mm39_v1_chr17_+_34617784_34617804	27.2176	Rfx5	ENSMUST00000114175.8|BC051142|ENSMUSG00000057246.17|cDNA sequence BC051142	ENSMUST00000139063.8|BC051142|ENSMUSG00000057246.17|cDNA sequence BC051142	ENSMUST00000078615.12|BC051142|ENSMUSG00000057246.17|cDNA sequence BC051142
mm39_v1_chr17_+_34364206_34364245	20.4647	Rfx5	ENSMUST00000041982.9|H2-DMb2|ENSMUSG00000037548.16|histocompatibility 2, class II, locus Mb2	ENSMUST00000171231.8|H2-DMb2|ENSMUSG00000037548.16|histocompatibility 2, class II, locus Mb2
mm39_v1_chr19_+_37364791_37364871	19.6804	Rfx5	ENSMUST00000012587.4|Kif11|ENSMUSG00000012443.5|kinesin family member 11
mm39_v1_chr17_+_34457868_34457938	17.9325	Rfx5	ENSMUST00000095342.11|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000167280.8|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000236838.2|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus
mm39_v1_chr17_+_34482183_34482230	17.4062	Rfx5	ENSMUST00000040828.7|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237342.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237866.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1
mm39_v1_chr18_+_60936910_60936928	17.3847	Rfx5	ENSMUST00000097563.9|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	ENSMUST00000050487.16|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	ENSMUST00000167610.2|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm39_v1_chr17_+_34416707_34416764	17.3522	Rfx5	ENSMUST00000025196.9|Psmb8|ENSMUSG00000024338.16|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
mm39_v1_chr7_+_126690525_126690596	15.4006	Rfx5	ENSMUST00000056288.7|AI467606|ENSMUSG00000045165.7|expressed sequence AI467606	ENSMUST00000206102.2|AI467606|ENSMUSG00000045165.7|expressed sequence AI467606
mm39_v1_chr17_+_34524841_34524883	15.255	Rfx5	ENSMUST00000235530.2|H2-Eb1|ENSMUSG00000060586.12|histocompatibility 2, class II antigen E beta
mm39_v1_chr17_+_34524884_34524991	14.8943	Rfx5	ENSMUST00000074557.11|H2-Eb1|ENSMUSG00000060586.12|histocompatibility 2, class II antigen E beta
mm39_v1_chr17_+_34372046_34372213	14.5995	Rfx5	ENSMUST00000114232.4|H2-DMb1|ENSMUSG00000079547.5|histocompatibility 2, class II, locus Mb1
mm39_v1_chr17_+_34416689_34416702	14.0291	Rfx5	ENSMUST00000173441.9|Psmb8|ENSMUSG00000024338.16|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
mm39_v1_chr17_+_36172210_36172232	13.6353	Rfx5	ENSMUST00000074259.15|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)	ENSMUST00000174873.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr17_+_35658131_35658171	12.3892	Rfx5	ENSMUST00000071951.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000116598.10|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000078205.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000076256.8|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7
mm39_v1_chr17_+_34544632_34544654	11.8359	Rfx5	ENSMUST00000050325.10|H2-Eb2|ENSMUSG00000067341.7|histocompatibility 2, class II antigen E beta2
mm39_v1_chr17_+_34406523_34406544	11.8307	Rfx5	ENSMUST00000170086.8|Tap1|ENSMUSG00000037321.18|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm39_v1_chr17_+_35598583_35598614	11.5702	Rfx5	ENSMUST00000081435.5|H2-Q4|ENSMUSG00000035929.12|histocompatibility 2, Q region locus 4
mm39_v1_chr17_+_34406762_34406843	11.5657	Rfx5	ENSMUST00000041633.15|Tap1|ENSMUSG00000037321.18|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm39_v1_chr17_-_37794434_37794450	11.1448	Rfx5	ENSMUST00000016427.11|H2-M2|ENSMUSG00000016283.14|histocompatibility 2, M region locus 2	ENSMUST00000171139.3|H2-M2|ENSMUSG00000016283.14|histocompatibility 2, M region locus 2
mm39_v1_chr19_-_10460238_10460302	11.0889	Rfx5	ENSMUST00000235392.2|Ppp1r32|ENSMUSG00000035179.5|protein phosphatase 1, regulatory subunit 32	ENSMUST00000237522.2|Ppp1r32|ENSMUSG00000035179.5|protein phosphatase 1, regulatory subunit 32	ENSMUST00000038842.5|Ppp1r32|ENSMUSG00000035179.5|protein phosphatase 1, regulatory subunit 32
mm39_v1_chr17_+_36172235_36172378	10.7717	Rfx5	ENSMUST00000172931.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr7_-_30364394_30364424	10.4042	Rfx5	ENSMUST00000019697.9|Haus5|ENSMUSG00000078762.11|HAUS augmin-like complex, subunit 5
mm39_v1_chr10_-_128579879_128579954	9.86162	Rfx5	ENSMUST00000026414.9|Dgka|ENSMUSG00000025357.9|diacylglycerol kinase, alpha
mm39_v1_chr17_-_34219225_34219321	9.79189	Rfx5	ENSMUST00000238098.2|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region	ENSMUST00000087189.7|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region	ENSMUST00000173075.3|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region	ENSMUST00000172912.8|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region	ENSMUST00000236740.2|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region	ENSMUST00000025181.18|H2-K1|ENSMUSG00000061232.17|histocompatibility 2, K1, K region
mm39_v1_chr17_+_34354556_34354645	9.35508	Rfx5	ENSMUST00000236322.2|H2-DMa|ENSMUSG00000037649.11|histocompatibility 2, class II, locus DMa	ENSMUST00000237402.2|H2-DMa|ENSMUSG00000037649.11|histocompatibility 2, class II, locus DMa
mm39_v1_chr11_+_106167541_106167574	8.8582	Rfx5	ENSMUST00000044462.4|Tcam1|ENSMUSG00000020712.12|testicular cell adhesion molecule 1
mm39_v1_chr17_-_34406193_34406319	8.68708	Rfx5	ENSMUST00000173831.3|Psmb9|ENSMUSG00000096727.4|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
mm39_v1_chr7_-_24145107_24145136	8.49388	Rfx5	ENSMUST00000205776.2|Irgc1|ENSMUSG00000062028.9|immunity-related GTPase family, cinema 1
mm39_v1_chr17_+_37581103_37581140	8.20536	Rfx5	ENSMUST00000038580.7|H2-M3|ENSMUSG00000016206.7|histocompatibility 2, M region locus 3
mm39_v1_chr14_+_40794817_40794878	7.61572	Rfx5	ENSMUST00000189865.7|Dydc1|ENSMUSG00000021790.13|DPY30 domain containing 1
mm39_v1_chr9_-_21202545_21202604	7.50737	Rfx5	ENSMUST00000215619.2|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr4_-_126219465_126219508	7.49691	Rfx5	ENSMUST00000102616.8|Tekt2|ENSMUSG00000028845.16|tektin 2
mm39_v1_chr6_-_124756645_124756698	7.2676	Rfx5	ENSMUST00000147669.2|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000128697.8|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000032218.10|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23	ENSMUST00000112475.9|Lrrc23|ENSMUSG00000030125.12|leucine rich repeat containing 23
mm39_v1_chr7_+_44926925_44926960	7.25564	Rfx5	ENSMUST00000210861.2|Slc6a21|ENSMUSG00000070568.13|solute carrier family 6 member 21
mm39_v1_chr9_-_21202353_21202476	6.46947	Rfx5	ENSMUST00000086374.8|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr4_-_126219434_126219447	6.39248	Rfx5	ENSMUST00000131113.8|Tekt2|ENSMUSG00000028845.16|tektin 2
mm39_v1_chr9_-_21202693_21202704	6.3062	Rfx5	ENSMUST00000213407.2|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr2_-_28453374_28453403	6.29668	Rfx5	ENSMUST00000028161.6|Cel|ENSMUSG00000026818.6|carboxyl ester lipase
mm39_v1_chr14_+_40794893_40794900	6.25351	Rfx5	ENSMUST00000161837.2|Dydc1|ENSMUSG00000021790.13|DPY30 domain containing 1
mm39_v1_chr19_+_34194990_34195024	6.23212	Rfx5	ENSMUST00000119603.2|Stambpl1|ENSMUSG00000024776.19|STAM binding protein like 1
mm39_v1_chr14_+_53607470_53607534	5.79974	Rfx5	ENSMUST00000103652.5|Trav14n-3|ENSMUSG00000076824.4|T cell receptor alpha variable 14N-3
mm39_v1_chrX_+_44179759_44179781	5.77593	Rfx5	ENSMUST00000040002.4|Prr32|ENSMUSG00000037086.4|proline rich 32
mm39_v1_chr17_-_25105277_25105327	5.48104	Rfx5	ENSMUST00000234583.2|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2	ENSMUST00000234968.2|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2	ENSMUST00000044252.7|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2
mm39_v1_chr16_-_31898088_31898178	5.38795	Rfx5	ENSMUST00000023467.9|Pak2|ENSMUSG00000022781.9|p21 (RAC1) activated kinase 2
mm39_v1_chr5_+_139135966_139136005	5.07094	Rfx5	ENSMUST00000026975.11|Dnaaf5|ENSMUSG00000025857.11|dynein, axonemal assembly factor 5	ENSMUST00000196441.2|Dnaaf5|ENSMUSG00000025857.11|dynein, axonemal assembly factor 5
mm39_v1_chr5_-_123663440_123663492	4.82146	Rfx5	ENSMUST00000197682.6|Gm49027|ENSMUSG00000114278.3|predicted gene, 49027
mm39_v1_chr5_+_11392646_11392646	4.64532	Rfx5	ENSMUST00000179482.2|Speer1|ENSMUSG00000095829.9|spermatogenesis associated glutamate (E)-rich protein 1
mm39_v1_chr5_+_11821653_11821653	4.64532	Rfx5	ENSMUST00000178158.2|Gm8926|ENSMUSG00000094205.8|predicted gene 8926
mm39_v1_chr5_+_11733203_11733203	4.38982	Rfx5	ENSMUST00000178989.2|Gm8922|ENSMUSG00000094105.8|predicted gene 8922
mm39_v1_chr9_-_51013361_51013382	4.37106	Rfx5	ENSMUST00000170947.3|Hoatz|ENSMUSG00000032057.10|HOATZ cilia and flagella associated protein
mm39_v1_chr5_+_11553780_11553780	4.3142	Rfx5	ENSMUST00000179375.2|Gm8906|ENSMUSG00000095296.8|predicted gene 8906
mm39_v1_chrX_+_158480304_158480327	4.299	Rfx5	ENSMUST00000123433.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr4_-_115638209_115638220	4.24284	Rfx5	ENSMUST00000106521.2|Tex38|ENSMUSG00000044556.4|testis expressed 38
mm39_v1_chr8_-_85794611_85794611	4.1369	Rfx5	ENSMUST00000177563.2|Gm5741|ENSMUSG00000095845.4|predicted gene 5741
mm39_v1_chr5_+_11307124_11307124	4.11396	Rfx5	ENSMUST00000177727.2|Gm8890|ENSMUSG00000096846.8|predicted gene 8890
mm39_v1_chr5_+_11178835_11178835	4.09238	Rfx5	ENSMUST00000178863.2|Gm8879|ENSMUSG00000094025.8|predicted gene 8879
mm39_v1_chr5_+_11467593_11467593	4.07862	Rfx5	ENSMUST00000179679.2|Gm8897|ENSMUSG00000096732.8|predicted gene 8897
mm39_v1_chr8_+_41205245_41205281	3.96477	Rfx5	ENSMUST00000096663.5|Adam25|ENSMUSG00000071937.5|a disintegrin and metallopeptidase domain 25 (testase 2)
mm39_v1_chr1_-_182929025_182929051	3.91083	Rfx5	ENSMUST00000171366.7|Disp1|ENSMUSG00000030768.13|dispatched RND transporter family member 1
mm39_v1_chr4_-_116485118_116485153	3.90864	Rfx5	ENSMUST00000030456.14|Nasp|ENSMUSG00000028693.16|nuclear autoantigenic sperm protein (histone-binding)
mm39_v1_chr5_+_11234174_11234174	3.8581	Rfx5	ENSMUST00000168407.3|Gm5861|ENSMUSG00000095918.8|predicted gene 5861
mm39_v1_chr8_+_106154266_106154278	3.83998	Rfx5	ENSMUST00000067305.8|Lrrc36|ENSMUSG00000054320.17|leucine rich repeat containing 36
mm39_v1_chr8_-_105236506_105236526	3.81424	Rfx5	ENSMUST00000064576.8|Terb1|ENSMUSG00000052616.11|telomere repeat binding bouquet formation protein 1
mm39_v1_chr10_-_123032821_123032868	3.40275	Rfx5	ENSMUST00000219619.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15	ENSMUST00000020334.9|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr14_+_53886861_53886861	3.18743	Rfx5	ENSMUST00000103660.4|Trav15-2-dv6-2|ENSMUSG00000076848.4|T cell receptor alpha variable 15-2-DV6-2
mm39_v1_chr8_+_82582953_82583006	3.16996	Rfx5	ENSMUST00000109851.3|Inpp4b|ENSMUSG00000037940.18|inositol polyphosphate-4-phosphatase, type II
mm39_v1_chr8_+_41246310_41246335	2.96689	Rfx5	ENSMUST00000056331.8|Adam20|ENSMUSG00000046282.8|a disintegrin and metallopeptidase domain 20
mm39_v1_chr7_-_101570393_101570437	2.92102	Rfx5	ENSMUST00000106965.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106968.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106967.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51
mm39_v1_chr8_+_41276027_41276102	2.88559	Rfx5	ENSMUST00000066814.7|Adam39|ENSMUSG00000054033.7|a disintegrin and metallopeptidase domain 39
mm39_v1_chr4_-_112291169_112291190	2.81118	Rfx5	ENSMUST00000058605.3|Skint9|ENSMUSG00000049972.5|selection and upkeep of intraepithelial T cells 9
mm39_v1_chr13_+_25015653_25015675	2.67304	Rfx5	ENSMUST00000038039.3|Tdp2|ENSMUSG00000035958.4|tyrosyl-DNA phosphodiesterase 2	ENSMUST00000223804.2|Tdp2|ENSMUSG00000035958.4|tyrosyl-DNA phosphodiesterase 2
mm39_v1_chr1_-_53031814_53031847	2.31073	Rfx5	ENSMUST00000190831.7|1700019D03Rik|ENSMUSG00000043629.13|RIKEN cDNA 1700019D03 gene	ENSMUST00000190726.2|1700019D03Rik|ENSMUSG00000043629.13|RIKEN cDNA 1700019D03 gene
mm39_v1_chr7_+_100186399_100186439	2.1859	Rfx5	ENSMUST00000120454.3|Coa4|ENSMUSG00000044881.8|cytochrome c oxidase assembly factor 4
mm39_v1_chr10_-_123032881_123032900	2.06808	Rfx5	ENSMUST00000220377.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr5_-_134485081_134485118	2.05306	Rfx5	ENSMUST00000111244.5|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1
mm39_v1_chr4_+_107825529_107825621	2.00579	Rfx5	ENSMUST00000106713.5|Slc1a7|ENSMUSG00000008932.11|solute carrier family 1 (glutamate transporter), member 7	ENSMUST00000238795.2|Slc1a7|ENSMUSG00000008932.11|solute carrier family 1 (glutamate transporter), member 7
mm39_v1_chr7_-_101570382_101570390	1.99213	Rfx5	ENSMUST00000098236.9|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51
mm39_v1_chr19_-_10460031_10460053	1.836	Rfx5	ENSMUST00000236733.2|Ppp1r32|ENSMUSG00000035179.5|protein phosphatase 1, regulatory subunit 32
mm39_v1_chr1_-_155022501_155022536	1.79769	Rfx5	ENSMUST00000027744.10|Mr1|ENSMUSG00000026471.15|major histocompatibility complex, class I-related
mm39_v1_chr14_+_55855484_55855494	1.7029	Rfx5	ENSMUST00000002395.8|Rec8|ENSMUSG00000002324.9|REC8 meiotic recombination protein
mm39_v1_chrX_+_111150171_111150280	1.6358	Rfx5	ENSMUST00000164272.3|4933403O08Rik|ENSMUSG00000079460.12|RIKEN cDNA 4933403O08 gene	ENSMUST00000132037.2|4933403O08Rik|ENSMUSG00000079460.12|RIKEN cDNA 4933403O08 gene
mm39_v1_chr7_-_45343785_45343835	1.55738	Rfx5	ENSMUST00000040636.9|Sec1|ENSMUSG00000040364.9|secretory blood group 1
mm39_v1_chr7_-_33065747_33065747	1.54191	Rfx5	ENSMUST00000179248.2|Scgb2b20|ENSMUSG00000094305.2|secretoglobin, family 2B, member 20
mm39_v1_chr8_+_94941192_94941237	1.43413	Rfx5	ENSMUST00000079961.14|Nup93|ENSMUSG00000032939.15|nucleoporin 93	ENSMUST00000212824.2|Nup93|ENSMUSG00000032939.15|nucleoporin 93
mm39_v1_chr17_+_25105617_25105739	1.38641	Rfx5	ENSMUST00000117890.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000168265.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000120943.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000068508.13|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000119829.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3
mm39_v1_chr7_+_80764564_80764598	1.35037	Rfx5	ENSMUST00000119083.2|Slc28a1|ENSMUSG00000025726.12|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
mm39_v1_chr10_-_7539009_7539073	1.24258	Rfx5	ENSMUST00000163085.8|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	ENSMUST00000159917.8|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm39_v1_chr2_+_121978156_121978177	1.16535	Rfx5	ENSMUST00000102476.5|B2m|ENSMUSG00000060802.9|beta-2 microglobulin
mm39_v1_chr5_-_124327776_124327810	1.05421	Rfx5	ENSMUST00000159677.8|Pitpnm2|ENSMUSG00000029406.16|phosphatidylinositol transfer protein, membrane-associated 2
mm39_v1_chr5_-_36987917_36987999	0.995192	Rfx5	ENSMUST00000031002.10|Man2b2|ENSMUSG00000029119.10|mannosidase 2, alpha B2
mm39_v1_chr7_+_100186259_100186347	0.948289	Rfx5	ENSMUST00000054310.4|Coa4|ENSMUSG00000044881.8|cytochrome c oxidase assembly factor 4
mm39_v1_chr5_-_125371162_125371200	0.907953	Rfx5	ENSMUST00000127148.2|Scarb1|ENSMUSG00000037936.16|scavenger receptor class B, member 1
mm39_v1_chr11_+_61395964_61396037	0.863775	Rfx5	ENSMUST00000102657.10|B9d1|ENSMUSG00000001039.13|B9 protein domain 1
mm39_v1_chr1_+_134333506_134333530	0.695138	Rfx5	ENSMUST00000027726.14|Cyb5r1|ENSMUSG00000026456.19|cytochrome b5 reductase 1
mm39_v1_chr1_-_74932266_74932302	0.652981	Rfx5	ENSMUST00000006721.3|Cryba2|ENSMUSG00000006546.4|crystallin, beta A2
mm39_v1_chr15_+_36179676_36179849	0.503925	Rfx5	ENSMUST00000171205.3|Spag1|ENSMUSG00000037617.13|sperm associated antigen 1
mm39_v1_chr11_+_72332167_72332212	0.269646	Rfx5	ENSMUST00000045633.6|Mybbp1a|ENSMUSG00000040463.17|MYB binding protein (P160) 1a
mm39_v1_chr5_-_140346132_140346183	0.174259	Rfx5	ENSMUST00000196130.5|Snx8|ENSMUSG00000029560.13|sorting nexin 8
