832.15|tetratricopeptide repeat domain 26
mm39_v1_chr18_+_31937129_31937229	0.155844	Pitx2_Otx2	ENSMUST00000082319.15|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000234957.2|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000025264.8|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000234344.2|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33
mm39_v1_chr6_-_72212547_72212569	0.154998	Pitx2_Otx2	ENSMUST00000042646.8|Atoh8|ENSMUSG00000037621.9|atonal bHLH transcription factor 8
mm39_v1_chr1_-_95595245_95595266	0.15489	Pitx2_Otx2	ENSMUST00000189556.2|St8sia4|ENSMUSG00000040710.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm39_v1_chr19_+_8870362_8870416	0.1521	Pitx2_Otx2	ENSMUST00000096249.7|Ints5|ENSMUSG00000071652.9|integrator complex subunit 5
mm39_v1_chr5_-_137015683_137015755	0.150929	Pitx2_Otx2	ENSMUST00000034953.14|Znhit1|ENSMUSG00000059518.15|zinc finger, HIT domain containing 1	ENSMUST00000085941.12|Znhit1|ENSMUSG00000059518.15|zinc finger, HIT domain containing 1
mm39_v1_chr17_+_25115461_25115524	0.148774	Pitx2_Otx2	ENSMUST00000024978.7|Nme3|ENSMUSG00000073435.11|NME/NM23 nucleoside diphosphate kinase 3
mm39_v1_chr14_-_50380137_50380137	0.148135	Pitx2_Otx2	ENSMUST00000213685.2|Olfr728|ENSMUSG00000050030.6|olfactory receptor 728
mm39_v1_chr12_-_114909863_114910059	0.146054	Pitx2_Otx2	ENSMUST00000103517.2|Ighv1-43|ENSMUSG00000095859.3|immunoglobulin heavy variable V1-43	ENSMUST00000195417.2|Ighv1-43|ENSMUSG00000095859.3|immunoglobulin heavy variable V1-43
mm39_v1_chr18_+_56565188_56565236	0.143154	Pitx2_Otx2	ENSMUST00000070166.6|Gramd3|ENSMUSG00000001700.11|GRAM domain containing 3
mm39_v1_chr6_-_66537080_66537080	0.14158	Pitx2_Otx2	ENSMUST00000079584.3|Vmn1r32|ENSMUSG00000062905.3|vomeronasal 1 receptor 32	ENSMUST00000227014.2|Vmn1r32|ENSMUSG00000062905.3|vomeronasal 1 receptor 32
mm39_v1_chr15_-_76491758_76491795	0.140885	Pitx2_Otx2	ENSMUST00000071898.7|Cpsf1|ENSMUSG00000034022.9|cleavage and polyadenylation specific factor 1
mm39_v1_chr7_-_26928029_26928061	0.138722	Pitx2_Otx2	ENSMUST00000003850.8|Itpkc|ENSMUSG00000003752.10|inositol 1,4,5-trisphosphate 3-kinase C
mm39_v1_chr8_-_105169621_105169679	0.136846	Pitx2_Otx2	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr6_-_139478919_139478974	0.136548	Pitx2_Otx2	ENSMUST00000170650.3|Rergl|ENSMUSG00000092164.3|RERG/RAS-like
mm39_v1_chr7_+_27151838_27151896	0.135106	Pitx2_Otx2	ENSMUST00000108357.8|Blvrb|ENSMUSG00000040466.17|biliverdin reductase B (flavin reductase (NADPH))
mm39_v1_chr18_+_20569226_20569241	0.134673	Pitx2_Otx2	ENSMUST00000019426.5|Dsg4|ENSMUSG00000001804.10|desmoglein 4
mm39_v1_chr9_+_44584523_44584546	0.131463	Pitx2_Otx2	ENSMUST00000034609.11|Treh|ENSMUSG00000032098.14|trehalase (brush-border membrane glycoprotein)	ENSMUST00000071219.12|Treh|ENSMUSG00000032098.14|trehalase (brush-border membrane glycoprotein)
mm39_v1_chr7_+_55700089_55700137	0.129303	Pitx2_Otx2	ENSMUST00000164095.3|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr2_+_83803467_83803467	0.128312	Pitx2_Otx2	ENSMUST00000180347.2|Gm13696|ENSMUSG00000096484.2|predicted gene 13696
mm39_v1_chr2_+_83809277_83809277	0.128312	Pitx2_Otx2	ENSMUST00000178533.2|Gm13694|ENSMUSG00000096337.2|predicted gene 13694
mm39_v1_chr2_+_83815087_83815087	0.128312	Pitx2_Otx2	ENSMUST00000099948.3|Gm13697|ENSMUSG00000095824.2|predicted gene 13697
mm39_v1_chr11_-_99241924_99241937	0.127789	Pitx2_Otx2	ENSMUST00000017732.3|Krt27|ENSMUSG00000017588.3|keratin 27
mm39_v1_chr9_+_100479732_100479851	0.127218	Pitx2_Otx2	ENSMUST00000124487.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr1_-_86353932_86353951	0.122569	Pitx2_Otx2	ENSMUST00000212541.2|Nmur1|ENSMUSG00000026237.7|neuromedin U receptor 1
mm39_v1_chr2_+_83820897_83820897	0.121625	Pitx2_Otx2	ENSMUST00000099947.3|Gm13691|ENSMUSG00000079247.3|predicted gene 13691
mm39_v1_chr11_+_82802079_82802120	0.117785	Pitx2_Otx2	ENSMUST00000018989.14|Unc45b|ENSMUSG00000018845.15|unc-45 myosin chaperone B	ENSMUST00000164945.3|Unc45b|ENSMUSG00000018845.15|unc-45 myosin chaperone B
mm39_v1_chr10_+_74896383_74896461	0.115892	Pitx2_Otx2	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr19_-_29625755_29625825	0.115859	Pitx2_Otx2	ENSMUST00000159692.8|Ermp1|ENSMUSG00000046324.13|endoplasmic reticulum metallopeptidase 1
mm39_v1_chr2_+_83797657_83797657	0.114698	Pitx2_Otx2	ENSMUST00000099951.3|Gm13695|ENSMUSG00000096729.2|predicted gene 13695
mm39_v1_chr9_+_122714750_122714750	0.113034	Pitx2_Otx2	ENSMUST00000215872.2|Zkscan7|ENSMUSG00000063488.7|zinc finger with KRAB and SCAN domains 7
mm39_v1_chr19_+_6385123_6385143	0.112609	Pitx2_Otx2	ENSMUST00000078137.12|Men1|ENSMUSG00000024947.18|multiple endocrine neoplasia 1
mm39_v1_chr3_-_113423774_113423798	0.112544	Pitx2_Otx2	ENSMUST00000092154.10|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106536.8|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106535.2|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3
mm39_v1_chr1_+_118249558_118249612	0.112239	Pitx2_Otx2	ENSMUST00000027626.13|Nifk|ENSMUSG00000026377.13|nucleolar protein interacting with the FHA domain of MKI67	ENSMUST00000112688.10|Nifk|ENSMUSG00000026377.13|nucleolar protein interacting with the FHA domain of MKI67
mm39_v1_chr13_-_120390808_120390808	0.111743	Pitx2_Otx2	ENSMUST00000187530.3|Gm21761|ENSMUSG00000096175.4|predicted gene, 21761
mm39_v1_chr13_-_67757786_67757826	0.109339	Pitx2_Otx2	ENSMUST00000138725.3|Zfp729b|ENSMUSG00000058093.14|zinc finger protein 729b	ENSMUST00000012873.16|Zfp729b|ENSMUSG00000058093.14|zinc finger protein 729b
mm39_v1_chr9_+_38026988_38026988	0.108789	Pitx2_Otx2	ENSMUST00000072290.5|Olfr889|ENSMUSG00000096356.4|olfactory receptor 889
mm39_v1_chr7_-_66038033_66038098	0.108238	Pitx2_Otx2	ENSMUST00000015277.14|Lrrk1|ENSMUSG00000015133.18|leucine-rich repeat kinase 1
mm39_v1_chr7_-_97970388_97970415	0.108173	Pitx2_Otx2	ENSMUST00000120520.8|Acer3|ENSMUSG00000030760.15|alkaline ceramidase 3
mm39_v1_chr6_-_43286488_43286488	0.107892	Pitx2_Otx2	ENSMUST00000031749.16|Nobox|ENSMUSG00000029736.16|NOBOX oogenesis homeobox
mm39_v1_chr1_+_87052668_87052730	0.107355	Pitx2_Otx2	ENSMUST00000044878.4|Akp3|ENSMUSG00000036500.5|alkaline phosphatase 3, intestine, not Mn requiring
mm39_v1_chr9_+_120400510_120400556	0.105332	Pitx2_Otx2	ENSMUST00000165532.3|Rpl14|ENSMUSG00000025794.10|ribosomal protein L14
mm39_v1_chr2_+_87609827_87609827	0.104495	Pitx2_Otx2	ENSMUST00000105210.3|Olfr152|ENSMUSG00000068816.4|olfactory receptor 152
mm39_v1_chr1_-_4855894_4855967	0.102001	Pitx2_Otx2	ENSMUST00000130201.8|Mrpl15|ENSMUSG00000033845.14|mitochondrial ribosomal protein L15	ENSMUST00000156816.7|Mrpl15|ENSMUSG00000033845.14|mitochondrial ribosomal protein L15	ENSMUST00000146665.3|Mrpl15|ENSMUSG00000033845.14|mitochondrial ribosomal protein L15
mm39_v1_chr14_-_52516695_52516796	0.101652	Pitx2_Otx2	ENSMUST00000167116.8|Rab2b|ENSMUSG00000022159.17|RAB2B, member RAS oncogene family	ENSMUST00000100631.11|Rab2b|ENSMUSG00000022159.17|RAB2B, member RAS oncogene family
mm39_v1_chr10_-_79875479_79875629	0.10113	Pitx2_Otx2	ENSMUST00000004786.10|Polr2e|ENSMUSG00000004667.19|polymerase (RNA) II (DNA directed) polypeptide E
mm39_v1_chr11_-_70350783_70350828	0.100217	Pitx2_Otx2	ENSMUST00000019064.9|Cxcl16|ENSMUSG00000018920.12|chemokine (C-X-C motif) ligand 16
mm39_v1_chr13_-_32522548_32522723	0.0993022	Pitx2_Otx2	ENSMUST00000041859.9|Gmds|ENSMUSG00000038372.15|GDP-mannose 4, 6-dehydratase
mm39_v1_chr11_-_99869879_99869927	0.0987007	Pitx2_Otx2	ENSMUST00000105051.2|Krtap29-1|ENSMUSG00000078254.2|keratin associated protein 29-1
mm39_v1_chr10_+_129297731_129297731	0.0974125	Pitx2_Otx2	ENSMUST00000213329.2|Olfr787|ENSMUSG00000096497.3|olfactory receptor 787
mm39_v1_chr2_+_62494622_62494644	0.0964911	Pitx2_Otx2	ENSMUST00000028257.3|Gca|ENSMUSG00000026893.5|grancalcin
mm39_v1_chr6_+_83891336_83891393	0.0957771	Pitx2_Otx2	ENSMUST00000204751.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000204202.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000203455.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113836.6|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113835.10|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000032088.14|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638
mm39_v1_chrY_+_5045445_5045445	0.0953976	Pitx2_Otx2	ENSMUST00000179629.2|Gm20918|ENSMUSG00000093927.3|predicted gene, 20918
mm39_v1_chr7_+_45289391_45289436	0.0949509	Pitx2_Otx2	ENSMUST00000148532.4|Mamstr|ENSMUSG00000042918.18|MEF2 activating motif and SAP domain containing transcriptional regulator
mm39_v1_chr9_+_88721217_88721362	0.0942429	Pitx2_Otx2	ENSMUST00000163255.9|Trim43c|ENSMUSG00000067399.11|tripartite motif-containing 43C	ENSMUST00000186363.2|Trim43c|ENSMUSG00000067399.11|tripartite motif-containing 43C
mm39_v1_chr3_-_88241735_88241773	0.0934049	Pitx2_Otx2	ENSMUST00000107552.2|Tmem79|ENSMUSG00000001420.14|transmembrane protein 79
mm39_v1_chr11_+_73131136_73131136	0.0923135	Pitx2_Otx2	ENSMUST00000138853.3|Trpv1|ENSMUSG00000005952.16|transient receptor potential cation channel, subfamily V, member 1
mm39_v1_chr3_+_105811712_105811743	0.0919148	Pitx2_Otx2	ENSMUST00000000574.3|Adora3|ENSMUSG00000000562.6|adenosine A3 receptor
mm39_v1_chr5_+_122781941_122782072	0.0918498	Pitx2_Otx2	ENSMUST00000100737.10|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000121489.8|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000031425.15|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000086247.6|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7
mm39_v1_chr7_-_30023320_30023320	0.0912694	Pitx2_Otx2	ENSMUST00000098586.5|Sdhaf1|ENSMUSG00000074211.5|succinate dehydrogenase complex assembly factor 1
mm39_v1_chr7_-_101518484_101518551	0.0909036	Pitx2_Otx2	ENSMUST00000140584.2|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000134145.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr7_+_28222261_28222261	0.0883565	Pitx2_Otx2	ENSMUST00000078364.4|Ifnl3|ENSMUSG00000060747.4|interferon lambda 3
mm39_v1_chr7_-_133304244_133304345	0.0876468	Pitx2_Otx2	ENSMUST00000209636.2|Uros|ENSMUSG00000030979.14|uroporphyrinogen III synthase	ENSMUST00000153698.3|Uros|ENSMUSG00000030979.14|uroporphyrinogen III synthase
mm39_v1_chr7_-_100613579_100613615	0.0874745	Pitx2_Otx2	ENSMUST00000060174.6|P2ry6|ENSMUSG00000048779.6|pyrimidinergic receptor P2Y, G-protein coupled, 6
mm39_v1_chr11_+_100960838_100960925	0.0867881	Pitx2_Otx2	ENSMUST00000001802.10|Naglu|ENSMUSG00000001751.10|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm39_v1_chr7_-_99002204_99002328	0.0852379	Pitx2_Otx2	ENSMUST00000208292.2|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1	ENSMUST00000207989.2|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1	ENSMUST00000208749.2|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1	ENSMUST00000169437.9|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1	ENSMUST00000208119.2|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1	ENSMUST00000207849.2|Serpinh1|ENSMUSG00000070436.13|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm39_v1_chr6_+_65019558_65019569	0.084939	Pitx2_Otx2	ENSMUST00000204801.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr3_-_108934916_108934963	0.0845438	Pitx2_Otx2	ENSMUST00000171143.2|Fam102b|ENSMUSG00000040339.11|family with sequence similarity 102, member B
mm39_v1_chr2_-_103114105_103114147	0.0811181	Pitx2_Otx2	ENSMUST00000111174.8|Ehf|ENSMUSG00000012350.16|ets homologous factor
mm39_v1_chr2_-_130471891_130471958	0.0809607	Pitx2_Otx2	ENSMUST00000110262.3|Fastkd5|ENSMUSG00000079043.4|FAST kinase domains 5	ENSMUST00000028761.5|Ubox5|ENSMUSG00000027300.11|U box domain containing 5
mm39_v1_chr7_-_15679982_15680031	0.0806762	Pitx2_Otx2	ENSMUST00000044158.13|Nop53|ENSMUSG00000041560.13|NOP53 ribosome biogenesis factor
mm39_v1_chr7_+_110628158_110628179	0.0795819	Pitx2_Otx2	ENSMUST00000005749.6|Ctr9|ENSMUSG00000005609.17|CTR9 homolog, Paf1/RNA polymerase II complex component
mm39_v1_chr5_+_138439730_138439802	0.0764708	Pitx2_Otx2	ENSMUST00000085856.12|Zfp157|ENSMUSG00000036898.17|zinc finger protein 157	ENSMUST00000110912.8|Zfp157|ENSMUSG00000036898.17|zinc finger protein 157	ENSMUST00000100524.3|Zfp157|ENSMUSG00000036898.17|zinc finger protein 157
mm39_v1_chr2_+_155617251_155617313	0.0764384	Pitx2_Otx2	ENSMUST00000029141.6|Mmp24|ENSMUSG00000027612.8|matrix metallopeptidase 24
mm39_v1_chr14_+_33675934_33675973	0.0755524	Pitx2_Otx2	ENSMUST00000035695.10|Rbp3|ENSMUSG00000041534.10|retinol binding protein 3, interstitial
mm39_v1_chr10_-_129591354_129591354	0.0731343	Pitx2_Otx2	ENSMUST00000059038.3|Olfr807|ENSMUSG00000050478.4|olfactory receptor 807
mm39_v1_chr5_+_112474307_112474358	0.071464	Pitx2_Otx2	ENSMUST00000129528.2|Tfip11|ENSMUSG00000029345.14|tuftelin interacting protein 11
mm39_v1_chr8_-_106306477_106306519	0.0704695	Pitx2_Otx2	ENSMUST00000194654.2|Agrp|ENSMUSG00000005705.11|agouti related neuropeptide
mm39_v1_chr8_+_124958099_124958188	0.0694815	Pitx2_Otx2	ENSMUST00000034458.9|Galnt2|ENSMUSG00000089704.10|polypeptide N-acetylgalactosaminyltransferase 2
mm39_v1_chr2_-_156022054_156022158	0.0687861	Pitx2_Otx2	ENSMUST00000126992.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000146288.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000029149.13|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000109587.9|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39	ENSMUST00000109584.8|Rbm39|ENSMUSG00000027620.17|RNA binding motif protein 39
mm39_v1_chr12_+_83572774_83572849	0.0680219	Pitx2_Otx2	ENSMUST00000223291.2|Dcaf4|ENSMUSG00000021222.10|DDB1 and CUL4 associated factor 4
mm39_v1_chr5_-_95419447_95419447	0.0677152	Pitx2_Otx2	ENSMUST00000180232.2|Pramel46|ENSMUSG00000096066.5|PRAME like 46
mm39_v1_chr7_-_113875342_113875365	0.0677048	Pitx2_Otx2	ENSMUST00000033008.10|Psma1|ENSMUSG00000030751.19|proteasome subunit alpha 1
mm39_v1_chr11_-_77678573_77678573	0.0653414	Pitx2_Otx2	ENSMUST00000092883.3|Gm10277|ENSMUSG00000069804.3|predicted gene 10277
mm39_v1_chr3_-_88362999_88363014	0.065325	Pitx2_Otx2	ENSMUST00000107531.8|Sema4a|ENSMUSG00000028064.18|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm39_v1_chr6_-_57367651_57367651	0.0634483	Pitx2_Otx2	ENSMUST00000164732.2|Vmn1r18|ENSMUSG00000091382.3|vomeronasal 1 receptor 18
mm39_v1_chr8_+_66419809_66419848	0.0633468	Pitx2_Otx2	ENSMUST00000072482.13|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1
mm39_v1_chr11_+_120563844_120563909	0.0632637	Pitx2_Otx2	ENSMUST00000106158.9|Aspscr1|ENSMUSG00000025142.19|alveolar soft part sarcoma chromosome region, candidate 1 (human)	ENSMUST00000103016.8|Aspscr1|ENSMUSG00000025142.19|alveolar soft part sarcoma chromosome region, candidate 1 (human)	ENSMUST00000168714.9|Aspscr1|ENSMUSG00000025142.19|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm39_v1_chr4_-_101122433_101122479	0.0628499	Pitx2_Otx2	ENSMUST00000149297.2|Jak1|ENSMUSG00000028530.15|Janus kinase 1	ENSMUST00000102781.10|Jak1|ENSMUSG00000028530.15|Janus kinase 1
mm39_v1_chr5_+_112474211_112474304	0.0557579	Pitx2_Otx2	ENSMUST00000031288.14|Tfip11|ENSMUSG00000029345.14|tuftelin interacting protein 11	ENSMUST00000198238.5|Tfip11|ENSMUSG00000029345.14|tuftelin interacting protein 11
mm39_v1_chr16_+_13637115_13637233	0.0545294	Pitx2_Otx2	ENSMUST00000023362.15|Ntan1|ENSMUSG00000022681.16|N-terminal Asn amidase	ENSMUST00000115805.3|Ntan1|ENSMUSG00000022681.16|N-terminal Asn amidase
mm39_v1_chr6_+_29529275_29529296	0.0535024	Pitx2_Otx2	ENSMUST00000163511.7|Irf5|ENSMUSG00000029771.13|interferon regulatory factor 5
mm39_v1_chr7_+_128346655_128346745	0.0525765	Pitx2_Otx2	ENSMUST00000042942.10|Sec23ip|ENSMUSG00000055319.9|Sec23 interacting protein
mm39_v1_chr11_+_120563818_120563835	0.0514222	Pitx2_Otx2	ENSMUST00000026135.15|Aspscr1|ENSMUSG00000025142.19|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm39_v1_chr11_-_98478018_98478194	0.0511111	Pitx2_Otx2	ENSMUST00000052919.8|Ormdl3|ENSMUSG00000038150.8|ORM1-like 3 (S. cerevisiae)
mm39_v1_chr8_+_70583971_70584044	0.049052	Pitx2_Otx2	ENSMUST00000211898.2|Nr2c2ap|ENSMUSG00000071078.7|nuclear receptor 2C2-associated protein	ENSMUST00000095273.7|Nr2c2ap|ENSMUSG00000071078.7|nuclear receptor 2C2-associated protein
mm39_v1_chr3_-_88241789_88241811	0.0488342	Pitx2_Otx2	ENSMUST00000001456.11|Tmem79|ENSMUSG00000001420.14|transmembrane protein 79
mm39_v1_chr13_-_67877228_67877292	0.0466532	Pitx2_Otx2	ENSMUST00000073157.15|Zfp65|ENSMUSG00000071281.13|zinc finger protein 65
mm39_v1_chr7_-_98305986_98306021	0.0428362	Pitx2_Otx2	ENSMUST00000205276.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor
mm39_v1_chr8_+_48275178_48275178	0.0409816	Pitx2_Otx2	ENSMUST00000079639.3|Cldn24|ENSMUSG00000061974.3|claudin 24
mm39_v1_chr7_+_28392263_28392296	0.0396862	Pitx2_Otx2	ENSMUST00000039998.11|Fbxo27|ENSMUSG00000037463.15|F-box protein 27
mm39_v1_chr17_+_35308206_35308284	0.0395635	Pitx2_Otx2	ENSMUST00000007251.14|Abhd16a|ENSMUSG00000007036.16|abhydrolase domain containing 16A
mm39_v1_chr16_+_27207722_27207748	0.0351335	Pitx2_Otx2	ENSMUST00000039443.14|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000096127.11|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr4_-_148529187_148529241	0.0338179	Pitx2_Otx2	ENSMUST00000051633.3|Ubiad1|ENSMUSG00000047719.3|UbiA prenyltransferase domain containing 1
mm39_v1_chr10_+_51553852_51553906	0.0297528	Pitx2_Otx2	ENSMUST00000122922.10|Rfx6|ENSMUSG00000019900.20|regulatory factor X, 6	ENSMUST00000219364.2|Rfx6|ENSMUSG00000019900.20|regulatory factor X, 6
mm39_v1_chr11_+_101144533_101144584	0.0292374	Pitx2_Otx2	ENSMUST00000007533.15|Vps25|ENSMUSG00000078656.12|vacuolar protein sorting 25	ENSMUST00000042477.13|Vps25|ENSMUSG00000078656.12|vacuolar protein sorting 25	ENSMUST00000100414.12|Vps25|ENSMUSG00000078656.12|vacuolar protein sorting 25	ENSMUST00000107280.11|Vps25|ENSMUSG00000078656.12|vacuolar protein sorting 25	ENSMUST00000121331.2|Vps25|ENSMUSG00000078656.12|vacuolar protein sorting 25
mm39_v1_chr8_-_68270870_68270921	0.0292171	Pitx2_Otx2	ENSMUST00000059374.5|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr16_-_91728531_91728575	0.0289879	Pitx2_Otx2	ENSMUST00000023677.10|Atp5o|ENSMUSG00000022956.12|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
mm39_v1_chr11_-_107080150_107080207	0.0276182	Pitx2_Otx2	ENSMUST00000106757.8|Nol11|ENSMUSG00000018433.15|nucleolar protein 11	ENSMUST00000018577.8|Nol11|ENSMUSG00000018433.15|nucleolar protein 11
mm39_v1_chr8_+_70592337_70592384	0.0272041	Pitx2_Otx2	ENSMUST00000163756.2|Mef2b|ENSMUSG00000079033.11|myocyte enhancer factor 2B
mm39_v1_chr19_+_13208692_13208692	0.0266672	Pitx2_Otx2	ENSMUST00000207246.4|Olfr1463|ENSMUSG00000096365.5|olfactory receptor 1463
mm39_v1_chrY_-_9414341_9414341	0.0263955	Pitx2_Otx2	ENSMUST00000178374.2|Gm21874|ENSMUSG00000096223.3|predicted gene, 21874
mm39_v1_chr7_+_27186335_27186385	0.0254075	Pitx2_Otx2	ENSMUST00000008528.8|Sertad1|ENSMUSG00000008384.9|SERTA domain containing 1
mm39_v1_chr16_-_20972750_20972750	0.0221962	Pitx2_Otx2	ENSMUST00000170665.3|Teddm3|ENSMUSG00000090356.3|transmembrane epididymal family member 3
mm39_v1_chr4_-_126954878_126954945	0.0218928	Pitx2_Otx2	ENSMUST00000136186.2|Zmym1|ENSMUSG00000043872.15|zinc finger, MYM domain containing 1	ENSMUST00000106099.8|Zmym1|ENSMUSG00000043872.15|zinc finger, MYM domain containing 1	ENSMUST00000106102.9|Zmym1|ENSMUSG00000043872.15|zinc finger, MYM domain containing 1
mm39_v1_chr7_-_15701395_15701492	0.0205977	Pitx2_Otx2	ENSMUST00000144956.2|Ehd2|ENSMUSG00000074364.7|EH-domain containing 2	ENSMUST00000098799.5|Ehd2|ENSMUSG00000074364.7|EH-domain containing 2
mm39_v1_chr1_+_174158083_174158087	0.0202991	Pitx2_Otx2	ENSMUST00000027816.5|Mptx1|ENSMUSG00000026531.5|mucosal pentraxin 1
mm39_v1_chr6_+_60921456_60921473	0.0201886	Pitx2_Otx2	ENSMUST00000129603.4|Mmrn1|ENSMUSG00000054641.11|multimerin 1	ENSMUST00000204333.2|Mmrn1|ENSMUSG00000054641.11|multimerin 1
mm39_v1_chr17_-_79076487_79076529	0.0175592	Pitx2_Otx2	ENSMUST00000233850.2|Heatr5b|ENSMUSG00000039414.11|HEAT repeat containing 5B
mm39_v1_chr4_-_131871797_131871842	0.01725	Pitx2_Otx2	ENSMUST00000056336.2|Oprd1|ENSMUSG00000050511.2|opioid receptor, delta 1
mm39_v1_chr1_+_74830675_74830675	0.0166012	Pitx2_Otx2	ENSMUST00000006718.15|Wnt10a|ENSMUSG00000026167.15|wingless-type MMTV integration site family, member 10A
mm39_v1_chr7_+_126446588_126446931	0.0147746	Pitx2_Otx2	ENSMUST00000141805.8|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000064110.14|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000205938.2|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000152051.8|Doc2a|ENSMUSG00000052301.15|double C2, alpha
mm39_v1_chr13_-_112698563_112698608	0.0141661	Pitx2_Otx2	ENSMUST00000224510.2|Il31ra|ENSMUSG00000050377.9|interleukin 31 receptor A
mm39_v1_chr1_+_155433858_155433979	0.0119354	Pitx2_Otx2	ENSMUST00000080138.13|Acbd6|ENSMUSG00000033701.14|acyl-Coenzyme A binding domain containing 6	ENSMUST00000035560.9|Acbd6|ENSMUSG00000033701.14|acyl-Coenzyme A binding domain containing 6	ENSMUST00000097529.5|Acbd6|ENSMUSG00000033701.14|acyl-Coenzyme A binding domain containing 6
mm39_v1_chr4_+_143139490_143139557	0.00974489	Pitx2_Otx2	ENSMUST00000132915.2|Pramel12|ENSMUSG00000046862.15|PRAME like 12	ENSMUST00000037356.8|Pramel12|ENSMUSG00000046862.15|PRAME like 12
mm39_v1_chr5_-_24049079_24049159	0.00923987	Pitx2_Otx2	ENSMUST00000030851.7|Tomm7|ENSMUSG00000028998.7|translocase of outer mitochondrial membrane 7
mm39_v1_chr17_+_75485791_75485820	0.00845198	Pitx2_Otx2	ENSMUST00000135447.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1	ENSMUST00000112516.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr3_+_96537235_96537273	0.00693171	Pitx2_Otx2	ENSMUST00000048915.11|Rbm8a|ENSMUSG00000038374.11|RNA binding motif protein 8a	ENSMUST00000196456.5|Rbm8a|ENSMUSG00000038374.11|RNA binding motif protein 8a	ENSMUST00000198027.5|Rbm8a|ENSMUSG00000038374.11|RNA binding motif protein 8a
mm39_v1_chr9_-_21061196_21061278	0.00118377	Pitx2_Otx2	ENSMUST00000215296.2|Cdc37|ENSMUSG00000019471.11|cell division cycle 37	ENSMUST00000019615.11|Cdc37|ENSMUSG00000019471.11|cell division cycle 37
mm39_v1_chr2_-_76503382_76503472	7.23496e-05	Pitx2_Otx2	ENSMUST00000002809.14|Fkbp7|ENSMUSG00000002732.15|FK506 binding protein 7
