mm39_v1_chrX_+_7786061_7786140	113.854	Rfx3_Rfx1_Rfx4	ENSMUST00000041096.4|Pcsk1n|ENSMUSG00000039278.11|proprotein convertase subtilisin/kexin type 1 inhibitor
mm39_v1_chr18_+_61058684_61058712	80.1282	Rfx3_Rfx1_Rfx4	ENSMUST00000102888.10|Camk2a|ENSMUSG00000024617.17|calcium/calmodulin-dependent protein kinase II alpha	ENSMUST00000025519.11|Camk2a|ENSMUSG00000024617.17|calcium/calmodulin-dependent protein kinase II alpha
mm39_v1_chr10_-_81308693_81308961	70.7616	Rfx3_Rfx1_Rfx4	ENSMUST00000147524.3|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5	ENSMUST00000119060.8|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5
mm39_v1_chr9_-_60595401_60595467	63.3903	Rfx3_Rfx1_Rfx4	ENSMUST00000114034.9|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000065603.12|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49
mm39_v1_chr11_-_61344818_61344932	59.5929	Rfx3_Rfx1_Rfx4	ENSMUST00000060255.14|Rnf112|ENSMUSG00000010086.18|ring finger protein 112	ENSMUST00000054927.14|Rnf112|ENSMUSG00000010086.18|ring finger protein 112	ENSMUST00000102661.4|Rnf112|ENSMUSG00000010086.18|ring finger protein 112
mm39_v1_chr2_+_121120070_121120087	57.323	Rfx3_Rfx1_Rfx4	ENSMUST00000094639.10|Map1a|ENSMUSG00000027254.14|microtubule-associated protein 1 A
mm39_v1_chr7_+_16693604_16693726	54.0575	Rfx3_Rfx1_Rfx4	ENSMUST00000038163.8|Pnmal1|ENSMUSG00000041141.8|PNMA-like 1
mm39_v1_chr1_+_160970276_160970337	53.4197	Rfx3_Rfx1_Rfx4	ENSMUST00000111608.8|Ankrd45|ENSMUSG00000044835.16|ankyrin repeat domain 45	ENSMUST00000052245.9|Ankrd45|ENSMUSG00000044835.16|ankyrin repeat domain 45
mm39_v1_chr8_+_96260694_96260752	51.383	Rfx3_Rfx1_Rfx4	ENSMUST00000041569.5|Ccdc113|ENSMUSG00000036598.5|coiled-coil domain containing 113
mm39_v1_chr10_-_39009844_39009908	50.4077	Rfx3_Rfx1_Rfx4	ENSMUST00000134279.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B	ENSMUST00000139743.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B	ENSMUST00000149949.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B	ENSMUST00000124941.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B	ENSMUST00000125042.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B	ENSMUST00000063204.9|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B
mm39_v1_chr1_+_172348611_172348748	49.6632	Rfx3_Rfx1_Rfx4	ENSMUST00000085894.12|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45	ENSMUST00000161140.8|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45	ENSMUST00000162988.8|Cfap45|ENSMUSG00000026546.17|cilia and flagella associated protein 45
mm39_v1_chr1_-_172156884_172156893	49.1424	Rfx3_Rfx1_Rfx4	ENSMUST00000062387.8|Kcnj9|ENSMUSG00000038026.13|potassium inwardly-rectifying channel, subfamily J, member 9
mm39_v1_chr7_+_133378586_133378671	49.1226	Rfx3_Rfx1_Rfx4	ENSMUST00000065359.12|Fank1|ENSMUSG00000053111.14|fibronectin type 3 and ankyrin repeat domains 1	ENSMUST00000209511.2|Fank1|ENSMUSG00000053111.14|fibronectin type 3 and ankyrin repeat domains 1	ENSMUST00000151031.2|Fank1|ENSMUSG00000053111.14|fibronectin type 3 and ankyrin repeat domains 1	ENSMUST00000121560.2|Fank1|ENSMUSG00000053111.14|fibronectin type 3 and ankyrin repeat domains 1
mm39_v1_chr14_+_14159978_14160002	48.366	Rfx3_Rfx1_Rfx4	ENSMUST00000137133.2|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A	ENSMUST00000036070.15|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A	ENSMUST00000121887.8|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A
mm39_v1_chr7_-_82297676_82297753	47.6367	Rfx3_Rfx1_Rfx4	ENSMUST00000207693.2|Saxo2|ENSMUSG00000038570.16|stabilizer of axonemal microtubules 2	ENSMUST00000056728.5|Saxo2|ENSMUSG00000038570.16|stabilizer of axonemal microtubules 2	ENSMUST00000156720.8|Saxo2|ENSMUSG00000038570.16|stabilizer of axonemal microtubules 2	ENSMUST00000126478.2|Saxo2|ENSMUSG00000038570.16|stabilizer of axonemal microtubules 2
mm39_v1_chr3_-_108443769_108443852	47.1775	Rfx3_Rfx1_Rfx4	ENSMUST00000048012.13|Elapor1|ENSMUSG00000040412.18|endosome-lysosome associated apoptosis and autophagy regulator 1	ENSMUST00000106625.10|Elapor1|ENSMUSG00000040412.18|endosome-lysosome associated apoptosis and autophagy regulator 1
mm39_v1_chr15_-_66372704_66372759	47.1673	Rfx3_Rfx1_Rfx4	ENSMUST00000023006.7|Lrrc6|ENSMUSG00000022375.7|leucine rich repeat containing 6 (testis)
mm39_v1_chr6_+_83133441_83133501	47.0519	Rfx3_Rfx1_Rfx4	ENSMUST00000203203.2|1700003E16Rik|ENSMUSG00000030030.6|RIKEN cDNA 1700003E16 gene
mm39_v1_chr10_+_74872898_74872931	46.9971	Rfx3_Rfx1_Rfx4	ENSMUST00000147802.9|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family	ENSMUST00000020391.13|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family	ENSMUST00000234625.2|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family
mm39_v1_chr4_+_110254858_110254905	46.9639	Rfx3_Rfx1_Rfx4	ENSMUST00000106589.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106587.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106591.8|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106592.8|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4
mm39_v1_chr9_-_60594742_60594955	45.3996	Rfx3_Rfx1_Rfx4	ENSMUST00000114032.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000166168.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000132366.2|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49
mm39_v1_chr6_+_83133381_83133434	45.3026	Rfx3_Rfx1_Rfx4	ENSMUST00000032106.6|1700003E16Rik|ENSMUSG00000030030.6|RIKEN cDNA 1700003E16 gene
mm39_v1_chr19_+_5100815_5100887	45.0111	Rfx3_Rfx1_Rfx4	ENSMUST00000224178.2|Rin1|ENSMUSG00000024883.9|Ras and Rab interactor 1	ENSMUST00000225799.3|Rin1|ENSMUSG00000024883.9|Ras and Rab interactor 1	ENSMUST00000025818.8|Rin1|ENSMUSG00000024883.9|Ras and Rab interactor 1
mm39_v1_chr17_-_31496352_31496357	44.7942	Rfx3_Rfx1_Rfx4	ENSMUST00000024832.9|Rsph1|ENSMUSG00000024033.11|radial spoke head 1 homolog (Chlamydomonas)
mm39_v1_chr1_+_66426127_66426159	44.7617	Rfx3_Rfx1_Rfx4	ENSMUST00000145419.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr11_-_116226175_116226225	44.429	Rfx3_Rfx1_Rfx4	ENSMUST00000036215.8|Foxj1|ENSMUSG00000034227.8|forkhead box J1
mm39_v1_chr7_+_16678568_16678646	44.2787	Rfx3_Rfx1_Rfx4	ENSMUST00000094807.6|Pnmal2|ENSMUSG00000070802.6|PNMA-like 2
mm39_v1_chr2_-_73605684_73605723	43.7621	Rfx3_Rfx1_Rfx4	ENSMUST00000112024.10|Chn1|ENSMUSG00000056486.19|chimerin 1	ENSMUST00000180045.8|Chn1|ENSMUSG00000056486.19|chimerin 1
mm39_v1_chr11_-_72252663_72252725	43.7272	Rfx3_Rfx1_Rfx4	ENSMUST00000108503.9|Tekt1|ENSMUSG00000020799.17|tektin 1
mm39_v1_chr7_-_139662402_139662469	42.917	Rfx3_Rfx1_Rfx4	ENSMUST00000026541.15|Caly|ENSMUSG00000025468.16|calcyon neuron-specific vesicular protein	ENSMUST00000211283.2|Caly|ENSMUSG00000025468.16|calcyon neuron-specific vesicular protein
mm39_v1_chrX_+_135893894_135893965	42.7621	Rfx3_Rfx1_Rfx4	ENSMUST00000113067.8|Zcchc18|ENSMUSG00000031428.12|zinc finger, CCHC domain containing 18	ENSMUST00000101227.3|Zcchc18|ENSMUSG00000031428.12|zinc finger, CCHC domain containing 18
mm39_v1_chr16_-_16647139_16647215	42.5529	Rfx3_Rfx1_Rfx4	ENSMUST00000023468.6|Spag6l|ENSMUSG00000022783.12|sperm associated antigen 6-like
mm39_v1_chr1_-_60082246_60082334	42.2549	Rfx3_Rfx1_Rfx4	ENSMUST00000027172.13|Ica1l|ENSMUSG00000026018.13|islet cell autoantigen 1-like	ENSMUST00000191251.7|Ica1l|ENSMUSG00000026018.13|islet cell autoantigen 1-like
mm39_v1_chr4_+_110254907_110255005	42.1746	Rfx3_Rfx1_Rfx4	ENSMUST00000097920.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000080744.13|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4
mm39_v1_chr9_-_121668527_121668563	42.1143	Rfx3_Rfx1_Rfx4	ENSMUST00000135986.9|Ccdc13|ENSMUSG00000079235.11|coiled-coil domain containing 13
mm39_v1_chr5_-_103359117_103359200	41.9119	Rfx3_Rfx1_Rfx4	ENSMUST00000112846.8|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10	ENSMUST00000170792.9|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10	ENSMUST00000112847.9|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10	ENSMUST00000238446.3|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10	ENSMUST00000133069.8|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10
mm39_v1_chr19_+_5100475_5100509	41.8942	Rfx3_Rfx1_Rfx4	ENSMUST00000225427.2|Rin1|ENSMUSG00000024883.9|Ras and Rab interactor 1
mm39_v1_chr15_-_33687986_33688030	41.3601	Rfx3_Rfx1_Rfx4	ENSMUST00000042021.5|Tspyl5|ENSMUSG00000038984.5|testis-specific protein, Y-encoded-like 5
mm39_v1_chr4_+_125952349_125952406	41.2138	Rfx3_Rfx1_Rfx4	ENSMUST00000035497.5|Oscp1|ENSMUSG00000042616.9|organic solute carrier partner 1	ENSMUST00000143712.3|Oscp1|ENSMUSG00000042616.9|organic solute carrier partner 1
mm39_v1_chr4_+_152423075_152423166	40.9943	Rfx3_Rfx1_Rfx4	ENSMUST00000030775.12|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5	ENSMUST00000164662.8|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5
mm39_v1_chr15_+_82140224_82140331	40.4985	Rfx3_Rfx1_Rfx4	ENSMUST00000143238.2|1500009C09Rik|ENSMUSG00000068099.6|RIKEN cDNA 1500009C09 gene
mm39_v1_chr5_+_124736812_124736862	40.0639	Rfx3_Rfx1_Rfx4	ENSMUST00000239501.2|Tctn2|ENSMUSG00000118662.2|tectonic family member 2
mm39_v1_chr1_-_172156828_172156874	39.7676	Rfx3_Rfx1_Rfx4	ENSMUST00000194204.2|Kcnj9|ENSMUSG00000038026.13|potassium inwardly-rectifying channel, subfamily J, member 9
mm39_v1_chr3_+_14011445_14011476	39.5754	Rfx3_Rfx1_Rfx4	ENSMUST00000192209.6|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like	ENSMUST00000171075.8|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like	ENSMUST00000108372.4|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like
mm39_v1_chr4_+_43669266_43669329	39.5266	Rfx3_Rfx1_Rfx4	ENSMUST00000107864.8|Tmem8b|ENSMUSG00000078716.11|transmembrane protein 8B
mm39_v1_chr10_-_39009910_39009923	39.4606	Rfx3_Rfx1_Rfx4	ENSMUST00000135785.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B
mm39_v1_chr7_+_16716989_16717075	39.1068	Rfx3_Rfx1_Rfx4	ENSMUST00000206129.3|Gm42372|ENSMUSG00000108348.3|predicted gene, 42372
mm39_v1_chr17_-_31496301_31496326	38.9495	Rfx3_Rfx1_Rfx4	ENSMUST00000235144.2|Rsph1|ENSMUSG00000024033.11|radial spoke head 1 homolog (Chlamydomonas)
mm39_v1_chr4_-_119272690_119272720	38.425	Rfx3_Rfx1_Rfx4	ENSMUST00000238287.2|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30	ENSMUST00000238759.2|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30	ENSMUST00000063642.10|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30
mm39_v1_chr8_-_91544021_91544021	38.1312	Rfx3_Rfx1_Rfx4	ENSMUST00000209208.2|Gm19935|ENSMUSG00000110332.2|predicted gene, 19935
mm39_v1_chr18_+_61058716_61058797	38.1006	Rfx3_Rfx1_Rfx4	ENSMUST00000115297.8|Camk2a|ENSMUSG00000024617.17|calcium/calmodulin-dependent protein kinase II alpha
mm39_v1_chr9_+_59496571_59496636	38.0993	Rfx3_Rfx1_Rfx4	ENSMUST00000121266.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000118164.3|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr5_+_66417233_66417255	37.459	Rfx3_Rfx1_Rfx4	ENSMUST00000202994.4|Nsun7|ENSMUSG00000029206.14|NOL1/NOP2/Sun domain family, member 7	ENSMUST00000201100.4|Nsun7|ENSMUSG00000029206.14|NOL1/NOP2/Sun domain family, member 7
mm39_v1_chr9_-_8042785_8042883	37.3833	Rfx3_Rfx1_Rfx4	ENSMUST00000215478.2|Cfap300|ENSMUSG00000053070.6|cilia and flagella associated protein 300	ENSMUST00000065291.2|Cfap300|ENSMUSG00000053070.6|cilia and flagella associated protein 300
mm39_v1_chr8_+_55053809_55053839	37.3675	Rfx3_Rfx1_Rfx4	ENSMUST00000033917.7|Spata4|ENSMUSG00000031518.7|spermatogenesis associated 4
mm39_v1_chr2_+_145776720_145776736	37.2963	Rfx3_Rfx1_Rfx4	ENSMUST00000152515.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61	ENSMUST00000138774.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61	ENSMUST00000130168.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61	ENSMUST00000133433.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61	ENSMUST00000118002.2|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61
mm39_v1_chr11_+_87651359_87651413	37.2631	Rfx3_Rfx1_Rfx4	ENSMUST00000039627.12|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1	ENSMUST00000100644.10|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1
mm39_v1_chr11_+_69920542_69920663	37.2288	Rfx3_Rfx1_Rfx4	ENSMUST00000232266.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000132597.5|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr8_+_123939596_123939650	37.1781	Rfx3_Rfx1_Rfx4	ENSMUST00000212892.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33	ENSMUST00000212161.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33	ENSMUST00000060133.8|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33	ENSMUST00000212346.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33	ENSMUST00000212637.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33
mm39_v1_chr5_+_29400981_29401030	37.0817	Rfx3_Rfx1_Rfx4	ENSMUST00000160888.8|Rnf32|ENSMUSG00000029130.13|ring finger protein 32	ENSMUST00000159272.8|Rnf32|ENSMUSG00000029130.13|ring finger protein 32	ENSMUST00000001247.12|Rnf32|ENSMUSG00000029130.13|ring finger protein 32	ENSMUST00000161398.8|Rnf32|ENSMUSG00000029130.13|ring finger protein 32	ENSMUST00000160246.8|Rnf32|ENSMUSG00000029130.13|ring finger protein 32
mm39_v1_chr6_-_124756645_124756698	36.9194	Rfx3_Rfx1_Rfx4	ENSMUST00000147669.2|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000128697.8|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000032218.10|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000112475.9|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23
mm39_v1_chr7_+_3439144_3439225	36.9059	Rfx3_Rfx1_Rfx4	ENSMUST00000182222.8|Cacng8|ENSMUSG00000053395.16|calcium channel, voltage-dependent, gamma subunit 8
mm39_v1_chr7_-_105218472_105218518	36.3995	Rfx3_Rfx1_Rfx4	ENSMUST00000187683.7|Apbb1|ENSMUSG00000037032.17|amyloid beta (A4) precursor protein-binding, family B, member 1	ENSMUST00000210079.2|Apbb1|ENSMUSG00000037032.17|amyloid beta (A4) precursor protein-binding, family B, member 1	ENSMUST00000187051.7|Apbb1|ENSMUSG00000037032.17|amyloid beta (A4) precursor protein-binding, family B, member 1	ENSMUST00000189265.7|Apbb1|ENSMUSG00000037032.17|amyloid beta (A4) precursor protein-binding, family B, member 1	ENSMUST00000190369.7|Apbb1|ENSMUSG00000037032.17|amyloid beta (A4) precursor protein-binding, family B, member 1
mm39_v1_chr7_-_30234422_30234472	36.1166	Rfx3_Rfx1_Rfx4	ENSMUST00000208522.2|Arhgap33|ENSMUSG00000036882.8|Rho GTPase activating protein 33	ENSMUST00000207860.2|Arhgap33|ENSMUSG00000036882.8|Rho GTPase activating protein 33	ENSMUST00000208538.2|Arhgap33|ENSMUSG00000036882.8|Rho GTPase activating protein 33
mm39_v1_chr18_-_77134980_77135009	35.9308	Rfx3_Rfx1_Rfx4	ENSMUST00000154665.2|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2	ENSMUST00000026486.13|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2	ENSMUST00000123650.2|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2	ENSMUST00000126153.8|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2
mm39_v1_chr17_+_27904155_27904213	35.7755	Rfx3_Rfx1_Rfx4	ENSMUST00000231669.2|Pacsin1|ENSMUSG00000040276.16|protein kinase C and casein kinase substrate in neurons 1	ENSMUST00000097360.3|Pacsin1|ENSMUSG00000040276.16|protein kinase C and casein kinase substrate in neurons 1	ENSMUST00000231236.2|Pacsin1|ENSMUSG00000040276.16|protein kinase C and casein kinase substrate in neurons 1
mm39_v1_chr17_-_80885197_80885242	35.7571	Rfx3_Rfx1_Rfx4	ENSMUST00000234602.2|Cdkl4|ENSMUSG00000033966.9|cyclin-dependent kinase-like 4
mm39_v1_chr16_+_14724485_14724544	35.6362	Rfx3_Rfx1_Rfx4	ENSMUST00000090277.3|Efcab1|ENSMUSG00000068617.6|EF-hand calcium binding domain 1
mm39_v1_chr9_-_121106209_121106282	35.2927	Rfx3_Rfx1_Rfx4	ENSMUST00000051479.13|Ulk4|ENSMUSG00000040936.16|unc-51-like kinase 4	ENSMUST00000171923.8|Ulk4|ENSMUSG00000040936.16|unc-51-like kinase 4
mm39_v1_chr11_+_3845221_3845308	35.2564	Rfx3_Rfx1_Rfx4	ENSMUST00000109996.8|Dusp18|ENSMUSG00000047205.13|dual specificity phosphatase 18	ENSMUST00000055931.5|Dusp18|ENSMUSG00000047205.13|dual specificity phosphatase 18
mm39_v1_chr18_-_43820759_43820838	34.9137	Rfx3_Rfx1_Rfx4	ENSMUST00000082254.8|Jakmip2|ENSMUSG00000024502.11|janus kinase and microtubule interacting protein 2
mm39_v1_chr4_+_152423344_152423429	34.8322	Rfx3_Rfx1_Rfx4	ENSMUST00000005175.5|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5
mm39_v1_chr4_-_124959395_124959496	34.8296	Rfx3_Rfx1_Rfx4	ENSMUST00000036383.4|Dnali1|ENSMUSG00000042707.7|dynein, axonemal, light intermediate polypeptide 1
mm39_v1_chr1_+_160970233_160970272	34.7254	Rfx3_Rfx1_Rfx4	ENSMUST00000125018.8|Ankrd45|ENSMUSG00000044835.16|ankyrin repeat domain 45
mm39_v1_chr18_-_77134939_77134976	34.7126	Rfx3_Rfx1_Rfx4	ENSMUST00000137354.8|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2	ENSMUST00000137498.8|Katnal2|ENSMUSG00000025420.14|katanin p60 subunit A-like 2
mm39_v1_chr7_+_118454957_118455024	34.3471	Rfx3_Rfx1_Rfx4	ENSMUST00000208658.2|Iqck|ENSMUSG00000073856.12|IQ motif containing K	ENSMUST00000098087.9|Iqck|ENSMUSG00000073856.12|IQ motif containing K	ENSMUST00000106547.2|Iqck|ENSMUSG00000073856.12|IQ motif containing K
mm39_v1_chr2_-_73605387_73605456	34.2272	Rfx3_Rfx1_Rfx4	ENSMUST00000166199.9|Chn1|ENSMUSG00000056486.19|chimerin 1
mm39_v1_chr6_-_90405377_90405440	34.1961	Rfx3_Rfx1_Rfx4	ENSMUST00000135757.3|Cfap100|ENSMUSG00000048794.15|cilia and flagella associated protein 100	ENSMUST00000165673.5|Cfap100|ENSMUSG00000048794.15|cilia and flagella associated protein 100	ENSMUST00000062750.12|Cfap100|ENSMUSG00000048794.15|cilia and flagella associated protein 100	ENSMUST00000127508.4|Cfap100|ENSMUSG00000048794.15|cilia and flagella associated protein 100
mm39_v1_chr7_-_139662135_139662155	34.0305	Rfx3_Rfx1_Rfx4	ENSMUST00000211044.2|Caly|ENSMUSG00000025468.16|calcyon neuron-specific vesicular protein
mm39_v1_chr3_-_89152320_89152506	33.9538	Rfx3_Rfx1_Rfx4	ENSMUST00000107464.8|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46	ENSMUST00000090924.13|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46
mm39_v1_chr17_+_46564457_46564457	33.9427	Rfx3_Rfx1_Rfx4	ENSMUST00000233692.2|Lrrc73|ENSMUSG00000071073.6|leucine rich repeat containing 73
mm39_v1_chr10_+_80131764_80131830	33.9354	Rfx3_Rfx1_Rfx4	ENSMUST00000105359.8|Apc2|ENSMUSG00000020135.14|APC regulator of WNT signaling pathway 2
mm39_v1_chr11_+_53458188_53458353	33.8615	Rfx3_Rfx1_Rfx4	ENSMUST00000057330.15|Kif3a|ENSMUSG00000018395.20|kinesin family member 3A	ENSMUST00000120613.9|Kif3a|ENSMUSG00000018395.20|kinesin family member 3A	ENSMUST00000173744.8|Kif3a|ENSMUSG00000018395.20|kinesin family member 3A	ENSMUST00000118353.9|Kif3a|ENSMUSG00000018395.20|kinesin family member 3A
mm39_v1_chr10_+_34173426_34173509	33.6985	Rfx3_Rfx1_Rfx4	ENSMUST00000047935.8|Tspyl4|ENSMUSG00000039485.9|TSPY-like 4
mm39_v1_chr2_+_35939463_35939532	33.2941	Rfx3_Rfx1_Rfx4	ENSMUST00000028256.5|Morn5|ENSMUSG00000026894.5|MORN repeat containing 5
mm39_v1_chr6_-_83133379_83133396	33.1334	Rfx3_Rfx1_Rfx4	ENSMUST00000153148.8|Wdr54|ENSMUSG00000030032.15|WD repeat domain 54	ENSMUST00000125894.9|Wdr54|ENSMUSG00000030032.15|WD repeat domain 54
mm39_v1_chr2_+_28590159_28590199	32.5669	Rfx3_Rfx1_Rfx4	ENSMUST00000074156.7|Ak8|ENSMUSG00000026807.9|adenylate kinase 8
mm39_v1_chr7_-_139662159_139662193	32.5099	Rfx3_Rfx1_Rfx4	ENSMUST00000166758.4|Caly|ENSMUSG00000025468.16|calcyon neuron-specific vesicular protein
mm39_v1_chr4_-_43669141_43669200	32.3783	Rfx3_Rfx1_Rfx4	ENSMUST00000056474.7|Fam221b|ENSMUSG00000043633.7|family with sequence similarity 221, member B
mm39_v1_chr12_+_72583114_72583169	32.3173	Rfx3_Rfx1_Rfx4	ENSMUST00000044352.8|Pcnx4|ENSMUSG00000034501.8|pecanex homolog 4
mm39_v1_chr4_-_128856213_128856242	32.2607	Rfx3_Rfx1_Rfx4	ENSMUST00000119354.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000106068.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000030581.10|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2
mm39_v1_chr9_+_110306052_110306068	32.2302	Rfx3_Rfx1_Rfx4	ENSMUST00000197248.5|Kif9|ENSMUSG00000032489.18|kinesin family member 9	ENSMUST00000061155.12|Kif9|ENSMUSG00000032489.18|kinesin family member 9	ENSMUST00000198043.5|Kif9|ENSMUSG00000032489.18|kinesin family member 9	ENSMUST00000084952.8|Kif9|ENSMUSG00000032489.18|kinesin family member 9
mm39_v1_chr6_+_38358404_38358463	32.2152	Rfx3_Rfx1_Rfx4	ENSMUST00000162554.8|Ttc26|ENSMUSG00000056832.15|tetratricopeptide repeat domain 26	ENSMUST00000161751.8|Ttc26|ENSMUSG00000056832.15|tetratricopeptide repeat domain 26
mm39_v1_chr8_+_70285133_70285184	32.026	Rfx3_Rfx1_Rfx4	ENSMUST00000081503.13|Pbx4|ENSMUSG00000031860.18|pre B cell leukemia homeobox 4
mm39_v1_chr7_+_130375799_130375915	31.7014	Rfx3_Rfx1_Rfx4	ENSMUST00000048453.7|Btbd16|ENSMUSG00000040298.7|BTB (POZ) domain containing 16	ENSMUST00000208593.2|Btbd16|ENSMUSG00000040298.7|BTB (POZ) domain containing 16
mm39_v1_chr10_+_41366433_41366481	31.6959	Rfx3_Rfx1_Rfx4	ENSMUST00000105507.5|Ppil6|ENSMUSG00000078451.6|peptidylprolyl isomerase (cyclophilin)-like 6
mm39_v1_chr3_-_126792056_126792112	31.4793	Rfx3_Rfx1_Rfx4	ENSMUST00000044443.15|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain
mm39_v1_chr7_+_45434755_45434814	31.4746	Rfx3_Rfx1_Rfx4	ENSMUST00000233503.2|Lmtk3|ENSMUSG00000062044.17|lemur tyrosine kinase 3	ENSMUST00000120005.10|Lmtk3|ENSMUSG00000062044.17|lemur tyrosine kinase 3	ENSMUST00000211609.2|Lmtk3|ENSMUSG00000062044.17|lemur tyrosine kinase 3
mm39_v1_chr9_+_107424488_107424575	31.3131	Rfx3_Rfx1_Rfx4	ENSMUST00000010188.9|Zmynd10|ENSMUSG00000010044.13|zinc finger, MYND domain containing 10
mm39_v1_chr3_+_94391644_94391671	31.1359	Rfx3_Rfx1_Rfx4	ENSMUST00000197677.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr12_+_29578354_29578468	31.0925	Rfx3_Rfx1_Rfx4	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr19_-_46315543_46315595	30.9475	Rfx3_Rfx1_Rfx4	ENSMUST00000223917.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000224447.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000041391.5|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000096029.12|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr8_+_123939566_123939587	30.9126	Rfx3_Rfx1_Rfx4	ENSMUST00000212760.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33	ENSMUST00000212523.2|Spata33|ENSMUSG00000048478.8|spermatogenesis associated 33
mm39_v1_chr11_+_61395964_61396037	30.7504	Rfx3_Rfx1_Rfx4	ENSMUST00000102657.10|B9d1|ENSMUSG00000001039.13|B9 protein domain 1
mm39_v1_chr11_+_75890738_75890773	30.7406	Rfx3_Rfx1_Rfx4	ENSMUST00000066408.6|1700016K19Rik|ENSMUSG00000053783.6|RIKEN cDNA 1700016K19 gene
mm39_v1_chrX_+_135894030_135894057	30.4468	Rfx3_Rfx1_Rfx4	ENSMUST00000033804.5|Zcchc18|ENSMUSG00000031428.12|zinc finger, CCHC domain containing 18
mm39_v1_chr9_+_82711859_82711887	30.4361	Rfx3_Rfx1_Rfx4	ENSMUST00000034783.6|Irak1bp1|ENSMUSG00000032251.13|interleukin-1 receptor-associated kinase 1 binding protein 1
mm39_v1_chr8_+_95781722_95781754	30.4084	Rfx3_Rfx1_Rfx4	ENSMUST00000058479.7|Drc7|ENSMUSG00000031786.8|dynein regulatory complex subunit 7
mm39_v1_chr9_-_59260713_59260791	30.1329	Rfx3_Rfx1_Rfx4	ENSMUST00000026265.8|Bbs4|ENSMUSG00000025235.9|Bardet-Biedl syndrome 4 (human)
mm39_v1_chr8_-_4309257_4309284	30.1305	Rfx3_Rfx1_Rfx4	ENSMUST00000053252.9|Ctxn1|ENSMUSG00000048644.9|cortexin 1
mm39_v1_chr7_-_30234481_30234491	30.0195	Rfx3_Rfx1_Rfx4	ENSMUST00000207858.2|Arhgap33|ENSMUSG00000036882.8|Rho GTPase activating protein 33
mm39_v1_chr12_-_84408576_84408612	29.9258	Rfx3_Rfx1_Rfx4	ENSMUST00000021659.2|Fam161b|ENSMUSG00000021234.10|family with sequence similarity 161, member B	ENSMUST00000065536.9|Fam161b|ENSMUSG00000021234.10|family with sequence similarity 161, member B
mm39_v1_chr19_-_4956626_4956661	29.6414	Rfx3_Rfx1_Rfx4	ENSMUST00000237085.2|Bbs1|ENSMUSG00000006464.10|Bardet-Biedl syndrome 1 (human)	ENSMUST00000053506.8|Bbs1|ENSMUSG00000006464.10|Bardet-Biedl syndrome 1 (human)	ENSMUST00000238170.2|Bbs1|ENSMUSG00000006464.10|Bardet-Biedl syndrome 1 (human)
mm39_v1_chr3_-_57754901_57755021	29.6347	Rfx3_Rfx1_Rfx4	ENSMUST00000120289.3|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr3_+_94391676_94391717	29.428	Rfx3_Rfx1_Rfx4	ENSMUST00000198384.3|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr4_+_123077286_123077344	29.3881	Rfx3_Rfx1_Rfx4	ENSMUST00000126995.2|Hpcal4|ENSMUSG00000046093.10|hippocalcin-like 4
mm39_v1_chr7_+_138792890_138792909	29.3292	Rfx3_Rfx1_Rfx4	ENSMUST00000016124.15|Lrrc27|ENSMUSG00000015980.15|leucine rich repeat containing 27
mm39_v1_chr11_-_70924288_70924339	29.0508	Rfx3_Rfx1_Rfx4	ENSMUST00000238695.2|6330403K07Rik|ENSMUSG00000018451.8|RIKEN cDNA 6330403K07 gene
mm39_v1_chr6_-_115815373_115815373	28.9813	Rfx3_Rfx1_Rfx4	ENSMUST00000032468.12|Efcab12|ENSMUSG00000030321.16|EF-hand calcium binding domain 12	ENSMUST00000184428.6|Efcab12|ENSMUSG00000030321.16|EF-hand calcium binding domain 12
mm39_v1_chr7_+_139474612_139474770	28.8622	Rfx3_Rfx1_Rfx4	ENSMUST00000053445.18|Kndc1|ENSMUSG00000066129.18|kinase non-catalytic C-lobe domain (KIND) containing 1	ENSMUST00000121839.2|Kndc1|ENSMUSG00000066129.18|kinase non-catalytic C-lobe domain (KIND) containing 1
mm39_v1_chr9_-_70048766_70048860	28.6979	Rfx3_Rfx1_Rfx4	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr17_+_46565116_46565116	28.4567	Rfx3_Rfx1_Rfx4	ENSMUST00000095262.6|Lrrc73|ENSMUSG00000071073.6|leucine rich repeat containing 73
mm39_v1_chr4_-_152561896_152562046	28.3058	Rfx3_Rfx1_Rfx4	ENSMUST00000238738.2|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2	ENSMUST00000162017.3|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2	ENSMUST00000030768.10|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm39_v1_chr7_-_109092834_109092945	28.2981	Rfx3_Rfx1_Rfx4	ENSMUST00000106739.8|Trim66|ENSMUSG00000031026.16|tripartite motif-containing 66
mm39_v1_chr3_+_108498595_108498727	28.2807	Rfx3_Rfx1_Rfx4	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr2_+_152804405_152804430	28.1732	Rfx3_Rfx1_Rfx4	ENSMUST00000099197.9|Ttll9|ENSMUSG00000074673.16|tubulin tyrosine ligase-like family, member 9	ENSMUST00000103155.10|Ttll9|ENSMUSG00000074673.16|tubulin tyrosine ligase-like family, member 9
mm39_v1_chr7_-_6733411_6733429	28.0846	Rfx3_Rfx1_Rfx4	ENSMUST00000239104.2|Peg3|ENSMUSG00000002265.18|paternally expressed 3	ENSMUST00000051209.11|Peg3|ENSMUSG00000002265.18|paternally expressed 3
mm39_v1_chr3_-_54962458_54962476	27.6817	Rfx3_Rfx1_Rfx4	ENSMUST00000199352.2|Ccna1|ENSMUSG00000027793.7|cyclin A1	ENSMUST00000198320.5|Ccna1|ENSMUSG00000027793.7|cyclin A1	ENSMUST00000029368.7|Ccna1|ENSMUSG00000027793.7|cyclin A1
mm39_v1_chr7_+_3352019_3352080	27.6511	Rfx3_Rfx1_Rfx4	ENSMUST00000100301.11|Prkcg|ENSMUSG00000078816.11|protein kinase C, gamma
mm39_v1_chr12_+_52746158_52746186	27.5926	Rfx3_Rfx1_Rfx4	ENSMUST00000095737.5|Akap6|ENSMUSG00000061603.9|A kinase (PRKA) anchor protein 6
mm39_v1_chr19_-_4333061_4333171	27.5888	Rfx3_Rfx1_Rfx4	ENSMUST00000167215.2|Ankrd13d|ENSMUSG00000005986.17|ankyrin repeat domain 13 family, member D	ENSMUST00000056888.13|Ankrd13d|ENSMUSG00000005986.17|ankyrin repeat domain 13 family, member D
mm39_v1_chr11_-_29197222_29197409	27.5835	Rfx3_Rfx1_Rfx4	ENSMUST00000020754.10|Cfap36|ENSMUSG00000020462.15|cilia and flagella associated protein 36
mm39_v1_chr15_+_54609011_54609098	27.5697	Rfx3_Rfx1_Rfx4	ENSMUST00000050027.9|Ccn3|ENSMUSG00000037362.9|cellular communication network factor 3
mm39_v1_chr3_-_57755500_57755519	27.4623	Rfx3_Rfx1_Rfx4	ENSMUST00000066882.10|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr2_-_83771564_83771577	27.3003	Rfx3_Rfx1_Rfx4	ENSMUST00000038223.8|Zswim2|ENSMUSG00000034552.9|zinc finger SWIM-type containing 2	ENSMUST00000152829.2|Zswim2|ENSMUSG00000034552.9|zinc finger SWIM-type containing 2
mm39_v1_chr2_-_127630769_127630820	27.2897	Rfx3_Rfx1_Rfx4	ENSMUST00000028857.14|Nphp1|ENSMUSG00000027378.17|nephronophthisis 1 (juvenile) homolog (human)	ENSMUST00000110357.2|Nphp1|ENSMUSG00000027378.17|nephronophthisis 1 (juvenile) homolog (human)
mm39_v1_chr15_+_30457772_30457856	27.1854	Rfx3_Rfx1_Rfx4	ENSMUST00000228282.2|Ctnnd2|ENSMUSG00000022240.11|catenin (cadherin associated protein), delta 2
mm39_v1_chr5_-_142536720_142536865	27.1834	Rfx3_Rfx1_Rfx4	ENSMUST00000129212.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000110785.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000063635.15|Radil|ENSMUSG00000029576.18|Ras association and DIL domains
mm39_v1_chr7_+_6733561_6733645	26.9822	Rfx3_Rfx1_Rfx4	ENSMUST00000200535.6|Usp29|ENSMUSG00000051527.12|ubiquitin specific peptidase 29
mm39_v1_chr1_+_21021889_21021959	26.9653	Rfx3_Rfx1_Rfx4	ENSMUST00000038447.6|Efhc1|ENSMUSG00000041809.6|EF-hand domain (C-terminal) containing 1
mm39_v1_chr11_-_67856457_67856489	26.8826	Rfx3_Rfx1_Rfx4	ENSMUST00000021287.12|Cfap52|ENSMUSG00000020904.12|cilia and flagella associated protein 52	ENSMUST00000126766.2|Cfap52|ENSMUSG00000020904.12|cilia and flagella associated protein 52
mm39_v1_chr8_-_27692570_27692584	26.7895	Rfx3_Rfx1_Rfx4	ENSMUST00000038174.8|Got1l1|ENSMUSG00000039720.8|glutamic-oxaloacetic transaminase 1-like 1
mm39_v1_chr4_-_118477960_118477988	26.7804	Rfx3_Rfx1_Rfx4	ENSMUST00000071972.11|Cfap57|ENSMUSG00000028730.15|cilia and flagella associated protein 57
mm39_v1_chr14_-_119160497_119160579	26.7688	Rfx3_Rfx1_Rfx4	ENSMUST00000047208.12|Dzip1|ENSMUSG00000042156.17|DAZ interacting protein 1
mm39_v1_chr13_-_48746836_48746881	26.511	Rfx3_Rfx1_Rfx4	ENSMUST00000238995.2|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr7_-_30750856_30750911	26.1415	Rfx3_Rfx1_Rfx4	ENSMUST00000073892.6|Fxyd7|ENSMUSG00000036578.8|FXYD domain-containing ion transport regulator 7
mm39_v1_chr4_+_137408975_137409031	25.9328	Rfx3_Rfx1_Rfx4	ENSMUST00000047243.12|Rap1gap|ENSMUSG00000041351.17|Rap1 GTPase-activating protein
mm39_v1_chr5_-_49046874_49046899	25.6777	Rfx3_Rfx1_Rfx4	ENSMUST00000176978.8|Kcnip4|ENSMUSG00000029088.17|Kv channel interacting protein 4
mm39_v1_chr18_-_32082624_32082689	25.6749	Rfx3_Rfx1_Rfx4	ENSMUST00000064016.6|Gpr17|ENSMUSG00000052229.6|G protein-coupled receptor 17
mm39_v1_chr7_+_3352159_3352170	25.5809	Rfx3_Rfx1_Rfx4	ENSMUST00000172109.4|Prkcg|ENSMUSG00000078816.11|protein kinase C, gamma
mm39_v1_chr11_+_51895018_51895162	25.3575	Rfx3_Rfx1_Rfx4	ENSMUST00000109079.9|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000063303.11|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000109077.9|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000109080.9|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000109081.9|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000121591.8|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000109078.8|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000063321.13|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000135076.8|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3	ENSMUST00000120374.8|Cdkl3|ENSMUSG00000020389.20|cyclin-dependent kinase-like 3
mm39_v1_chr12_+_84455813_84455876	25.1922	Rfx3_Rfx1_Rfx4	ENSMUST00000081828.13|Bbof1|ENSMUSG00000057265.14|basal body orientation factor 1
mm39_v1_chr1_-_186947618_186947648	25.1452	Rfx3_Rfx1_Rfx4	ENSMUST00000110945.4|Spata17|ENSMUSG00000026611.18|spermatogenesis associated 17	ENSMUST00000183931.8|Spata17|ENSMUSG00000026611.18|spermatogenesis associated 17	ENSMUST00000027908.13|Spata17|ENSMUSG00000026611.18|spermatogenesis associated 17
mm39_v1_chr5_+_66417488_66417655	25.0494	Rfx3_Rfx1_Rfx4	ENSMUST00000031109.7|Nsun7|ENSMUSG00000029206.14|NOL1/NOP2/Sun domain family, member 7
mm39_v1_chr8_-_23295603_23295666	24.9228	Rfx3_Rfx1_Rfx4	ENSMUST00000163739.3|Ap3m2|ENSMUSG00000031539.7|adaptor-related protein complex 3, mu 2 subunit	ENSMUST00000210656.2|Ap3m2|ENSMUSG00000031539.7|adaptor-related protein complex 3, mu 2 subunit
mm39_v1_chr5_-_114961521_114961536	24.8586	Rfx3_Rfx1_Rfx4	ENSMUST00000140374.2|1500011B03Rik|ENSMUSG00000072694.9|RIKEN cDNA 1500011B03 gene
mm39_v1_chr5_-_92190489_92190560	24.8213	Rfx3_Rfx1_Rfx4	ENSMUST00000113140.5|Cdkl2|ENSMUSG00000029403.15|cyclin-dependent kinase-like 2 (CDC2-related kinase)	ENSMUST00000113143.8|Cdkl2|ENSMUSG00000029403.15|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm39_v1_chr7_+_98917542_98917627	24.8136	Rfx3_Rfx1_Rfx4	ENSMUST00000107100.3|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6	ENSMUST00000208605.2|Map6|ENSMUSG00000055407.15|microtubule-associated protein 6
mm39_v1_chr15_+_100659622_100659679	24.642	Rfx3_Rfx1_Rfx4	ENSMUST00000023776.13|Slc4a8|ENSMUSG00000023032.13|solute carrier family 4 (anion exchanger), member 8
mm39_v1_chr19_-_10434837_10434922	24.6014	Rfx3_Rfx1_Rfx4	ENSMUST00000171400.4|Lrrc10b|ENSMUSG00000090291.4|leucine rich repeat containing 10B
mm39_v1_chr2_+_136374186_136374207	24.3302	Rfx3_Rfx1_Rfx4	ENSMUST00000121717.2|Ankef1|ENSMUSG00000074771.11|ankyrin repeat and EF-hand domain containing 1
mm39_v1_chr9_-_51013361_51013382	24.3259	Rfx3_Rfx1_Rfx4	ENSMUST00000170947.3|Hoatz|ENSMUSG00000032057.10|HOATZ cilia and flagella associated protein
mm39_v1_chr7_+_43910845_43910927	24.3004	Rfx3_Rfx1_Rfx4	ENSMUST00000124863.4|Gm15517|ENSMUSG00000087376.4|predicted gene 15517
mm39_v1_chr1_+_164103127_164103229	24.2952	Rfx3_Rfx1_Rfx4	ENSMUST00000027867.7|Ccdc181|ENSMUSG00000026578.7|coiled-coil domain containing 181
mm39_v1_chr10_-_103072141_103072189	24.2914	Rfx3_Rfx1_Rfx4	ENSMUST00000123364.2|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1	ENSMUST00000166240.8|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1	ENSMUST00000020043.12|Lrriq1|ENSMUSG00000019892.14|leucine-rich repeats and IQ motif containing 1
mm39_v1_chr8_+_110220614_110220659	24.2746	Rfx3_Rfx1_Rfx4	ENSMUST00000034162.8|Pmfbp1|ENSMUSG00000031727.9|polyamine modulated factor 1 binding protein 1
mm39_v1_chr16_+_44215136_44215193	24.0348	Rfx3_Rfx1_Rfx4	ENSMUST00000099742.9|Cfap44|ENSMUSG00000071550.15|cilia and flagella associated protein 44
mm39_v1_chr7_+_131568167_131568198	23.935	Rfx3_Rfx1_Rfx4	ENSMUST00000045840.5|Gpr26|ENSMUSG00000040125.5|G protein-coupled receptor 26
mm39_v1_chr8_+_70285282_70285362	23.8994	Rfx3_Rfx1_Rfx4	ENSMUST00000131637.9|Pbx4|ENSMUSG00000031860.18|pre B cell leukemia homeobox 4
mm39_v1_chr7_-_30750828_30750847	23.7885	Rfx3_Rfx1_Rfx4	ENSMUST00000206341.2|Fxyd7|ENSMUSG00000036578.8|FXYD domain-containing ion transport regulator 7
mm39_v1_chr3_-_37366567_37366615	23.7733	Rfx3_Rfx1_Rfx4	ENSMUST00000075537.7|Cetn4|ENSMUSG00000045031.19|centrin 4	ENSMUST00000071400.13|Cetn4|ENSMUSG00000045031.19|centrin 4	ENSMUST00000102955.11|Cetn4|ENSMUSG00000045031.19|centrin 4	ENSMUST00000140956.8|Cetn4|ENSMUSG00000045031.19|centrin 4
mm39_v1_chr9_-_24607554_24607603	23.6917	Rfx3_Rfx1_Rfx4	ENSMUST00000133010.4|Dpy19l2|ENSMUSG00000085576.4|dpy-19-like 2 (C. elegans)
mm39_v1_chr15_-_88863210_88863210	23.5443	Rfx3_Rfx1_Rfx4	ENSMUST00000042594.13|Mlc1|ENSMUSG00000035805.14|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	ENSMUST00000109368.2|Mlc1|ENSMUSG00000035805.14|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm39_v1_chr16_-_95993420_95993463	23.5361	Rfx3_Rfx1_Rfx4	ENSMUST00000113804.8|Lca5l|ENSMUSG00000045275.18|Leber congenital amaurosis 5-like	ENSMUST00000054855.14|Lca5l|ENSMUSG00000045275.18|Leber congenital amaurosis 5-like
mm39_v1_chr9_+_47441471_47441671	23.5008	Rfx3_Rfx1_Rfx4	ENSMUST00000114548.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000152459.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000143026.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000085909.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000114547.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000239368.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000214542.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000034581.4|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1
mm39_v1_chr4_-_141742367_141742382	23.4997	Rfx3_Rfx1_Rfx4	ENSMUST00000105780.8|Fhad1|ENSMUSG00000051435.12|forkhead-associated (FHA) phosphopeptide binding domain 1
mm39_v1_chr13_+_55612050_55612132	23.455	Rfx3_Rfx1_Rfx4	ENSMUST00000046533.9|Prr7|ENSMUSG00000034686.9|proline rich 7 (synaptic)
mm39_v1_chr5_+_34140777_34140873	23.4368	Rfx3_Rfx1_Rfx4	ENSMUST00000094869.12|Gm1673|ENSMUSG00000070858.13|predicted gene 1673	ENSMUST00000114383.8|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr19_-_28945194_28945253	23.3812	Rfx3_Rfx1_Rfx4	ENSMUST00000162110.8|Spata6l|ENSMUSG00000064202.16|spermatogenesis associated 6 like
mm39_v1_chr14_+_60615690_60615741	23.2432	Rfx3_Rfx1_Rfx4	ENSMUST00000239079.2|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr1_+_74401267_74401315	23.1618	Rfx3_Rfx1_Rfx4	ENSMUST00000097697.8|Catip|ENSMUSG00000073650.9|ciliogenesis associated TTC17 interacting protein
mm39_v1_chr4_-_117729717_117729756	23.1435	Rfx3_Rfx1_Rfx4	ENSMUST00000171052.8|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24	ENSMUST00000166325.2|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24	ENSMUST00000106422.9|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24
mm39_v1_chr11_+_108477903_108477936	23.1315	Rfx3_Rfx1_Rfx4	ENSMUST00000146912.9|Cep112|ENSMUSG00000020728.18|centrosomal protein 112
mm39_v1_chr16_+_32238520_32238564	23.0896	Rfx3_Rfx1_Rfx4	ENSMUST00000014220.15|Dynlt2b|ENSMUSG00000014075.16|dynein light chain Tctex-type 2B	ENSMUST00000080316.8|Dynlt2b|ENSMUSG00000014075.16|dynein light chain Tctex-type 2B
mm39_v1_chr5_-_148865429_148865480	22.9678	Rfx3_Rfx1_Rfx4	ENSMUST00000149169.3|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1	ENSMUST00000047257.15|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1
mm39_v1_chr9_-_14682300_14682340	22.8541	Rfx3_Rfx1_Rfx4	ENSMUST00000191047.7|1700012B09Rik|ENSMUSG00000031927.10|RIKEN cDNA 1700012B09 gene	ENSMUST00000060330.5|1700012B09Rik|ENSMUSG00000031927.10|RIKEN cDNA 1700012B09 gene
mm39_v1_chr17_+_34848507_34848594	22.8408	Rfx3_Rfx1_Rfx4	ENSMUST00000015620.7|Prrt1|ENSMUSG00000015476.7|proline-rich transmembrane protein 1
mm39_v1_chr19_-_9978987_9978997	22.8071	Rfx3_Rfx1_Rfx4	ENSMUST00000117346.2|Best1|ENSMUSG00000037418.7|bestrophin 1
mm39_v1_chr7_-_83444050_83444095	22.7324	Rfx3_Rfx1_Rfx4	ENSMUST00000011298.14|Cfap161|ENSMUSG00000011154.18|cilia and flagella associated protein 161
mm39_v1_chr9_-_50650663_50650817	22.6296	Rfx3_Rfx1_Rfx4	ENSMUST00000117093.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000121634.8|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr10_-_41894360_41894432	22.5695	Rfx3_Rfx1_Rfx4	ENSMUST00000162405.8|Armc2|ENSMUSG00000071324.12|armadillo repeat containing 2	ENSMUST00000095729.11|Armc2|ENSMUSG00000071324.12|armadillo repeat containing 2	ENSMUST00000161081.2|Armc2|ENSMUSG00000071324.12|armadillo repeat containing 2	ENSMUST00000160262.9|Armc2|ENSMUSG00000071324.12|armadillo repeat containing 2
mm39_v1_chr10_+_106306122_106306228	22.5035	Rfx3_Rfx1_Rfx4	ENSMUST00000029404.17|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	ENSMUST00000217854.2|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm39_v1_chr2_-_28589675_28589700	22.4723	Rfx3_Rfx1_Rfx4	ENSMUST00000124840.2|Spaca9|ENSMUSG00000026809.16|sperm acrosome associated 9
mm39_v1_chr7_-_92286287_92286355	22.4657	Rfx3_Rfx1_Rfx4	ENSMUST00000056106.14|Ankrd42|ENSMUSG00000041343.20|ankyrin repeat domain 42	ENSMUST00000138267.2|Ankrd42|ENSMUSG00000041343.20|ankyrin repeat domain 42	ENSMUST00000118157.8|Ankrd42|ENSMUSG00000041343.20|ankyrin repeat domain 42
mm39_v1_chr5_+_123390149_123390203	22.3085	Rfx3_Rfx1_Rfx4	ENSMUST00000121964.8|Wdr66|ENSMUSG00000029442.19|WD repeat domain 66
mm39_v1_chr2_-_21210151_21210184	22.2744	Rfx3_Rfx1_Rfx4	ENSMUST00000027992.3|Enkur|ENSMUSG00000026679.4|enkurin, TRPC channel interacting protein
mm39_v1_chr7_-_109038282_109038291	22.2482	Rfx3_Rfx1_Rfx4	ENSMUST00000106745.9|Stk33|ENSMUSG00000031027.16|serine/threonine kinase 33	ENSMUST00000090414.11|Stk33|ENSMUSG00000031027.16|serine/threonine kinase 33	ENSMUST00000141210.2|Stk33|ENSMUSG00000031027.16|serine/threonine kinase 33
mm39_v1_chr4_+_135223283_135223302	22.2367	Rfx3_Rfx1_Rfx4	ENSMUST00000063707.3|Stpg1|ENSMUSG00000028801.15|sperm tail PG rich repeat containing 1
mm39_v1_chr2_+_69477552_69477616	22.2155	Rfx3_Rfx1_Rfx4	ENSMUST00000074963.9|Bbs5|ENSMUSG00000063145.11|Bardet-Biedl syndrome 5 (human)	ENSMUST00000112286.9|Bbs5|ENSMUSG00000063145.11|Bardet-Biedl syndrome 5 (human)
mm39_v1_chr12_+_80565764_80565861	22.1221	Rfx3_Rfx1_Rfx4	ENSMUST00000021558.8|Galnt16|ENSMUSG00000021130.9|polypeptide N-acetylgalactosaminyltransferase 16
mm39_v1_chr6_+_128352419_128352466	21.7506	Rfx3_Rfx1_Rfx4	ENSMUST00000130785.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000100926.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000204223.2|Gm44596|ENSMUSG00000108011.2|predicted gene 44596
mm39_v1_chr17_+_80597632_80597711	21.575	Rfx3_Rfx1_Rfx4	ENSMUST00000227729.2|Morn2|ENSMUSG00000045257.11|MORN repeat containing 2	ENSMUST00000061703.10|Morn2|ENSMUSG00000045257.11|MORN repeat containing 2
mm39_v1_chr1_+_83137457_83137502	21.5421	Rfx3_Rfx1_Rfx4	ENSMUST00000065436.10|Daw1|ENSMUSG00000053161.17|dynein assembly factor with WDR repeat domains 1	ENSMUST00000113436.8|Daw1|ENSMUSG00000053161.17|dynein assembly factor with WDR repeat domains 1	ENSMUST00000065403.7|Daw1|ENSMUSG00000053161.17|dynein assembly factor with WDR repeat domains 1
mm39_v1_chr5_+_30868908_30868932	21.5276	Rfx3_Rfx1_Rfx4	ENSMUST00000114729.8|Dpysl5|ENSMUSG00000029168.15|dihydropyrimidinase-like 5
mm39_v1_chr18_-_22983794_22983816	21.4952	Rfx3_Rfx1_Rfx4	ENSMUST00000092015.11|Nol4|ENSMUSG00000041923.16|nucleolar protein 4	ENSMUST00000069215.13|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chr16_+_20514925_20514963	21.4527	Rfx3_Rfx1_Rfx4	ENSMUST00000128273.2|Fam131a|ENSMUSG00000050821.15|family with sequence similarity 131, member A
mm39_v1_chr16_+_49519561_49519667	21.4199	Rfx3_Rfx1_Rfx4	ENSMUST00000046777.11|Ift57|ENSMUSG00000032965.12|intraflagellar transport 57	ENSMUST00000142682.9|Ift57|ENSMUSG00000032965.12|intraflagellar transport 57
mm39_v1_chr4_-_43653539_43653557	21.4056	Rfx3_Rfx1_Rfx4	ENSMUST00000084646.11|Spag8|ENSMUSG00000066196.12|sperm associated antigen 8
mm39_v1_chr5_+_30869193_30869259	21.3914	Rfx3_Rfx1_Rfx4	ENSMUST00000088081.11|Dpysl5|ENSMUSG00000029168.15|dihydropyrimidinase-like 5	ENSMUST00000101442.4|Dpysl5|ENSMUSG00000029168.15|dihydropyrimidinase-like 5
mm39_v1_chr7_+_138793150_138793219	21.3862	Rfx3_Rfx1_Rfx4	ENSMUST00000106104.8|Lrrc27|ENSMUSG00000015980.15|leucine rich repeat containing 27
mm39_v1_chr3_-_105908789_105908829	21.3148	Rfx3_Rfx1_Rfx4	ENSMUST00000066319.8|Pifo|ENSMUSG00000010136.15|primary cilia formation
mm39_v1_chr6_-_77956635_77956691	21.3004	Rfx3_Rfx1_Rfx4	ENSMUST00000161846.8|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2	ENSMUST00000160894.8|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2
mm39_v1_chr6_-_77956499_77956605	21.2336	Rfx3_Rfx1_Rfx4	ENSMUST00000159626.8|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2	ENSMUST00000075340.12|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2	ENSMUST00000162273.2|Ctnna2|ENSMUSG00000063063.13|catenin (cadherin associated protein), alpha 2
mm39_v1_chr4_-_141660390_141660406	21.1242	Rfx3_Rfx1_Rfx4	ENSMUST00000036701.8|Fhad1|ENSMUSG00000051435.12|forkhead-associated (FHA) phosphopeptide binding domain 1
mm39_v1_chr11_-_87249837_87249901	21.0907	Rfx3_Rfx1_Rfx4	ENSMUST00000055438.5|Ppm1e|ENSMUSG00000046442.5|protein phosphatase 1E (PP2C domain containing)
mm39_v1_chr14_-_70866385_70866466	21.0881	Rfx3_Rfx1_Rfx4	ENSMUST00000228824.2|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr8_-_112660363_112660513	21.0392	Rfx3_Rfx1_Rfx4	ENSMUST00000034429.9|Tmem231|ENSMUSG00000031951.9|transmembrane protein 231
mm39_v1_chr2_+_145776697_145776717	20.9656	Rfx3_Rfx1_Rfx4	ENSMUST00000116398.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61	ENSMUST00000126415.8|Cfap61|ENSMUSG00000037143.18|cilia and flagella associated protein 61
mm39_v1_chr7_+_138792919_138792932	20.8848	Rfx3_Rfx1_Rfx4	ENSMUST00000156768.8|Lrrc27|ENSMUSG00000015980.15|leucine rich repeat containing 27
mm39_v1_chr6_-_122316547_122316667	20.8556	Rfx3_Rfx1_Rfx4	ENSMUST00000161210.3|Phc1|ENSMUSG00000040669.15|polyhomeotic 1	ENSMUST00000161054.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1	ENSMUST00000159252.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1	ENSMUST00000161739.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1	ENSMUST00000161149.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr5_-_114952003_114952037	20.7887	Rfx3_Rfx1_Rfx4	ENSMUST00000112160.4|1500011B03Rik|ENSMUSG00000072694.9|RIKEN cDNA 1500011B03 gene
mm39_v1_chr12_-_69837434_69837509	20.7362	Rfx3_Rfx1_Rfx4	ENSMUST00000021377.5|Cdkl1|ENSMUSG00000020990.6|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm39_v1_chr9_-_29323500_29323574	20.7292	Rfx3_Rfx1_Rfx4	ENSMUST00000115237.8|Ntm|ENSMUSG00000059974.11|neurotrimin
mm39_v1_chr15_-_84441977_84442075	20.7259	Rfx3_Rfx1_Rfx4	ENSMUST00000069476.5|Rtl6|ENSMUSG00000055745.5|retrotransposon Gag like 6
mm39_v1_chr7_+_79896121_79896177	20.7228	Rfx3_Rfx1_Rfx4	ENSMUST00000058266.9|Ttll13|ENSMUSG00000045467.14|tubulin tyrosine ligase-like family, member 13
mm39_v1_chr8_-_106223502_106223701	20.6078	Rfx3_Rfx1_Rfx4	ENSMUST00000212303.2|Zdhhc1|ENSMUSG00000039199.7|zinc finger, DHHC domain containing 1
mm39_v1_chr17_+_34823236_34823279	20.5714	Rfx3_Rfx1_Rfx4	ENSMUST00000174041.8|Agpat1|ENSMUSG00000034254.18|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm39_v1_chr13_+_42834989_42835062	20.4968	Rfx3_Rfx1_Rfx4	ENSMUST00000149235.8|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1
mm39_v1_chr2_-_29938841_29938903	20.3891	Rfx3_Rfx1_Rfx4	ENSMUST00000113711.3|Dync2i2|ENSMUSG00000039715.9|dynein 2 intermediate chain 2
mm39_v1_chr17_+_35191661_35191705	20.3324	Rfx3_Rfx1_Rfx4	ENSMUST00000007248.5|Hspa1l|ENSMUSG00000007033.5|heat shock protein 1-like
mm39_v1_chr3_-_75072319_75072362	20.234	Rfx3_Rfx1_Rfx4	ENSMUST00000124618.2|Zbbx|ENSMUSG00000034151.14|zinc finger, B-box domain containing
mm39_v1_chr15_-_79025387_79025469	20.1406	Rfx3_Rfx1_Rfx4	ENSMUST00000187550.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000188562.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190509.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190730.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190959.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000169604.8|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000186053.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene
mm39_v1_chr14_+_13803477_13803536	20.1311	Rfx3_Rfx1_Rfx4	ENSMUST00000102996.4|Cfap20dc|ENSMUSG00000021747.13|CFAP20 domain containing
mm39_v1_chr6_+_115830431_115830596	20.131	Rfx3_Rfx1_Rfx4	ENSMUST00000112925.8|Ift122|ENSMUSG00000030323.14|intraflagellar transport 122	ENSMUST00000038234.13|Ift122|ENSMUSG00000030323.14|intraflagellar transport 122	ENSMUST00000112923.7|Ift122|ENSMUSG00000030323.14|intraflagellar transport 122
mm39_v1_chr2_-_28589641_28589671	20.1192	Rfx3_Rfx1_Rfx4	ENSMUST00000102877.8|Spaca9|ENSMUSG00000026809.16|sperm acrosome associated 9
mm39_v1_chr15_-_79542950_79543001	20.0992	Rfx3_Rfx1_Rfx4	ENSMUST00000109646.9|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A	ENSMUST00000187519.7|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A	ENSMUST00000229064.2|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A
mm39_v1_chr1_-_59158902_59158965	20.0888	Rfx3_Rfx1_Rfx4	ENSMUST00000087475.11|Tmem237|ENSMUSG00000038079.15|transmembrane protein 237
mm39_v1_chr7_+_44078366_44078442	20.0859	Rfx3_Rfx1_Rfx4	ENSMUST00000127790.8|Lrrc4b|ENSMUSG00000047085.15|leucine rich repeat containing 4B
mm39_v1_chr10_-_68377672_68377738	20.0121	Rfx3_Rfx1_Rfx4	ENSMUST00000020103.9|Cabcoco1|ENSMUSG00000019945.11|ciliary associated calcium binding coiled-coil 1
mm39_v1_chr8_+_106554353_106554401	19.9784	Rfx3_Rfx1_Rfx4	ENSMUST00000212566.2|Tsnaxip1|ENSMUSG00000031893.8|translin-associated factor X (Tsnax) interacting protein 1	ENSMUST00000034365.5|Tsnaxip1|ENSMUSG00000031893.8|translin-associated factor X (Tsnax) interacting protein 1
mm39_v1_chr8_+_37460705_37460766	19.7937	Rfx3_Rfx1_Rfx4	ENSMUST00000098825.5|AI429214|ENSMUSG00000074384.5|expressed sequence AI429214
mm39_v1_chr19_+_45549009_45549086	19.7002	Rfx3_Rfx1_Rfx4	ENSMUST00000047057.9|Gm17018|ENSMUSG00000041035.10|predicted gene 17018
mm39_v1_chr9_+_50528608_50528661	19.6537	Rfx3_Rfx1_Rfx4	ENSMUST00000000171.15|Pih1d2|ENSMUSG00000000167.15|PIH1 domain containing 2	ENSMUST00000151197.8|Pih1d2|ENSMUSG00000000167.15|PIH1 domain containing 2
mm39_v1_chr4_+_45890303_45890342	19.5476	Rfx3_Rfx1_Rfx4	ENSMUST00000178561.8|Ccdc180|ENSMUSG00000035539.15|coiled-coil domain containing 180
mm39_v1_chr4_-_43653559_43653594	19.5126	Rfx3_Rfx1_Rfx4	ENSMUST00000107870.3|Spag8|ENSMUSG00000066196.12|sperm associated antigen 8
mm39_v1_chr13_+_25029088_25029167	19.508	Rfx3_Rfx1_Rfx4	ENSMUST00000006893.9|D130043K22Rik|ENSMUSG00000006711.16|RIKEN cDNA D130043K22 gene
mm39_v1_chr1_-_119924920_119924980	19.4731	Rfx3_Rfx1_Rfx4	ENSMUST00000174370.8|Cfap221|ENSMUSG00000036962.13|cilia and flagella associated protein 221	ENSMUST00000174458.2|Cfap221|ENSMUSG00000036962.13|cilia and flagella associated protein 221
mm39_v1_chr2_-_134485936_134485962	19.3534	Rfx3_Rfx1_Rfx4	ENSMUST00000110120.2|Tmx4|ENSMUSG00000034723.12|thioredoxin-related transmembrane protein 4
mm39_v1_chr14_+_77394173_77394265	19.3359	Rfx3_Rfx1_Rfx4	ENSMUST00000022589.9|Enox1|ENSMUSG00000022012.10|ecto-NOX disulfide-thiol exchanger 1
mm39_v1_chr16_-_59459486_59459541	19.303	Rfx3_Rfx1_Rfx4	ENSMUST00000149797.3|Arl6|ENSMUSG00000022722.19|ADP-ribosylation factor-like 6	ENSMUST00000023405.16|Arl6|ENSMUSG00000022722.19|ADP-ribosylation factor-like 6
mm39_v1_chr10_-_62414163_62414230	19.2696	Rfx3_Rfx1_Rfx4	ENSMUST00000162525.8|Kifbp|ENSMUSG00000036955.17|kinesin family binding protein	ENSMUST00000159704.8|Kifbp|ENSMUSG00000036955.17|kinesin family binding protein
mm39_v1_chr13_-_58506890_58506936	19.1704	Rfx3_Rfx1_Rfx4	ENSMUST00000225388.2|Kif27|ENSMUSG00000060176.5|kinesin family member 27
mm39_v1_chr1_-_186947651_186947675	19.1278	Rfx3_Rfx1_Rfx4	ENSMUST00000183819.8|Spata17|ENSMUSG00000026611.18|spermatogenesis associated 17
mm39_v1_chr3_-_54962922_54962940	19.124	Rfx3_Rfx1_Rfx4	ENSMUST00000197238.5|Ccna1|ENSMUSG00000027793.7|cyclin A1
mm39_v1_chr19_-_59932079_59932110	19.0937	Rfx3_Rfx1_Rfx4	ENSMUST00000171986.8|Rab11fip2|ENSMUSG00000040022.15|RAB11 family interacting protein 2 (class I)
mm39_v1_chr2_-_75808508_75808550	19.0675	Rfx3_Rfx1_Rfx4	ENSMUST00000099995.5|Ttc30a2|ENSMUSG00000075272.5|tetratricopeptide repeat domain 30A2
mm39_v1_chr10_-_62414236_62414242	18.9582	Rfx3_Rfx1_Rfx4	ENSMUST00000065887.14|Kifbp|ENSMUSG00000036955.17|kinesin family binding protein
mm39_v1_chr2_-_134486039_134486065	18.9263	Rfx3_Rfx1_Rfx4	ENSMUST00000038228.11|Tmx4|ENSMUSG00000034723.12|thioredoxin-related transmembrane protein 4
mm39_v1_chr8_+_95498822_95498839	18.8568	Rfx3_Rfx1_Rfx4	ENSMUST00000211956.2|Cx3cl1|ENSMUSG00000031778.14|chemokine (C-X3-C motif) ligand 1	ENSMUST00000211947.2|Cx3cl1|ENSMUSG00000031778.14|chemokine (C-X3-C motif) ligand 1
mm39_v1_chr19_-_5452521_5452556	18.8273	Rfx3_Rfx1_Rfx4	ENSMUST00000235569.2|Tsga10ip|ENSMUSG00000039330.6|testis specific 10 interacting protein
mm39_v1_chr7_+_126446588_126446931	18.7105	Rfx3_Rfx1_Rfx4	ENSMUST00000141805.8|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000064110.14|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000205938.2|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000152051.8|Doc2a|ENSMUSG00000052301.15|double C2, alpha
mm39_v1_chr16_-_59459745_59459806	18.6044	Rfx3_Rfx1_Rfx4	ENSMUST00000099646.10|Arl6|ENSMUSG00000022722.19|ADP-ribosylation factor-like 6
mm39_v1_chr12_-_86773160_86773250	18.5706	Rfx3_Rfx1_Rfx4	ENSMUST00000021682.9|Angel1|ENSMUSG00000021257.15|angel homolog 1
mm39_v1_chr11_-_72097821_72097852	18.4878	Rfx3_Rfx1_Rfx4	ENSMUST00000204457.3|Gm43951|ENSMUSG00000107877.3|predicted gene, 43951
mm39_v1_chr7_+_126549692_126549756	18.462	Rfx3_Rfx1_Rfx4	ENSMUST00000106335.8|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2	ENSMUST00000146017.3|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2
mm39_v1_chr17_+_6057868_6057893	18.4614	Rfx3_Rfx1_Rfx4	ENSMUST00000115785.8|Synj2|ENSMUSG00000023805.18|synaptojanin 2
mm39_v1_chr1_+_152626273_152626315	18.4375	Rfx3_Rfx1_Rfx4	ENSMUST00000068875.5|Apobec4|ENSMUSG00000055547.5|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
mm39_v1_chr5_-_140687995_140688133	18.4149	Rfx3_Rfx1_Rfx4	ENSMUST00000135028.5|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000077890.12|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000041783.14|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000142081.6|Iqce|ENSMUSG00000036555.15|IQ motif containing E
mm39_v1_chr17_+_9207180_9207227	18.2144	Rfx3_Rfx1_Rfx4	ENSMUST00000151609.2|1700010I14Rik|ENSMUSG00000023873.14|RIKEN cDNA 1700010I14 gene	ENSMUST00000232775.2|1700010I14Rik|ENSMUSG00000023873.14|RIKEN cDNA 1700010I14 gene	ENSMUST00000136954.3|1700010I14Rik|ENSMUSG00000023873.14|RIKEN cDNA 1700010I14 gene
mm39_v1_chr3_+_124114504_124114504	18.2095	Rfx3_Rfx1_Rfx4	ENSMUST00000058994.6|Tram1l1|ENSMUSG00000044528.6|translocation associated membrane protein 1-like 1
mm39_v1_chr2_-_134485999_134486034	18.1068	Rfx3_Rfx1_Rfx4	ENSMUST00000110119.2|Tmx4|ENSMUSG00000034723.12|thioredoxin-related transmembrane protein 4
mm39_v1_chr12_-_84195222_84195273	18.0917	Rfx3_Rfx1_Rfx4	ENSMUST00000061425.3|Pnma1|ENSMUSG00000054383.3|paraneoplastic antigen MA1
mm39_v1_chr11_-_114686712_114686729	18.0754	Rfx3_Rfx1_Rfx4	ENSMUST00000000206.4|Btbd17|ENSMUSG00000000202.10|BTB (POZ) domain containing 17
mm39_v1_chr6_+_126830102_126830123	18.0569	Rfx3_Rfx1_Rfx4	ENSMUST00000202878.4|Akap3|ENSMUSG00000030344.12|A kinase (PRKA) anchor protein 3	ENSMUST00000202574.2|Akap3|ENSMUSG00000030344.12|A kinase (PRKA) anchor protein 3
mm39_v1_chr5_-_21629661_21629684	18.0199	Rfx3_Rfx1_Rfx4	ENSMUST00000115245.8|Ccdc146|ENSMUSG00000064280.15|coiled-coil domain containing 146	ENSMUST00000030552.7|Ccdc146|ENSMUSG00000064280.15|coiled-coil domain containing 146
mm39_v1_chr16_+_38722666_38722678	17.858	Rfx3_Rfx1_Rfx4	ENSMUST00000023478.8|Igsf11|ENSMUSG00000022790.15|immunoglobulin superfamily, member 11
mm39_v1_chr2_-_118087401_118087467	17.8098	Rfx3_Rfx1_Rfx4	ENSMUST00000231133.2|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1	ENSMUST00000028820.7|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1	ENSMUST00000028821.10|Fsip1|ENSMUSG00000027344.15|fibrous sheath-interacting protein 1
mm39_v1_chr11_+_8998575_8998633	17.7778	Rfx3_Rfx1_Rfx4	ENSMUST00000043285.5|Gm11992|ENSMUSG00000040978.5|predicted gene 11992
mm39_v1_chr7_-_28913382_28913458	17.7023	Rfx3_Rfx1_Rfx4	ENSMUST00000169143.8|Catsperg1|ENSMUSG00000049676.15|cation channel sperm associated auxiliary subunit gamma 1	ENSMUST00000047846.13|Catsperg1|ENSMUSG00000049676.15|cation channel sperm associated auxiliary subunit gamma 1
mm39_v1_chr6_-_121107953_121107964	17.6631	Rfx3_Rfx1_Rfx4	ENSMUST00000204248.2|Mical3|ENSMUSG00000051586.18|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm39_v1_chr9_+_43978290_43978319	17.6218	Rfx3_Rfx1_Rfx4	ENSMUST00000034508.14|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chr1_+_75498162_75498247	17.6004	Rfx3_Rfx1_Rfx4	ENSMUST00000027414.16|Stk11ip|ENSMUSG00000026213.16|serine/threonine kinase 11 interacting protein	ENSMUST00000113553.2|Stk11ip|ENSMUSG00000026213.16|serine/threonine kinase 11 interacting protein
mm39_v1_chr7_+_126549859_126549901	17.5698	Rfx3_Rfx1_Rfx4	ENSMUST00000106333.8|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2
mm39_v1_chr2_+_119803230_119803384	17.5002	Rfx3_Rfx1_Rfx4	ENSMUST00000229024.2|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr5_+_136937083_136937097	17.464	Rfx3_Rfx1_Rfx4	ENSMUST00000008131.10|Ift22|ENSMUSG00000007987.13|intraflagellar transport 22
mm39_v1_chr5_+_34140877_34140892	17.4277	Rfx3_Rfx1_Rfx4	ENSMUST00000114382.2|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr2_-_131001916_131002001	17.4032	Rfx3_Rfx1_Rfx4	ENSMUST00000103188.10|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene	ENSMUST00000133602.8|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene	ENSMUST00000028800.12|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene
mm39_v1_chr9_-_15539193_15539229	17.2414	Rfx3_Rfx1_Rfx4	ENSMUST00000045513.13|Deup1|ENSMUSG00000039977.17|deuterosome assembly protein 1	ENSMUST00000152377.2|Deup1|ENSMUSG00000039977.17|deuterosome assembly protein 1	ENSMUST00000115593.10|Deup1|ENSMUSG00000039977.17|deuterosome assembly protein 1
mm39_v1_chr7_+_143792455_143792467	17.0228	Rfx3_Rfx1_Rfx4	ENSMUST00000239495.2|Shank2|ENSMUSG00000037541.23|SH3 and multiple ankyrin repeat domains 2
mm39_v1_chr19_+_47167259_47167436	17.0225	Rfx3_Rfx1_Rfx4	ENSMUST00000111808.11|Neurl1a|ENSMUSG00000006435.17|neuralized E3 ubiquitin protein ligase 1A
mm39_v1_chr3_-_127019496_127019608	16.9278	Rfx3_Rfx1_Rfx4	ENSMUST00000182064.9|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain	ENSMUST00000182452.8|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain
mm39_v1_chr13_+_43769186_43769262	16.897	Rfx3_Rfx1_Rfx4	ENSMUST00000059986.3|Rnf182|ENSMUSG00000044164.3|ring finger protein 182
mm39_v1_chr11_+_69920956_69920981	16.7886	Rfx3_Rfx1_Rfx4	ENSMUST00000232115.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr7_-_29426425_29426440	16.7382	Rfx3_Rfx1_Rfx4	ENSMUST00000061193.4|Catsperg2|ENSMUSG00000049123.11|cation channel sperm associated auxiliary subunit gamma 2
mm39_v1_chr5_-_114961501_114961518	16.7022	Rfx3_Rfx1_Rfx4	ENSMUST00000100850.6|1500011B03Rik|ENSMUSG00000072694.9|RIKEN cDNA 1500011B03 gene
mm39_v1_chr12_-_110807330_110807385	16.6772	Rfx3_Rfx1_Rfx4	ENSMUST00000177224.2|Mok|ENSMUSG00000056458.17|MOK protein kinase	ENSMUST00000084974.11|Mok|ENSMUSG00000056458.17|MOK protein kinase	ENSMUST00000070565.15|Mok|ENSMUSG00000056458.17|MOK protein kinase
mm39_v1_chr3_+_82265351_82265417	16.4502	Rfx3_Rfx1_Rfx4	ENSMUST00000193559.6|Map9|ENSMUSG00000033900.14|microtubule-associated protein 9	ENSMUST00000192595.6|Map9|ENSMUSG00000033900.14|microtubule-associated protein 9	ENSMUST00000091014.10|Map9|ENSMUSG00000033900.14|microtubule-associated protein 9
mm39_v1_chr2_+_32519479_32519527	16.402	Rfx3_Rfx1_Rfx4	ENSMUST00000068271.5|Ak1|ENSMUSG00000026817.15|adenylate kinase 1
mm39_v1_chr7_+_6733684_6733740	16.3697	Rfx3_Rfx1_Rfx4	ENSMUST00000197117.5|Usp29|ENSMUSG00000051527.12|ubiquitin specific peptidase 29
mm39_v1_chr19_+_4889394_4889511	16.3362	Rfx3_Rfx1_Rfx4	ENSMUST00000088653.3|Ccdc87|ENSMUSG00000067872.3|coiled-coil domain containing 87
mm39_v1_chr11_-_4110286_4110304	16.317	Rfx3_Rfx1_Rfx4	ENSMUST00000093381.11|Ccdc157|ENSMUSG00000051427.15|coiled-coil domain containing 157	ENSMUST00000101626.9|Ccdc157|ENSMUSG00000051427.15|coiled-coil domain containing 157
mm39_v1_chr1_-_133681419_133681595	16.3036	Rfx3_Rfx1_Rfx4	ENSMUST00000125659.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4	ENSMUST00000048953.14|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4	ENSMUST00000165602.9|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr19_-_46314945_46315047	16.2954	Rfx3_Rfx1_Rfx4	ENSMUST00000225781.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000223903.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr9_-_63509699_63509742	16.2718	Rfx3_Rfx1_Rfx4	ENSMUST00000171243.2|Iqch|ENSMUSG00000037801.14|IQ motif containing H	ENSMUST00000163982.8|Iqch|ENSMUSG00000037801.14|IQ motif containing H	ENSMUST00000163624.8|Iqch|ENSMUSG00000037801.14|IQ motif containing H
mm39_v1_chr17_-_85397627_85397703	16.2079	Rfx3_Rfx1_Rfx4	ENSMUST00000072406.5|Prepl|ENSMUSG00000024127.16|prolyl endopeptidase-like	ENSMUST00000171795.9|Prepl|ENSMUSG00000024127.16|prolyl endopeptidase-like	ENSMUST00000234676.2|Prepl|ENSMUSG00000024127.16|prolyl endopeptidase-like
mm39_v1_chr9_-_72399221_72399494	16.206	Rfx3_Rfx1_Rfx4	ENSMUST00000185151.8|Tex9|ENSMUSG00000090626.10|testis expressed gene 9	ENSMUST00000085358.12|Tex9|ENSMUSG00000090626.10|testis expressed gene 9	ENSMUST00000184125.8|Tex9|ENSMUSG00000090626.10|testis expressed gene 9	ENSMUST00000183574.8|Tex9|ENSMUSG00000090626.10|testis expressed gene 9	ENSMUST00000184831.8|Tex9|ENSMUSG00000090626.10|testis expressed gene 9
mm39_v1_chr7_+_126550009_126550138	16.2024	Rfx3_Rfx1_Rfx4	ENSMUST00000106332.3|Sez6l2|ENSMUSG00000030683.12|seizure related 6 homolog like 2
mm39_v1_chr7_-_126574959_126575095	16.1957	Rfx3_Rfx1_Rfx4	ENSMUST00000206296.2|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand	ENSMUST00000205437.3|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand
mm39_v1_chr12_-_72231802_72231807	16.1931	Rfx3_Rfx1_Rfx4	ENSMUST00000021494.6|Ccdc175|ENSMUSG00000021086.6|coiled-coil domain containing 175
mm39_v1_chr6_-_146855880_146855928	16.1695	Rfx3_Rfx1_Rfx4	ENSMUST00000111622.2|1700034J05Rik|ENSMUSG00000040163.15|RIKEN cDNA 1700034J05 gene	ENSMUST00000036592.15|1700034J05Rik|ENSMUSG00000040163.15|RIKEN cDNA 1700034J05 gene
mm39_v1_chr2_-_118534444_118534444	16.158	Rfx3_Rfx1_Rfx4	ENSMUST00000104937.2|Ankrd63|ENSMUSG00000078137.2|ankyrin repeat domain 63
mm39_v1_chr5_-_115791032_115791051	16.0789	Rfx3_Rfx1_Rfx4	ENSMUST00000121746.8|Bicdl1|ENSMUSG00000041609.17|BICD family like cargo adaptor 1	ENSMUST00000118576.8|Bicdl1|ENSMUSG00000041609.17|BICD family like cargo adaptor 1
mm39_v1_chr10_+_111896087_111896113	16.0339	Rfx3_Rfx1_Rfx4	ENSMUST00000073617.5|Glipr1l1|ENSMUSG00000020213.7|GLI pathogenesis-related 1 like 1
mm39_v1_chr3_+_82265474_82265494	15.9148	Rfx3_Rfx1_Rfx4	ENSMUST00000195471.6|Map9|ENSMUSG00000033900.14|microtubule-associated protein 9	ENSMUST00000195640.2|Map9|ENSMUSG00000033900.14|microtubule-associated protein 9
mm39_v1_chr6_+_34757346_34757413	15.8489	Rfx3_Rfx1_Rfx4	ENSMUST00000115016.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3	ENSMUST00000115017.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3
mm39_v1_chrX_+_135491587_135491618	15.8215	Rfx3_Rfx1_Rfx4	ENSMUST00000138047.8|Tceal3|ENSMUSG00000044550.12|transcription elongation factor A (SII)-like 3	ENSMUST00000145648.8|Tceal3|ENSMUSG00000044550.12|transcription elongation factor A (SII)-like 3
mm39_v1_chr16_+_3726665_3726970	15.772	Rfx3_Rfx1_Rfx4	ENSMUST00000145150.9|Cluap1|ENSMUSG00000014232.15|clusterin associated protein 1	ENSMUST00000040881.14|Cluap1|ENSMUSG00000014232.15|clusterin associated protein 1	ENSMUST00000124849.2|Cluap1|ENSMUSG00000014232.15|clusterin associated protein 1
mm39_v1_chr10_+_80905869_80905880	15.7529	Rfx3_Rfx1_Rfx4	ENSMUST00000005057.7|Thop1|ENSMUSG00000004929.13|thimet oligopeptidase 1
mm39_v1_chr17_+_9207165_9207179	15.708	Rfx3_Rfx1_Rfx4	ENSMUST00000024650.12|1700010I14Rik|ENSMUSG00000023873.14|RIKEN cDNA 1700010I14 gene
mm39_v1_chr10_-_109669053_109669082	15.5472	Rfx3_Rfx1_Rfx4	ENSMUST00000238286.2|Nav3|ENSMUSG00000020181.19|neuron navigator 3
mm39_v1_chr12_-_110649040_110649056	15.483	Rfx3_Rfx1_Rfx4	ENSMUST00000222915.2|1700001K19Rik|ENSMUSG00000056508.7|RIKEN cDNA 1700001K19 gene	ENSMUST00000070659.7|1700001K19Rik|ENSMUSG00000056508.7|RIKEN cDNA 1700001K19 gene
mm39_v1_chrX_+_47712614_47712666	15.4448	Rfx3_Rfx1_Rfx4	ENSMUST00000114936.8|Slc25a14|ENSMUSG00000031105.17|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm39_v1_chr2_+_38888312_38888353	15.4071	Rfx3_Rfx1_Rfx4	ENSMUST00000112872.2|Wdr38|ENSMUSG00000035295.11|WD repeat domain 38
mm39_v1_chr9_+_107805647_107805684	15.3741	Rfx3_Rfx1_Rfx4	ENSMUST00000085073.2|Actl11|ENSMUSG00000066368.2|actin-like 11
mm39_v1_chr4_-_12171971_12172021	15.3342	Rfx3_Rfx1_Rfx4	ENSMUST00000087052.11|Cibar1|ENSMUSG00000028218.20|CBY1 interacting BAR domain containing 1	ENSMUST00000108285.9|Cibar1|ENSMUSG00000028218.20|CBY1 interacting BAR domain containing 1	ENSMUST00000177837.8|Cibar1|ENSMUSG00000028218.20|CBY1 interacting BAR domain containing 1
mm39_v1_chr11_-_118233326_118233395	15.3057	Rfx3_Rfx1_Rfx4	ENSMUST00000103024.4|Cep295nl|ENSMUSG00000076433.5|CEP295 N-terminal like
mm39_v1_chr8_+_95393349_95393397	15.2733	Rfx3_Rfx1_Rfx4	ENSMUST00000109527.6|Arl2bp|ENSMUSG00000031776.18|ADP-ribosylation factor-like 2 binding protein
mm39_v1_chr5_-_30703180_30703195	15.2058	Rfx3_Rfx1_Rfx4	ENSMUST00000065486.3|Cib4|ENSMUSG00000053194.3|calcium and integrin binding family member 4
mm39_v1_chr1_+_86082474_86082544	15.1355	Rfx3_Rfx1_Rfx4	ENSMUST00000113309.9|Armc9|ENSMUSG00000062590.14|armadillo repeat containing 9	ENSMUST00000186509.7|Armc9|ENSMUSG00000062590.14|armadillo repeat containing 9	ENSMUST00000027434.15|Armc9|ENSMUSG00000062590.14|armadillo repeat containing 9	ENSMUST00000131412.8|Armc9|ENSMUSG00000062590.14|armadillo repeat containing 9
mm39_v1_chr15_-_103123711_103123793	15.132	Rfx3_Rfx1_Rfx4	ENSMUST00000122182.2|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000108813.10|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000127191.2|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr3_+_99792699_99792735	15.0626	Rfx3_Rfx1_Rfx4	ENSMUST00000164539.2|Spag17|ENSMUSG00000027867.11|sperm associated antigen 17
mm39_v1_chr3_+_103875574_103875762	15.0336	Rfx3_Rfx1_Rfx4	ENSMUST00000063717.14|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1	ENSMUST00000055425.15|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1	ENSMUST00000123611.8|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1	ENSMUST00000090685.11|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1
mm39_v1_chr17_+_84933872_84933940	15.0067	Rfx3_Rfx1_Rfx4	ENSMUST00000025101.10|Dync2li1|ENSMUSG00000024253.10|dynein cytoplasmic 2 light intermediate chain 1
mm39_v1_chr16_-_38162174_38162220	14.9487	Rfx3_Rfx1_Rfx4	ENSMUST00000114740.3|Cfap91|ENSMUSG00000022805.18|cilia and flagella associated protein 91
mm39_v1_chr5_+_3621673_3621692	14.887	Rfx3_Rfx1_Rfx4	ENSMUST00000008451.12|1700109H08Rik|ENSMUSG00000008307.12|RIKEN cDNA 1700109H08 gene
mm39_v1_chr10_-_79710468_79710492	14.8483	Rfx3_Rfx1_Rfx4	ENSMUST00000092325.11|Plppr3|ENSMUSG00000035835.15|phospholipid phosphatase related 3
mm39_v1_chr12_+_72488625_72488640	14.8463	Rfx3_Rfx1_Rfx4	ENSMUST00000161284.3|Lrrc9|ENSMUSG00000021090.17|leucine rich repeat containing 9	ENSMUST00000162159.8|Lrrc9|ENSMUSG00000021090.17|leucine rich repeat containing 9
mm39_v1_chr6_+_126830050_126830079	14.7929	Rfx3_Rfx1_Rfx4	ENSMUST00000095440.9|Akap3|ENSMUSG00000030344.12|A kinase (PRKA) anchor protein 3
mm39_v1_chr7_-_83444026_83444049	14.7634	Rfx3_Rfx1_Rfx4	ENSMUST00000119134.8|Cfap161|ENSMUSG00000011154.18|cilia and flagella associated protein 161
mm39_v1_chr4_-_102971434_102971496	14.7617	Rfx3_Rfx1_Rfx4	ENSMUST00000036557.15|Dnai4|ENSMUSG00000035126.20|dynein axonemal intermediate chain 4	ENSMUST00000036451.15|Dnai4|ENSMUSG00000035126.20|dynein axonemal intermediate chain 4
mm39_v1_chr17_+_80514889_80514946	14.6322	Rfx3_Rfx1_Rfx4	ENSMUST00000134652.2|Ttc39d|ENSMUSG00000046196.5|tetratricopeptide repeat domain 39D
mm39_v1_chr19_-_42074777_42074813	14.6268	Rfx3_Rfx1_Rfx4	ENSMUST00000051772.10|Morn4|ENSMUSG00000049670.10|MORN repeat containing 4
mm39_v1_chr2_+_180861804_180861851	14.5602	Rfx3_Rfx1_Rfx4	ENSMUST00000050026.7|Fndc11|ENSMUSG00000047841.9|fibronectin type III domain containing 11	ENSMUST00000108835.2|Fndc11|ENSMUSG00000047841.9|fibronectin type III domain containing 11
mm39_v1_chr11_-_3845085_3845104	14.5591	Rfx3_Rfx1_Rfx4	ENSMUST00000020712.5|4921536K21Rik|ENSMUSG00000020434.5|RIKEN cDNA 4921536K21 gene
mm39_v1_chr7_+_108549545_108549696	14.4356	Rfx3_Rfx1_Rfx4	ENSMUST00000207583.2|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr2_+_119803180_119803228	14.4062	Rfx3_Rfx1_Rfx4	ENSMUST00000066058.8|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr11_-_105835238_105835345	14.3949	Rfx3_Rfx1_Rfx4	ENSMUST00000019734.11|Cyb561|ENSMUSG00000019590.17|cytochrome b-561	ENSMUST00000184269.3|Cyb561|ENSMUSG00000019590.17|cytochrome b-561	ENSMUST00000150563.3|Cyb561|ENSMUSG00000019590.17|cytochrome b-561
mm39_v1_chr8_-_26087475_26087533	14.2495	Rfx3_Rfx1_Rfx4	ENSMUST00000210810.2|Letm2|ENSMUSG00000037363.10|leucine zipper-EF-hand containing transmembrane protein 2	ENSMUST00000210616.2|Letm2|ENSMUSG00000037363.10|leucine zipper-EF-hand containing transmembrane protein 2	ENSMUST00000079160.8|Letm2|ENSMUSG00000037363.10|leucine zipper-EF-hand containing transmembrane protein 2
mm39_v1_chr6_+_30509826_30509891	14.2493	Rfx3_Rfx1_Rfx4	ENSMUST00000031797.11|Ssmem1|ENSMUSG00000029784.14|serine-rich single-pass membrane protein 1
mm39_v1_chr6_+_34006356_34006401	14.2292	Rfx3_Rfx1_Rfx4	ENSMUST00000228187.2|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing	ENSMUST00000070189.10|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing	ENSMUST00000101564.9|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing
mm39_v1_chrX_+_6933733_6933774	14.2037	Rfx3_Rfx1_Rfx4	ENSMUST00000057101.13|Akap4|ENSMUSG00000050089.14|A kinase (PRKA) anchor protein 4	ENSMUST00000115750.8|Akap4|ENSMUSG00000050089.14|A kinase (PRKA) anchor protein 4
mm39_v1_chr15_-_101778130_101778147	14.1699	Rfx3_Rfx1_Rfx4	ENSMUST00000087996.7|Krt77|ENSMUSG00000067594.7|keratin 77
mm39_v1_chr9_-_54408780_54408928	14.1635	Rfx3_Rfx1_Rfx4	ENSMUST00000118600.8|Dmxl2|ENSMUSG00000041268.18|Dmx-like 2	ENSMUST00000118163.8|Dmxl2|ENSMUSG00000041268.18|Dmx-like 2
mm39_v1_chr9_+_43978369_43978432	14.0115	Rfx3_Rfx1_Rfx4	ENSMUST00000177054.8|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chr7_-_89914610_89914652	13.9607	Rfx3_Rfx1_Rfx4	ENSMUST00000107221.9|Ccdc83|ENSMUSG00000030617.14|coiled-coil domain containing 83	ENSMUST00000107220.8|Ccdc83|ENSMUSG00000030617.14|coiled-coil domain containing 83	ENSMUST00000040413.2|Ccdc83|ENSMUSG00000030617.14|coiled-coil domain containing 83
mm39_v1_chr11_+_119119925_119119961	13.9516	Rfx3_Rfx1_Rfx4	ENSMUST00000053440.8|Ccdc40|ENSMUSG00000039963.21|coiled-coil domain containing 40
mm39_v1_chr9_-_21913896_21913936	13.9458	Rfx3_Rfx1_Rfx4	ENSMUST00000044926.6|Odad3|ENSMUSG00000039632.14|outer dynein arm docking complex subunit 3
mm39_v1_chr11_-_65636651_65636669	13.8787	Rfx3_Rfx1_Rfx4	ENSMUST00000138093.2|Map2k4|ENSMUSG00000033352.12|mitogen-activated protein kinase kinase 4
mm39_v1_chr6_+_55180366_55180444	13.87	Rfx3_Rfx1_Rfx4	ENSMUST00000204842.3|Mindy4|ENSMUSG00000038022.12|MINDY lysine 48 deubiquitinase 4	ENSMUST00000053094.8|Mindy4|ENSMUSG00000038022.12|MINDY lysine 48 deubiquitinase 4
mm39_v1_chr2_+_29780073_29780096	13.8251	Rfx3_Rfx1_Rfx4	ENSMUST00000028128.13|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chr8_+_46080746_46080791	13.7782	Rfx3_Rfx1_Rfx4	ENSMUST00000145458.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000134321.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chrX_+_47712676_47712839	13.7389	Rfx3_Rfx1_Rfx4	ENSMUST00000177710.2|Slc25a14|ENSMUSG00000031105.17|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm39_v1_chr2_+_164664920_164664961	13.7166	Rfx3_Rfx1_Rfx4	ENSMUST00000132282.2|Zswim1|ENSMUSG00000017764.3|zinc finger SWIM-type containing 1
mm39_v1_chr17_-_87754282_87754363	13.6531	Rfx3_Rfx1_Rfx4	ENSMUST00000234406.2|Calm2|ENSMUSG00000036438.15|calmodulin 2	ENSMUST00000040440.7|Calm2|ENSMUSG00000036438.15|calmodulin 2
mm39_v1_chr5_+_30972067_30972120	13.539	Rfx3_Rfx1_Rfx4	ENSMUST00000200692.4|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
mm39_v1_chr4_-_138452517_138452576	13.4952	Rfx3_Rfx1_Rfx4	ENSMUST00000105811.9|Ubxn10|ENSMUSG00000043621.14|UBX domain protein 10
mm39_v1_chr3_-_84212677_84212764	13.4203	Rfx3_Rfx1_Rfx4	ENSMUST00000122849.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2	ENSMUST00000132283.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr3_-_54962899_54962911	13.3615	Rfx3_Rfx1_Rfx4	ENSMUST00000199144.5|Ccna1|ENSMUSG00000027793.7|cyclin A1
mm39_v1_chr10_+_33780993_33781107	13.2867	Rfx3_Rfx1_Rfx4	ENSMUST00000169670.8|Rsph4a|ENSMUSG00000039552.15|radial spoke head 4 homolog A (Chlamydomonas)
mm39_v1_chr10_-_79710067_79710273	13.1545	Rfx3_Rfx1_Rfx4	ENSMUST00000166023.2|Plppr3|ENSMUSG00000035835.15|phospholipid phosphatase related 3	ENSMUST00000167707.2|Plppr3|ENSMUSG00000035835.15|phospholipid phosphatase related 3	ENSMUST00000165601.8|Plppr3|ENSMUSG00000035835.15|phospholipid phosphatase related 3
mm39_v1_chr11_-_72098239_72098313	13.1366	Rfx3_Rfx1_Rfx4	ENSMUST00000238653.2|4933427D14Rik|ENSMUSG00000020807.16|RIKEN cDNA 4933427D14 gene	ENSMUST00000108505.2|4933427D14Rik|ENSMUSG00000020807.16|RIKEN cDNA 4933427D14 gene
mm39_v1_chr4_-_92035446_92035471	13.0551	Rfx3_Rfx1_Rfx4	ENSMUST00000107108.8|Izumo3|ENSMUSG00000028533.11|IZUMO family member 3	ENSMUST00000143542.2|Izumo3|ENSMUSG00000028533.11|IZUMO family member 3
mm39_v1_chr18_-_46331877_46331891	13.0072	Rfx3_Rfx1_Rfx4	ENSMUST00000167364.9|Trim36|ENSMUSG00000033949.13|tripartite motif-containing 36
mm39_v1_chr11_+_101443014_101443060	12.981	Rfx3_Rfx1_Rfx4	ENSMUST00000147239.8|Nbr1|ENSMUSG00000017119.21|NBR1, autophagy cargo receptor
mm39_v1_chr11_+_101358990_101359001	12.9577	Rfx3_Rfx1_Rfx4	ENSMUST00000001347.7|Rnd2|ENSMUSG00000001313.13|Rho family GTPase 2
mm39_v1_chr5_+_136937035_136937056	12.9102	Rfx3_Rfx1_Rfx4	ENSMUST00000199101.5|Ift22|ENSMUSG00000007987.13|intraflagellar transport 22	ENSMUST00000200153.5|Ift22|ENSMUSG00000007987.13|intraflagellar transport 22
mm39_v1_chr16_-_90866032_90866081	12.8617	Rfx3_Rfx1_Rfx4	ENSMUST00000035689.8|4932438H23Rik|ENSMUSG00000039851.12|RIKEN cDNA 4932438H23 gene	ENSMUST00000114076.2|4932438H23Rik|ENSMUSG00000039851.12|RIKEN cDNA 4932438H23 gene
mm39_v1_chr9_-_27066685_27066723	12.7349	Rfx3_Rfx1_Rfx4	ENSMUST00000034472.16|Jam3|ENSMUSG00000031990.16|junction adhesion molecule 3
mm39_v1_chrX_+_149981074_149981136	12.7209	Rfx3_Rfx1_Rfx4	ENSMUST00000184730.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000184392.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000096285.5|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3
mm39_v1_chr10_-_111996226_111996235	12.6948	Rfx3_Rfx1_Rfx4	ENSMUST00000220085.2|Glipr1l3|ENSMUSG00000112611.2|GLI pathogenesis-related 1 like 3
mm39_v1_chr19_-_41884599_41884646	12.6884	Rfx3_Rfx1_Rfx4	ENSMUST00000038677.5|Rrp12|ENSMUSG00000035049.5|ribosomal RNA processing 12 homolog
mm39_v1_chr1_+_59563453_59563453	12.6681	Rfx3_Rfx1_Rfx4	ENSMUST00000186434.3|Gm973|ENSMUSG00000047361.17|predicted gene 973
mm39_v1_chr11_-_105347500_105347574	12.6656	Rfx3_Rfx1_Rfx4	ENSMUST00000049995.10|Marchf10|ENSMUSG00000078627.10|membrane associated ring-CH-type finger 10	ENSMUST00000100332.4|Marchf10|ENSMUSG00000078627.10|membrane associated ring-CH-type finger 10
mm39_v1_chr8_+_95393404_95393492	12.6618	Rfx3_Rfx1_Rfx4	ENSMUST00000211858.2|Arl2bp|ENSMUSG00000031776.18|ADP-ribosylation factor-like 2 binding protein
mm39_v1_chr11_+_68961599_68961706	12.5339	Rfx3_Rfx1_Rfx4	ENSMUST00000075980.12|Tmem107|ENSMUSG00000020895.15|transmembrane protein 107	ENSMUST00000094081.5|Tmem107|ENSMUSG00000020895.15|transmembrane protein 107
mm39_v1_chr7_-_12788592_12788691	12.5177	Rfx3_Rfx1_Rfx4	ENSMUST00000182515.8|Mzf1|ENSMUSG00000030380.18|myeloid zinc finger 1	ENSMUST00000069289.15|Mzf1|ENSMUSG00000030380.18|myeloid zinc finger 1
mm39_v1_chr10_-_79422946_79422970	12.3662	Rfx3_Rfx1_Rfx4	ENSMUST00000077433.13|Theg|ENSMUSG00000020317.15|testicular haploid expressed gene
mm39_v1_chr3_+_67281424_67281435	12.3549	Rfx3_Rfx1_Rfx4	ENSMUST00000077916.12|Mlf1|ENSMUSG00000048416.16|myeloid leukemia factor 1
mm39_v1_chr14_-_20502285_20502310	12.204	Rfx3_Rfx1_Rfx4	ENSMUST00000056073.14|Cfap70|ENSMUSG00000039543.17|cilia and flagella associated protein 70	ENSMUST00000022349.14|Cfap70|ENSMUSG00000039543.17|cilia and flagella associated protein 70	ENSMUST00000022348.15|Cfap70|ENSMUSG00000039543.17|cilia and flagella associated protein 70
mm39_v1_chr19_+_6111204_6111287	12.1256	Rfx3_Rfx1_Rfx4	ENSMUST00000162726.5|Znhit2|ENSMUSG00000075227.7|zinc finger, HIT domain containing 2
mm39_v1_chr16_+_31918707_31918791	12.1142	Rfx3_Rfx1_Rfx4	ENSMUST00000042869.7|Cep19|ENSMUSG00000035790.16|centrosomal protein 19
mm39_v1_chr3_+_154799063_154799078	12.0864	Rfx3_Rfx1_Rfx4	ENSMUST00000029833.13|Lrriq3|ENSMUSG00000028182.15|leucine-rich repeats and IQ motif containing 3
mm39_v1_chr7_-_109038202_109038224	12.0621	Rfx3_Rfx1_Rfx4	ENSMUST00000121378.2|Stk33|ENSMUSG00000031027.16|serine/threonine kinase 33
mm39_v1_chr10_+_80134917_80134960	12.0418	Rfx3_Rfx1_Rfx4	ENSMUST00000154212.8|Apc2|ENSMUSG00000020135.14|APC regulator of WNT signaling pathway 2
mm39_v1_chr5_+_149363168_149363186	12.0027	Rfx3_Rfx1_Rfx4	ENSMUST00000201683.4|Tex26|ENSMUSG00000029660.11|testis expressed 26	ENSMUST00000202920.4|Tex26|ENSMUSG00000029660.11|testis expressed 26
mm39_v1_chr2_-_19558719_19558733	12.0016	Rfx3_Rfx1_Rfx4	ENSMUST00000062060.5|4921504E06Rik|ENSMUSG00000026734.10|RIKEN cDNA 4921504E06 gene
mm39_v1_chr9_-_21913833_21913894	11.9887	Rfx3_Rfx1_Rfx4	ENSMUST00000115336.10|Odad3|ENSMUSG00000039632.14|outer dynein arm docking complex subunit 3
mm39_v1_chr1_+_190769010_190769021	11.8936	Rfx3_Rfx1_Rfx4	ENSMUST00000077889.8|Spata45|ENSMUSG00000057072.12|spermatogenesis associated 45
mm39_v1_chr7_-_109037992_109038045	11.8759	Rfx3_Rfx1_Rfx4	ENSMUST00000121748.8|Stk33|ENSMUSG00000031027.16|serine/threonine kinase 33
mm39_v1_chr16_+_17464328_17464372	11.8755	Rfx3_Rfx1_Rfx4	ENSMUST00000056962.11|Ccdc74a|ENSMUSG00000041617.11|coiled-coil domain containing 74A
mm39_v1_chrX_+_35459557_35459588	11.8727	Rfx3_Rfx1_Rfx4	ENSMUST00000115258.9|Zcchc12|ENSMUSG00000036699.13|zinc finger, CCHC domain containing 12
mm39_v1_chrX_+_35459589_35459600	11.8138	Rfx3_Rfx1_Rfx4	ENSMUST00000048067.10|Zcchc12|ENSMUSG00000036699.13|zinc finger, CCHC domain containing 12
mm39_v1_chr9_-_7176957_7176998	11.7929	Rfx3_Rfx1_Rfx4	ENSMUST00000147193.8|Dync2h1|ENSMUSG00000047193.17|dynein cytoplasmic 2 heavy chain 1	ENSMUST00000139115.2|Dync2h1|ENSMUSG00000047193.17|dynein cytoplasmic 2 heavy chain 1
mm39_v1_chr4_+_57434247_57434369	11.791	Rfx3_Rfx1_Rfx4	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chr16_+_31918599_31918676	11.771	Rfx3_Rfx1_Rfx4	ENSMUST00000115168.9|Cep19|ENSMUSG00000035790.16|centrosomal protein 19
mm39_v1_chr17_+_36290743_36290816	11.6887	Rfx3_Rfx1_Rfx4	ENSMUST00000087200.4|Gnl1|ENSMUSG00000024429.10|guanine nucleotide binding protein-like 1
mm39_v1_chr5_+_77163869_77163903	11.6682	Rfx3_Rfx1_Rfx4	ENSMUST00000031161.11|Thegl|ENSMUSG00000029248.15|theg spermatid protein like	ENSMUST00000117880.8|Thegl|ENSMUSG00000029248.15|theg spermatid protein like
mm39_v1_chr6_-_122317156_122317214	11.5503	Rfx3_Rfx1_Rfx4	ENSMUST00000159384.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr8_+_120301974_120302079	11.4946	Rfx3_Rfx1_Rfx4	ENSMUST00000093100.3|Dnaaf1|ENSMUSG00000031831.7|dynein, axonemal assembly factor 1
mm39_v1_chrX_+_35459601_35459614	11.4885	Rfx3_Rfx1_Rfx4	ENSMUST00000115257.8|Zcchc12|ENSMUSG00000036699.13|zinc finger, CCHC domain containing 12
mm39_v1_chr14_-_78774201_78774292	11.4838	Rfx3_Rfx1_Rfx4	ENSMUST00000123853.9|Akap11|ENSMUSG00000022016.18|A kinase (PRKA) anchor protein 11
mm39_v1_chr4_-_154127119_154127171	11.4744	Rfx3_Rfx1_Rfx4	ENSMUST00000047207.7|Ccdc27|ENSMUSG00000039492.8|coiled-coil domain containing 27
mm39_v1_chr9_-_46227219_46227246	11.4471	Rfx3_Rfx1_Rfx4	ENSMUST00000160795.2|4931429L15Rik|ENSMUSG00000056617.13|RIKEN cDNA 4931429L15 gene
mm39_v1_chr9_+_72866067_72866147	11.445	Rfx3_Rfx1_Rfx4	ENSMUST00000098567.9|Dnaaf4|ENSMUSG00000092192.8|dynein axonemal assembly factor 4	ENSMUST00000034734.9|Dnaaf4|ENSMUSG00000092192.8|dynein axonemal assembly factor 4
mm39_v1_chr1_-_87438027_87438095	11.3775	Rfx3_Rfx1_Rfx4	ENSMUST00000027477.15|Ngef|ENSMUSG00000026259.15|neuronal guanine nucleotide exchange factor
mm39_v1_chr15_+_84926909_84926943	11.3648	Rfx3_Rfx1_Rfx4	ENSMUST00000229203.2|Fam118a|ENSMUSG00000022434.9|family with sequence similarity 118, member A
mm39_v1_chr15_-_10558730_10558783	11.3413	Rfx3_Rfx1_Rfx4	ENSMUST00000167842.9|Ttc23l|ENSMUSG00000022249.15|tetratricopeptide repeat domain 23-like	ENSMUST00000022857.14|Ttc23l|ENSMUSG00000022249.15|tetratricopeptide repeat domain 23-like
mm39_v1_chr18_-_35795233_35795255	11.3157	Rfx3_Rfx1_Rfx4	ENSMUST00000025209.12|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24	ENSMUST00000096573.4|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24
mm39_v1_chr4_+_138452593_138452636	11.3033	Rfx3_Rfx1_Rfx4	ENSMUST00000124660.7|Pla2g2c|ENSMUSG00000028750.13|phospholipase A2, group IIC	ENSMUST00000030530.6|Pla2g2c|ENSMUSG00000028750.13|phospholipase A2, group IIC
mm39_v1_chr9_+_110306020_110306048	11.2598	Rfx3_Rfx1_Rfx4	ENSMUST00000198858.5|Kif9|ENSMUSG00000032489.18|kinesin family member 9
mm39_v1_chr8_+_95393228_95393304	11.2402	Rfx3_Rfx1_Rfx4	ENSMUST00000034228.16|Arl2bp|ENSMUSG00000031776.18|ADP-ribosylation factor-like 2 binding protein
mm39_v1_chr3_+_65016750_65016838	11.2307	Rfx3_Rfx1_Rfx4	ENSMUST00000049230.11|Kcnab1|ENSMUSG00000027827.18|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm39_v1_chr16_+_17464428_17464524	11.1682	Rfx3_Rfx1_Rfx4	ENSMUST00000182117.8|Ccdc74a|ENSMUSG00000041617.11|coiled-coil domain containing 74A	ENSMUST00000182671.8|Ccdc74a|ENSMUSG00000041617.11|coiled-coil domain containing 74A	ENSMUST00000182344.8|Ccdc74a|ENSMUSG00000041617.11|coiled-coil domain containing 74A
mm39_v1_chr18_-_23174698_23174729	11.114	Rfx3_Rfx1_Rfx4	ENSMUST00000097651.10|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chr9_-_7177000_7177063	11.0245	Rfx3_Rfx1_Rfx4	ENSMUST00000048417.13|Dync2h1|ENSMUSG00000047193.17|dynein cytoplasmic 2 heavy chain 1
mm39_v1_chr5_-_134935579_134935594	10.9693	Rfx3_Rfx1_Rfx4	ENSMUST00000201316.4|Tmem270|ENSMUSG00000040576.9|transmembrane protein 270	ENSMUST00000047305.6|Tmem270|ENSMUSG00000040576.9|transmembrane protein 270
mm39_v1_chr7_+_18725170_18725244	10.9674	Rfx3_Rfx1_Rfx4	ENSMUST00000059331.9|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin	ENSMUST00000131087.2|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin
mm39_v1_chr15_+_79543397_79543468	10.9341	Rfx3_Rfx1_Rfx4	ENSMUST00000023064.9|Cby1|ENSMUSG00000022428.9|chibby family member 1, beta catenin antagonist
mm39_v1_chr15_+_102353802_102353883	10.8882	Rfx3_Rfx1_Rfx4	ENSMUST00000023809.11|Amhr2|ENSMUSG00000023047.12|anti-Mullerian hormone type 2 receptor	ENSMUST00000229278.2|Amhr2|ENSMUSG00000023047.12|anti-Mullerian hormone type 2 receptor	ENSMUST00000229566.2|Amhr2|ENSMUSG00000023047.12|anti-Mullerian hormone type 2 receptor
mm39_v1_chr9_-_50639367_50639430	10.8779	Rfx3_Rfx1_Rfx4	ENSMUST00000117646.8|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr6_+_103488291_103488335	10.8134	Rfx3_Rfx1_Rfx4	ENSMUST00000204321.2|Chl1|ENSMUSG00000030077.12|cell adhesion molecule L1-like
mm39_v1_chr4_-_119272640_119272658	10.7532	Rfx3_Rfx1_Rfx4	ENSMUST00000238293.2|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30
mm39_v1_chr9_+_43983493_43983509	10.71	Rfx3_Rfx1_Rfx4	ENSMUST00000176671.2|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chrX_+_52362295_52362310	10.7087	Rfx3_Rfx1_Rfx4	ENSMUST00000114835.8|Fam122c|ENSMUSG00000036013.13|family with sequence similarity 122, member C	ENSMUST00000186314.2|Fam122c|ENSMUSG00000036013.13|family with sequence similarity 122, member C
mm39_v1_chr18_-_35795175_35795228	10.6984	Rfx3_Rfx1_Rfx4	ENSMUST00000236574.2|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24	ENSMUST00000236971.2|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24
mm39_v1_chr14_-_49482846_49482931	10.6761	Rfx3_Rfx1_Rfx4	ENSMUST00000227113.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000130853.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000228936.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000022398.15|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198
mm39_v1_chr2_+_124978518_124978553	10.6752	Rfx3_Rfx1_Rfx4	ENSMUST00000238754.2|Ctxn2|ENSMUSG00000074872.4|cortexin 2
mm39_v1_chr4_-_155753628_155753690	10.6633	Rfx3_Rfx1_Rfx4	ENSMUST00000103176.10|Mib2|ENSMUSG00000029060.18|mindbomb E3 ubiquitin protein ligase 2
mm39_v1_chr15_-_79543090_79543157	10.6596	Rfx3_Rfx1_Rfx4	ENSMUST00000109648.9|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A
mm39_v1_chr9_+_108385247_108385292	10.6554	Rfx3_Rfx1_Rfx4	ENSMUST00000207810.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000207862.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000208581.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000134939.9|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000207713.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase
mm39_v1_chr7_+_139414057_139414090	10.6458	Rfx3_Rfx1_Rfx4	ENSMUST00000026548.14|Adgra1|ENSMUSG00000025475.18|adhesion G protein-coupled receptor A1
mm39_v1_chr12_+_110855664_110855746	10.6063	Rfx3_Rfx1_Rfx4	ENSMUST00000165978.3|Tecpr2|ENSMUSG00000021275.17|tectonin beta-propeller repeat containing 2	ENSMUST00000169597.9|Tecpr2|ENSMUSG00000021275.17|tectonin beta-propeller repeat containing 2
mm39_v1_chr10_+_119828821_119828865	10.5415	Rfx3_Rfx1_Rfx4	ENSMUST00000105261.9|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1
mm39_v1_chr11_-_48707763_48707788	10.5053	Rfx3_Rfx1_Rfx4	ENSMUST00000140800.2|Trim41|ENSMUSG00000040365.15|tripartite motif-containing 41
mm39_v1_chr6_-_138635447_138635542	10.5021	Rfx3_Rfx1_Rfx4	ENSMUST00000054786.6|Igbp1b|ENSMUSG00000046717.6|immunoglobulin (CD79A) binding protein 1b
mm39_v1_chr4_-_129556234_129556282	10.4325	Rfx3_Rfx1_Rfx4	ENSMUST00000003828.11|Kpna6|ENSMUSG00000003731.14|karyopherin (importin) alpha 6
mm39_v1_chr7_+_18910340_18910365	10.4267	Rfx3_Rfx1_Rfx4	ENSMUST00000117338.8|Eml2|ENSMUSG00000040811.16|echinoderm microtubule associated protein like 2
mm39_v1_chrX_+_35459621_35459646	10.3738	Rfx3_Rfx1_Rfx4	ENSMUST00000115256.2|Zcchc12|ENSMUSG00000036699.13|zinc finger, CCHC domain containing 12
mm39_v1_chr7_-_4755971_4756093	10.3632	Rfx3_Rfx1_Rfx4	ENSMUST00000183971.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182173.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182738.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182111.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000184143.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182048.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000063324.14|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2
mm39_v1_chr8_+_110993592_110993615	10.3558	Rfx3_Rfx1_Rfx4	ENSMUST00000043141.7|Hydin|ENSMUSG00000059854.9|HYDIN, axonemal central pair apparatus protein
mm39_v1_chr9_-_45923908_45923993	10.352	Rfx3_Rfx1_Rfx4	ENSMUST00000217514.2|Pafah1b2|ENSMUSG00000003131.8|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm39_v1_chr6_+_34757771_34757854	10.3225	Rfx3_Rfx1_Rfx4	ENSMUST00000115012.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3	ENSMUST00000115014.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3	ENSMUST00000115009.2|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3
mm39_v1_chr10_-_89568106_89568187	10.2963	Rfx3_Rfx1_Rfx4	ENSMUST00000020109.5|Actr6|ENSMUSG00000019948.5|ARP6 actin-related protein 6
mm39_v1_chr3_+_29136882_29136920	10.2819	Rfx3_Rfx1_Rfx4	ENSMUST00000119598.8|Egfem1|ENSMUSG00000063600.15|EGF-like and EMI domain containing 1	ENSMUST00000118531.8|Egfem1|ENSMUSG00000063600.15|EGF-like and EMI domain containing 1
mm39_v1_chr9_-_63509747_63509776	10.2392	Rfx3_Rfx1_Rfx4	ENSMUST00000080527.12|Iqch|ENSMUSG00000037801.14|IQ motif containing H	ENSMUST00000042322.11|Iqch|ENSMUSG00000037801.14|IQ motif containing H
mm39_v1_chr18_-_12438695_12438854	10.2263	Rfx3_Rfx1_Rfx4	ENSMUST00000122408.8|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000234183.2|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000142066.2|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000118525.9|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29
mm39_v1_chr4_-_102971752_102971780	10.14	Rfx3_Rfx1_Rfx4	ENSMUST00000106868.4|Dnai4|ENSMUSG00000035126.20|dynein axonemal intermediate chain 4
mm39_v1_chr15_-_83949528_83949572	10.1361	Rfx3_Rfx1_Rfx4	ENSMUST00000156187.8|Efcab6|ENSMUSG00000022441.18|EF-hand calcium binding domain 6
mm39_v1_chr8_-_26087552_26087615	10.1271	Rfx3_Rfx1_Rfx4	ENSMUST00000210234.2|Letm2|ENSMUSG00000037363.10|leucine zipper-EF-hand containing transmembrane protein 2	ENSMUST00000211422.2|Letm2|ENSMUSG00000037363.10|leucine zipper-EF-hand containing transmembrane protein 2
mm39_v1_chr4_+_53631460_53631574	10.1095	Rfx3_Rfx1_Rfx4	ENSMUST00000132151.8|Fsd1l|ENSMUSG00000054752.17|fibronectin type III and SPRY domain containing 1-like	ENSMUST00000159415.9|Fsd1l|ENSMUSG00000054752.17|fibronectin type III and SPRY domain containing 1-like	ENSMUST00000163067.9|Fsd1l|ENSMUSG00000054752.17|fibronectin type III and SPRY domain containing 1-like
mm39_v1_chr2_-_91274967_91275071	10.0735	Rfx3_Rfx1_Rfx4	ENSMUST00000064652.14|1110051M20Rik|ENSMUSG00000040591.19|RIKEN cDNA 1110051M20 gene	ENSMUST00000102594.11|1110051M20Rik|ENSMUSG00000040591.19|RIKEN cDNA 1110051M20 gene	ENSMUST00000094835.9|1110051M20Rik|ENSMUSG00000040591.19|RIKEN cDNA 1110051M20 gene
mm39_v1_chr4_+_58943574_58943638	10.0286	Rfx3_Rfx1_Rfx4	ENSMUST00000107554.2|Zkscan16|ENSMUSG00000038630.9|zinc finger with KRAB and SCAN domains 16
mm39_v1_chr17_-_80884839_80884913	9.94665	Rfx3_Rfx1_Rfx4	ENSMUST00000234349.2|Cdkl4|ENSMUSG00000033966.9|cyclin-dependent kinase-like 4
mm39_v1_chr14_+_30723371_30723425	9.91637	Rfx3_Rfx1_Rfx4	ENSMUST00000022476.9|Glt8d1|ENSMUSG00000021916.17|glycosyltransferase 8 domain containing 1
mm39_v1_chr13_-_92620507_92620547	9.89514	Rfx3_Rfx1_Rfx4	ENSMUST00000040106.9|Fam151b|ENSMUSG00000034334.9|family with sequence similarity 151, member B
mm39_v1_chr11_+_101315893_101315940	9.79619	Rfx3_Rfx1_Rfx4	ENSMUST00000040561.6|Rundc1|ENSMUSG00000035007.6|RUN domain containing 1
mm39_v1_chr17_+_12338161_12338235	9.78633	Rfx3_Rfx1_Rfx4	ENSMUST00000024594.9|Agpat4|ENSMUSG00000023827.9|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm39_v1_chr4_+_10874537_10874607	9.75363	Rfx3_Rfx1_Rfx4	ENSMUST00000101504.3|2610301B20Rik|ENSMUSG00000059482.16|RIKEN cDNA 2610301B20 gene
mm39_v1_chr4_+_10874498_10874526	9.74745	Rfx3_Rfx1_Rfx4	ENSMUST00000080517.14|2610301B20Rik|ENSMUSG00000059482.16|RIKEN cDNA 2610301B20 gene
mm39_v1_chr7_-_12514534_12514606	9.72848	Rfx3_Rfx1_Rfx4	ENSMUST00000211392.2|Zscan18|ENSMUSG00000070822.6|zinc finger and SCAN domain containing 18
mm39_v1_chr19_-_6919755_6919818	9.67265	Rfx3_Rfx1_Rfx4	ENSMUST00000099782.10|Gpr137|ENSMUSG00000024958.14|G protein-coupled receptor 137
mm39_v1_chr7_-_127187767_127187767	9.60003	Rfx3_Rfx1_Rfx4	ENSMUST00000072155.5|Ccdc189|ENSMUSG00000057176.5|coiled-coil domain containing 189
mm39_v1_chr4_+_99717671_99717737	9.59737	Rfx3_Rfx1_Rfx4	ENSMUST00000239518.1|Efcab7|ENSMUSG00000073791.14|EF-hand calcium binding domain 7	ENSMUST00000239520.1|Efcab7|ENSMUSG00000073791.14|EF-hand calcium binding domain 7	ENSMUST00000136874.4|Efcab7|ENSMUSG00000073791.14|EF-hand calcium binding domain 7
mm39_v1_chr5_-_92822984_92823006	9.5879	Rfx3_Rfx1_Rfx4	ENSMUST00000060930.10|Ccdc158|ENSMUSG00000050050.18|coiled-coil domain containing 158
mm39_v1_chr14_-_55873026_55873150	9.55105	Rfx3_Rfx1_Rfx4	ENSMUST00000125133.2|Ipo4|ENSMUSG00000002319.17|importin 4	ENSMUST00000047131.16|Ipo4|ENSMUSG00000002319.17|importin 4
mm39_v1_chr4_+_133829891_133829896	9.52188	Rfx3_Rfx1_Rfx4	ENSMUST00000074690.11|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11
mm39_v1_chr10_+_20828446_20828476	9.5134	Rfx3_Rfx1_Rfx4	ENSMUST00000105525.12|Ahi1|ENSMUSG00000019986.18|Abelson helper integration site 1
mm39_v1_chr9_+_118931532_118931613	9.49624	Rfx3_Rfx1_Rfx4	ENSMUST00000165231.8|Dlec1|ENSMUSG00000038060.16|deleted in lung and esophageal cancer 1	ENSMUST00000140326.8|Dlec1|ENSMUSG00000038060.16|deleted in lung and esophageal cancer 1
mm39_v1_chr12_+_82216193_82216220	9.46949	Rfx3_Rfx1_Rfx4	ENSMUST00000166429.9|Sipa1l1|ENSMUSG00000042700.17|signal-induced proliferation-associated 1 like 1	ENSMUST00000220963.2|Sipa1l1|ENSMUSG00000042700.17|signal-induced proliferation-associated 1 like 1
mm39_v1_chr2_+_29779227_29779255	9.46323	Rfx3_Rfx1_Rfx4	ENSMUST00000123335.8|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chr11_+_69920849_69920924	9.46247	Rfx3_Rfx1_Rfx4	ENSMUST00000143920.4|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr1_+_31261889_31261919	9.43833	Rfx3_Rfx1_Rfx4	ENSMUST00000027230.3|Dnaaf6|ENSMUSG00000026063.5|dynein axonemal assembly factor 6
mm39_v1_chr5_+_115003526_115003541	9.40861	Rfx3_Rfx1_Rfx4	ENSMUST00000134389.3|4930519G04Rik|ENSMUSG00000029564.13|RIKEN cDNA 4930519G04 gene
mm39_v1_chr15_+_75576113_75576140	9.30864	Rfx3_Rfx1_Rfx4	ENSMUST00000121137.9|Rhpn1|ENSMUSG00000022580.14|rhophilin, Rho GTPase binding protein 1
mm39_v1_chr11_+_22462088_22462088	9.24564	Rfx3_Rfx1_Rfx4	ENSMUST00000059319.8|Tmem17|ENSMUSG00000049904.8|transmembrane protein 17
mm39_v1_chr6_-_102441628_102441628	9.23396	Rfx3_Rfx1_Rfx4	ENSMUST00000032159.7|Cntn3|ENSMUSG00000030075.11|contactin 3
mm39_v1_chr2_-_125993887_125993929	9.22211	Rfx3_Rfx1_Rfx4	ENSMUST00000110448.3|Fam227b|ENSMUSG00000027209.18|family with sequence similarity 227, member B	ENSMUST00000110446.9|Fam227b|ENSMUSG00000027209.18|family with sequence similarity 227, member B
mm39_v1_chr1_-_172085977_172086005	9.21682	Rfx3_Rfx1_Rfx4	ENSMUST00000111243.2|Atp1a4|ENSMUSG00000007107.7|ATPase, Na+/K+ transporting, alpha 4 polypeptide
mm39_v1_chr10_-_79973210_79973276	9.1976	Rfx3_Rfx1_Rfx4	ENSMUST00000170219.9|Cbarp|ENSMUSG00000035640.19|calcium channel, voltage-dependent, beta subunit associated regulatory protein	ENSMUST00000169546.9|Cbarp|ENSMUSG00000035640.19|calcium channel, voltage-dependent, beta subunit associated regulatory protein
mm39_v1_chr3_-_30701942_30702025	9.16398	Rfx3_Rfx1_Rfx4	ENSMUST00000029252.8|Lrrc34|ENSMUSG00000027702.8|leucine rich repeat containing 34
mm39_v1_chr17_-_36290129_36290418	9.14657	Rfx3_Rfx1_Rfx4	ENSMUST00000165613.9|Prr3|ENSMUSG00000038500.16|proline-rich polypeptide 3	ENSMUST00000173872.8|Prr3|ENSMUSG00000038500.16|proline-rich polypeptide 3
mm39_v1_chr17_+_28396370_28396432	9.12538	Rfx3_Rfx1_Rfx4	ENSMUST00000002318.8|Zfp523|ENSMUSG00000024220.15|zinc finger protein 523	ENSMUST00000233904.2|Zfp523|ENSMUSG00000024220.15|zinc finger protein 523
mm39_v1_chr15_-_78280099_78280118	9.12141	Rfx3_Rfx1_Rfx4	ENSMUST00000229878.2|Tex33|ENSMUSG00000062154.15|testis expressed 33	ENSMUST00000165170.8|Tex33|ENSMUSG00000062154.15|testis expressed 33	ENSMUST00000074380.14|Tex33|ENSMUSG00000062154.15|testis expressed 33
mm39_v1_chr17_+_85397980_85398073	9.10603	Rfx3_Rfx1_Rfx4	ENSMUST00000095188.7|Camkmt|ENSMUSG00000071037.7|calmodulin-lysine N-methyltransferase
mm39_v1_chr8_-_95869114_95869202	9.04587	Rfx3_Rfx1_Rfx4	ENSMUST00000212554.2|Kifc3|ENSMUSG00000031788.15|kinesin family member C3	ENSMUST00000169748.9|Kifc3|ENSMUSG00000031788.15|kinesin family member C3	ENSMUST00000034240.15|Kifc3|ENSMUSG00000031788.15|kinesin family member C3
mm39_v1_chr2_+_124978612_124978689	9.03121	Rfx3_Rfx1_Rfx4	ENSMUST00000099452.3|Ctxn2|ENSMUSG00000074872.4|cortexin 2	ENSMUST00000238377.2|Ctxn2|ENSMUSG00000074872.4|cortexin 2
mm39_v1_chr11_-_105834953_105835053	9.02261	Rfx3_Rfx1_Rfx4	ENSMUST00000184086.8|Cyb561|ENSMUSG00000019590.17|cytochrome b-561
mm39_v1_chr5_-_115439016_115439058	9.00694	Rfx3_Rfx1_Rfx4	ENSMUST00000009157.4|Dynll1|ENSMUSG00000009013.6|dynein light chain LC8-type 1
mm39_v1_chr5_-_124325213_124325266	8.974	Rfx3_Rfx1_Rfx4	ENSMUST00000161938.8|Pitpnm2|ENSMUSG00000029406.16|phosphatidylinositol transfer protein, membrane-associated 2
mm39_v1_chr9_+_8544228_8544260	8.95143	Rfx3_Rfx1_Rfx4	ENSMUST00000214596.2|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6
mm39_v1_chr14_+_54491637_54491704	8.90167	Rfx3_Rfx1_Rfx4	ENSMUST00000180359.8|Abhd4|ENSMUSG00000040997.15|abhydrolase domain containing 4	ENSMUST00000199338.2|Abhd4|ENSMUSG00000040997.15|abhydrolase domain containing 4
mm39_v1_chr16_-_38649107_38649116	8.86677	Rfx3_Rfx1_Rfx4	ENSMUST00000122078.3|Tex55|ENSMUSG00000022798.9|testis expressed 55
mm39_v1_chr15_+_75576149_75576243	8.78179	Rfx3_Rfx1_Rfx4	ENSMUST00000023244.6|Rhpn1|ENSMUSG00000022580.14|rhophilin, Rho GTPase binding protein 1
mm39_v1_chr17_+_28396103_28396214	8.77862	Rfx3_Rfx1_Rfx4	ENSMUST00000073534.10|Zfp523|ENSMUSG00000024220.15|zinc finger protein 523
mm39_v1_chr14_+_30723340_30723364	8.76366	Rfx3_Rfx1_Rfx4	ENSMUST00000168584.9|Glt8d1|ENSMUSG00000021916.17|glycosyltransferase 8 domain containing 1	ENSMUST00000226378.2|Glt8d1|ENSMUSG00000021916.17|glycosyltransferase 8 domain containing 1
mm39_v1_chr10_+_20046748_20046790	8.65879	Rfx3_Rfx1_Rfx4	ENSMUST00000215924.2|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7
mm39_v1_chr5_-_115438971_115439003	8.60699	Rfx3_Rfx1_Rfx4	ENSMUST00000112090.2|Dynll1|ENSMUSG00000009013.6|dynein light chain LC8-type 1
mm39_v1_chr19_+_47167554_47167615	8.60618	Rfx3_Rfx1_Rfx4	ENSMUST00000235290.2|Neurl1a|ENSMUSG00000006435.17|neuralized E3 ubiquitin protein ligase 1A
mm39_v1_chr15_-_78947038_78947142	8.60082	Rfx3_Rfx1_Rfx4	ENSMUST00000151889.8|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54	ENSMUST00000040676.11|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54
mm39_v1_chr13_-_120217380_120217445	8.56358	Rfx3_Rfx1_Rfx4	ENSMUST00000178142.2|Nim1k|ENSMUSG00000095930.2|NIM1 serine/threonine protein kinase
mm39_v1_chr8_+_46080840_46080866	8.50013	Rfx3_Rfx1_Rfx4	ENSMUST00000135336.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr8_+_84703495_84703528	8.45356	Rfx3_Rfx1_Rfx4	ENSMUST00000211558.2|Prkaca|ENSMUSG00000005469.11|protein kinase, cAMP dependent, catalytic, alpha
mm39_v1_chr3_-_36667519_36667558	8.45257	Rfx3_Rfx1_Rfx4	ENSMUST00000040148.11|Bbs7|ENSMUSG00000037325.11|Bardet-Biedl syndrome 7 (human)	ENSMUST00000142333.2|Bbs7|ENSMUSG00000037325.11|Bardet-Biedl syndrome 7 (human)
mm39_v1_chr10_+_119828867_119828975	8.45248	Rfx3_Rfx1_Rfx4	ENSMUST00000154238.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1
mm39_v1_chr15_+_78312764_78312836	8.41392	Rfx3_Rfx1_Rfx4	ENSMUST00000162517.8|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17	ENSMUST00000166142.10|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17	ENSMUST00000089414.11|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17
mm39_v1_chr7_-_121580930_121580942	8.4115	Rfx3_Rfx1_Rfx4	ENSMUST00000205438.2|Cog7|ENSMUSG00000034951.11|component of oligomeric golgi complex 7	ENSMUST00000057576.8|Cog7|ENSMUSG00000034951.11|component of oligomeric golgi complex 7
mm39_v1_chr2_+_70339832_70339846	8.40482	Rfx3_Rfx1_Rfx4	ENSMUST00000153121.2|Erich2|ENSMUSG00000075302.11|glutamate rich 2
mm39_v1_chr15_+_78312851_78312871	8.40421	Rfx3_Rfx1_Rfx4	ENSMUST00000159771.8|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17
mm39_v1_chr15_-_98661076_98661101	8.37317	Rfx3_Rfx1_Rfx4	ENSMUST00000053183.12|Arf3|ENSMUSG00000051853.11|ADP-ribosylation factor 3
mm39_v1_chr9_+_8544143_8544224	8.3553	Rfx3_Rfx1_Rfx4	ENSMUST00000050433.8|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6	ENSMUST00000217462.2|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6
mm39_v1_chr1_-_162913210_162913242	8.35217	Rfx3_Rfx1_Rfx4	ENSMUST00000096608.5|Mroh9|ENSMUSG00000071890.5|maestro heat-like repeat family member 9
mm39_v1_chr11_-_116357047_116357067	8.34783	Rfx3_Rfx1_Rfx4	ENSMUST00000208602.2|Qrich2|ENSMUSG00000070331.15|glutamine rich 2
mm39_v1_chr1_-_58735106_58735148	8.34513	Rfx3_Rfx1_Rfx4	ENSMUST00000055313.14|Flacc1|ENSMUSG00000047528.14|flagellum associated containing coiled-coil domains 1	ENSMUST00000188772.7|Flacc1|ENSMUSG00000047528.14|flagellum associated containing coiled-coil domains 1
mm39_v1_chr15_-_71599664_71599697	8.30067	Rfx3_Rfx1_Rfx4	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr18_+_23937019_23937111	8.27465	Rfx3_Rfx1_Rfx4	ENSMUST00000025127.5|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr8_+_66964401_66964417	8.25007	Rfx3_Rfx1_Rfx4	ENSMUST00000002025.5|Tktl2|ENSMUSG00000025519.6|transketolase-like 2	ENSMUST00000183187.2|Tktl2|ENSMUSG00000025519.6|transketolase-like 2
mm39_v1_chr12_-_87037204_87037241	8.20985	Rfx3_Rfx1_Rfx4	ENSMUST00000222543.2|Zdhhc22|ENSMUSG00000048483.7|zinc finger, DHHC-type containing 22
mm39_v1_chr4_-_149858694_149858744	8.18709	Rfx3_Rfx1_Rfx4	ENSMUST00000105686.3|Slc25a33|ENSMUSG00000028982.10|solute carrier family 25, member 33
mm39_v1_chr4_-_126647156_126647239	8.14507	Rfx3_Rfx1_Rfx4	ENSMUST00000030637.14|Ncdn|ENSMUSG00000028833.14|neurochondrin	ENSMUST00000106116.2|Ncdn|ENSMUSG00000028833.14|neurochondrin
mm39_v1_chr6_+_119152210_119152256	8.12895	Rfx3_Rfx1_Rfx4	ENSMUST00000112777.9|Dcp1b|ENSMUSG00000041477.15|decapping mRNA 1B	ENSMUST00000073909.6|Dcp1b|ENSMUSG00000041477.15|decapping mRNA 1B
mm39_v1_chr2_+_29780122_29780168	8.09369	Rfx3_Rfx1_Rfx4	ENSMUST00000113762.8|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2	ENSMUST00000113765.8|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chr13_-_59890564_59890564	8.09185	Rfx3_Rfx1_Rfx4	ENSMUST00000055343.3|1700014D04Rik|ENSMUSG00000051054.5|RIKEN cDNA 1700014D04 gene
mm39_v1_chr7_-_133966588_133966613	8.08427	Rfx3_Rfx1_Rfx4	ENSMUST00000172947.8|D7Ertd443e|ENSMUSG00000030994.17|DNA segment, Chr 7, ERATO Doi 443, expressed
mm39_v1_chr16_-_32876544_32876582	8.07478	Rfx3_Rfx1_Rfx4	ENSMUST00000115100.9|Iqcg|ENSMUSG00000035578.17|IQ motif containing G
mm39_v1_chr10_-_110292053_110292106	8.0736	Rfx3_Rfx1_Rfx4	ENSMUST00000239301.2|Nav3|ENSMUSG00000020181.19|neuron navigator 3
mm39_v1_chr2_+_118493713_118493809	8.07212	Rfx3_Rfx1_Rfx4	ENSMUST00000099557.10|Pak6|ENSMUSG00000074923.11|p21 (RAC1) activated kinase 6
mm39_v1_chr7_+_79392888_79392938	7.99018	Rfx3_Rfx1_Rfx4	ENSMUST00000035622.8|Wdr93|ENSMUSG00000039099.8|WD repeat domain 93
mm39_v1_chr2_-_121101794_121101805	7.9647	Rfx3_Rfx1_Rfx4	ENSMUST00000131245.2|Trp53bp1|ENSMUSG00000043909.17|transformation related protein 53 binding protein 1
mm39_v1_chr4_+_152562599_152562644	7.94317	Rfx3_Rfx1_Rfx4	ENSMUST00000081393.10|Nphp4|ENSMUSG00000039577.18|nephronophthisis 4 (juvenile) homolog (human)
mm39_v1_chr3_-_36667610_36667626	7.91807	Rfx3_Rfx1_Rfx4	ENSMUST00000108156.9|Bbs7|ENSMUSG00000037325.11|Bardet-Biedl syndrome 7 (human)
mm39_v1_chr1_+_179495767_179495833	7.90785	Rfx3_Rfx1_Rfx4	ENSMUST00000040538.10|Sccpdh|ENSMUSG00000038936.14|saccharopine dehydrogenase (putative)
mm39_v1_chr3_-_36667434_36667517	7.89029	Rfx3_Rfx1_Rfx4	ENSMUST00000108155.8|Bbs7|ENSMUSG00000037325.11|Bardet-Biedl syndrome 7 (human)
mm39_v1_chr10_+_58333740_58333792	7.83748	Rfx3_Rfx1_Rfx4	ENSMUST00000036576.10|Ccdc138|ENSMUSG00000038010.10|coiled-coil domain containing 138
mm39_v1_chr7_-_4535403_4535469	7.80609	Rfx3_Rfx1_Rfx4	ENSMUST00000094897.5|Dnaaf3|ENSMUSG00000055809.8|dynein, axonemal assembly factor 3
mm39_v1_chr16_+_36041838_36041932	7.79913	Rfx3_Rfx1_Rfx4	ENSMUST00000187183.7|Csta2|ENSMUSG00000095620.8|cystatin A family member 2	ENSMUST00000187742.7|Csta2|ENSMUSG00000095620.8|cystatin A family member 2
mm39_v1_chr15_+_89417017_89417093	7.79252	Rfx3_Rfx1_Rfx4	ENSMUST00000167173.2|Shank3|ENSMUSG00000022623.18|SH3 and multiple ankyrin repeat domains 3
mm39_v1_chr4_+_133829898_133829929	7.78734	Rfx3_Rfx1_Rfx4	ENSMUST00000070246.9|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11	ENSMUST00000156750.2|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11
mm39_v1_chr5_+_149363114_149363129	7.77387	Rfx3_Rfx1_Rfx4	ENSMUST00000031667.8|Tex26|ENSMUSG00000029660.11|testis expressed 26
mm39_v1_chr18_+_63841756_63841801	7.77269	Rfx3_Rfx1_Rfx4	ENSMUST00000072726.7|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7	ENSMUST00000235648.2|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7	ENSMUST00000236879.2|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7
mm39_v1_chr2_+_152269532_152269620	7.74806	Rfx3_Rfx1_Rfx4	ENSMUST00000128737.2|6820408C15Rik|ENSMUSG00000032680.12|RIKEN cDNA 6820408C15 gene
mm39_v1_chr8_+_78939920_78940003	7.74698	Rfx3_Rfx1_Rfx4	ENSMUST00000117845.8|Ttc29|ENSMUSG00000037101.17|tetratricopeptide repeat domain 29	ENSMUST00000126172.8|Ttc29|ENSMUSG00000037101.17|tetratricopeptide repeat domain 29	ENSMUST00000049395.15|Ttc29|ENSMUSG00000037101.17|tetratricopeptide repeat domain 29
mm39_v1_chr10_-_82526442_82526484	7.73966	Rfx3_Rfx1_Rfx4	ENSMUST00000065815.13|Glt8d2|ENSMUSG00000020251.14|glycosyltransferase 8 domain containing 2	ENSMUST00000020485.10|Glt8d2|ENSMUSG00000020251.14|glycosyltransferase 8 domain containing 2
mm39_v1_chr11_+_101875095_101875115	7.70501	Rfx3_Rfx1_Rfx4	ENSMUST00000176722.8|Cfap97d1|ENSMUSG00000010841.14|CFAP97 domain containing 1	ENSMUST00000175972.2|Cfap97d1|ENSMUSG00000010841.14|CFAP97 domain containing 1
mm39_v1_chr12_+_113149487_113149559	7.64024	Rfx3_Rfx1_Rfx4	ENSMUST00000058491.8|Tmem121|ENSMUSG00000049036.8|transmembrane protein 121
mm39_v1_chr9_+_50528813_50528861	7.62841	Rfx3_Rfx1_Rfx4	ENSMUST00000141366.8|Pih1d2|ENSMUSG00000000167.15|PIH1 domain containing 2
mm39_v1_chr9_-_109946447_109946513	7.62186	Rfx3_Rfx1_Rfx4	ENSMUST00000111991.9|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000197182.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000198425.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000199529.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000196171.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm39_v1_chr16_-_91525485_91525589	7.55808	Rfx3_Rfx1_Rfx4	ENSMUST00000231499.2|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1	ENSMUST00000141664.9|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1	ENSMUST00000123751.2|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1	ENSMUST00000122254.8|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1	ENSMUST00000114023.3|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1
mm39_v1_chr7_+_57069417_57069440	7.46539	Rfx3_Rfx1_Rfx4	ENSMUST00000085240.11|Gabrb3|ENSMUSG00000033676.14|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm39_v1_chr9_-_50639230_50639308	7.46269	Rfx3_Rfx1_Rfx4	ENSMUST00000118707.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000034566.15|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr3_+_154799223_154799233	7.39777	Rfx3_Rfx1_Rfx4	ENSMUST00000194376.2|Lrriq3|ENSMUSG00000028182.15|leucine-rich repeats and IQ motif containing 3
mm39_v1_chr10_+_41179966_41179976	7.39597	Rfx3_Rfx1_Rfx4	ENSMUST00000173494.4|Ak9|ENSMUSG00000091415.6|adenylate kinase 9
mm39_v1_chr16_-_3725515_3725582	7.38529	Rfx3_Rfx1_Rfx4	ENSMUST00000177221.2|1700037C18Rik|ENSMUSG00000005983.16|RIKEN cDNA 1700037C18 gene	ENSMUST00000177323.8|1700037C18Rik|ENSMUSG00000005983.16|RIKEN cDNA 1700037C18 gene
mm39_v1_chr1_-_90081118_90081128	7.38221	Rfx3_Rfx1_Rfx4	ENSMUST00000113094.9|Iqca|ENSMUSG00000026301.17|IQ motif containing with AAA domain
mm39_v1_chr2_-_121101822_121101888	7.36852	Rfx3_Rfx1_Rfx4	ENSMUST00000110647.8|Trp53bp1|ENSMUSG00000043909.17|transformation related protein 53 binding protein 1	ENSMUST00000110648.8|Trp53bp1|ENSMUSG00000043909.17|transformation related protein 53 binding protein 1
mm39_v1_chr10_+_74802996_74803035	7.32388	Rfx3_Rfx1_Rfx4	ENSMUST00000037813.5|Gnaz|ENSMUSG00000040009.7|guanine nucleotide binding protein, alpha z subunit
mm39_v1_chr4_+_111577172_111577245	7.28561	Rfx3_Rfx1_Rfx4	ENSMUST00000038868.14|Spata6|ENSMUSG00000034401.17|spermatogenesis associated 6	ENSMUST00000070513.13|Spata6|ENSMUSG00000034401.17|spermatogenesis associated 6	ENSMUST00000153746.8|Spata6|ENSMUSG00000034401.17|spermatogenesis associated 6
mm39_v1_chr19_-_23630143_23630185	7.27491	Rfx3_Rfx1_Rfx4	ENSMUST00000035849.5|1700028P14Rik|ENSMUSG00000033053.5|RIKEN cDNA 1700028P14 gene
mm39_v1_chr2_-_131016573_131016698	7.22773	Rfx3_Rfx1_Rfx4	ENSMUST00000127987.2|Spef1|ENSMUSG00000027329.10|sperm flagellar 1
mm39_v1_chr1_+_191709329_191709349	7.21276	Rfx3_Rfx1_Rfx4	ENSMUST00000180463.3|Rd3|ENSMUSG00000049353.18|retinal degeneration 3	ENSMUST00000181512.8|Rd3|ENSMUSG00000049353.18|retinal degeneration 3
mm39_v1_chr5_+_30486375_30486445	7.19347	Rfx3_Rfx1_Rfx4	ENSMUST00000101448.5|Drc1|ENSMUSG00000073102.8|dynein regulatory complex subunit 1
mm39_v1_chr8_+_66838927_66838980	7.17305	Rfx3_Rfx1_Rfx4	ENSMUST00000039540.12|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1	ENSMUST00000110253.3|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1
mm39_v1_chr11_+_83193495_83193778	7.16907	Rfx3_Rfx1_Rfx4	ENSMUST00000176430.8|Ap2b1|ENSMUSG00000035152.15|adaptor-related protein complex 2, beta 1 subunit	ENSMUST00000065692.14|Ap2b1|ENSMUSG00000035152.15|adaptor-related protein complex 2, beta 1 subunit	ENSMUST00000142680.2|Ap2b1|ENSMUSG00000035152.15|adaptor-related protein complex 2, beta 1 subunit
mm39_v1_chr11_+_69231589_69231665	7.14001	Rfx3_Rfx1_Rfx4	ENSMUST00000218008.2|Rnf227|ENSMUSG00000043419.12|ring finger protein 227	ENSMUST00000151617.3|Rnf227|ENSMUSG00000043419.12|ring finger protein 227
mm39_v1_chrX_-_138963299_138963354	7.11591	Rfx3_Rfx1_Rfx4	ENSMUST00000124075.2|Nup62cl|ENSMUSG00000072944.12|nucleoporin 62 C-terminal like	ENSMUST00000101212.9|Nup62cl|ENSMUSG00000072944.12|nucleoporin 62 C-terminal like	ENSMUST00000125678.9|Nup62cl|ENSMUSG00000072944.12|nucleoporin 62 C-terminal like
mm39_v1_chr2_+_71811526_71811631	7.10067	Rfx3_Rfx1_Rfx4	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr10_+_62816005_62816041	7.04185	Rfx3_Rfx1_Rfx4	ENSMUST00000131718.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000119567.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000122231.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2
mm39_v1_chr11_-_62622691_62622736	7.03376	Rfx3_Rfx1_Rfx4	ENSMUST00000150336.8|Zfp287|ENSMUSG00000005267.14|zinc finger protein 287
mm39_v1_chr2_-_75812311_75812311	7.02099	Rfx3_Rfx1_Rfx4	ENSMUST00000099994.5|Ttc30a1|ENSMUSG00000075271.5|tetratricopeptide repeat domain 30A1
mm39_v1_chr15_+_36179676_36179849	7.00128	Rfx3_Rfx1_Rfx4	ENSMUST00000171205.3|Spag1|ENSMUSG00000037617.13|sperm associated antigen 1
mm39_v1_chr8_+_72022300_72022392	6.95648	Rfx3_Rfx1_Rfx4	ENSMUST00000212111.2|Slc27a1|ENSMUSG00000031808.8|solute carrier family 27 (fatty acid transporter), member 1
mm39_v1_chr5_-_31448370_31448488	6.87354	Rfx3_Rfx1_Rfx4	ENSMUST00000041565.11|Ift172|ENSMUSG00000038564.12|intraflagellar transport 172	ENSMUST00000201809.2|Ift172|ENSMUSG00000038564.12|intraflagellar transport 172
mm39_v1_chr17_-_45785752_45785864	6.87081	Rfx3_Rfx1_Rfx4	ENSMUST00000233553.2|Spats1|ENSMUSG00000023935.11|spermatogenesis associated, serine-rich 1	ENSMUST00000233769.2|Spats1|ENSMUSG00000023935.11|spermatogenesis associated, serine-rich 1	ENSMUST00000024731.9|Spats1|ENSMUSG00000023935.11|spermatogenesis associated, serine-rich 1
mm39_v1_chr15_-_98660873_98661071	6.85813	Rfx3_Rfx1_Rfx4	ENSMUST00000156572.3|Arf3|ENSMUSG00000051853.11|ADP-ribosylation factor 3
mm39_v1_chr2_-_5900130_5900243	6.85087	Rfx3_Rfx1_Rfx4	ENSMUST00000026926.5|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000193792.6|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000102981.10|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)
mm39_v1_chr17_-_53770324_53770368	6.83259	Rfx3_Rfx1_Rfx4	ENSMUST00000024725.5|Efhb|ENSMUSG00000023931.6|EF hand domain family, member B
mm39_v1_chr7_-_133203838_133203894	6.82561	Rfx3_Rfx1_Rfx4	ENSMUST00000033275.4|Tex36|ENSMUSG00000030976.4|testis expressed 36
mm39_v1_chr12_-_72117865_72117899	6.79001	Rfx3_Rfx1_Rfx4	ENSMUST00000050649.6|Gpr135|ENSMUSG00000043398.6|G protein-coupled receptor 135
mm39_v1_chr5_-_136199525_136199567	6.77963	Rfx3_Rfx1_Rfx4	ENSMUST00000041048.6|Orai2|ENSMUSG00000039747.12|ORAI calcium release-activated calcium modulator 2
mm39_v1_chr3_+_154799163_154799185	6.77215	Rfx3_Rfx1_Rfx4	ENSMUST00000192383.6|Lrriq3|ENSMUSG00000028182.15|leucine-rich repeats and IQ motif containing 3
mm39_v1_chr4_-_62126598_62126660	6.75639	Rfx3_Rfx1_Rfx4	ENSMUST00000221329.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000129511.3|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chr6_-_89572629_89572640	6.72333	Rfx3_Rfx1_Rfx4	ENSMUST00000113550.6|Chchd6|ENSMUSG00000030086.17|coiled-coil-helix-coiled-coil-helix domain containing 6	ENSMUST00000032172.14|Chchd6|ENSMUSG00000030086.17|coiled-coil-helix-coiled-coil-helix domain containing 6
mm39_v1_chr5_-_92823111_92823150	6.68882	Rfx3_Rfx1_Rfx4	ENSMUST00000151180.8|Ccdc158|ENSMUSG00000050050.18|coiled-coil domain containing 158	ENSMUST00000150359.2|Ccdc158|ENSMUSG00000050050.18|coiled-coil domain containing 158
mm39_v1_chr4_-_62126662_62126724	6.68168	Rfx3_Rfx1_Rfx4	ENSMUST00000222050.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000068822.4|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chr17_-_56381966_56382034	6.66471	Rfx3_Rfx1_Rfx4	ENSMUST00000019722.12|Ubxn6|ENSMUSG00000019578.12|UBX domain protein 6
mm39_v1_chr10_-_39775182_39775266	6.60296	Rfx3_Rfx1_Rfx4	ENSMUST00000178045.9|Mfsd4b4|ENSMUSG00000096687.9|major facilitator superfamily domain containing 4B4	ENSMUST00000178563.3|Mfsd4b4|ENSMUSG00000096687.9|major facilitator superfamily domain containing 4B4
mm39_v1_chr5_-_122510292_122510453	6.59517	Rfx3_Rfx1_Rfx4	ENSMUST00000031419.6|Fam216a|ENSMUSG00000029463.6|family with sequence similarity 216, member A
mm39_v1_chr9_+_20563386_20563401	6.59278	Rfx3_Rfx1_Rfx4	ENSMUST00000034689.8|Pin1|ENSMUSG00000032171.8|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm39_v1_chr4_-_106474429_106474437	6.54141	Rfx3_Rfx1_Rfx4	ENSMUST00000189032.7|Lexm|ENSMUSG00000054362.10|lymphocyte expansion molecule	ENSMUST00000106788.2|Lexm|ENSMUSG00000054362.10|lymphocyte expansion molecule
mm39_v1_chr10_+_83558729_83558830	6.52176	Rfx3_Rfx1_Rfx4	ENSMUST00000150459.3|1500009L16Rik|ENSMUSG00000087651.4|RIKEN cDNA 1500009L16 gene
mm39_v1_chr3_+_103875261_103875426	6.51261	Rfx3_Rfx1_Rfx4	ENSMUST00000117150.8|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1
mm39_v1_chr8_+_95710977_95710999	6.49435	Rfx3_Rfx1_Rfx4	ENSMUST00000093271.8|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr7_-_44024429_44024459	6.46176	Rfx3_Rfx1_Rfx4	ENSMUST00000107933.8|1700008O03Rik|ENSMUSG00000008028.16|RIKEN cDNA 1700008O03 gene
mm39_v1_chr5_+_136936984_136937029	6.45065	Rfx3_Rfx1_Rfx4	ENSMUST00000200157.5|Ift22|ENSMUSG00000007987.13|intraflagellar transport 22
mm39_v1_chr18_+_74416161_74416203	6.44843	Rfx3_Rfx1_Rfx4	ENSMUST00000114895.4|Cfap53|ENSMUSG00000035394.12|cilia and flagella associated protein 53
mm39_v1_chr14_+_99337311_99337399	6.43164	Rfx3_Rfx1_Rfx4	ENSMUST00000022650.9|Pibf1|ENSMUSG00000022064.11|progesterone immunomodulatory binding factor 1
mm39_v1_chr15_+_76555838_76555909	6.41068	Rfx3_Rfx1_Rfx4	ENSMUST00000135388.3|Ppp1r16a|ENSMUSG00000033819.17|protein phosphatase 1, regulatory subunit 16A
mm39_v1_chr4_+_117407517_117407606	6.31263	Rfx3_Rfx1_Rfx4	ENSMUST00000037127.15|Eri3|ENSMUSG00000033423.17|exoribonuclease 3
mm39_v1_chr16_+_32315090_32315118	6.30405	Rfx3_Rfx1_Rfx4	ENSMUST00000231510.2|Zdhhc19|ENSMUSG00000052363.9|zinc finger, DHHC domain containing 19
mm39_v1_chr6_-_126898768_126898802	6.29611	Rfx3_Rfx1_Rfx4	ENSMUST00000078521.7|Dyrk4|ENSMUSG00000030345.17|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
mm39_v1_chr5_+_76988444_76988484	6.24821	Rfx3_Rfx1_Rfx4	ENSMUST00000120639.9|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000163347.8|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000121851.2|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin
mm39_v1_chr15_+_30172716_30172748	6.2481	Rfx3_Rfx1_Rfx4	ENSMUST00000081728.7|Ctnnd2|ENSMUSG00000022240.11|catenin (cadherin associated protein), delta 2
mm39_v1_chr4_-_119272667_119272685	6.24034	Rfx3_Rfx1_Rfx4	ENSMUST00000238609.2|Ccdc30|ENSMUSG00000028637.17|coiled-coil domain containing 30
mm39_v1_chr18_+_77273510_77273575	6.20737	Rfx3_Rfx1_Rfx4	ENSMUST00000075290.8|St8sia5|ENSMUSG00000025425.19|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	ENSMUST00000079618.11|St8sia5|ENSMUSG00000025425.19|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm39_v1_chr11_+_72105964_72105964	6.19191	Rfx3_Rfx1_Rfx4	ENSMUST00000066087.5|4930563E22Rik|ENSMUSG00000053574.6|RIKEN cDNA 4930563E22 gene
mm39_v1_chr1_+_183170293_183170353	6.18876	Rfx3_Rfx1_Rfx4	ENSMUST00000192076.3|Taf1a|ENSMUSG00000072258.12|TATA-box binding protein associated factor, RNA polymerase I, A
mm39_v1_chr2_+_29678248_29678314	6.15794	Rfx3_Rfx1_Rfx4	ENSMUST00000028137.10|Coq4|ENSMUSG00000026798.11|coenzyme Q4	ENSMUST00000148791.2|Coq4|ENSMUSG00000026798.11|coenzyme Q4
mm39_v1_chr12_+_65012564_65012714	6.10479	Rfx3_Rfx1_Rfx4	ENSMUST00000066296.9|Togaram1|ENSMUSG00000035614.12|TOG array regulator of axonemal microtubules 1	ENSMUST00000223166.2|Togaram1|ENSMUSG00000035614.12|TOG array regulator of axonemal microtubules 1
mm39_v1_chr11_-_101316156_101316205	6.10035	Rfx3_Rfx1_Rfx4	ENSMUST00000103102.10|Ptges3l|ENSMUSG00000097487.8|prostaglandin E synthase 3 like
mm39_v1_chr3_-_87655926_87655937	6.08555	Rfx3_Rfx1_Rfx4	ENSMUST00000023846.11|Lrrc71|ENSMUSG00000023084.12|leucine rich repeat containing 71
mm39_v1_chr17_+_49922129_49922200	6.07666	Rfx3_Rfx1_Rfx4	ENSMUST00000162854.2|Kif6|ENSMUSG00000023999.15|kinesin family member 6
mm39_v1_chr1_-_171188302_171188366	6.06688	Rfx3_Rfx1_Rfx4	ENSMUST00000061878.5|Klhdc9|ENSMUSG00000045259.5|kelch domain containing 9
mm39_v1_chr2_-_28945051_28945095	5.97505	Rfx3_Rfx1_Rfx4	ENSMUST00000189711.7|Cfap77|ENSMUSG00000079502.9|cilia and flagella associated protein 77	ENSMUST00000157048.4|Cfap77|ENSMUSG00000079502.9|cilia and flagella associated protein 77
mm39_v1_chr15_+_78798116_78798127	5.9607	Rfx3_Rfx1_Rfx4	ENSMUST00000089378.5|Pdxp|ENSMUSG00000116165.2|pyridoxal (pyridoxine, vitamin B6) phosphatase
mm39_v1_chr7_+_18810167_18810198	5.93162	Rfx3_Rfx1_Rfx4	ENSMUST00000108479.2|Dmwd|ENSMUSG00000030410.17|dystrophia myotonica-containing WD repeat motif
mm39_v1_chr8_-_34237752_34237809	5.91445	Rfx3_Rfx1_Rfx4	ENSMUST00000179364.3|Smim18|ENSMUSG00000094500.3|small integral membrane protein 18
mm39_v1_chrX_+_45417884_45417893	5.88802	Rfx3_Rfx1_Rfx4	ENSMUST00000059466.3|Actrt1|ENSMUSG00000046615.3|actin-related protein T1
mm39_v1_chr2_+_166634445_166634456	5.87563	Rfx3_Rfx1_Rfx4	ENSMUST00000065753.2|Trp53rkb|ENSMUSG00000042854.10|transformation related protein 53 regulating kinase B
mm39_v1_chr3_+_98289854_98289869	5.87224	Rfx3_Rfx1_Rfx4	ENSMUST00000178372.2|Zfp697|ENSMUSG00000050064.15|zinc finger protein 697
mm39_v1_chr5_+_30971915_30971985	5.87107	Rfx3_Rfx1_Rfx4	ENSMUST00000031058.15|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
mm39_v1_chr1_+_69866145_69866162	5.85831	Rfx3_Rfx1_Rfx4	ENSMUST00000065425.12|Spag16|ENSMUSG00000053153.15|sperm associated antigen 16	ENSMUST00000113940.4|Spag16|ENSMUSG00000053153.15|sperm associated antigen 16
mm39_v1_chr8_-_46428277_46428316	5.84496	Rfx3_Rfx1_Rfx4	ENSMUST00000095323.8|1700029J07Rik|ENSMUSG00000071103.11|RIKEN cDNA 1700029J07 gene	ENSMUST00000098786.3|1700029J07Rik|ENSMUSG00000071103.11|RIKEN cDNA 1700029J07 gene
mm39_v1_chr9_+_108447077_108447142	5.83201	Rfx3_Rfx1_Rfx4	ENSMUST00000019183.14|Dalrd3|ENSMUSG00000019039.15|DALR anticodon binding domain containing 3
mm39_v1_chr8_-_70346625_70346634	5.80766	Rfx3_Rfx1_Rfx4	ENSMUST00000152938.9|Yjefn3|ENSMUSG00000048967.17|YjeF N-terminal domain containing 3
mm39_v1_chr15_+_81548090_81548158	5.79578	Rfx3_Rfx1_Rfx4	ENSMUST00000023029.15|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit	ENSMUST00000174229.8|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit	ENSMUST00000172748.8|L3mbtl2|ENSMUSG00000022394.15|L3MBTL2 polycomb repressive complex 1 subunit
mm39_v1_chrX_-_36432482_36432509	5.75835	Rfx3_Rfx1_Rfx4	ENSMUST00000046557.6|Akap14|ENSMUSG00000036551.7|A kinase (PRKA) anchor protein 14
mm39_v1_chr9_-_109946398_109946414	5.75181	Rfx3_Rfx1_Rfx4	ENSMUST00000200066.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm39_v1_chr2_+_163500290_163500430	5.72876	Rfx3_Rfx1_Rfx4	ENSMUST00000164399.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000064703.13|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000099105.9|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000152418.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000126182.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000131228.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr11_-_120823657_120823703	5.72184	Rfx3_Rfx1_Rfx4	ENSMUST00000056781.5|Ccdc57|ENSMUSG00000048445.7|coiled-coil domain containing 57
mm39_v1_chr9_-_15834052_15834052	5.6857	Rfx3_Rfx1_Rfx4	ENSMUST00000217187.2|Fat3|ENSMUSG00000074505.7|FAT atypical cadherin 3
mm39_v1_chr15_+_76555815_76555837	5.63158	Rfx3_Rfx1_Rfx4	ENSMUST00000037551.15|Ppp1r16a|ENSMUSG00000033819.17|protein phosphatase 1, regulatory subunit 16A
mm39_v1_chr9_-_64248426_64248539	5.62578	Rfx3_Rfx1_Rfx4	ENSMUST00000120760.8|Dis3l|ENSMUSG00000032396.18|DIS3 like exosome 3'-5' exoribonuclease	ENSMUST00000168844.9|Dis3l|ENSMUSG00000032396.18|DIS3 like exosome 3'-5' exoribonuclease
mm39_v1_chr16_+_4653271_4653286	5.60572	Rfx3_Rfx1_Rfx4	ENSMUST00000100211.11|4930562C15Rik|ENSMUSG00000022518.17|RIKEN cDNA 4930562C15 gene
mm39_v1_chr4_-_43429077_43429134	5.60288	Rfx3_Rfx1_Rfx4	ENSMUST00000107929.10|Fam166b|ENSMUSG00000042788.13|family with sequence similarity 166, member B	ENSMUST00000107928.9|Fam166b|ENSMUSG00000042788.13|family with sequence similarity 166, member B	ENSMUST00000171134.9|Fam166b|ENSMUSG00000042788.13|family with sequence similarity 166, member B	ENSMUST00000052829.10|Fam166b|ENSMUSG00000042788.13|family with sequence similarity 166, member B
mm39_v1_chr15_+_38219447_38219548	5.6017	Rfx3_Rfx1_Rfx4	ENSMUST00000081966.5|Odf1|ENSMUSG00000061923.5|outer dense fiber of sperm tails 1
mm39_v1_chr1_+_164135230_164135307	5.58417	Rfx3_Rfx1_Rfx4	ENSMUST00000193683.6|Nme7|ENSMUSG00000026575.16|NME/NM23 family member 7
mm39_v1_chr12_-_55867941_55867995	5.5146	Rfx3_Rfx1_Rfx4	ENSMUST00000085385.7|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1	ENSMUST00000110687.8|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1
mm39_v1_chr10_+_122514669_122514703	5.50268	Rfx3_Rfx1_Rfx4	ENSMUST00000161487.8|Ppm1h|ENSMUSG00000034613.13|protein phosphatase 1H (PP2C domain containing)	ENSMUST00000067918.12|Ppm1h|ENSMUSG00000034613.13|protein phosphatase 1H (PP2C domain containing)
mm39_v1_chr6_-_119307685_119307761	5.48308	Rfx3_Rfx1_Rfx4	ENSMUST00000112756.8|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2	ENSMUST00000068351.14|Lrtm2|ENSMUSG00000055003.15|leucine-rich repeats and transmembrane domains 2
mm39_v1_chr19_-_10554417_10554459	5.47379	Rfx3_Rfx1_Rfx4	ENSMUST00000236099.2|Tmem138|ENSMUSG00000024666.7|transmembrane protein 138
mm39_v1_chr2_-_164587836_164587859	5.46441	Rfx3_Rfx1_Rfx4	ENSMUST00000109328.8|Wfdc3|ENSMUSG00000076434.10|WAP four-disulfide core domain 3
mm39_v1_chr3_+_105778174_105778229	5.44586	Rfx3_Rfx1_Rfx4	ENSMUST00000164730.2|Adora3|ENSMUSG00000000562.6|adenosine A3 receptor	ENSMUST00000010279.10|Tmigd3|ENSMUSG00000074344.8|transmembrane and immunoglobulin domain containing 3
mm39_v1_chr5_-_97540230_97540244	5.43796	Rfx3_Rfx1_Rfx4	ENSMUST00000060265.6|Naa11|ENSMUSG00000046000.6|N(alpha)-acetyltransferase 11, NatA catalytic subunit
mm39_v1_chr16_+_43710163_43710183	5.37342	Rfx3_Rfx1_Rfx4	ENSMUST00000132859.8|Ccdc191|ENSMUSG00000022701.19|coiled-coil domain containing 191	ENSMUST00000178400.9|Ccdc191|ENSMUSG00000022701.19|coiled-coil domain containing 191
mm39_v1_chr9_-_56759229_56759296	5.3722	Rfx3_Rfx1_Rfx4	ENSMUST00000055036.7|Odf3l1|ENSMUSG00000045620.8|outer dense fiber of sperm tails 3-like 1
mm39_v1_chr17_-_26056056_26056269	5.36748	Rfx3_Rfx1_Rfx4	ENSMUST00000183929.8|Rhbdl1|ENSMUSG00000025735.14|rhomboid like 1	ENSMUST00000184865.2|Rhbdl1|ENSMUSG00000025735.14|rhomboid like 1	ENSMUST00000026831.14|Rhbdl1|ENSMUSG00000025735.14|rhomboid like 1
mm39_v1_chr9_-_105272435_105272488	5.34323	Rfx3_Rfx1_Rfx4	ENSMUST00000140851.3|Nek11|ENSMUSG00000035032.13|NIMA (never in mitosis gene a)-related expressed kinase 11
mm39_v1_chr4_-_12087911_12087991	5.32332	Rfx3_Rfx1_Rfx4	ENSMUST00000050686.10|Tmem67|ENSMUSG00000049488.15|transmembrane protein 67
mm39_v1_chrX_+_35592006_35592071	5.29846	Rfx3_Rfx1_Rfx4	ENSMUST00000016383.10|Lonrf3|ENSMUSG00000016239.12|LON peptidase N-terminal domain and ring finger 3
mm39_v1_chr19_-_10282218_10282318	5.27541	Rfx3_Rfx1_Rfx4	ENSMUST00000039327.11|Dagla|ENSMUSG00000035735.11|diacylglycerol lipase, alpha
mm39_v1_chr16_+_17437205_17437253	5.24046	Rfx3_Rfx1_Rfx4	ENSMUST00000006053.13|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000231311.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000163476.10|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000231257.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000165363.10|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000232043.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000090159.13|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4	ENSMUST00000232442.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4
mm39_v1_chr14_-_121976273_121976372	5.21964	Rfx3_Rfx1_Rfx4	ENSMUST00000212376.3|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9	ENSMUST00000239077.2|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9
mm39_v1_chr8_-_96161414_96161458	5.19446	Rfx3_Rfx1_Rfx4	ENSMUST00000211908.2|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20
mm39_v1_chr5_-_136199482_136199516	5.18606	Rfx3_Rfx1_Rfx4	ENSMUST00000196454.5|Orai2|ENSMUSG00000039747.12|ORAI calcium release-activated calcium modulator 2	ENSMUST00000197052.2|Orai2|ENSMUSG00000039747.12|ORAI calcium release-activated calcium modulator 2
mm39_v1_chr11_+_53410552_53410627	5.18528	Rfx3_Rfx1_Rfx4	ENSMUST00000108987.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000121334.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000117061.8|Septin8|ENSMUSG00000018398.19|septin 8
mm39_v1_chr3_-_107992662_107992728	5.1764	Rfx3_Rfx1_Rfx4	ENSMUST00000078912.7|Ampd2|ENSMUSG00000027889.18|adenosine monophosphate deaminase 2
mm39_v1_chr18_+_36098090_36098165	5.17422	Rfx3_Rfx1_Rfx4	ENSMUST00000176873.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000177432.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000175734.2|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2
mm39_v1_chr10_+_86541675_86541742	5.17414	Rfx3_Rfx1_Rfx4	ENSMUST00000075632.14|Ttc41|ENSMUSG00000044937.16|tetratricopeptide repeat domain 41	ENSMUST00000217747.2|Ttc41|ENSMUSG00000044937.16|tetratricopeptide repeat domain 41	ENSMUST00000061458.9|Ttc41|ENSMUSG00000044937.16|tetratricopeptide repeat domain 41
mm39_v1_chr18_-_70663209_70663355	5.17091	Rfx3_Rfx1_Rfx4	ENSMUST00000161542.8|Poli|ENSMUSG00000038425.19|polymerase (DNA directed), iota	ENSMUST00000159389.8|Poli|ENSMUSG00000038425.19|polymerase (DNA directed), iota
mm39_v1_chr14_-_78112327_78112381	5.16147	Rfx3_Rfx1_Rfx4	ENSMUST00000226459.2|Dnajc15|ENSMUSG00000022013.5|DnaJ heat shock protein family (Hsp40) member C15
mm39_v1_chr5_+_73808718_73808737	5.14407	Rfx3_Rfx1_Rfx4	ENSMUST00000071077.14|Spata18|ENSMUSG00000029155.17|spermatogenesis associated 18
mm39_v1_chr16_+_32315076_32315086	5.12235	Rfx3_Rfx1_Rfx4	ENSMUST00000064192.8|Zdhhc19|ENSMUSG00000052363.9|zinc finger, DHHC domain containing 19
mm39_v1_chr17_+_79244553_79244612	5.03429	Rfx3_Rfx1_Rfx4	ENSMUST00000024887.6|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233068.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7	ENSMUST00000233777.2|Ndufaf7|ENSMUSG00000024082.6|NADH:ubiquinone oxidoreductase complex assembly factor 7
mm39_v1_chr3_+_156267429_156267507	5.03384	Rfx3_Rfx1_Rfx4	ENSMUST00000074015.11|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1
mm39_v1_chr1_+_186947683_186947771	5.02599	Rfx3_Rfx1_Rfx4	ENSMUST00000065573.14|Gpatch2|ENSMUSG00000039210.17|G patch domain containing 2	ENSMUST00000110943.9|Gpatch2|ENSMUSG00000039210.17|G patch domain containing 2	ENSMUST00000044812.12|Gpatch2|ENSMUSG00000039210.17|G patch domain containing 2
mm39_v1_chr7_+_66872321_66872383	5.02402	Rfx3_Rfx1_Rfx4	ENSMUST00000207757.2|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4	ENSMUST00000058771.13|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4	ENSMUST00000207823.2|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4	ENSMUST00000208698.2|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4	ENSMUST00000208998.2|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4	ENSMUST00000179106.3|Lysmd4|ENSMUSG00000043831.13|LysM, putative peptidoglycan-binding, domain containing 4
mm39_v1_chr15_+_99122742_99122742	5.02231	Rfx3_Rfx1_Rfx4	ENSMUST00000041415.5|Kcnh3|ENSMUSG00000037579.8|potassium voltage-gated channel, subfamily H (eag-related), member 3
mm39_v1_chr1_+_84817547_84817604	5.01987	Rfx3_Rfx1_Rfx4	ENSMUST00000097672.4|Fbxo36|ENSMUSG00000073633.10|F-box protein 36
mm39_v1_chr9_-_72892617_72892684	4.98831	Rfx3_Rfx1_Rfx4	ENSMUST00000124565.3|Ccpg1os|ENSMUSG00000086158.3|cell cycle progression 1, opposite strand
mm39_v1_chr5_+_137756407_137756461	4.98042	Rfx3_Rfx1_Rfx4	ENSMUST00000141733.8|Tsc22d4|ENSMUSG00000029723.17|TSC22 domain family, member 4	ENSMUST00000110985.2|Tsc22d4|ENSMUSG00000029723.17|TSC22 domain family, member 4
mm39_v1_chr19_-_10554462_10554497	4.97157	Rfx3_Rfx1_Rfx4	ENSMUST00000236185.2|Tmem138|ENSMUSG00000024666.7|transmembrane protein 138
mm39_v1_chr3_+_98289755_98289836	4.96624	Rfx3_Rfx1_Rfx4	ENSMUST00000056096.15|Zfp697|ENSMUSG00000050064.15|zinc finger protein 697
mm39_v1_chr12_-_17061545_17061563	4.95374	Rfx3_Rfx1_Rfx4	ENSMUST00000190691.2|2410004P03Rik|ENSMUSG00000071398.9|RIKEN cDNA 2410004P03 gene
mm39_v1_chr7_-_140462187_140462219	4.95063	Rfx3_Rfx1_Rfx4	ENSMUST00000211179.2|Sirt3|ENSMUSG00000025486.18|sirtuin 3
mm39_v1_chr11_-_97520511_97520541	4.90932	Rfx3_Rfx1_Rfx4	ENSMUST00000052281.6|Epop|ENSMUSG00000043439.6|elongin BC and polycomb repressive complex 2 associated protein
mm39_v1_chr1_+_37338964_37339022	4.84651	Rfx3_Rfx1_Rfx4	ENSMUST00000027287.11|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I	ENSMUST00000140264.8|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I
mm39_v1_chr11_+_87938128_87938199	4.83588	Rfx3_Rfx1_Rfx4	ENSMUST00000139129.9|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr6_-_90787100_90787142	4.73639	Rfx3_Rfx1_Rfx4	ENSMUST00000101151.10|Iqsec1|ENSMUSG00000034312.16|IQ motif and Sec7 domain 1
mm39_v1_chr3_+_156267587_156267631	4.68188	Rfx3_Rfx1_Rfx4	ENSMUST00000041425.12|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1	ENSMUST00000106065.2|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1
mm39_v1_chr8_+_13755884_13755967	4.65576	Rfx3_Rfx1_Rfx4	ENSMUST00000166277.5|Cfap97d2|ENSMUSG00000090336.6|CFAP97 domain containing 2	ENSMUST00000214337.2|Cfap97d2|ENSMUSG00000090336.6|CFAP97 domain containing 2
mm39_v1_chr6_-_122317457_122317471	4.632	Rfx3_Rfx1_Rfx4	ENSMUST00000160843.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr9_-_64248570_64248594	4.62789	Rfx3_Rfx1_Rfx4	ENSMUST00000068367.14|Dis3l|ENSMUSG00000032396.18|DIS3 like exosome 3'-5' exoribonuclease
mm39_v1_chr12_-_31684588_31684679	4.60594	Rfx3_Rfx1_Rfx4	ENSMUST00000020979.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29	ENSMUST00000177962.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29
mm39_v1_chr19_-_60215097_60215138	4.58314	Rfx3_Rfx1_Rfx4	ENSMUST00000238054.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A	ENSMUST00000065286.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A
mm39_v1_chr1_+_179936757_179936830	4.57624	Rfx3_Rfx1_Rfx4	ENSMUST00000143176.8|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000135056.8|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr7_-_44578834_44578942	4.51078	Rfx3_Rfx1_Rfx4	ENSMUST00000107857.11|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000167930.8|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000085399.13|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000166972.9|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit
mm39_v1_chr8_-_79547707_79547769	4.51037	Rfx3_Rfx1_Rfx4	ENSMUST00000130325.8|Lsm6|ENSMUSG00000031683.17|LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	ENSMUST00000051867.7|Lsm6|ENSMUSG00000031683.17|LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr10_-_80578057_80578113	4.49085	Rfx3_Rfx1_Rfx4	ENSMUST00000020420.9|Ap3d1|ENSMUSG00000020198.9|adaptor-related protein complex 3, delta 1 subunit
mm39_v1_chr12_-_46863726_46863743	4.48908	Rfx3_Rfx1_Rfx4	ENSMUST00000219330.2|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr3_+_68375495_68375542	4.45937	Rfx3_Rfx1_Rfx4	ENSMUST00000182532.8|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr15_+_79113341_79113373	4.44678	Rfx3_Rfx1_Rfx4	ENSMUST00000163571.8|Pick1|ENSMUSG00000068206.14|protein interacting with C kinase 1
mm39_v1_chr13_-_107073415_107073466	4.44206	Rfx3_Rfx1_Rfx4	ENSMUST00000080856.14|Ipo11|ENSMUSG00000042590.18|importin 11
mm39_v1_chr3_+_89970088_89970148	4.41242	Rfx3_Rfx1_Rfx4	ENSMUST00000238911.2|1700094D03Rik|ENSMUSG00000118506.2|RIKEN cDNA 1700094D03 gene	ENSMUST00000029551.3|1700094D03Rik|ENSMUSG00000118506.2|RIKEN cDNA 1700094D03 gene
mm39_v1_chr8_-_96161466_96161497	4.40222	Rfx3_Rfx1_Rfx4	ENSMUST00000213086.2|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20	ENSMUST00000034249.8|Cfap20|ENSMUSG00000031796.8|cilia and flagella associated protein 20
mm39_v1_chr7_-_118304930_118305009	4.38185	Rfx3_Rfx1_Rfx4	ENSMUST00000207323.2|Gde1|ENSMUSG00000033917.16|glycerophosphodiester phosphodiesterase 1	ENSMUST00000038791.15|Gde1|ENSMUSG00000033917.16|glycerophosphodiester phosphodiesterase 1
mm39_v1_chr9_+_53316572_53316623	4.37672	Rfx3_Rfx1_Rfx4	ENSMUST00000005262.2|4930550C14Rik|ENSMUSG00000005131.5|RIKEN cDNA 4930550C14 gene	ENSMUST00000217318.2|4930550C14Rik|ENSMUSG00000005131.5|RIKEN cDNA 4930550C14 gene
mm39_v1_chr18_-_32595515_32595525	4.37245	Rfx3_Rfx1_Rfx4	ENSMUST00000207669.2|Gm35060|ENSMUSG00000109238.3|predicted gene, 35060
mm39_v1_chr3_-_146475974_146476016	4.3321	Rfx3_Rfx1_Rfx4	ENSMUST00000106137.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr4_-_56741398_56741443	4.32852	Rfx3_Rfx1_Rfx4	ENSMUST00000095080.5|Actl7b|ENSMUSG00000070980.5|actin-like 7b
mm39_v1_chr15_+_75865604_75865680	4.23609	Rfx3_Rfx1_Rfx4	ENSMUST00000089669.6|Mapk15|ENSMUSG00000063704.14|mitogen-activated protein kinase 15
mm39_v1_chr10_-_80895949_80896039	4.2239	Rfx3_Rfx1_Rfx4	ENSMUST00000219401.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000220317.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000005067.6|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000218208.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm39_v1_chr19_+_9979033_9979067	4.22148	Rfx3_Rfx1_Rfx4	ENSMUST00000121418.8|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1
mm39_v1_chr18_-_70663382_70663505	4.21753	Rfx3_Rfx1_Rfx4	ENSMUST00000043286.15|Poli|ENSMUSG00000038425.19|polymerase (DNA directed), iota
mm39_v1_chr10_-_80165257_80165332	4.21306	Rfx3_Rfx1_Rfx4	ENSMUST00000020340.15|Pcsk4|ENSMUSG00000020131.15|proprotein convertase subtilisin/kexin type 4
mm39_v1_chr19_-_10554726_10554778	4.21219	Rfx3_Rfx1_Rfx4	ENSMUST00000025568.3|Tmem138|ENSMUSG00000024666.7|transmembrane protein 138
mm39_v1_chrX_-_132799144_132799178	4.19231	Rfx3_Rfx1_Rfx4	ENSMUST00000087557.12|Tspan6|ENSMUSG00000067377.13|tetraspanin 6
mm39_v1_chr14_-_60434622_60434634	4.17539	Rfx3_Rfx1_Rfx4	ENSMUST00000131670.3|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr3_+_67281449_67281487	4.17019	Rfx3_Rfx1_Rfx4	ENSMUST00000061322.10|Mlf1|ENSMUSG00000048416.16|myeloid leukemia factor 1
mm39_v1_chr5_+_27109679_27109709	4.15237	Rfx3_Rfx1_Rfx4	ENSMUST00000120555.8|Dpp6|ENSMUSG00000061576.16|dipeptidylpeptidase 6
mm39_v1_chr14_-_57015748_57015824	4.15103	Rfx3_Rfx1_Rfx4	ENSMUST00000022507.13|Pspc1|ENSMUSG00000021938.13|paraspeckle protein 1	ENSMUST00000163924.2|Pspc1|ENSMUSG00000021938.13|paraspeckle protein 1
mm39_v1_chr4_+_155171034_155171067	4.1356	Rfx3_Rfx1_Rfx4	ENSMUST00000030915.11|Morn1|ENSMUSG00000029049.15|MORN repeat containing 1	ENSMUST00000155775.8|Morn1|ENSMUSG00000029049.15|MORN repeat containing 1	ENSMUST00000127457.2|Morn1|ENSMUSG00000029049.15|MORN repeat containing 1
mm39_v1_chrX_+_85087792_85087809	4.12804	Rfx3_Rfx1_Rfx4	ENSMUST00000047945.2|Samt3|ENSMUSG00000035454.2|spermatogenesis associated multipass transmembrane protein 3
mm39_v1_chr10_-_128383508_128383643	4.10588	Rfx3_Rfx1_Rfx4	ENSMUST00000152539.8|Zc3h10|ENSMUSG00000039810.12|zinc finger CCCH type containing 10	ENSMUST00000133458.2|Zc3h10|ENSMUSG00000039810.12|zinc finger CCCH type containing 10	ENSMUST00000040572.10|Zc3h10|ENSMUSG00000039810.12|zinc finger CCCH type containing 10
mm39_v1_chr7_+_18810097_18810163	4.1028	Rfx3_Rfx1_Rfx4	ENSMUST00000032570.14|Dmwd|ENSMUSG00000030410.17|dystrophia myotonica-containing WD repeat motif
mm39_v1_chr9_-_103569984_103570011	4.08265	Rfx3_Rfx1_Rfx4	ENSMUST00000049452.15|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chrX_-_121307036_121307145	4.08096	Rfx3_Rfx1_Rfx4	ENSMUST00000079490.6|Nap1l3|ENSMUSG00000055733.7|nucleosome assembly protein 1-like 3
mm39_v1_chr11_+_87744033_87744075	4.07319	Rfx3_Rfx1_Rfx4	ENSMUST00000038196.7|Mks1|ENSMUSG00000034121.13|MKS transition zone complex subunit 1
mm39_v1_chr13_-_36301466_36301570	4.06501	Rfx3_Rfx1_Rfx4	ENSMUST00000053265.8|Lyrm4|ENSMUSG00000046573.8|LYR motif containing 4
mm39_v1_chr7_+_126447080_126447134	4.06228	Rfx3_Rfx1_Rfx4	ENSMUST00000147257.2|Doc2a|ENSMUSG00000052301.15|double C2, alpha	ENSMUST00000139174.2|Doc2a|ENSMUSG00000052301.15|double C2, alpha
mm39_v1_chr4_+_32982981_32983155	4.04081	Rfx3_Rfx1_Rfx4	ENSMUST00000098190.10|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D	ENSMUST00000029946.14|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D
mm39_v1_chr1_+_75213044_75213074	4.04033	Rfx3_Rfx1_Rfx4	ENSMUST00000188931.7|Dnajb2|ENSMUSG00000026203.17|DnaJ heat shock protein family (Hsp40) member B2
mm39_v1_chr10_+_86893907_86893931	4.02443	Rfx3_Rfx1_Rfx4	ENSMUST00000189456.7|1700113H08Rik|ENSMUSG00000047129.12|RIKEN cDNA 1700113H08 gene	ENSMUST00000169849.3|1700113H08Rik|ENSMUSG00000047129.12|RIKEN cDNA 1700113H08 gene
mm39_v1_chr11_-_101490011_101490082	3.99099	Rfx3_Rfx1_Rfx4	ENSMUST00000209862.2|Gm11634|ENSMUSG00000085486.3|predicted gene 11634	ENSMUST00000154147.2|Gm11634|ENSMUSG00000085486.3|predicted gene 11634
mm39_v1_chr2_-_168443540_168443577	3.98776	Rfx3_Rfx1_Rfx4	ENSMUST00000171689.8|Nfatc2|ENSMUSG00000027544.17|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2	ENSMUST00000137451.2|Nfatc2|ENSMUSG00000027544.17|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm39_v1_chr11_+_53410697_53410754	3.96353	Rfx3_Rfx1_Rfx4	ENSMUST00000120878.9|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000147912.2|Septin8|ENSMUSG00000018398.19|septin 8
mm39_v1_chr10_-_78588884_78588910	3.95453	Rfx3_Rfx1_Rfx4	ENSMUST00000105383.4|Ccdc105|ENSMUSG00000078442.4|coiled-coil domain containing 105
mm39_v1_chrX_-_132799041_132799126	3.93608	Rfx3_Rfx1_Rfx4	ENSMUST00000176718.8|Tspan6|ENSMUSG00000067377.13|tetraspanin 6	ENSMUST00000176641.2|Tspan6|ENSMUSG00000067377.13|tetraspanin 6
mm39_v1_chr9_-_42383494_42383561	3.92234	Rfx3_Rfx1_Rfx4	ENSMUST00000128959.8|Tbcel|ENSMUSG00000037287.16|tubulin folding cofactor E-like	ENSMUST00000066148.12|Tbcel|ENSMUSG00000037287.16|tubulin folding cofactor E-like	ENSMUST00000138506.8|Tbcel|ENSMUSG00000037287.16|tubulin folding cofactor E-like
mm39_v1_chr11_+_109541400_109541405	3.92106	Rfx3_Rfx1_Rfx4	ENSMUST00000106676.8|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chrX_-_7999009_7999096	3.92019	Rfx3_Rfx1_Rfx4	ENSMUST00000130832.8|Wdr13|ENSMUSG00000031166.14|WD repeat domain 13	ENSMUST00000033506.13|Wdr13|ENSMUSG00000031166.14|WD repeat domain 13	ENSMUST00000115623.8|Wdr13|ENSMUSG00000031166.14|WD repeat domain 13	ENSMUST00000153839.2|Wdr13|ENSMUSG00000031166.14|WD repeat domain 13
mm39_v1_chr8_-_84184978_84184994	3.9188	Rfx3_Rfx1_Rfx4	ENSMUST00000081506.11|Scoc|ENSMUSG00000063253.12|short coiled-coil protein
mm39_v1_chr19_+_8817883_8817913	3.90928	Rfx3_Rfx1_Rfx4	ENSMUST00000086058.13|Bscl2|ENSMUSG00000071657.13|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
mm39_v1_chr12_-_69245191_69245203	3.88183	Rfx3_Rfx1_Rfx4	ENSMUST00000021356.6|Dnaaf2|ENSMUSG00000020973.8|dynein, axonemal assembly factor 2
mm39_v1_chrX_-_135893776_135893838	3.8699	Rfx3_Rfx1_Rfx4	ENSMUST00000171738.2|Slc25a53|ENSMUSG00000044348.15|solute carrier family 25, member 53	ENSMUST00000056674.6|Slc25a53|ENSMUSG00000044348.15|solute carrier family 25, member 53	ENSMUST00000129807.2|Slc25a53|ENSMUSG00000044348.15|solute carrier family 25, member 53
mm39_v1_chr3_+_95041399_95041399	3.86194	Rfx3_Rfx1_Rfx4	ENSMUST00000066386.6|Lysmd1|ENSMUSG00000053769.6|LysM, putative peptidoglycan-binding, domain containing 1
mm39_v1_chr15_-_77129786_77129804	3.85832	Rfx3_Rfx1_Rfx4	ENSMUST00000228558.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr3_+_30702035_30702083	3.82788	Rfx3_Rfx1_Rfx4	ENSMUST00000108265.3|Lrriq4|ENSMUSG00000027703.17|leucine-rich repeats and IQ motif containing 4
mm39_v1_chr6_-_145379805_145379816	3.82489	Rfx3_Rfx1_Rfx4	ENSMUST00000149666.2|Lmntd1|ENSMUSG00000054966.14|lamin tail domain containing 1
mm39_v1_chr11_+_101442961_101443011	3.82128	Rfx3_Rfx1_Rfx4	ENSMUST00000103099.8|Nbr1|ENSMUSG00000017119.21|NBR1, autophagy cargo receptor
mm39_v1_chr2_-_112198366_112198381	3.81141	Rfx3_Rfx1_Rfx4	ENSMUST00000028551.4|Emc4|ENSMUSG00000027131.4|ER membrane protein complex subunit 4
mm39_v1_chr16_-_17379103_17379118	3.80087	Rfx3_Rfx1_Rfx4	ENSMUST00000232637.2|Lrrc74b|ENSMUSG00000022759.16|leucine rich repeat containing 74B	ENSMUST00000100123.10|Lrrc74b|ENSMUSG00000022759.16|leucine rich repeat containing 74B	ENSMUST00000023442.13|Lrrc74b|ENSMUSG00000022759.16|leucine rich repeat containing 74B
mm39_v1_chr6_+_90443293_90443382	3.79681	Rfx3_Rfx1_Rfx4	ENSMUST00000203607.2|Klf15|ENSMUSG00000030087.12|Kruppel-like factor 15
mm39_v1_chr2_-_139908615_139908725	3.77796	Rfx3_Rfx1_Rfx4	ENSMUST00000046656.9|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1	ENSMUST00000099304.4|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1	ENSMUST00000110079.9|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1
mm39_v1_chr5_-_122402451_122402525	3.64484	Rfx3_Rfx1_Rfx4	ENSMUST00000111738.8|Tctn1|ENSMUSG00000038593.19|tectonic family member 1
mm39_v1_chr8_+_95711037_95711105	3.64291	Rfx3_Rfx1_Rfx4	ENSMUST00000211944.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr7_-_140462221_140462244	3.63698	Rfx3_Rfx1_Rfx4	ENSMUST00000026559.14|Sirt3|ENSMUSG00000025486.18|sirtuin 3
mm39_v1_chr7_-_45343785_45343835	3.603	Rfx3_Rfx1_Rfx4	ENSMUST00000040636.9|Sec1|ENSMUSG00000040364.9|secretory blood group 1
mm39_v1_chr17_+_34174797_34174900	3.60274	Rfx3_Rfx1_Rfx4	ENSMUST00000173196.3|Vps52|ENSMUSG00000024319.19|VPS52 GARP complex subunit
mm39_v1_chr4_+_152181155_152181176	3.59789	Rfx3_Rfx1_Rfx4	ENSMUST00000105661.10|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	ENSMUST00000084115.4|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr2_+_80145805_80145855	3.59173	Rfx3_Rfx1_Rfx4	ENSMUST00000028392.8|Dnajc10|ENSMUSG00000027006.14|DnaJ heat shock protein family (Hsp40) member C10
mm39_v1_chr5_+_34919078_34919124	3.56981	Rfx3_Rfx1_Rfx4	ENSMUST00000080036.3|Htt|ENSMUSG00000029104.16|huntingtin
mm39_v1_chr5_-_135807092_135807181	3.52197	Rfx3_Rfx1_Rfx4	ENSMUST00000053906.11|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000177559.8|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000111161.9|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000111162.8|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000111163.9|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1
mm39_v1_chr11_+_4110346_4110414	3.50183	Rfx3_Rfx1_Rfx4	ENSMUST00000002198.4|Sf3a1|ENSMUSG00000002129.12|splicing factor 3a, subunit 1
mm39_v1_chr7_-_140461769_140461784	3.49427	Rfx3_Rfx1_Rfx4	ENSMUST00000106048.10|Sirt3|ENSMUSG00000025486.18|sirtuin 3	ENSMUST00000147331.9|Sirt3|ENSMUSG00000025486.18|sirtuin 3	ENSMUST00000137710.2|Sirt3|ENSMUSG00000025486.18|sirtuin 3
mm39_v1_chr9_+_124195807_124195903	3.48178	Rfx3_Rfx1_Rfx4	ENSMUST00000239563.2|Ppp2r3d|ENSMUSG00000093803.6|protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
mm39_v1_chr8_+_41692755_41692815	3.47909	Rfx3_Rfx1_Rfx4	ENSMUST00000210862.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000045218.9|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000211247.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1
mm39_v1_chrX_+_164953444_164953508	3.41947	Rfx3_Rfx1_Rfx4	ENSMUST00000130880.9|Gemin8|ENSMUSG00000040621.15|gem nuclear organelle associated protein 8	ENSMUST00000056410.11|Gemin8|ENSMUSG00000040621.15|gem nuclear organelle associated protein 8	ENSMUST00000096252.10|Gemin8|ENSMUSG00000040621.15|gem nuclear organelle associated protein 8	ENSMUST00000087169.11|Gemin8|ENSMUSG00000040621.15|gem nuclear organelle associated protein 8
mm39_v1_chr16_+_43710299_43710310	3.41936	Rfx3_Rfx1_Rfx4	ENSMUST00000151183.2|Ccdc191|ENSMUSG00000022701.19|coiled-coil domain containing 191
mm39_v1_chr4_+_154059619_154059705	3.36211	Rfx3_Rfx1_Rfx4	ENSMUST00000047497.15|Cep104|ENSMUSG00000039523.17|centrosomal protein 104
mm39_v1_chr2_-_106800736_106800752	3.35418	Rfx3_Rfx1_Rfx4	ENSMUST00000093883.4|Arl14ep|ENSMUSG00000027122.16|ADP-ribosylation factor-like 14 effector protein
mm39_v1_chr9_+_104446682_104446825	3.35079	Rfx3_Rfx1_Rfx4	ENSMUST00000057742.15|Cpne4|ENSMUSG00000032564.17|copine IV
mm39_v1_chr1_-_155293141_155293179	3.33786	Rfx3_Rfx1_Rfx4	ENSMUST00000111775.8|Xpr1|ENSMUSG00000026469.15|xenotropic and polytropic retrovirus receptor 1	ENSMUST00000111774.2|Xpr1|ENSMUSG00000026469.15|xenotropic and polytropic retrovirus receptor 1
mm39_v1_chr10_-_56104732_56104791	3.27477	Rfx3_Rfx1_Rfx4	ENSMUST00000099739.5|Tbc1d32|ENSMUSG00000038122.10|TBC1 domain family, member 32
mm39_v1_chr11_+_49684984_49685014	3.23886	Rfx3_Rfx1_Rfx4	ENSMUST00000020629.5|Gfpt2|ENSMUSG00000020363.7|glutamine fructose-6-phosphate transaminase 2
mm39_v1_chr12_-_55867881_55867903	3.22961	Rfx3_Rfx1_Rfx4	ENSMUST00000219432.2|Ralgapa1|ENSMUSG00000021027.18|Ral GTPase activating protein, alpha subunit 1
mm39_v1_chr7_-_29931612_29931697	3.22806	Rfx3_Rfx1_Rfx4	ENSMUST00000006254.6|Tbcb|ENSMUSG00000006095.13|tubulin folding cofactor B
mm39_v1_chr15_+_100659729_100659750	3.21158	Rfx3_Rfx1_Rfx4	ENSMUST00000161564.2|Slc4a8|ENSMUSG00000023032.13|solute carrier family 4 (anion exchanger), member 8
mm39_v1_chr12_-_65012270_65012312	3.19823	Rfx3_Rfx1_Rfx4	ENSMUST00000222508.2|Klhl28|ENSMUSG00000020948.10|kelch-like 28
mm39_v1_chr19_+_47167444_47167465	3.19318	Rfx3_Rfx1_Rfx4	ENSMUST00000235326.2|Neurl1a|ENSMUSG00000006435.17|neuralized E3 ubiquitin protein ligase 1A
mm39_v1_chr17_+_34174782_34174793	3.15926	Rfx3_Rfx1_Rfx4	ENSMUST00000025178.17|Vps52|ENSMUSG00000024319.19|VPS52 GARP complex subunit
mm39_v1_chr9_-_24414423_24414528	3.15478	Rfx3_Rfx1_Rfx4	ENSMUST00000142064.8|Dpy19l1|ENSMUSG00000043067.16|dpy-19-like 1 (C. elegans)	ENSMUST00000170356.2|Dpy19l1|ENSMUSG00000043067.16|dpy-19-like 1 (C. elegans)
mm39_v1_chr16_-_91525655_91525690	3.14341	Rfx3_Rfx1_Rfx4	ENSMUST00000117644.8|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1
mm39_v1_chr16_-_43709968_43710048	3.09364	Rfx3_Rfx1_Rfx4	ENSMUST00000023387.14|Qtrt2|ENSMUSG00000022704.17|queuine tRNA-ribosyltransferase accessory subunit 2
mm39_v1_chr6_-_30509705_30509732	3.08287	Rfx3_Rfx1_Rfx4	ENSMUST00000064330.13|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209	ENSMUST00000102991.9|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209	ENSMUST00000115157.8|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209	ENSMUST00000148638.2|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209
mm39_v1_chr11_+_101169918_101169973	3.076	Rfx3_Rfx1_Rfx4	ENSMUST00000103107.5|Cntd1|ENSMUSG00000078653.5|cyclin N-terminal domain containing 1
mm39_v1_chr15_-_77129706_77129747	3.05663	Rfx3_Rfx1_Rfx4	ENSMUST00000228361.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr5_+_135661472_135661501	3.05295	Rfx3_Rfx1_Rfx4	ENSMUST00000043707.7|Rhbdd2|ENSMUSG00000039917.11|rhomboid domain containing 2
mm39_v1_chrX_+_72166674_72166674	3.03087	Rfx3_Rfx1_Rfx4	ENSMUST00000179117.2|Pwwp4a|ENSMUSG00000067771.10|PWWP domain containing 4A
mm39_v1_chrX_-_73689241_73689241	3.02513	Rfx3_Rfx1_Rfx4	ENSMUST00000114119.2|Pwwp4c|ENSMUSG00000079534.2|PWWP domain containing 4C
mm39_v1_chr4_-_41314877_41314889	3.00439	Rfx3_Rfx1_Rfx4	ENSMUST00000030145.9|Dcaf12|ENSMUSG00000028436.9|DDB1 and CUL4 associated factor 12
mm39_v1_chr15_+_25752963_25753065	3.00285	Rfx3_Rfx1_Rfx4	ENSMUST00000022882.12|Myo10|ENSMUSG00000022272.18|myosin X	ENSMUST00000135173.8|Myo10|ENSMUSG00000022272.18|myosin X
mm39_v1_chr2_-_30068433_30068478	2.97775	Rfx3_Rfx1_Rfx4	ENSMUST00000100220.5|Spout1|ENSMUSG00000039660.17|SPOUT domain containing methyltransferase 1
mm39_v1_chr5_-_135807194_135807245	2.97155	Rfx3_Rfx1_Rfx4	ENSMUST00000178796.2|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000178515.8|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1	ENSMUST00000111164.9|Styxl1|ENSMUSG00000019178.18|serine/threonine/tyrosine interacting-like 1
mm39_v1_chr9_+_104446957_104446991	2.90706	Rfx3_Rfx1_Rfx4	ENSMUST00000077190.7|Cpne4|ENSMUSG00000032564.17|copine IV
mm39_v1_chr2_+_119119218_119119252	2.90286	Rfx3_Rfx1_Rfx4	ENSMUST00000037280.5|Vps18|ENSMUSG00000034216.13|VPS18 CORVET/HOPS core subunit
mm39_v1_chr11_+_109541747_109541829	2.9004	Rfx3_Rfx1_Rfx4	ENSMUST00000049527.7|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chr5_-_120772300_120772359	2.88884	Rfx3_Rfx1_Rfx4	ENSMUST00000177908.2|Cfap73|ENSMUSG00000094282.2|cilia and flagella associated protein 73
mm39_v1_chr1_+_186947934_186947945	2.87989	Rfx3_Rfx1_Rfx4	ENSMUST00000160471.8|Gpatch2|ENSMUSG00000039210.17|G patch domain containing 2
mm39_v1_chr1_-_152642073_152642119	2.87969	Rfx3_Rfx1_Rfx4	ENSMUST00000111857.3|Rgl1|ENSMUSG00000026482.14|ral guanine nucleotide dissociation stimulator,-like 1
mm39_v1_chr9_-_20553576_20553618	2.87927	Rfx3_Rfx1_Rfx4	ENSMUST00000155301.8|Fbxl12|ENSMUSG00000066892.15|F-box and leucine-rich repeat protein 12
mm39_v1_chr6_-_30509737_30509782	2.86523	Rfx3_Rfx1_Rfx4	ENSMUST00000154547.3|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209	ENSMUST00000115160.10|Tmem209|ENSMUSG00000029782.21|transmembrane protein 209
mm39_v1_chrX_-_138963461_138963475	2.863	Rfx3_Rfx1_Rfx4	ENSMUST00000133780.8|Nup62cl|ENSMUSG00000072944.12|nucleoporin 62 C-terminal like
mm39_v1_chr4_+_56802338_56802375	2.85896	Rfx3_Rfx1_Rfx4	ENSMUST00000045368.12|Abitram|ENSMUSG00000038827.12|actin binding transcription modulator
mm39_v1_chr2_-_151586063_151586125	2.83759	Rfx3_Rfx1_Rfx4	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr11_+_85061922_85061930	2.83711	Rfx3_Rfx1_Rfx4	ENSMUST00000018623.4|1700125H20Rik|ENSMUSG00000018479.13|RIKEN cDNA 1700125H20 gene
mm39_v1_chr4_-_153567221_153567268	2.83104	Rfx3_Rfx1_Rfx4	ENSMUST00000105646.3|Ajap1|ENSMUSG00000039546.10|adherens junction associated protein 1
mm39_v1_chr1_-_4479445_4479513	2.78505	Rfx3_Rfx1_Rfx4	ENSMUST00000208660.2|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr4_-_99717359_99717428	2.78008	Rfx3_Rfx1_Rfx4	ENSMUST00000146258.2|Itgb3bp|ENSMUSG00000028549.18|integrin beta 3 binding protein (beta3-endonexin)
mm39_v1_chr19_+_4905158_4905298	2.77878	Rfx3_Rfx1_Rfx4	ENSMUST00000119694.3|Ctsf|ENSMUSG00000083282.4|cathepsin F	ENSMUST00000237504.2|Ctsf|ENSMUSG00000083282.4|cathepsin F	ENSMUST00000237011.2|Ctsf|ENSMUSG00000083282.4|cathepsin F
mm39_v1_chr11_-_74787877_74787920	2.77846	Rfx3_Rfx1_Rfx4	ENSMUST00000057631.12|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2	ENSMUST00000081799.6|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2
mm39_v1_chr8_+_95720864_95720929	2.77477	Rfx3_Rfx1_Rfx4	ENSMUST00000212141.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr8_+_95721019_95721106	2.76556	Rfx3_Rfx1_Rfx4	ENSMUST00000212976.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1	ENSMUST00000212995.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr11_-_120358239_120358426	2.74221	Rfx3_Rfx1_Rfx4	ENSMUST00000076921.7|Arl16|ENSMUSG00000057594.13|ADP-ribosylation factor-like 16
mm39_v1_chr11_+_120358461_120358545	2.72495	Rfx3_Rfx1_Rfx4	ENSMUST00000140862.7|Hgs|ENSMUSG00000025793.18|HGF-regulated tyrosine kinase substrate	ENSMUST00000106205.9|Hgs|ENSMUSG00000025793.18|HGF-regulated tyrosine kinase substrate	ENSMUST00000106203.9|Hgs|ENSMUSG00000025793.18|HGF-regulated tyrosine kinase substrate
mm39_v1_chr13_+_113124336_113124374	2.70521	Rfx3_Rfx1_Rfx4	ENSMUST00000038404.6|Ccno|ENSMUSG00000042417.6|cyclin O
mm39_v1_chr9_+_59485475_59485620	2.67997	Rfx3_Rfx1_Rfx4	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr4_-_141518202_141518252	2.66261	Rfx3_Rfx1_Rfx4	ENSMUST00000038014.11|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16	ENSMUST00000153880.2|Dnajc16|ENSMUSG00000040697.11|DnaJ heat shock protein family (Hsp40) member C16
mm39_v1_chr1_-_133728779_133728805	2.65052	Rfx3_Rfx1_Rfx4	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr3_+_106592259_106592337	2.64531	Rfx3_Rfx1_Rfx4	ENSMUST00000098751.10|Lrif1|ENSMUSG00000056260.16|ligand dependent nuclear receptor interacting factor 1
mm39_v1_chr2_-_26270612_26270666	2.60579	Rfx3_Rfx1_Rfx4	ENSMUST00000114115.9|Snapc4|ENSMUSG00000036281.14|small nuclear RNA activating complex, polypeptide 4	ENSMUST00000035427.11|Snapc4|ENSMUSG00000036281.14|small nuclear RNA activating complex, polypeptide 4
mm39_v1_chr18_+_84970235_84970256	2.59887	Rfx3_Rfx1_Rfx4	ENSMUST00000223789.3|Fbxo15|ENSMUSG00000034391.13|F-box protein 15
mm39_v1_chrX_+_125947591_125947621	2.58634	Rfx3_Rfx1_Rfx4	ENSMUST00000096332.2|Gm382|ENSMUSG00000062791.5|predicted gene 382
mm39_v1_chr13_+_55517545_55517589	2.58429	Rfx3_Rfx1_Rfx4	ENSMUST00000063771.14|Rgs14|ENSMUSG00000052087.15|regulator of G-protein signaling 14
mm39_v1_chr10_+_81410549_81410576	2.57731	Rfx3_Rfx1_Rfx4	ENSMUST00000131794.8|Tle2|ENSMUSG00000034771.16|transducin-like enhancer of split 2	ENSMUST00000136341.8|Tle2|ENSMUSG00000034771.16|transducin-like enhancer of split 2
mm39_v1_chr1_-_156248716_156248729	2.57028	Rfx3_Rfx1_Rfx4	ENSMUST00000178036.8|Axdnd1|ENSMUSG00000026601.15|axonemal dynein light chain domain containing 1
mm39_v1_chr8_+_124059414_124059480	2.54986	Rfx3_Rfx1_Rfx4	ENSMUST00000010298.7|Spire2|ENSMUSG00000010154.8|spire type actin nucleation factor 2
mm39_v1_chr5_+_130108211_130108257	2.52209	Rfx3_Rfx1_Rfx4	ENSMUST00000040721.9|Tpst1|ENSMUSG00000034118.16|protein-tyrosine sulfotransferase 1
mm39_v1_chr16_+_14398085_14398085	2.50188	Rfx3_Rfx1_Rfx4	ENSMUST00000147024.8|A630010A05Rik|ENSMUSG00000075395.12|RIKEN cDNA A630010A05 gene
mm39_v1_chr6_+_48372520_48372580	2.49762	Rfx3_Rfx1_Rfx4	ENSMUST00000114571.8|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1	ENSMUST00000031815.12|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1	ENSMUST00000203371.3|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr17_-_36290571_36290723	2.49308	Rfx3_Rfx1_Rfx4	ENSMUST00000173724.2|Prr3|ENSMUSG00000038500.16|proline-rich polypeptide 3	ENSMUST00000172900.8|Prr3|ENSMUSG00000038500.16|proline-rich polypeptide 3	ENSMUST00000174849.8|Prr3|ENSMUSG00000038500.16|proline-rich polypeptide 3
mm39_v1_chr15_+_79113563_79113622	2.48274	Rfx3_Rfx1_Rfx4	ENSMUST00000018295.14|Pick1|ENSMUSG00000068206.14|protein interacting with C kinase 1	ENSMUST00000053926.12|Gm49486|ENSMUSG00000116121.2|predicted gene, 49486
mm39_v1_chr3_-_146476331_146476536	2.47138	Rfx3_Rfx1_Rfx4	ENSMUST00000106138.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr16_+_4559426_4559452	2.45014	Rfx3_Rfx1_Rfx4	ENSMUST00000120232.8|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2
mm39_v1_chr8_+_85786684_85786716	2.44536	Rfx3_Rfx1_Rfx4	ENSMUST00000095220.4|Fbxw9|ENSMUSG00000008167.15|F-box and WD-40 domain protein 9
mm39_v1_chr1_-_31261678_31261701	2.44267	Rfx3_Rfx1_Rfx4	ENSMUST00000187892.8|4931428L18Rik|ENSMUSG00000086727.9|RIKEN cDNA 4931428L18 gene	ENSMUST00000233331.2|4931428L18Rik|ENSMUSG00000086727.9|RIKEN cDNA 4931428L18 gene
mm39_v1_chr14_-_57353340_57353340	2.43382	Rfx3_Rfx1_Rfx4	ENSMUST00000159455.2|Gm4491|ENSMUSG00000089840.2|predicted gene 4491
mm39_v1_chr9_-_87137515_87137589	2.41357	Rfx3_Rfx1_Rfx4	ENSMUST00000093802.6|Cep162|ENSMUSG00000056919.10|centrosomal protein 162
mm39_v1_chrX_-_73525005_73525005	2.38057	Rfx3_Rfx1_Rfx4	ENSMUST00000114125.2|Ctag2l1|ENSMUSG00000079536.2|CTAG2 like 1
mm39_v1_chr15_-_83006957_83007002	2.37628	Rfx3_Rfx1_Rfx4	ENSMUST00000018184.10|Rrp7a|ENSMUSG00000018040.10|ribosomal RNA processing 7 homolog A
mm39_v1_chr1_-_156248442_156248492	2.35615	Rfx3_Rfx1_Rfx4	ENSMUST00000179985.8|Axdnd1|ENSMUSG00000026601.15|axonemal dynein light chain domain containing 1	ENSMUST00000179744.2|Axdnd1|ENSMUSG00000026601.15|axonemal dynein light chain domain containing 1
mm39_v1_chr9_+_108566513_108566552	2.34276	Rfx3_Rfx1_Rfx4	ENSMUST00000192344.2|Prkar2a|ENSMUSG00000032601.14|protein kinase, cAMP dependent regulatory, type II alpha
mm39_v1_chr4_-_56802266_56802332	2.3424	Rfx3_Rfx1_Rfx4	ENSMUST00000030140.3|Elp1|ENSMUSG00000028431.12|elongator complex protein 1
mm39_v1_chr8_-_107064615_107064640	2.33812	Rfx3_Rfx1_Rfx4	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr1_+_90531183_90531250	2.31503	Rfx3_Rfx1_Rfx4	ENSMUST00000186750.2|Cops8|ENSMUSG00000034432.12|COP9 signalosome subunit 8
mm39_v1_chr15_+_98468885_98468908	2.31421	Rfx3_Rfx1_Rfx4	ENSMUST00000023728.8|Tex49|ENSMUSG00000022993.8|testis expressed 49
mm39_v1_chr14_-_70449438_70449498	2.27821	Rfx3_Rfx1_Rfx4	ENSMUST00000227929.2|Sorbs3|ENSMUSG00000022091.7|sorbin and SH3 domain containing 3
mm39_v1_chr17_-_37262495_37262633	2.25861	Rfx3_Rfx1_Rfx4	ENSMUST00000040402.14|Ppp1r11|ENSMUSG00000036398.14|protein phosphatase 1, regulatory inhibitor subunit 11	ENSMUST00000174711.8|Ppp1r11|ENSMUSG00000036398.14|protein phosphatase 1, regulatory inhibitor subunit 11
mm39_v1_chr3_-_116301720_116301857	2.23169	Rfx3_Rfx1_Rfx4	ENSMUST00000000348.15|Rtca|ENSMUSG00000000339.15|RNA 3'-terminal phosphate cyclase
mm39_v1_chrX_+_73784533_73784533	2.2305	Rfx3_Rfx1_Rfx4	ENSMUST00000114117.2|Ctag2l2|ENSMUSG00000079532.2|CTAG2 like 2
mm39_v1_chr11_-_90528888_90528926	2.22241	Rfx3_Rfx1_Rfx4	ENSMUST00000020858.14|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107875.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107872.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000143203.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4
mm39_v1_chr13_-_49462694_49462735	2.21935	Rfx3_Rfx1_Rfx4	ENSMUST00000110087.9|Fgd3|ENSMUSG00000037946.12|FYVE, RhoGEF and PH domain containing 3
mm39_v1_chr14_+_30673334_30673373	2.21684	Rfx3_Rfx1_Rfx4	ENSMUST00000226551.2|Nek4|ENSMUSG00000021918.11|NIMA (never in mitosis gene a)-related expressed kinase 4	ENSMUST00000228328.2|Nek4|ENSMUSG00000021918.11|NIMA (never in mitosis gene a)-related expressed kinase 4
mm39_v1_chr12_-_110855521_110855581	2.21359	Rfx3_Rfx1_Rfx4	ENSMUST00000220607.2|Cinp|ENSMUSG00000021276.11|cyclin-dependent kinase 2 interacting protein	ENSMUST00000221182.2|Cinp|ENSMUSG00000021276.11|cyclin-dependent kinase 2 interacting protein	ENSMUST00000222457.2|Cinp|ENSMUSG00000021276.11|cyclin-dependent kinase 2 interacting protein	ENSMUST00000221102.2|Cinp|ENSMUSG00000021276.11|cyclin-dependent kinase 2 interacting protein	ENSMUST00000043716.9|Cinp|ENSMUSG00000021276.11|cyclin-dependent kinase 2 interacting protein
mm39_v1_chr3_-_116301684_116301719	2.18176	Rfx3_Rfx1_Rfx4	ENSMUST00000153005.2|Rtca|ENSMUSG00000000339.15|RNA 3'-terminal phosphate cyclase
mm39_v1_chr15_-_78058214_78058314	2.13635	Rfx3_Rfx1_Rfx4	ENSMUST00000016781.8|Ift27|ENSMUSG00000016637.8|intraflagellar transport 27
mm39_v1_chr9_+_119274009_119274048	2.09685	Rfx3_Rfx1_Rfx4	ENSMUST00000035094.14|Exog|ENSMUSG00000042787.16|endo/exonuclease (5'-3'), endonuclease G-like
mm39_v1_chr7_+_27878894_27878960	2.06858	Rfx3_Rfx1_Rfx4	ENSMUST00000085901.13|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	ENSMUST00000172761.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr9_-_50920236_50920380	2.05462	Rfx3_Rfx1_Rfx4	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr14_-_99337137_99337221	2.04565	Rfx3_Rfx1_Rfx4	ENSMUST00000042471.11|Dis3|ENSMUSG00000033166.12|DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
mm39_v1_chr17_-_34337446_34337475	2.03055	Rfx3_Rfx1_Rfx4	ENSMUST00000095347.13|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr19_-_45548942_45548976	2.02506	Rfx3_Rfx1_Rfx4	ENSMUST00000026239.7|Poll|ENSMUSG00000025218.7|polymerase (DNA directed), lambda
mm39_v1_chr2_+_109848151_109848218	1.99266	Rfx3_Rfx1_Rfx4	ENSMUST00000028580.12|Ccdc34|ENSMUSG00000027160.17|coiled-coil domain containing 34
mm39_v1_chr9_+_108356935_108357115	1.99024	Rfx3_Rfx1_Rfx4	ENSMUST00000194147.2|Lamb2|ENSMUSG00000052911.10|laminin, beta 2	ENSMUST00000065014.10|Lamb2|ENSMUSG00000052911.10|laminin, beta 2	ENSMUST00000195483.6|Lamb2|ENSMUSG00000052911.10|laminin, beta 2	ENSMUST00000195058.2|Lamb2|ENSMUSG00000052911.10|laminin, beta 2
mm39_v1_chr5_+_118165808_118165869	1.98891	Rfx3_Rfx1_Rfx4	ENSMUST00000031304.14|Tesc|ENSMUSG00000029359.14|tescalcin
mm39_v1_chr17_-_24217068_24217083	1.97831	Rfx3_Rfx1_Rfx4	ENSMUST00000041649.8|Prss22|ENSMUSG00000045027.8|protease, serine 22
mm39_v1_chr9_+_107879700_107879879	1.97691	Rfx3_Rfx1_Rfx4	ENSMUST00000035214.11|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000176854.7|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000175874.2|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1
mm39_v1_chr6_+_48372771_48372807	1.97658	Rfx3_Rfx1_Rfx4	ENSMUST00000114572.9|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr10_-_62561865_62561907	1.96925	Rfx3_Rfx1_Rfx4	ENSMUST00000133371.8|Stox1|ENSMUSG00000036923.13|storkhead box 1
mm39_v1_chr9_+_105272507_105272614	1.94125	Rfx3_Rfx1_Rfx4	ENSMUST00000035181.10|Aste1|ENSMUSG00000032567.17|asteroid homolog 1	ENSMUST00000123807.8|Aste1|ENSMUSG00000032567.17|asteroid homolog 1
mm39_v1_chr15_-_98093423_98093423	1.93661	Rfx3_Rfx1_Rfx4	ENSMUST00000165379.8|Olfr288|ENSMUSG00000075427.16|olfactory receptor 288
mm39_v1_chr17_+_6697511_6697604	1.92347	Rfx3_Rfx1_Rfx4	ENSMUST00000179569.3|Dynlt1b|ENSMUSG00000096255.3|dynein light chain Tctex-type 1B
mm39_v1_chrX_-_20816841_20816852	1.91451	Rfx3_Rfx1_Rfx4	ENSMUST00000009550.14|Elk1|ENSMUSG00000009406.14|ELK1, member of ETS oncogene family
mm39_v1_chrX_+_153264998_153264998	1.90788	Rfx3_Rfx1_Rfx4	ENSMUST00000026029.2|Samt4|ENSMUSG00000025051.2|spermatogenesis associated multipass transmembrane protein 4
mm39_v1_chr9_+_107440445_107440479	1.89576	Rfx3_Rfx1_Rfx4	ENSMUST00000010198.5|Tusc2|ENSMUSG00000010054.5|tumor suppressor 2, mitochondrial calcium regulator
mm39_v1_chr11_-_69439934_69439934	1.8876	Rfx3_Rfx1_Rfx4	ENSMUST00000108659.2|Dnah2|ENSMUSG00000005237.15|dynein, axonemal, heavy chain 2
mm39_v1_chr3_-_32546380_32546380	1.88522	Rfx3_Rfx1_Rfx4	ENSMUST00000164954.3|Kcnmb3|ENSMUSG00000091091.3|potassium large conductance calcium-activated channel, subfamily M, beta member 3
mm39_v1_chr15_+_77483458_77483458	1.88053	Rfx3_Rfx1_Rfx4	ENSMUST00000230670.2|Gm36245|ENSMUSG00000116079.2|predicted gene, 36245
mm39_v1_chr5_-_24235646_24235705	1.8453	Rfx3_Rfx1_Rfx4	ENSMUST00000197617.5|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A	ENSMUST00000030849.13|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A
mm39_v1_chr16_+_17437367_17437381	1.84452	Rfx3_Rfx1_Rfx4	ENSMUST00000231887.2|Smpd4|ENSMUSG00000005899.15|sphingomyelin phosphodiesterase 4
mm39_v1_chr14_+_55170152_55170152	1.83875	Rfx3_Rfx1_Rfx4	ENSMUST00000037863.6|Il25|ENSMUSG00000040770.6|interleukin 25
mm39_v1_chr2_+_121188195_121188388	1.83373	Rfx3_Rfx1_Rfx4	ENSMUST00000125812.8|Ckmt1|ENSMUSG00000000308.15|creatine kinase, mitochondrial 1, ubiquitous	ENSMUST00000078222.9|Ckmt1|ENSMUSG00000000308.15|creatine kinase, mitochondrial 1, ubiquitous	ENSMUST00000125221.3|Ckmt1|ENSMUSG00000000308.15|creatine kinase, mitochondrial 1, ubiquitous	ENSMUST00000150271.8|Ckmt1|ENSMUSG00000000308.15|creatine kinase, mitochondrial 1, ubiquitous
mm39_v1_chr1_-_92830604_92830643	1.83212	Rfx3_Rfx1_Rfx4	ENSMUST00000160548.8|Ankmy1|ENSMUSG00000034212.15|ankyrin repeat and MYND domain containing 1	ENSMUST00000112998.2|Ankmy1|ENSMUSG00000034212.15|ankyrin repeat and MYND domain containing 1
mm39_v1_chr5_-_121665249_121665321	1.81862	Rfx3_Rfx1_Rfx4	ENSMUST00000152270.8|Mapkapk5|ENSMUSG00000029454.16|MAP kinase-activated protein kinase 5
mm39_v1_chr11_-_101315345_101315622	1.77012	Rfx3_Rfx1_Rfx4	ENSMUST00000107257.8|Gm27029|ENSMUSG00000097239.8|predicted gene, 27029	ENSMUST00000107252.9|Ptges3l|ENSMUSG00000097487.8|prostaglandin E synthase 3 like	ENSMUST00000093933.11|Ptges3l|ENSMUSG00000097487.8|prostaglandin E synthase 3 like	ENSMUST00000107259.4|Gm27029|ENSMUSG00000097239.8|predicted gene, 27029
mm39_v1_chr2_+_3337194_3337211	1.76199	Rfx3_Rfx1_Rfx4	ENSMUST00000115089.2|Acbd7|ENSMUSG00000026644.8|acyl-Coenzyme A binding domain containing 7	ENSMUST00000228935.2|Acbd7|ENSMUSG00000026644.8|acyl-Coenzyme A binding domain containing 7
mm39_v1_chr15_-_75713754_75713781	1.75563	Rfx3_Rfx1_Rfx4	ENSMUST00000100538.4|Zc3h3|ENSMUSG00000075600.4|zinc finger CCCH type containing 3
mm39_v1_chr16_-_64591509_64591546	1.75368	Rfx3_Rfx1_Rfx4	ENSMUST00000076991.7|4930453N24Rik|ENSMUSG00000059920.10|RIKEN cDNA 4930453N24 gene
mm39_v1_chr7_-_126408280_126408405	1.73228	Rfx3_Rfx1_Rfx4	ENSMUST00000207534.3|Aldoa|ENSMUSG00000114515.3|aldolase A, fructose-bisphosphate
mm39_v1_chr7_+_25380195_25380258	1.72954	Rfx3_Rfx1_Rfx4	ENSMUST00000205658.2|B9d2|ENSMUSG00000063439.8|B9 protein domain 2
mm39_v1_chr12_+_85793313_85793347	1.72517	Rfx3_Rfx1_Rfx4	ENSMUST00000040461.4|Flvcr2|ENSMUSG00000034258.5|feline leukemia virus subgroup C cellular receptor 2
mm39_v1_chr7_-_45527802_45527802	1.71884	Rfx3_Rfx1_Rfx4	ENSMUST00000211250.2|Grin2d|ENSMUSG00000002771.13|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm39_v1_chr7_-_118454836_118454918	1.67655	Rfx3_Rfx1_Rfx4	ENSMUST00000106549.9|Knop1|ENSMUSG00000030980.18|lysine rich nucleolar protein 1	ENSMUST00000152309.3|Knop1|ENSMUSG00000030980.18|lysine rich nucleolar protein 1	ENSMUST00000033277.9|Knop1|ENSMUSG00000030980.18|lysine rich nucleolar protein 1
mm39_v1_chr11_+_72580823_72580841	1.64312	Rfx3_Rfx1_Rfx4	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr4_+_118477994_118478105	1.64043	Rfx3_Rfx1_Rfx4	ENSMUST00000030501.15|Ebna1bp2|ENSMUSG00000028729.16|EBNA1 binding protein 2
mm39_v1_chr13_+_108295257_108295288	1.63053	Rfx3_Rfx1_Rfx4	ENSMUST00000120672.8|Ercc8|ENSMUSG00000021694.19|excision repaiross-complementing rodent repair deficiency, complementation group 8	ENSMUST00000054835.15|Ercc8|ENSMUSG00000021694.19|excision repaiross-complementing rodent repair deficiency, complementation group 8
mm39_v1_chr8_+_123338357_123338403	1.62271	Rfx3_Rfx1_Rfx4	ENSMUST00000015157.10|Trappc2l|ENSMUSG00000015013.10|trafficking protein particle complex 2-like
mm39_v1_chr10_-_89457115_89457138	1.61175	Rfx3_Rfx1_Rfx4	ENSMUST00000020102.14|Slc17a8|ENSMUSG00000019935.17|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
mm39_v1_chr1_-_164135008_164135076	1.58092	Rfx3_Rfx1_Rfx4	ENSMUST00000027866.11|Blzf1|ENSMUSG00000026577.14|basic leucine zipper nuclear factor 1	ENSMUST00000120447.8|Blzf1|ENSMUSG00000026577.14|basic leucine zipper nuclear factor 1	ENSMUST00000086032.4|Blzf1|ENSMUSG00000026577.14|basic leucine zipper nuclear factor 1
mm39_v1_chr14_+_30673435_30673469	1.57656	Rfx3_Rfx1_Rfx4	ENSMUST00000226833.2|Nek4|ENSMUSG00000021918.11|NIMA (never in mitosis gene a)-related expressed kinase 4
mm39_v1_chr19_-_3332955_3333051	1.576	Rfx3_Rfx1_Rfx4	ENSMUST00000119292.8|Ighmbp2|ENSMUSG00000024831.15|immunoglobulin mu binding protein 2	ENSMUST00000025751.11|Ighmbp2|ENSMUSG00000024831.15|immunoglobulin mu binding protein 2
mm39_v1_chr7_+_12712139_12712165	1.57321	Rfx3_Rfx1_Rfx4	ENSMUST00000108536.3|Zfp446|ENSMUSG00000033961.17|zinc finger protein 446
mm39_v1_chr3_+_156267772_156267829	1.56776	Rfx3_Rfx1_Rfx4	ENSMUST00000175773.2|Negr1|ENSMUSG00000040037.14|neuronal growth regulator 1
mm39_v1_chr14_+_30673409_30673426	1.56559	Rfx3_Rfx1_Rfx4	ENSMUST00000050171.10|Nek4|ENSMUSG00000021918.11|NIMA (never in mitosis gene a)-related expressed kinase 4
mm39_v1_chr10_-_75600100_75600191	1.56486	Rfx3_Rfx1_Rfx4	ENSMUST00000218469.2|Cabin1|ENSMUSG00000020196.11|calcineurin binding protein 1	ENSMUST00000001712.8|Cabin1|ENSMUSG00000020196.11|calcineurin binding protein 1
mm39_v1_chrX_-_135642025_135642101	1.52544	Rfx3_Rfx1_Rfx4	ENSMUST00000155207.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2	ENSMUST00000080411.13|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2	ENSMUST00000169418.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2
mm39_v1_chr8_-_35432783_35432869	1.5123	Rfx3_Rfx1_Rfx4	ENSMUST00000033929.6|Tnks|ENSMUSG00000031529.6|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm39_v1_chr5_+_24791719_24791792	1.49941	Rfx3_Rfx1_Rfx4	ENSMUST00000088295.9|Chpf2|ENSMUSG00000038181.17|chondroitin polymerizing factor 2	ENSMUST00000121863.5|Chpf2|ENSMUSG00000038181.17|chondroitin polymerizing factor 2
mm39_v1_chr5_-_24235295_24235317	1.47428	Rfx3_Rfx1_Rfx4	ENSMUST00000101513.9|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A
mm39_v1_chr11_-_76359222_76359313	1.47401	Rfx3_Rfx1_Rfx4	ENSMUST00000065028.14|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr6_+_48372586_48372623	1.43335	Rfx3_Rfx1_Rfx4	ENSMUST00000077093.7|Krba1|ENSMUSG00000042810.15|KRAB-A domain containing 1
mm39_v1_chr16_-_90607251_90607318	1.40441	Rfx3_Rfx1_Rfx4	ENSMUST00000140920.2|Urb1|ENSMUSG00000039929.15|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm39_v1_chr13_+_49658249_49658292	1.37172	Rfx3_Rfx1_Rfx4	ENSMUST00000051504.8|Ecm2|ENSMUSG00000043631.9|extracellular matrix protein 2, female organ and adipocyte specific
mm39_v1_chr14_-_40728839_40728933	1.36746	Rfx3_Rfx1_Rfx4	ENSMUST00000152837.2|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A	ENSMUST00000134715.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr15_-_97991114_97991141	1.34435	Rfx3_Rfx1_Rfx4	ENSMUST00000180657.2|Senp1|ENSMUSG00000033075.18|SUMO1/sentrin specific peptidase 1
mm39_v1_chr6_-_100648086_100648140	1.32795	Rfx3_Rfx1_Rfx4	ENSMUST00000089245.7|Shq1|ENSMUSG00000035378.18|SHQ1 homolog (S. cerevisiae)	ENSMUST00000113312.9|Shq1|ENSMUSG00000035378.18|SHQ1 homolog (S. cerevisiae)	ENSMUST00000170667.8|Shq1|ENSMUSG00000035378.18|SHQ1 homolog (S. cerevisiae)
mm39_v1_chr9_-_40915858_40915882	1.32088	Rfx3_Rfx1_Rfx4	ENSMUST00000188848.8|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule	ENSMUST00000034519.13|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule
mm39_v1_chr4_+_124696336_124696381	1.31689	Rfx3_Rfx1_Rfx4	ENSMUST00000138807.8|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1	ENSMUST00000030723.3|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1
mm39_v1_chr6_+_125073108_125073125	1.30966	Rfx3_Rfx1_Rfx4	ENSMUST00000112390.8|Chd4|ENSMUSG00000063870.13|chromodomain helicase DNA binding protein 4
mm39_v1_chr9_+_107440484_107440569	1.27372	Rfx3_Rfx1_Rfx4	ENSMUST00000193418.2|Tusc2|ENSMUSG00000010054.5|tumor suppressor 2, mitochondrial calcium regulator
mm39_v1_chr14_+_61022006_61022124	1.2662	Rfx3_Rfx1_Rfx4	ENSMUST00000063562.9|Mipep|ENSMUSG00000021993.11|mitochondrial intermediate peptidase	ENSMUST00000225043.2|Mipep|ENSMUSG00000021993.11|mitochondrial intermediate peptidase
mm39_v1_chr18_-_61310066_61310129	1.26078	Rfx3_Rfx1_Rfx4	ENSMUST00000235480.2|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3	ENSMUST00000091884.6|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3
mm39_v1_chr6_+_137712076_137712150	1.26058	Rfx3_Rfx1_Rfx4	ENSMUST00000064910.7|Strap|ENSMUSG00000030224.11|serine/threonine kinase receptor associated protein
mm39_v1_chrX_-_72380446_72380446	1.17782	Rfx3_Rfx1_Rfx4	ENSMUST00000207943.2|Gm45015|ENSMUSG00000109368.2|predicted gene 45015
mm39_v1_chr17_+_28361115_28361167	1.15062	Rfx3_Rfx1_Rfx4	ENSMUST00000043503.11|Scube3|ENSMUSG00000038677.15|signal peptide, CUB domain, EGF-like 3
mm39_v1_chr13_-_108295018_108295164	1.13476	Rfx3_Rfx1_Rfx4	ENSMUST00000225830.2|Ndufaf2|ENSMUSG00000068184.8|NADH:ubiquinone oxidoreductase complex assembly factor 2	ENSMUST00000223734.2|Ndufaf2|ENSMUSG00000068184.8|NADH:ubiquinone oxidoreductase complex assembly factor 2	ENSMUST00000163558.3|Ndufaf2|ENSMUSG00000068184.8|NADH:ubiquinone oxidoreductase complex assembly factor 2
mm39_v1_chr19_-_10533562_10533640	1.13424	Rfx3_Rfx1_Rfx4	ENSMUST00000025569.9|Tmem216|ENSMUSG00000024667.13|transmembrane protein 216
mm39_v1_chr16_-_91525863_91525980	1.11631	Rfx3_Rfx1_Rfx4	ENSMUST00000073466.13|Cryzl1|ENSMUSG00000058240.15|crystallin, zeta (quinone reductase)-like 1
mm39_v1_chr5_+_124250360_124250420	1.09321	Rfx3_Rfx1_Rfx4	ENSMUST00000024470.13|Ogfod2|ENSMUSG00000023707.14|2-oxoglutarate and iron-dependent oxygenase domain containing 2	ENSMUST00000119269.6|Ogfod2|ENSMUSG00000023707.14|2-oxoglutarate and iron-dependent oxygenase domain containing 2	ENSMUST00000196627.5|Ogfod2|ENSMUSG00000023707.14|2-oxoglutarate and iron-dependent oxygenase domain containing 2	ENSMUST00000199457.5|Ogfod2|ENSMUSG00000023707.14|2-oxoglutarate and iron-dependent oxygenase domain containing 2	ENSMUST00000198505.2|Ogfod2|ENSMUSG00000023707.14|2-oxoglutarate and iron-dependent oxygenase domain containing 2
mm39_v1_chr16_+_13572409_13572500	1.0804	Rfx3_Rfx1_Rfx4	ENSMUST00000239037.2|A930007A09Rik|ENSMUSG00000118559.3|RIKEN cDNA A930007A09 gene
mm39_v1_chr12_-_110662723_110662753	1.05244	Rfx3_Rfx1_Rfx4	ENSMUST00000021698.13|Hsp90aa1|ENSMUSG00000021270.14|heat shock protein 90, alpha (cytosolic), class A member 1
mm39_v1_chr5_+_4073343_4073415	1.05206	Rfx3_Rfx1_Rfx4	ENSMUST00000238634.2|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr19_-_10533088_10533125	1.04527	Rfx3_Rfx1_Rfx4	ENSMUST00000059582.9|Tmem216|ENSMUSG00000024667.13|transmembrane protein 216	ENSMUST00000154383.2|Tmem216|ENSMUSG00000024667.13|transmembrane protein 216
mm39_v1_chr1_+_24717711_24717718	1.0409	Rfx3_Rfx1_Rfx4	ENSMUST00000191471.7|Lmbrd1|ENSMUSG00000073725.9|LMBR1 domain containing 1
mm39_v1_chr13_+_22129246_22129316	1.01519	Rfx3_Rfx1_Rfx4	ENSMUST00000176511.8|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)	ENSMUST00000102978.8|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)	ENSMUST00000152258.9|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)
mm39_v1_chr7_-_42962487_42962540	1.00278	Rfx3_Rfx1_Rfx4	ENSMUST00000135130.2|Zfp715|ENSMUSG00000012640.17|zinc finger protein 715	ENSMUST00000139061.2|Zfp715|ENSMUSG00000012640.17|zinc finger protein 715
mm39_v1_chr7_-_42962640_42962717	1.00212	Rfx3_Rfx1_Rfx4	ENSMUST00000012796.14|Zfp715|ENSMUSG00000012640.17|zinc finger protein 715	ENSMUST00000107986.9|Zfp715|ENSMUSG00000012640.17|zinc finger protein 715
mm39_v1_chr13_-_30170031_30170048	0.995527	Rfx3_Rfx1_Rfx4	ENSMUST00000102948.11|E2f3|ENSMUSG00000016477.19|E2F transcription factor 3
mm39_v1_chr8_+_67943410_67943410	0.987338	Rfx3_Rfx1_Rfx4	ENSMUST00000026677.4|Nat1|ENSMUSG00000025588.5|N-acetyl transferase 1
mm39_v1_chr14_-_31807552_31807686	0.957291	Rfx3_Rfx1_Rfx4	ENSMUST00000022461.11|Dph3|ENSMUSG00000021905.15|diphthamine biosynthesis 3	ENSMUST00000067955.12|Dph3|ENSMUSG00000021905.15|diphthamine biosynthesis 3	ENSMUST00000124303.9|Dph3|ENSMUSG00000021905.15|diphthamine biosynthesis 3
mm39_v1_chr12_-_83609217_83609241	0.941969	Rfx3_Rfx1_Rfx4	ENSMUST00000222448.2|Zfyve1|ENSMUSG00000042628.9|zinc finger, FYVE domain containing 1
mm39_v1_chrX_-_48877080_48877120	0.936727	Rfx3_Rfx1_Rfx4	ENSMUST00000114893.8|Igsf1|ENSMUSG00000031111.17|immunoglobulin superfamily, member 1
mm39_v1_chrX_-_47683250_47683334	0.930475	Rfx3_Rfx1_Rfx4	ENSMUST00000088898.11|Zfp280c|ENSMUSG00000036916.14|zinc finger protein 280C	ENSMUST00000072292.12|Zfp280c|ENSMUSG00000036916.14|zinc finger protein 280C
mm39_v1_chr15_+_59186876_59186977	0.921954	Rfx3_Rfx1_Rfx4	ENSMUST00000022977.14|Sqle|ENSMUSG00000022351.15|squalene epoxidase	ENSMUST00000100640.5|Sqle|ENSMUSG00000022351.15|squalene epoxidase
mm39_v1_chr11_+_78427181_78427194	0.89619	Rfx3_Rfx1_Rfx4	ENSMUST00000128788.8|Ift20|ENSMUSG00000001105.16|intraflagellar transport 20
mm39_v1_chr5_+_124802149_124802201	0.884726	Rfx3_Rfx1_Rfx4	ENSMUST00000141137.7|Dnah10|ENSMUSG00000038011.16|dynein, axonemal, heavy chain 10	ENSMUST00000058440.12|Dnah10|ENSMUSG00000038011.16|dynein, axonemal, heavy chain 10
mm39_v1_chrX_-_101114794_101114808	0.87735	Rfx3_Rfx1_Rfx4	ENSMUST00000113631.2|Rtl5|ENSMUSG00000049191.13|retrotransposon Gag like 5
mm39_v1_chr2_-_166902307_166902359	0.87604	Rfx3_Rfx1_Rfx4	ENSMUST00000155281.8|Znfx1|ENSMUSG00000039501.15|zinc finger, NFX1-type containing 1
mm39_v1_chr5_+_21629932_21630031	0.852623	Rfx3_Rfx1_Rfx4	ENSMUST00000056045.5|Fam185a|ENSMUSG00000047221.6|family with sequence similarity 185, member A
mm39_v1_chr13_-_59894566_59894566	0.840091	Rfx3_Rfx1_Rfx4	ENSMUST00000178508.2|1700014D04Rik|ENSMUSG00000051054.5|RIKEN cDNA 1700014D04 gene
mm39_v1_chr1_-_84817976_84818060	0.83305	Rfx3_Rfx1_Rfx4	ENSMUST00000190067.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr16_-_4782031_4782085	0.817166	Rfx3_Rfx1_Rfx4	ENSMUST00000023157.6|Anks3|ENSMUSG00000022515.7|ankyrin repeat and sterile alpha motif domain containing 3	ENSMUST00000229765.2|Anks3|ENSMUSG00000022515.7|ankyrin repeat and sterile alpha motif domain containing 3
mm39_v1_chr7_+_25380263_25380286	0.802701	Rfx3_Rfx1_Rfx4	ENSMUST00000205325.2|B9d2|ENSMUSG00000063439.8|B9 protein domain 2	ENSMUST00000206913.2|B9d2|ENSMUSG00000063439.8|B9 protein domain 2
mm39_v1_chr4_-_133273243_133273320	0.802062	Rfx3_Rfx1_Rfx4	ENSMUST00000030665.7|Nudc|ENSMUSG00000028851.7|nudC nuclear distribution protein
mm39_v1_chr9_-_40915895_40915929	0.797979	Rfx3_Rfx1_Rfx4	ENSMUST00000180384.3|Crtam|ENSMUSG00000032021.15|cytotoxic and regulatory T cell molecule
mm39_v1_chr12_+_11316101_11316179	0.783029	Rfx3_Rfx1_Rfx4	ENSMUST00000218866.2|Smc6|ENSMUSG00000020608.8|structural maintenance of chromosomes 6
mm39_v1_chr11_-_69304501_69304501	0.767924	Rfx3_Rfx1_Rfx4	ENSMUST00000094077.5|Kdm6b|ENSMUSG00000018476.8|KDM1 lysine (K)-specific demethylase 6B
mm39_v1_chrX_-_135641869_135641904	0.761514	Rfx3_Rfx1_Rfx4	ENSMUST00000166930.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2	ENSMUST00000113095.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2
mm39_v1_chr11_-_107228382_107228463	0.757799	Rfx3_Rfx1_Rfx4	ENSMUST00000040380.13|Pitpnc1|ENSMUSG00000040430.19|phosphatidylinositol transfer protein, cytoplasmic 1
mm39_v1_chr15_-_75550581_75550661	0.753068	Rfx3_Rfx1_Rfx4	ENSMUST00000000958.9|Top1mt|ENSMUSG00000000934.10|DNA topoisomerase 1, mitochondrial
mm39_v1_chr9_+_99457829_99457882	0.750073	Rfx3_Rfx1_Rfx4	ENSMUST00000066650.12|Dbr1|ENSMUSG00000032469.13|debranching RNA lariats 1	ENSMUST00000148987.8|Dbr1|ENSMUSG00000032469.13|debranching RNA lariats 1
mm39_v1_chr7_+_29931309_29931457	0.748296	Rfx3_Rfx1_Rfx4	ENSMUST00000019882.16|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I	ENSMUST00000149654.8|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I
mm39_v1_chr8_-_55340024_55340185	0.733705	Rfx3_Rfx1_Rfx4	ENSMUST00000176866.8|Wdr17|ENSMUSG00000039375.17|WD repeat domain 17
mm39_v1_chr1_-_152642032_152642069	0.732489	Rfx3_Rfx1_Rfx4	ENSMUST00000111859.8|Rgl1|ENSMUSG00000026482.14|ral guanine nucleotide dissociation stimulator,-like 1
mm39_v1_chr6_+_48425034_48425163	0.717013	Rfx3_Rfx1_Rfx4	ENSMUST00000212740.2|Sspo|ENSMUSG00000029797.14|SCO-spondin	ENSMUST00000169350.9|Sspo|ENSMUSG00000029797.14|SCO-spondin	ENSMUST00000043676.12|Sspo|ENSMUSG00000029797.14|SCO-spondin
mm39_v1_chr18_-_39652468_39652478	0.708163	Rfx3_Rfx1_Rfx4	ENSMUST00000237944.2|Nr3c1|ENSMUSG00000024431.16|nuclear receptor subfamily 3, group C, member 1
mm39_v1_chr14_+_70793340_70793340	0.706268	Rfx3_Rfx1_Rfx4	ENSMUST00000163060.2|Hr|ENSMUSG00000022096.15|lysine demethylase and nuclear receptor corepressor
mm39_v1_chr7_+_29931735_29931773	0.686449	Rfx3_Rfx1_Rfx4	ENSMUST00000108193.2|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I	ENSMUST00000108192.2|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I
mm39_v1_chr12_-_110662765_110662852	0.682213	Rfx3_Rfx1_Rfx4	ENSMUST00000094361.11|Hsp90aa1|ENSMUSG00000021270.14|heat shock protein 90, alpha (cytosolic), class A member 1
mm39_v1_chr9_+_108660989_108661064	0.6645	Rfx3_Rfx1_Rfx4	ENSMUST00000192307.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2	ENSMUST00000193560.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2	ENSMUST00000194875.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2
mm39_v1_chr4_+_123798690_123798709	0.647381	Rfx3_Rfx1_Rfx4	ENSMUST00000106202.4|Mycbp|ENSMUSG00000028647.14|MYC binding protein
mm39_v1_chr3_-_89121147_89121230	0.63477	Rfx3_Rfx1_Rfx4	ENSMUST00000173477.8|Mtx1|ENSMUSG00000064068.16|metaxin 1	ENSMUST00000119222.9|Mtx1|ENSMUSG00000064068.16|metaxin 1
mm39_v1_chr6_+_125072944_125072999	0.63333	Rfx3_Rfx1_Rfx4	ENSMUST00000112392.8|Chd4|ENSMUSG00000063870.13|chromodomain helicase DNA binding protein 4	ENSMUST00000056889.15|Chd4|ENSMUSG00000063870.13|chromodomain helicase DNA binding protein 4
mm39_v1_chr8_+_34222266_34222367	0.617646	Rfx3_Rfx1_Rfx4	ENSMUST00000190675.2|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)	ENSMUST00000171010.8|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)
mm39_v1_chrX_+_152142571_152142609	0.617139	Rfx3_Rfx1_Rfx4	ENSMUST00000039545.5|Klf8|ENSMUSG00000041649.14|Kruppel-like factor 8
mm39_v1_chr15_-_36794741_36794791	0.586477	Rfx3_Rfx1_Rfx4	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr5_-_123887434_123887483	0.57433	Rfx3_Rfx1_Rfx4	ENSMUST00000182955.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000182489.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000183147.9|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000050827.14|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000057795.12|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000111515.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2	ENSMUST00000182309.8|Rsrc2|ENSMUSG00000029422.16|arginine/serine-rich coiled-coil 2
mm39_v1_chr3_+_40594899_40594939	0.567967	Rfx3_Rfx1_Rfx4	ENSMUST00000091186.7|Intu|ENSMUSG00000060798.8|inturned planar cell polarity protein
mm39_v1_chr13_+_43769426_43769469	0.548622	Rfx3_Rfx1_Rfx4	ENSMUST00000161817.2|Rnf182|ENSMUSG00000044164.3|ring finger protein 182
mm39_v1_chr17_+_43700327_43700390	0.531118	Rfx3_Rfx1_Rfx4	ENSMUST00000113599.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5	ENSMUST00000224278.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5	ENSMUST00000225466.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr7_-_12418918_12418930	0.524899	Rfx3_Rfx1_Rfx4	ENSMUST00000167771.2|Vmn2r55|ENSMUSG00000091045.10|vomeronasal 2, receptor 55	ENSMUST00000172743.9|Vmn2r55|ENSMUSG00000091045.10|vomeronasal 2, receptor 55	ENSMUST00000233763.2|Vmn2r55|ENSMUSG00000091045.10|vomeronasal 2, receptor 55	ENSMUST00000232880.2|Vmn2r55|ENSMUSG00000091045.10|vomeronasal 2, receptor 55
mm39_v1_chr11_-_4799345_4799536	0.497484	Rfx3_Rfx1_Rfx4	ENSMUST00000053079.13|Nf2|ENSMUSG00000009073.17|neurofibromin 2	ENSMUST00000109910.9|Nf2|ENSMUSG00000009073.17|neurofibromin 2
mm39_v1_chr8_-_121835037_121835098	0.489584	Rfx3_Rfx1_Rfx4	ENSMUST00000126431.2|Mthfsd|ENSMUSG00000031816.16|methenyltetrahydrofolate synthetase domain containing	ENSMUST00000139782.8|Mthfsd|ENSMUSG00000031816.16|methenyltetrahydrofolate synthetase domain containing	ENSMUST00000047282.12|Mthfsd|ENSMUSG00000031816.16|methenyltetrahydrofolate synthetase domain containing	ENSMUST00000116415.9|Mthfsd|ENSMUSG00000031816.16|methenyltetrahydrofolate synthetase domain containing
mm39_v1_chr7_+_27879650_27879692	0.488168	Rfx3_Rfx1_Rfx4	ENSMUST00000172467.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr1_+_181952302_181952383	0.484574	Rfx3_Rfx1_Rfx4	ENSMUST00000111018.2|Srp9|ENSMUSG00000026511.8|signal recognition particle 9	ENSMUST00000027792.6|Srp9|ENSMUSG00000026511.8|signal recognition particle 9
mm39_v1_chr8_-_71308040_71308040	0.472364	Rfx3_Rfx1_Rfx4	ENSMUST00000212509.3|Kcnn1|ENSMUSG00000002908.18|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
mm39_v1_chr12_+_11315868_11315887	0.471292	Rfx3_Rfx1_Rfx4	ENSMUST00000020931.6|Smc6|ENSMUSG00000020608.8|structural maintenance of chromosomes 6
mm39_v1_chr8_+_86026318_86026420	0.470086	Rfx3_Rfx1_Rfx4	ENSMUST00000170141.3|Orc6|ENSMUSG00000031697.13|origin recognition complex, subunit 6	ENSMUST00000034132.13|Orc6|ENSMUSG00000031697.13|origin recognition complex, subunit 6
mm39_v1_chr8_-_86026385_86026431	0.436656	Rfx3_Rfx1_Rfx4	ENSMUST00000034131.10|Vps35|ENSMUSG00000031696.10|VPS35 retromer complex component
mm39_v1_chr11_+_45871135_45871164	0.420446	Rfx3_Rfx1_Rfx4	ENSMUST00000049038.4|Sox30|ENSMUSG00000040489.6|SRY (sex determining region Y)-box 30
mm39_v1_chr1_-_53745920_53745999	0.401699	Rfx3_Rfx1_Rfx4	ENSMUST00000094964.7|Dnah7a|ENSMUSG00000096141.3|dynein, axonemal, heavy chain 7A
mm39_v1_chr4_+_111577382_111577402	0.399703	Rfx3_Rfx1_Rfx4	ENSMUST00000084354.4|Spata6|ENSMUSG00000034401.17|spermatogenesis associated 6
mm39_v1_chr19_-_40371242_40371275	0.375182	Rfx3_Rfx1_Rfx4	ENSMUST00000224583.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1
mm39_v1_chr18_+_48178397_48178415	0.373025	Rfx3_Rfx1_Rfx4	ENSMUST00000076155.6|Eno1b|ENSMUSG00000059040.6|enolase 1B, retrotransposed
mm39_v1_chr2_-_101459274_101459301	0.37095	Rfx3_Rfx1_Rfx4	ENSMUST00000099682.9|Iftap|ENSMUSG00000027165.17|intraflagellar transport associated protein
mm39_v1_chr8_-_121835125_121835145	0.354655	Rfx3_Rfx1_Rfx4	ENSMUST00000133037.8|Mthfsd|ENSMUSG00000031816.16|methenyltetrahydrofolate synthetase domain containing
mm39_v1_chr1_+_64729603_64729625	0.346265	Rfx3_Rfx1_Rfx4	ENSMUST00000114077.8|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr7_+_121666388_121666438	0.297249	Rfx3_Rfx1_Rfx4	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr5_-_137015683_137015755	0.281362	Rfx3_Rfx1_Rfx4	ENSMUST00000034953.14|Znhit1|ENSMUSG00000059518.15|zinc finger, HIT domain containing 1	ENSMUST00000085941.12|Znhit1|ENSMUSG00000059518.15|zinc finger, HIT domain containing 1
mm39_v1_chr12_-_105188993_105189005	0.258138	Rfx3_Rfx1_Rfx4	ENSMUST00000041316.15|Tcl1|ENSMUSG00000041359.15|T cell lymphoma breakpoint 1
mm39_v1_chr11_-_78136767_78136813	0.256567	Rfx3_Rfx1_Rfx4	ENSMUST00000002121.5|Supt6|ENSMUSG00000002052.7|SPT6, histone chaperone and transcription elongation factor
mm39_v1_chr11_-_4798985_4799194	0.226474	Rfx3_Rfx1_Rfx4	ENSMUST00000056290.13|Nf2|ENSMUSG00000009073.17|neurofibromin 2	ENSMUST00000172305.2|Nf2|ENSMUSG00000009073.17|neurofibromin 2	ENSMUST00000164190.8|Nf2|ENSMUSG00000009073.17|neurofibromin 2
mm39_v1_chr3_+_146156220_146156258	0.19791	Rfx3_Rfx1_Rfx4	ENSMUST00000061937.13|Ctbs|ENSMUSG00000028189.13|chitobiase	ENSMUST00000029840.4|Ctbs|ENSMUSG00000028189.13|chitobiase
mm39_v1_chr11_+_46126274_46126358	0.189623	Rfx3_Rfx1_Rfx4	ENSMUST00000060185.3|Fndc9|ENSMUSG00000048721.3|fibronectin type III domain containing 9
mm39_v1_chr11_-_3143387_3143463	0.179329	Rfx3_Rfx1_Rfx4	ENSMUST00000081318.13|Sfi1|ENSMUSG00000023764.19|Sfi1 homolog, spindle assembly associated (yeast)	ENSMUST00000142315.8|Sfi1|ENSMUSG00000023764.19|Sfi1 homolog, spindle assembly associated (yeast)	ENSMUST00000118627.2|Sfi1|ENSMUSG00000023764.19|Sfi1 homolog, spindle assembly associated (yeast)	ENSMUST00000066391.14|Sfi1|ENSMUSG00000023764.19|Sfi1 homolog, spindle assembly associated (yeast)
mm39_v1_chr5_+_35074862_35074890	0.17801	Rfx3_Rfx1_Rfx4	ENSMUST00000202205.2|Msantd1|ENSMUSG00000051246.4|Myb/SANT-like DNA-binding domain containing 1
mm39_v1_chrX_+_7750558_7750617	0.157443	Rfx3_Rfx1_Rfx4	ENSMUST00000208640.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000207114.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000208633.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000208397.2|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000153620.3|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2	ENSMUST00000123277.8|Slc35a2|ENSMUSG00000031156.19|solute carrier family 35 (UDP-galactose transporter), member A2
mm39_v1_chr12_+_111505253_111505308	0.148042	Rfx3_Rfx1_Rfx4	ENSMUST00000220803.2|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5
mm39_v1_chr1_+_151304293_151304470	0.140773	Rfx3_Rfx1_Rfx4	ENSMUST00000065625.12|Trmt1l|ENSMUSG00000053286.12|tRNA methyltransferase 1 like
mm39_v1_chr8_-_106732607_106732607	0.137504	Rfx3_Rfx1_Rfx4	ENSMUST00000227778.2|Dpep2nb|ENSMUSG00000115768.2|Dpep2 neighbor
mm39_v1_chr11_+_102139671_102139715	0.134953	Rfx3_Rfx1_Rfx4	ENSMUST00000100392.5|Hrob|ENSMUSG00000034773.17|homologous recombination factor with OB-fold
mm39_v1_chr12_-_105188965_105188982	0.105888	Rfx3_Rfx1_Rfx4	ENSMUST00000176579.2|Tcl1|ENSMUSG00000041359.15|T cell lymphoma breakpoint 1	ENSMUST00000101071.4|Tcl1|ENSMUSG00000041359.15|T cell lymphoma breakpoint 1
mm39_v1_chr1_-_36982747_36982891	0.081901	Rfx3_Rfx1_Rfx4	ENSMUST00000185964.3|Tmem131|ENSMUSG00000026116.12|transmembrane protein 131
mm39_v1_chr7_+_6175481_6175530	0.049005	Rfx3_Rfx1_Rfx4	ENSMUST00000108567.9|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000207176.2|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000054680.12|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000108566.8|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444
mm39_v1_chr7_+_18883647_18883769	0.0474713	Rfx3_Rfx1_Rfx4	ENSMUST00000049294.4|Snrpd2|ENSMUSG00000040824.4|small nuclear ribonucleoprotein D2
mm39_v1_chr3_+_103875904_103875977	0.0419426	Rfx3_Rfx1_Rfx4	ENSMUST00000156262.8|Phtf1|ENSMUSG00000058388.15|putative homeodomain transcription factor 1
mm39_v1_chr4_+_118478357_118478436	0.0353626	Rfx3_Rfx1_Rfx4	ENSMUST00000147373.2|Ebna1bp2|ENSMUSG00000028729.16|EBNA1 binding protein 2
mm39_v1_chr1_+_24717722_24717756	0.0339516	Rfx3_Rfx1_Rfx4	ENSMUST00000186096.7|Lmbrd1|ENSMUSG00000073725.9|LMBR1 domain containing 1
mm39_v1_chr1_+_75213082_75213113	0.0254929	Rfx3_Rfx1_Rfx4	ENSMUST00000055223.14|Dnajb2|ENSMUSG00000026203.17|DnaJ heat shock protein family (Hsp40) member B2	ENSMUST00000082158.13|Dnajb2|ENSMUSG00000026203.17|DnaJ heat shock protein family (Hsp40) member B2	ENSMUST00000188346.7|Dnajb2|ENSMUSG00000026203.17|DnaJ heat shock protein family (Hsp40) member B2
mm39_v1_chr6_-_128401832_128401897	0.00278221	Rfx3_Rfx1_Rfx4	ENSMUST00000203374.3|Itfg2|ENSMUSG00000001518.13|integrin alpha FG-GAP repeat containing 2	ENSMUST00000142615.4|Itfg2|ENSMUSG00000001518.13|integrin alpha FG-GAP repeat containing 2	ENSMUST00000001559.11|Itfg2|ENSMUSG00000001518.13|integrin alpha FG-GAP repeat containing 2
