mm39_v1_chr15_+_80456775_80456802	32.0627	Runx1	ENSMUST00000229980.2|Grap2|ENSMUSG00000042351.10|GRB2-related adaptor protein 2
mm39_v1_chr3_-_59009231_59009249	26.0689	Runx1	ENSMUST00000085040.5|Gpr171|ENSMUSG00000050075.9|G protein-coupled receptor 171
mm39_v1_chr2_-_58050494_58050507	19.8964	Runx1	ENSMUST00000028175.7|Cytip|ENSMUSG00000026832.13|cytohesin 1 interacting protein
mm39_v1_chr3_+_103767581_103767609	19.5096	Runx1	ENSMUST00000029433.9|Ptpn22|ENSMUSG00000027843.14|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
mm39_v1_chr16_-_92622972_92623037	18.9108	Runx1	ENSMUST00000023673.14|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr11_-_69786324_69786386	18.4376	Runx1	ENSMUST00000001631.7|Acap1|ENSMUSG00000001588.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
mm39_v1_chr13_-_113237505_113237522	18.053	Runx1	ENSMUST00000224282.2|Gzma|ENSMUSG00000023132.9|granzyme A	ENSMUST00000023897.7|Gzma|ENSMUSG00000023132.9|granzyme A
mm39_v1_chr15_-_66673425_66673448	16.6043	Runx1	ENSMUST00000168589.8|Sla|ENSMUSG00000022372.15|src-like adaptor
mm39_v1_chr1_-_138102972_138103012	16.3123	Runx1	ENSMUST00000195533.6|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000183301.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C
mm39_v1_chr1_+_60785517_60785586	16.2778	Runx1	ENSMUST00000027165.3|Cd28|ENSMUSG00000026012.3|CD28 antigen
mm39_v1_chr1_-_138103021_138103049	16.2023	Runx1	ENSMUST00000182755.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000193650.2|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000182283.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C
mm39_v1_chr14_-_122153185_122153205	14.7441	Runx1	ENSMUST00000055475.9|Gpr18|ENSMUSG00000050350.9|G protein-coupled receptor 18
mm39_v1_chr15_-_78377926_78377956	14.2641	Runx1	ENSMUST00000163494.3|Il2rb|ENSMUSG00000068227.10|interleukin 2 receptor, beta chain
mm39_v1_chrX_-_7956682_7956744	14.0012	Runx1	ENSMUST00000033505.7|Was|ENSMUSG00000031165.7|Wiskott-Aldrich syndrome
mm39_v1_chr11_-_46280298_46280332	13.5831	Runx1	ENSMUST00000109237.9|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chrX_-_56384089_56384140	13.3793	Runx1	ENSMUST00000033468.11|Arhgef6|ENSMUSG00000031133.13|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr11_-_52173391_52173405	13.0835	Runx1	ENSMUST00000086844.10|Tcf7|ENSMUSG00000000782.17|transcription factor 7, T cell specific
mm39_v1_chr7_+_44221791_44221840	13.0741	Runx1	ENSMUST00000002274.10|Napsa|ENSMUSG00000002204.10|napsin A aspartic peptidase
mm39_v1_chr11_-_46280336_46280351	12.8636	Runx1	ENSMUST00000020664.13|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr4_-_129467430_129467441	12.6453	Runx1	ENSMUST00000102596.8|Lck|ENSMUSG00000000409.15|lymphocyte protein tyrosine kinase
mm39_v1_chr15_-_9529898_9529932	12.2658	Runx1	ENSMUST00000228782.2|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor	ENSMUST00000003981.6|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor
mm39_v1_chr2_+_164790139_164790165	12.1675	Runx1	ENSMUST00000017881.3|Mmp9|ENSMUSG00000017737.3|matrix metallopeptidase 9
mm39_v1_chr19_-_10807409_10807427	12.1071	Runx1	ENSMUST00000080292.12|Cd6|ENSMUSG00000024670.18|CD6 antigen
mm39_v1_chr19_-_10807285_10807406	11.8369	Runx1	ENSMUST00000039043.15|Cd6|ENSMUSG00000024670.18|CD6 antigen
mm39_v1_chr18_-_35782412_35782427	10.9951	Runx1	ENSMUST00000025211.6|Mzb1|ENSMUSG00000024353.6|marginal zone B and B1 cell-specific protein 1
mm39_v1_chr6_-_136918495_136918536	10.9417	Runx1	ENSMUST00000111892.8|Arhgdib|ENSMUSG00000030220.14|Rho, GDP dissociation inhibitor (GDI) beta
mm39_v1_chr11_-_46280281_46280295	10.8722	Runx1	ENSMUST00000101306.4|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr6_+_41118120_41118134	10.6815	Runx1	ENSMUST00000103273.3|Trbv15|ENSMUSG00000076472.3|T cell receptor beta, variable 15
mm39_v1_chr15_-_97742134_97742199	10.4789	Runx1	ENSMUST00000119670.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000116409.9|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr19_+_4264292_4264417	10.1428	Runx1	ENSMUST00000046506.7|Clcf1|ENSMUSG00000040663.10|cardiotrophin-like cytokine factor 1
mm39_v1_chr11_+_95733109_95733136	10.1234	Runx1	ENSMUST00000107714.9|Gngt2|ENSMUSG00000038811.14|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	ENSMUST00000107711.8|Gngt2|ENSMUSG00000038811.14|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
mm39_v1_chrX_+_158480304_158480327	10.1089	Runx1	ENSMUST00000123433.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chrX_+_106299484_106299671	10.0722	Runx1	ENSMUST00000101294.9|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174	ENSMUST00000118820.8|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174	ENSMUST00000120971.8|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174
mm39_v1_chr5_-_107873883_107873905	9.83596	Runx1	ENSMUST00000159263.3|Gfi1|ENSMUSG00000029275.19|growth factor independent 1 transcription repressor
mm39_v1_chr3_-_96721829_96721853	9.69816	Runx1	ENSMUST00000047702.8|Cd160|ENSMUSG00000038304.15|CD160 antigen
mm39_v1_chr7_-_126736979_126737001	9.48739	Runx1	ENSMUST00000049931.6|Spn|ENSMUSG00000051457.8|sialophorin
mm39_v1_chr12_-_112824506_112824588	9.47854	Runx1	ENSMUST00000021729.9|Gpr132|ENSMUSG00000021298.9|G protein-coupled receptor 132
mm39_v1_chr4_+_134847949_134847973	9.42095	Runx1	ENSMUST00000056977.14|Runx3|ENSMUSG00000070691.11|runt related transcription factor 3
mm39_v1_chr15_-_97742045_97742130	9.41178	Runx1	ENSMUST00000120683.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr14_+_71011744_71011795	9.37458	Runx1	ENSMUST00000022698.8|Dok2|ENSMUSG00000022102.14|docking protein 2
mm39_v1_chr11_-_79421397_79421435	9.34473	Runx1	ENSMUST00000103236.4|Evi2a|ENSMUSG00000078771.11|ecotropic viral integration site 2a	ENSMUST00000170422.4|Evi2|ENSMUSG00000070354.14|ecotropic viral integration site 2	ENSMUST00000170799.8|Evi2a|ENSMUSG00000078771.11|ecotropic viral integration site 2a
mm39_v1_chr12_+_85733415_85733478	9.06363	Runx1	ENSMUST00000040536.6|Batf|ENSMUSG00000034266.7|basic leucine zipper transcription factor, ATF-like
mm39_v1_chr6_-_136918671_136918759	8.80903	Runx1	ENSMUST00000032344.12|Arhgdib|ENSMUSG00000030220.14|Rho, GDP dissociation inhibitor (GDI) beta
mm39_v1_chr19_-_10807220_10807267	8.65723	Runx1	ENSMUST00000174176.3|Cd6|ENSMUSG00000024670.18|CD6 antigen
mm39_v1_chr6_-_69521891_69521929	8.36516	Runx1	ENSMUST00000103356.4|Igkv4-57-1|ENSMUSG00000076555.4|immunoglobulin kappa variable 4-57-1
mm39_v1_chr17_+_47906985_47907029	7.92602	Runx1	ENSMUST00000182539.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr2_+_172235702_172235750	7.5208	Runx1	ENSMUST00000099061.9|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4	ENSMUST00000103073.9|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4
mm39_v1_chr17_-_45125537_45125684	7.48234	Runx1	ENSMUST00000113571.10|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2
mm39_v1_chr17_+_31427023_31427086	7.39498	Runx1	ENSMUST00000173776.2|Ubash3a|ENSMUSG00000042345.16|ubiquitin associated and SH3 domain containing, A	ENSMUST00000048656.15|Ubash3a|ENSMUSG00000042345.16|ubiquitin associated and SH3 domain containing, A
mm39_v1_chr4_-_46404224_46404239	7.37918	Runx1	ENSMUST00000107764.9|Hemgn|ENSMUSG00000028332.14|hemogen
mm39_v1_chr17_+_29712008_29712080	7.32351	Runx1	ENSMUST00000234665.2|Pim1|ENSMUSG00000024014.9|proviral integration site 1
mm39_v1_chr1_-_164763091_164763096	7.31737	Runx1	ENSMUST00000027860.8|Xcl1|ENSMUSG00000026573.8|chemokine (C motif) ligand 1
mm39_v1_chr15_-_103163860_103163879	7.22941	Runx1	ENSMUST00000075192.13|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2
mm39_v1_chr18_-_62313019_62313057	7.16981	Runx1	ENSMUST00000053640.5|Adrb2|ENSMUSG00000045730.5|adrenergic receptor, beta 2
mm39_v1_chr5_-_92475927_92475945	6.99689	Runx1	ENSMUST00000113093.5|Cxcl9|ENSMUSG00000029417.10|chemokine (C-X-C motif) ligand 9
mm39_v1_chr5_-_72893941_72893953	6.82652	Runx1	ENSMUST00000169534.6|Txk|ENSMUSG00000054892.15|TXK tyrosine kinase
mm39_v1_chr2_-_73316053_73316114	6.81402	Runx1	ENSMUST00000102680.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chrX_+_7445806_7445926	6.73646	Runx1	ENSMUST00000234363.2|Foxp3|ENSMUSG00000039521.14|forkhead box P3	ENSMUST00000235116.2|Foxp3|ENSMUSG00000039521.14|forkhead box P3	ENSMUST00000115739.9|Foxp3|ENSMUSG00000039521.14|forkhead box P3	ENSMUST00000234574.2|Foxp3|ENSMUSG00000039521.14|forkhead box P3	ENSMUST00000115740.9|Foxp3|ENSMUSG00000039521.14|forkhead box P3
mm39_v1_chr15_+_97259060_97259106	6.57028	Runx1	ENSMUST00000228521.2|Pced1b|ENSMUSG00000044250.9|PC-esterase domain containing 1B	ENSMUST00000226495.2|Pced1b|ENSMUSG00000044250.9|PC-esterase domain containing 1B
mm39_v1_chr2_+_172235820_172235884	6.43777	Runx1	ENSMUST00000109136.3|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4	ENSMUST00000228775.2|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4
mm39_v1_chr1_+_171216480_171216610	6.15266	Runx1	ENSMUST00000056449.9|Arhgap30|ENSMUSG00000048865.17|Rho GTPase activating protein 30
mm39_v1_chr11_+_6511133_6511230	6.12542	Runx1	ENSMUST00000160633.8|Ccm2|ENSMUSG00000000378.16|cerebral cavernous malformation 2	ENSMUST00000109721.3|Ccm2|ENSMUSG00000000378.16|cerebral cavernous malformation 2
mm39_v1_chr14_-_56499690_56499717	6.08004	Runx1	ENSMUST00000015581.6|Gzmb|ENSMUSG00000015437.6|granzyme B
mm39_v1_chr7_-_24831892_24831937	6.04848	Runx1	ENSMUST00000108418.11|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000175774.9|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000108415.10|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000098679.10|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000108417.10|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000108416.10|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000108413.8|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2	ENSMUST00000176408.8|Pou2f2|ENSMUSG00000008496.20|POU domain, class 2, transcription factor 2
mm39_v1_chr2_-_27974889_27974903	5.81367	Runx1	ENSMUST00000028179.15|Fcnb|ENSMUSG00000026835.16|ficolin B	ENSMUST00000117486.8|Fcnb|ENSMUSG00000026835.16|ficolin B	ENSMUST00000135472.2|Fcnb|ENSMUSG00000026835.16|ficolin B
mm39_v1_chr7_+_126184108_126184127	5.62338	Runx1	ENSMUST00000039522.8|Apobr|ENSMUSG00000042759.13|apolipoprotein B receptor
mm39_v1_chr2_+_163662752_163662817	5.47213	Runx1	ENSMUST00000029188.8|Ccn5|ENSMUSG00000027656.8|cellular communication network factor 5
mm39_v1_chr12_-_114878652_114878706	5.08596	Runx1	ENSMUST00000103515.2|Ighv1-39|ENSMUSG00000095130.2|immunoglobulin heavy variable 1-39
mm39_v1_chr14_+_53994813_53994813	4.94759	Runx1	ENSMUST00000180380.3|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr7_+_30264835_30264858	4.88559	Runx1	ENSMUST00000043850.14|Igflr1|ENSMUSG00000036826.15|IGF-like family receptor 1
mm39_v1_chrX_+_158410528_158410565	4.86408	Runx1	ENSMUST00000073094.10|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr2_+_32611067_32611155	4.72112	Runx1	ENSMUST00000074248.11|Sh2d3c|ENSMUSG00000059013.13|SH2 domain containing 3C
mm39_v1_chr17_-_37269330_37269393	4.64979	Runx1	ENSMUST00000113669.9|Polr1h|ENSMUSG00000036315.14|RNA polymerase I subunit H
mm39_v1_chr13_+_76727787_76727798	4.6307	Runx1	ENSMUST00000126960.8|Mctp1|ENSMUSG00000021596.17|multiple C2 domains, transmembrane 1	ENSMUST00000109583.9|Mctp1|ENSMUSG00000021596.17|multiple C2 domains, transmembrane 1
mm39_v1_chr1_+_36346824_36346850	4.57435	Runx1	ENSMUST00000142319.8|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)	ENSMUST00000097778.9|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)	ENSMUST00000115031.8|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)	ENSMUST00000115032.8|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)	ENSMUST00000137906.2|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)	ENSMUST00000115029.2|Arid5a|ENSMUSG00000037447.17|AT rich interactive domain 5A (MRF1-like)
mm39_v1_chr17_-_37269425_37269447	4.55583	Runx1	ENSMUST00000172518.8|Polr1h|ENSMUSG00000036315.14|RNA polymerase I subunit H
mm39_v1_chr1_+_40554513_40554596	4.54008	Runx1	ENSMUST00000027237.12|Il18rap|ENSMUSG00000026068.12|interleukin 18 receptor accessory protein
mm39_v1_chr16_-_95387444_95387454	4.45225	Runx1	ENSMUST00000233269.2|Erg|ENSMUSG00000040732.21|ETS transcription factor
mm39_v1_chr7_-_43182595_43182615	4.36705	Runx1	ENSMUST00000205503.2|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chr11_+_87684299_87684407	4.34114	Runx1	ENSMUST00000020779.11|Mpo|ENSMUSG00000009350.14|myeloperoxidase
mm39_v1_chr11_-_95733235_95733275	4.26198	Runx1	ENSMUST00000059026.10|Abi3|ENSMUSG00000018381.16|ABI family member 3
mm39_v1_chr17_-_37269153_37269210	4.22616	Runx1	ENSMUST00000172823.2|Polr1h|ENSMUSG00000036315.14|RNA polymerase I subunit H
mm39_v1_chr17_+_26882171_26882205	4.19161	Runx1	ENSMUST00000236346.2|Atp6v0e|ENSMUSG00000015575.16|ATPase, H+ transporting, lysosomal V0 subunit E
mm39_v1_chr19_+_4264470_4264486	4.16885	Runx1	ENSMUST00000237171.2|Gm45928|ENSMUSG00000117873.2|predicted gene, 45928
mm39_v1_chr4_+_102848981_102849034	4.14242	Runx1	ENSMUST00000140654.9|Dynlt5|ENSMUSG00000028523.15|dynein light chain Tctex-type 5
mm39_v1_chr11_+_75422516_75422569	4.02002	Runx1	ENSMUST00000149727.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000108433.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000042561.14|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2	ENSMUST00000143035.8|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2
mm39_v1_chr14_+_52921421_52921421	4.01098	Runx1	ENSMUST00000200127.2|Trav7d-2|ENSMUSG00000105533.2|T cell receptor alpha variable 7D-2
mm39_v1_chr14_+_54183465_54183530	3.82853	Runx1	ENSMUST00000197130.5|Trdv2-1|ENSMUSG00000076865.7|T cell receptor delta variable 2-1	ENSMUST00000103677.3|Trdv2-1|ENSMUSG00000076865.7|T cell receptor delta variable 2-1
mm39_v1_chr9_-_56151334_56151382	3.61245	Runx1	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr17_+_44445659_44445684	3.44316	Runx1	ENSMUST00000239215.2|Clic5|ENSMUSG00000023959.11|chloride intracellular channel 5
mm39_v1_chrX_-_12026594_12026719	3.43562	Runx1	ENSMUST00000043441.13|Bcor|ENSMUSG00000040363.16|BCL6 interacting corepressor
mm39_v1_chr19_+_4264437_4264452	3.43439	Runx1	ENSMUST00000235355.2|Clcf1|ENSMUSG00000040663.10|cardiotrophin-like cytokine factor 1
mm39_v1_chr12_-_115706126_115706323	3.41912	Runx1	ENSMUST00000166645.2|Ighv1-71|ENSMUSG00000096577.3|immunoglobulin heavy variable 1-71	ENSMUST00000196690.2|Ighv1-71|ENSMUSG00000096577.3|immunoglobulin heavy variable 1-71
mm39_v1_chr15_+_80595486_80595541	3.36873	Runx1	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr11_+_75422925_75422938	3.32701	Runx1	ENSMUST00000169547.9|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2
mm39_v1_chr11_-_83540175_83540191	3.2421	Runx1	ENSMUST00000001008.6|Ccl3|ENSMUSG00000000982.6|chemokine (C-C motif) ligand 3
mm39_v1_chr19_-_45619559_45619597	3.20818	Runx1	ENSMUST00000160718.9|Fbxw4|ENSMUSG00000040913.12|F-box and WD-40 domain protein 4
mm39_v1_chr1_-_161616031_161616079	3.12381	Runx1	ENSMUST00000000834.4|Fasl|ENSMUSG00000000817.11|Fas ligand (TNF superfamily, member 6)
mm39_v1_chr9_-_107648144_107648206	3.10801	Runx1	ENSMUST00000183248.3|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182022.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000035199.13|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182659.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5
mm39_v1_chr9_-_103569984_103570011	3.01658	Runx1	ENSMUST00000049452.15|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chr12_-_115410489_115410525	2.98382	Runx1	ENSMUST00000194581.2|Ighv1-62-2|ENSMUSG00000096078.3|immunoglobulin heavy variable 1-62-2
mm39_v1_chr8_+_84852609_84852628	2.91154	Runx1	ENSMUST00000093380.5|Podnl1|ENSMUSG00000012889.9|podocan-like 1
mm39_v1_chr16_-_16681839_16681869	2.89107	Runx1	ENSMUST00000100136.4|Igll1|ENSMUSG00000075370.13|immunoglobulin lambda-like polypeptide 1
mm39_v1_chr4_-_70328659_70328702	2.88993	Runx1	ENSMUST00000144099.8|Cdk5rap2|ENSMUSG00000039298.17|CDK5 regulatory subunit associated protein 2
mm39_v1_chr14_-_66518399_66518501	2.86172	Runx1	ENSMUST00000111121.2|Ptk2b|ENSMUSG00000059456.14|PTK2 protein tyrosine kinase 2 beta	ENSMUST00000022622.14|Ptk2b|ENSMUSG00000059456.14|PTK2 protein tyrosine kinase 2 beta	ENSMUST00000089250.9|Ptk2b|ENSMUSG00000059456.14|PTK2 protein tyrosine kinase 2 beta
mm39_v1_chr15_-_98505508_98505519	2.85413	Runx1	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr10_+_118276949_118276954	2.83452	Runx1	ENSMUST00000068592.5|Ifng|ENSMUSG00000055170.5|interferon gamma
mm39_v1_chr4_-_133600308_133600379	2.78596	Runx1	ENSMUST00000137486.3|Rps6ka1|ENSMUSG00000003644.18|ribosomal protein S6 kinase polypeptide 1
mm39_v1_chr11_-_115426618_115426718	2.7483	Runx1	ENSMUST00000121185.8|Sumo2|ENSMUSG00000020738.17|small ubiquitin-like modifier 2	ENSMUST00000117589.8|Sumo2|ENSMUSG00000020738.17|small ubiquitin-like modifier 2
mm39_v1_chrX_-_100777806_100777875	2.64578	Runx1	ENSMUST00000056614.7|Cxcr3|ENSMUSG00000050232.7|chemokine (C-X-C motif) receptor 3
mm39_v1_chr11_+_75422953_75422979	2.64024	Runx1	ENSMUST00000127226.3|Slc43a2|ENSMUSG00000038178.17|solute carrier family 43, member 2
mm39_v1_chr11_-_100986192_100986266	2.63757	Runx1	ENSMUST00000019447.15|Psmc3ip|ENSMUSG00000019303.15|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
mm39_v1_chr3_-_86049988_86050009	2.59148	Runx1	ENSMUST00000029722.7|Rps3a1|ENSMUSG00000028081.7|ribosomal protein S3A1
mm39_v1_chr12_-_34578842_34578903	2.57957	Runx1	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr14_+_53872276_53872290	2.54443	Runx1	ENSMUST00000103658.4|Trav13-2|ENSMUSG00000076846.4|T cell receptor alpha variable 13-2
mm39_v1_chr9_+_113641615_113641685	2.53955	Runx1	ENSMUST00000111838.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000166734.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000214522.2|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000163895.3|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2
mm39_v1_chr7_+_126184141_126184164	2.40325	Runx1	ENSMUST00000137646.8|Apobr|ENSMUSG00000042759.13|apolipoprotein B receptor
mm39_v1_chr7_-_43182504_43182580	2.40238	Runx1	ENSMUST00000004728.12|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chr7_-_126183392_126183581	2.31783	Runx1	ENSMUST00000128970.8|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	ENSMUST00000116269.9|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm39_v1_chr12_-_115964081_115964136	2.26401	Runx1	ENSMUST00000103552.2|Ighv1-85|ENSMUSG00000096150.2|immunoglobulin heavy variable 1-85
mm39_v1_chr15_-_102630589_102630613	2.23939	Runx1	ENSMUST00000023818.11|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr4_+_132903646_132903682	2.227	Runx1	ENSMUST00000105912.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr11_-_24025054_24025054	2.19306	Runx1	ENSMUST00000068360.2|A830031A19Rik|ENSMUSG00000055010.2|RIKEN cDNA A830031A19 gene
mm39_v1_chr10_-_35587888_35587888	2.17009	Runx1	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chr6_-_69477770_69477826	2.15588	Runx1	ENSMUST00000197448.2|Igkv4-58|ENSMUSG00000095633.3|immunoglobulin kappa variable 4-58
mm39_v1_chr2_-_73316809_73316821	2.10953	Runx1	ENSMUST00000141264.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr13_+_76727799_76727847	2.10619	Runx1	ENSMUST00000109589.3|Mctp1|ENSMUSG00000021596.17|multiple C2 domains, transmembrane 1
mm39_v1_chr15_-_102630496_102630572	2.07797	Runx1	ENSMUST00000171838.2|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr16_+_91188609_91188657	2.0518	Runx1	ENSMUST00000160764.2|Gm21970|ENSMUSG00000093701.8|predicted gene 21970
mm39_v1_chr19_+_5618029_5618090	1.91638	Runx1	ENSMUST00000235575.2|Ap5b1|ENSMUSG00000049562.7|adaptor-related protein complex 5, beta 1 subunit	ENSMUST00000235542.2|Ap5b1|ENSMUSG00000049562.7|adaptor-related protein complex 5, beta 1 subunit
mm39_v1_chr11_-_108234743_108234782	1.90719	Runx1	ENSMUST00000059595.11|Prkca|ENSMUSG00000050965.15|protein kinase C, alpha
mm39_v1_chr2_-_25911691_25911791	1.81383	Runx1	ENSMUST00000036509.14|Ubac1|ENSMUSG00000036352.17|ubiquitin associated domain containing 1
mm39_v1_chr11_-_53525520_53525536	1.77171	Runx1	ENSMUST00000020650.2|Il13|ENSMUSG00000020383.2|interleukin 13
mm39_v1_chr10_-_80382611_80382657	1.76555	Runx1	ENSMUST00000183233.9|Rexo1|ENSMUSG00000047417.19|REX1, RNA exonuclease 1	ENSMUST00000182604.8|Rexo1|ENSMUSG00000047417.19|REX1, RNA exonuclease 1
mm39_v1_chr8_-_11058458_11058458	1.75953	Runx1	ENSMUST00000040514.8|Irs2|ENSMUSG00000038894.8|insulin receptor substrate 2
mm39_v1_chr1_-_161615927_161615944	1.70467	Runx1	ENSMUST00000193648.2|Fasl|ENSMUSG00000000817.11|Fas ligand (TNF superfamily, member 6)
mm39_v1_chr17_+_47604995_47604995	1.67798	Runx1	ENSMUST00000190020.4|Trerf1|ENSMUSG00000064043.16|transcriptional regulating factor 1
mm39_v1_chr6_-_99073156_99073201	1.66017	Runx1	ENSMUST00000175886.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr11_-_54140462_54140493	1.65958	Runx1	ENSMUST00000019060.6|Csf2|ENSMUSG00000018916.6|colony stimulating factor 2 (granulocyte-macrophage)
mm39_v1_chr10_-_5144699_5144765	1.62375	Runx1	ENSMUST00000215467.2|Syne1|ENSMUSG00000096054.4|spectrin repeat containing, nuclear envelope 1
mm39_v1_chr3_-_88286006_88286066	1.61943	Runx1	ENSMUST00000098956.3|Bglap2|ENSMUSG00000074486.3|bone gamma-carboxyglutamate protein 2
mm39_v1_chr7_-_126183716_126183781	1.5792	Runx1	ENSMUST00000150311.8|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm39_v1_chr11_-_72106418_72106418	1.56728	Runx1	ENSMUST00000021157.9|Med31|ENSMUSG00000020801.9|mediator complex subunit 31
mm39_v1_chr17_+_33857030_33857086	1.54974	Runx1	ENSMUST00000052079.8|Pram1|ENSMUSG00000032739.17|PML-RAR alpha-regulated adaptor molecule 1
mm39_v1_chr2_+_164302863_164302981	1.53046	Runx1	ENSMUST00000072452.11|Sys1|ENSMUSG00000045503.17|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm39_v1_chr5_+_24618380_24618397	1.52664	Runx1	ENSMUST00000049346.10|Asic3|ENSMUSG00000038276.13|acid-sensing (proton-gated) ion channel 3
mm39_v1_chr9_-_44144772_44144841	1.47405	Runx1	ENSMUST00000205755.2|Cbl|ENSMUSG00000034342.10|Casitas B-lineage lymphoma
mm39_v1_chr5_+_139392142_139392189	1.45453	Runx1	ENSMUST00000052176.9|C130050O18Rik|ENSMUSG00000044092.9|RIKEN cDNA C130050O18 gene
mm39_v1_chr5_-_75205358_75205435	1.4495	Runx1	ENSMUST00000075452.7|Chic2|ENSMUSG00000029229.9|cysteine-rich hydrophobic domain 2
mm39_v1_chr9_+_7272514_7272537	1.36588	Runx1	ENSMUST00000015394.10|Mmp13|ENSMUSG00000050578.11|matrix metallopeptidase 13
mm39_v1_chr1_-_14380418_14380463	1.36119	Runx1	ENSMUST00000027066.13|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000168081.9|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr2_-_25911544_25911570	1.34737	Runx1	ENSMUST00000136750.3|Ubac1|ENSMUSG00000036352.17|ubiquitin associated domain containing 1
mm39_v1_chr17_-_45125468_45125525	1.31992	Runx1	ENSMUST00000159943.8|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2	ENSMUST00000160673.8|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2
mm39_v1_chr16_-_58539433_58539433	1.22124	Runx1	ENSMUST00000089318.5|Gpr15|ENSMUSG00000047293.8|G protein-coupled receptor 15
mm39_v1_chr11_-_99511257_99511262	1.19569	Runx1	ENSMUST00000073853.3|Gm11562|ENSMUSG00000062278.3|predicted gene 11562
mm39_v1_chr1_-_192946359_192946384	1.18867	Runx1	ENSMUST00000161737.8|Hsd11b1|ENSMUSG00000016194.15|hydroxysteroid 11-beta dehydrogenase 1
mm39_v1_chr6_+_11907808_11907910	1.16733	Runx1	ENSMUST00000155037.4|Phf14|ENSMUSG00000029629.18|PHD finger protein 14
mm39_v1_chr10_-_14593935_14593972	1.15942	Runx1	ENSMUST00000020016.5|Gje1|ENSMUSG00000019867.5|gap junction protein, epsilon 1
mm39_v1_chr19_+_5618096_5618117	1.04515	Runx1	ENSMUST00000096318.4|Ap5b1|ENSMUSG00000049562.7|adaptor-related protein complex 5, beta 1 subunit
mm39_v1_chr4_-_6990774_6990823	1.03779	Runx1	ENSMUST00000039987.4|Tox|ENSMUSG00000041272.12|thymocyte selection-associated high mobility group box
mm39_v1_chrX_-_20816841_20816852	1.0174	Runx1	ENSMUST00000009550.14|Elk1|ENSMUSG00000009406.14|ELK1, member of ETS oncogene family
mm39_v1_chr4_-_137137088_137137102	0.986759	Runx1	ENSMUST00000024200.7|Cela3a|ENSMUSG00000078520.4|chymotrypsin-like elastase family, member 3A
mm39_v1_chr11_+_116324913_116324932	0.929704	Runx1	ENSMUST00000057676.7|Ubald2|ENSMUSG00000050628.7|UBA-like domain containing 2
mm39_v1_chr16_+_25620652_25620678	0.908277	Runx1	ENSMUST00000115304.8|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000115305.2|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000040231.13|Trp63|ENSMUSG00000022510.15|transformation related protein 63	ENSMUST00000115306.8|Trp63|ENSMUSG00000022510.15|transformation related protein 63
mm39_v1_chr3_+_102965601_102965684	0.878013	Runx1	ENSMUST00000029445.13|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000200069.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene
mm39_v1_chr17_+_75485791_75485820	0.857605	Runx1	ENSMUST00000135447.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1	ENSMUST00000112516.8|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr2_+_153780138_153780143	0.725145	Runx1	ENSMUST00000109757.8|Bpifb4|ENSMUSG00000074665.12|BPI fold containing family B, member 4	ENSMUST00000154281.3|Bpifb4|ENSMUSG00000074665.12|BPI fold containing family B, member 4
mm39_v1_chr11_+_11414256_11414256	0.608384	Runx1	ENSMUST00000020410.11|Spata48|ENSMUSG00000020191.12|spermatogenesis associated 48
mm39_v1_chr16_-_94046925_94046944	0.557811	Runx1	ENSMUST00000228910.2|Hlcs|ENSMUSG00000040820.17|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm39_v1_chrX_+_162691978_162692013	0.512107	Runx1	ENSMUST00000069041.15|Ap1s2|ENSMUSG00000031367.16|adaptor-related protein complex 1, sigma 2 subunit
mm39_v1_chr11_-_110058899_110059022	0.497015	Runx1	ENSMUST00000044850.4|Abca9|ENSMUSG00000041797.8|ATP-binding cassette, sub-family A (ABC1), member 9
mm39_v1_chr12_-_115276219_115276272	0.481051	Runx1	ENSMUST00000103529.4|Ighv1-58|ENSMUSG00000095889.2|immunoglobulin heavy variable 1-58
mm39_v1_chr12_+_114594300_114594300	0.480491	Runx1	ENSMUST00000095364.3|ENSMUSG00000090765.2|ENSMUSG00000090765.2|
mm39_v1_chr2_-_89774457_89774457	0.429987	Runx1	ENSMUST00000090695.3|Olfr1259|ENSMUSG00000068806.6|olfactory receptor 1259
mm39_v1_chr10_-_12490424_12490575	0.387299	Runx1	ENSMUST00000217994.2|Utrn|ENSMUSG00000019820.12|utrophin
mm39_v1_chr5_+_87955941_87955987	0.380389	Runx1	ENSMUST00000072539.12|Csn1s2b|ENSMUSG00000061388.12|casein alpha s2-like B	ENSMUST00000113279.8|Csn1s2b|ENSMUSG00000061388.12|casein alpha s2-like B	ENSMUST00000101057.8|Csn1s2b|ENSMUSG00000061388.12|casein alpha s2-like B	ENSMUST00000197301.2|Csn1s2b|ENSMUSG00000061388.12|casein alpha s2-like B
mm39_v1_chr6_+_136495784_136495808	0.350851	Runx1	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr12_+_73984427_73984445	0.306999	Runx1	ENSMUST00000221833.2|Snapc1l|ENSMUSG00000114046.2|small nuclear RNA activating complex, polypeptide 1 like
mm39_v1_chr7_-_45083688_45083733	0.278285	Runx1	ENSMUST00000210439.2|Ruvbl2|ENSMUSG00000003868.15|RuvB-like protein 2
mm39_v1_chr11_-_100098333_100098374	0.268997	Runx1	ENSMUST00000007272.8|Krt14|ENSMUSG00000045545.9|keratin 14
mm39_v1_chr17_-_34962823_34962865	0.262451	Runx1	ENSMUST00000069507.9|C4b|ENSMUSG00000073418.5|complement component 4B (Chido blood group)
mm39_v1_chr2_+_125876566_125876600	0.254337	Runx1	ENSMUST00000064794.14|Fgf7|ENSMUSG00000027208.15|fibroblast growth factor 7
mm39_v1_chr11_-_3321307_3321409	0.208409	Runx1	ENSMUST00000101640.10|Limk2|ENSMUSG00000020451.18|LIM motif-containing protein kinase 2	ENSMUST00000101642.10|Limk2|ENSMUSG00000020451.18|LIM motif-containing protein kinase 2
mm39_v1_chr8_-_55340024_55340185	0.171031	Runx1	ENSMUST00000176866.8|Wdr17|ENSMUSG00000039375.17|WD repeat domain 17
mm39_v1_chr6_+_21985902_21985971	0.16806	Runx1	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr17_+_75485906_75485956	0.167053	Runx1	ENSMUST00000112514.2|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr16_+_43330630_43330671	0.152671	Runx1	ENSMUST00000114695.3|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr12_-_115567853_115568053	0.146516	Runx1	ENSMUST00000103538.3|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67	ENSMUST00000198646.2|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67
mm39_v1_chr11_-_100305654_100305679	0.124023	Runx1	ENSMUST00000066489.13|P3h4|ENSMUSG00000006931.16|prolyl 3-hydroxylase family member 4 (non-enzymatic)
mm39_v1_chr10_+_127575407_127575457	0.111957	Runx1	ENSMUST00000054287.9|Zbtb39|ENSMUSG00000044617.9|zinc finger and BTB domain containing 39
mm39_v1_chr5_-_138153956_138154006	0.0863918	Runx1	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr14_-_56299764_56299770	0.0192948	Runx1	ENSMUST00000043249.10|Mcpt4|ENSMUSG00000061068.8|mast cell protease 4
