mm39_v1_chr1_-_65162267_65162373	5.3793	Six3_Six1_Six2	ENSMUST00000050047.4|D630023F18Rik|ENSMUSG00000044816.11|RIKEN cDNA D630023F18 gene	ENSMUST00000148020.8|D630023F18Rik|ENSMUSG00000044816.11|RIKEN cDNA D630023F18 gene
mm39_v1_chr7_-_79765042_79765140	3.28608	Six3_Six1_Six2	ENSMUST00000206714.2|Idh2|ENSMUSG00000030541.17|isocitrate dehydrogenase 2 (NADP+), mitochondrial	ENSMUST00000107384.10|Idh2|ENSMUSG00000030541.17|isocitrate dehydrogenase 2 (NADP+), mitochondrial
mm39_v1_chr9_+_32305259_32305281	3.28198	Six3_Six1_Six2	ENSMUST00000172015.3|Kcnj1|ENSMUSG00000041248.10|potassium inwardly-rectifying channel, subfamily J, member 1
mm39_v1_chr14_+_75479727_75479794	3.26185	Six3_Six1_Six2	ENSMUST00000022576.10|Cpb2|ENSMUSG00000021999.10|carboxypeptidase B2 (plasma)
mm39_v1_chr9_+_98305014_98305014	2.70881	Six3_Six1_Six2	ENSMUST00000052068.11|Rbp1|ENSMUSG00000046402.11|retinol binding protein 1, cellular
mm39_v1_chr2_+_106523532_106523624	2.61905	Six3_Six1_Six2	ENSMUST00000111063.8|Mpped2|ENSMUSG00000016386.16|metallophosphoesterase domain containing 2
mm39_v1_chr16_+_22738987_22739016	2.43118	Six3_Six1_Six2	ENSMUST00000023587.12|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr5_+_122239830_122239861	2.25849	Six3_Six1_Six2	ENSMUST00000146733.5|Myl2|ENSMUSG00000013936.13|myosin, light polypeptide 2, regulatory, cardiac, slow
mm39_v1_chr15_+_98468885_98468908	2.24905	Six3_Six1_Six2	ENSMUST00000023728.8|Tex49|ENSMUSG00000022993.8|testis expressed 49
mm39_v1_chr15_-_75766321_75766355	2.04228	Six3_Six1_Six2	ENSMUST00000023237.8|Naprt|ENSMUSG00000022574.8|nicotinate phosphoribosyltransferase
mm39_v1_chr3_+_145926709_145926764	1.9616	Six3_Six1_Six2	ENSMUST00000039164.4|Lpar3|ENSMUSG00000036832.6|lysophosphatidic acid receptor 3
mm39_v1_chr10_-_128016135_128016187	1.91099	Six3_Six1_Six2	ENSMUST00000238843.2|Rbms2|ENSMUSG00000040043.18|RNA binding motif, single stranded interacting protein 2	ENSMUST00000099139.9|Rbms2|ENSMUSG00000040043.18|RNA binding motif, single stranded interacting protein 2
mm39_v1_chrX_-_141749704_141749730	1.89094	Six3_Six1_Six2	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr7_+_30676465_30676470	1.84469	Six3_Six1_Six2	ENSMUST00000058093.6|Fam187b|ENSMUSG00000046826.8|family with sequence similarity 187, member B
mm39_v1_chr7_+_15484302_15484306	1.76869	Six3_Six1_Six2	ENSMUST00000098802.10|Obox5|ENSMUSG00000074366.10|oocyte specific homeobox 5	ENSMUST00000173053.2|Obox5|ENSMUSG00000074366.10|oocyte specific homeobox 5
mm39_v1_chr3_-_92734546_92734562	1.76009	Six3_Six1_Six2	ENSMUST00000072363.5|Kprp|ENSMUSG00000059832.5|keratinocyte expressed, proline-rich
mm39_v1_chr2_-_152382014_152382021	1.34865	Six3_Six1_Six2	ENSMUST00000060598.4|Defb29|ENSMUSG00000044249.4|defensin beta 29
mm39_v1_chr7_+_15484056_15484056	1.2529	Six3_Six1_Six2	ENSMUST00000173455.8|Obox5|ENSMUSG00000074366.10|oocyte specific homeobox 5
mm39_v1_chr16_+_22739191_22739222	1.1696	Six3_Six1_Six2	ENSMUST00000116625.10|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr16_+_22739028_22739066	1.16641	Six3_Six1_Six2	ENSMUST00000232097.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr2_-_88534814_88534941	0.939847	Six3_Six1_Six2	ENSMUST00000216928.2|Olfr1196|ENSMUSG00000075120.5|olfactory receptor 1196	ENSMUST00000216977.2|Olfr1196|ENSMUSG00000075120.5|olfactory receptor 1196
mm39_v1_chr5_+_23992689_23992749	0.90087	Six3_Six1_Six2	ENSMUST00000120869.6|Rint1|ENSMUSG00000028999.16|RAD50 interactor 1	ENSMUST00000030852.13|Rint1|ENSMUSG00000028999.16|RAD50 interactor 1	ENSMUST00000117783.8|Rint1|ENSMUSG00000028999.16|RAD50 interactor 1	ENSMUST00000115113.3|Rint1|ENSMUSG00000028999.16|RAD50 interactor 1
mm39_v1_chr7_-_5119910_5119949	0.894258	Six3_Six1_Six2	ENSMUST00000179971.8|Rfpl4|ENSMUSG00000035191.16|ret finger protein-like 4	ENSMUST00000045215.9|Rfpl4|ENSMUSG00000035191.16|ret finger protein-like 4	ENSMUST00000208468.2|Rfpl4|ENSMUSG00000035191.16|ret finger protein-like 4
mm39_v1_chr5_+_21748523_21748587	0.88969	Six3_Six1_Six2	ENSMUST00000035651.6|Lrrc17|ENSMUSG00000039883.6|leucine rich repeat containing 17
mm39_v1_chr5_+_139408906_139408941	0.876659	Six3_Six1_Six2	ENSMUST00000066211.5|Gper1|ENSMUSG00000053647.5|G protein-coupled estrogen receptor 1
mm39_v1_chr3_+_82915031_82915175	0.861376	Six3_Six1_Six2	ENSMUST00000048486.13|Fgg|ENSMUSG00000033860.14|fibrinogen gamma chain	ENSMUST00000194175.2|Fgg|ENSMUSG00000033860.14|fibrinogen gamma chain
mm39_v1_chr19_+_27194757_27194825	0.850381	Six3_Six1_Six2	ENSMUST00000047645.13|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor	ENSMUST00000167487.8|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor
mm39_v1_chr7_+_14393658_14393670	0.816414	Six3_Six1_Six2	ENSMUST00000069740.14|Obox7|ENSMUSG00000055942.14|oocyte specific homeobox 7	ENSMUST00000183424.2|Obox7|ENSMUSG00000055942.14|oocyte specific homeobox 7
mm39_v1_chr7_+_43339842_43339842	0.786846	Six3_Six1_Six2	ENSMUST00000056329.7|Klk14|ENSMUSG00000044737.7|kallikrein related-peptidase 14
mm39_v1_chr9_+_110856425_110856440	0.76987	Six3_Six1_Six2	ENSMUST00000199313.2|Ltf|ENSMUSG00000032496.8|lactotransferrin
mm39_v1_chr7_+_14393421_14393421	0.755119	Six3_Six1_Six2	ENSMUST00000183788.8|Obox7|ENSMUSG00000055942.14|oocyte specific homeobox 7
mm39_v1_chr4_-_116508842_116508877	0.721896	Six3_Six1_Six2	ENSMUST00000030455.15|Akr1a1|ENSMUSG00000028692.15|aldo-keto reductase family 1, member A1 (aldehyde reductase)
mm39_v1_chr6_+_38511758_38511807	0.667632	Six3_Six1_Six2	ENSMUST00000019833.5|Fmc1|ENSMUSG00000019689.5|formation of mitochondrial complex V assembly factor 1
mm39_v1_chr9_+_38725910_38725910	0.665437	Six3_Six1_Six2	ENSMUST00000213164.2|Olfr922|ENSMUSG00000043911.6|olfactory receptor 922
mm39_v1_chrX_-_73416869_73416955	0.66028	Six3_Six1_Six2	ENSMUST00000073067.11|Slc10a3|ENSMUSG00000032806.14|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	ENSMUST00000037967.6|Slc10a3|ENSMUSG00000032806.14|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm39_v1_chr17_-_57024660_57024710	0.623324	Six3_Six1_Six2	ENSMUST00000164907.3|Vmac|ENSMUSG00000054723.7|vimentin-type intermediate filament associated coiled-coil protein	ENSMUST00000233208.2|Vmac|ENSMUSG00000054723.7|vimentin-type intermediate filament associated coiled-coil protein
mm39_v1_chr19_-_38032006_38032049	0.598951	Six3_Six1_Six2	ENSMUST00000172095.3|Myof|ENSMUSG00000048612.17|myoferlin	ENSMUST00000041475.16|Myof|ENSMUSG00000048612.17|myoferlin
mm39_v1_chr19_-_38031774_38031866	0.556131	Six3_Six1_Six2	ENSMUST00000226068.2|Myof|ENSMUSG00000048612.17|myoferlin
mm39_v1_chr17_-_57023788_57023977	0.538085	Six3_Six1_Six2	ENSMUST00000067931.7|Vmac|ENSMUSG00000054723.7|vimentin-type intermediate filament associated coiled-coil protein
mm39_v1_chr4_-_60457902_60457959	0.525715	Six3_Six1_Six2	ENSMUST00000084548.11|Mup1|ENSMUSG00000078683.10|major urinary protein 1	ENSMUST00000103012.10|Mup1|ENSMUSG00000078683.10|major urinary protein 1	ENSMUST00000107499.4|Mup1|ENSMUSG00000078683.10|major urinary protein 1
mm39_v1_chr7_+_26250237_26250237	0.524913	Six3_Six1_Six2	ENSMUST00000122040.7|Nlrp9a|ENSMUSG00000054102.16|NLR family, pyrin domain containing 9A	ENSMUST00000117252.4|Nlrp9a|ENSMUSG00000054102.16|NLR family, pyrin domain containing 9A
mm39_v1_chr17_-_41225241_41225241	0.509316	Six3_Six1_Six2	ENSMUST00000166343.3|Glyatl3|ENSMUSG00000091043.3|glycine-N-acyltransferase-like 3
mm39_v1_chr17_+_57024759_57024819	0.508333	Six3_Six1_Six2	ENSMUST00000002452.8|Ndufa11|ENSMUSG00000002379.8|NADH:ubiquinone oxidoreductase subunit A11	ENSMUST00000233832.2|Ndufa11|ENSMUSG00000002379.8|NADH:ubiquinone oxidoreductase subunit A11	ENSMUST00000233233.2|Ndufa11|ENSMUSG00000002379.8|NADH:ubiquinone oxidoreductase subunit A11
mm39_v1_chr5_+_138805835_138805835	0.494533	Six3_Six1_Six2	ENSMUST00000179205.2|Foxl3|ENSMUSG00000094504.4|forkhead box L3
mm39_v1_chr8_+_95720864_95720929	0.490048	Six3_Six1_Six2	ENSMUST00000212141.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr13_+_94219934_94220019	0.477532	Six3_Six1_Six2	ENSMUST00000156071.2|Lhfpl2|ENSMUSG00000045312.13|lipoma HMGIC fusion partner-like 2
mm39_v1_chr14_+_58035614_58035637	0.473874	Six3_Six1_Six2	ENSMUST00000128764.9|Sap18|ENSMUSG00000021963.18|Sin3-associated polypeptide 18
mm39_v1_chr9_+_103879745_103879976	0.471353	Six3_Six1_Six2	ENSMUST00000035167.15|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)	ENSMUST00000194774.6|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)
mm39_v1_chr11_+_58707754_58707754	0.464774	Six3_Six1_Six2	ENSMUST00000082220.5|Olfr313|ENSMUSG00000070438.6|olfactory receptor 313
mm39_v1_chr19_-_55304392_55304479	0.4484	Six3_Six1_Six2	ENSMUST00000224291.2|Zdhhc6|ENSMUSG00000024982.11|zinc finger, DHHC domain containing 6	ENSMUST00000225495.2|Zdhhc6|ENSMUSG00000024982.11|zinc finger, DHHC domain containing 6	ENSMUST00000076891.7|Zdhhc6|ENSMUSG00000024982.11|zinc finger, DHHC domain containing 6	ENSMUST00000224897.2|Zdhhc6|ENSMUSG00000024982.11|zinc finger, DHHC domain containing 6
mm39_v1_chr14_+_58035640_58035675	0.439285	Six3_Six1_Six2	ENSMUST00000111269.2|Sap18|ENSMUSG00000021963.18|Sin3-associated polypeptide 18
mm39_v1_chr7_+_6470100_6470100	0.429503	Six3_Six1_Six2	ENSMUST00000207658.4|Olfr1346|ENSMUSG00000054938.8|olfactory receptor 1346	ENSMUST00000215302.3|Olfr1346|ENSMUSG00000054938.8|olfactory receptor 1346
mm39_v1_chr5_-_86780277_86780290	0.427357	Six3_Six1_Six2	ENSMUST00000116553.9|Tmprss11f|ENSMUSG00000048764.17|transmembrane protease, serine 11f
mm39_v1_chr13_-_40882417_40882421	0.421397	Six3_Six1_Six2	ENSMUST00000225180.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr4_-_106397733_106397743	0.420859	Six3_Six1_Six2	ENSMUST00000238822.2|Gm53010|ENSMUSG00000118551.2|predicted gene, 53010	ENSMUST00000239147.2|Tmem61|ENSMUSG00000085933.4|transmembrane protein 61
mm39_v1_chr4_-_144291704_144291771	0.414269	Six3_Six1_Six2	ENSMUST00000105748.2|Aadacl4fm2|ENSMUSG00000078506.2|AADACL4 family member 2
mm39_v1_chr7_+_43837629_43837660	0.41408	Six3_Six1_Six2	ENSMUST00000073713.8|Klk1b24|ENSMUSG00000063713.8|kallikrein 1-related peptidase b24
mm39_v1_chr6_-_52195663_52195696	0.414073	Six3_Six1_Six2	ENSMUST00000134367.4|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr7_-_12819142_12819142	0.41158	Six3_Six1_Six2	ENSMUST00000094829.2|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85
mm39_v1_chr9_-_121745354_121745381	0.395335	Six3_Six1_Six2	ENSMUST00000062474.5|Cyp8b1|ENSMUSG00000050445.5|cytochrome P450, family 8, subfamily b, polypeptide 1
mm39_v1_chr9_+_119170486_119170581	0.392285	Six3_Six1_Six2	ENSMUST00000175743.8|Acaa1a|ENSMUSG00000036138.17|acetyl-Coenzyme A acyltransferase 1A	ENSMUST00000176397.8|Acaa1a|ENSMUSG00000036138.17|acetyl-Coenzyme A acyltransferase 1A
mm39_v1_chr7_+_29931735_29931773	0.389941	Six3_Six1_Six2	ENSMUST00000108193.2|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I	ENSMUST00000108192.2|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I
mm39_v1_chr11_-_8989582_8989603	0.372759	Six3_Six1_Six2	ENSMUST00000043377.6|Sun3|ENSMUSG00000040985.14|Sad1 and UNC84 domain containing 3
mm39_v1_chr6_-_58449863_58449863	0.353289	Six3_Six1_Six2	ENSMUST00000226390.2|Vmn1r31|ENSMUSG00000115404.2|vomeronasal 1 receptor 31
mm39_v1_chr6_-_119925387_119925507	0.352881	Six3_Six1_Six2	ENSMUST00000162541.8|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr19_+_55304703_55304799	0.335017	Six3_Six1_Six2	ENSMUST00000225529.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000223690.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000095950.3|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A
mm39_v1_chr17_+_25352353_25352456	0.326665	Six3_Six1_Six2	ENSMUST00000162862.3|Clcn7|ENSMUSG00000036636.11|chloride channel, voltage-sensitive 7	ENSMUST00000040729.9|Clcn7|ENSMUSG00000036636.11|chloride channel, voltage-sensitive 7
mm39_v1_chr9_-_36708569_36708589	0.299404	Six3_Six1_Six2	ENSMUST00000163192.11|Ei24|ENSMUSG00000062762.18|etoposide induced 2.4 mRNA
mm39_v1_chr9_+_65048454_65048494	0.295319	Six3_Six1_Six2	ENSMUST00000034961.6|Igdcc3|ENSMUSG00000032394.7|immunoglobulin superfamily, DCC subclass, member 3	ENSMUST00000217371.2|Igdcc3|ENSMUSG00000032394.7|immunoglobulin superfamily, DCC subclass, member 3
mm39_v1_chr10_+_77891161_77891199	0.289408	Six3_Six1_Six2	ENSMUST00000131825.8|Dnmt3l|ENSMUSG00000000730.14|DNA (cytosine-5-)-methyltransferase 3-like	ENSMUST00000139539.8|Dnmt3l|ENSMUSG00000000730.14|DNA (cytosine-5-)-methyltransferase 3-like	ENSMUST00000123940.2|Dnmt3l|ENSMUSG00000000730.14|DNA (cytosine-5-)-methyltransferase 3-like
mm39_v1_chr6_+_48514578_48514667	0.288147	Six3_Six1_Six2	ENSMUST00000203011.2|Atp6v0e2|ENSMUSG00000039347.8|ATPase, H+ transporting, lysosomal V0 subunit E2
mm39_v1_chr14_+_64229914_64229955	0.277903	Six3_Six1_Six2	ENSMUST00000058229.6|Rp1l1|ENSMUSG00000046049.8|retinitis pigmentosa 1 homolog like 1
mm39_v1_chr7_-_126275529_126275604	0.271893	Six3_Six1_Six2	ENSMUST00000106372.11|Sult1a1|ENSMUSG00000030711.17|sulfotransferase family 1A, phenol-preferring, member 1	ENSMUST00000155419.3|Sult1a1|ENSMUSG00000030711.17|sulfotransferase family 1A, phenol-preferring, member 1	ENSMUST00000106373.9|Sult1a1|ENSMUSG00000030711.17|sulfotransferase family 1A, phenol-preferring, member 1
mm39_v1_chr11_-_69586347_69586538	0.2685	Six3_Six1_Six2	ENSMUST00000181261.2|Tnfsf12|ENSMUSG00000097328.8|tumor necrosis factor (ligand) superfamily, member 12
mm39_v1_chr6_+_48514518_48514549	0.264417	Six3_Six1_Six2	ENSMUST00000040361.8|Atp6v0e2|ENSMUSG00000039347.8|ATPase, H+ transporting, lysosomal V0 subunit E2
mm39_v1_chr6_-_115652831_115652925	0.262298	Six3_Six1_Six2	ENSMUST00000112949.8|Raf1|ENSMUSG00000000441.18|v-raf-leukemia viral oncogene 1
mm39_v1_chr9_+_119170360_119170477	0.253166	Six3_Six1_Six2	ENSMUST00000039784.12|Acaa1a|ENSMUSG00000036138.17|acetyl-Coenzyme A acyltransferase 1A
mm39_v1_chr7_-_48149069_48149069	0.246604	Six3_Six1_Six2	ENSMUST00000098433.5|Mrgprx2|ENSMUSG00000074109.5|MAS-related GPR, member X2
mm39_v1_chr17_-_56312555_56312597	0.236738	Six3_Six1_Six2	ENSMUST00000043785.8|Stap2|ENSMUSG00000038781.8|signal transducing adaptor family member 2
mm39_v1_chr1_-_83020201_83020201	0.23547	Six3_Six1_Six2	ENSMUST00000188323.2|Krtap28-10|ENSMUSG00000100190.2|keratin associated protein 28-10
mm39_v1_chr1_+_44158111_44158169	0.229202	Six3_Six1_Six2	ENSMUST00000155917.8|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing
mm39_v1_chr2_-_13276205_13276247	0.224418	Six3_Six1_Six2	ENSMUST00000191959.6|Rsu1|ENSMUSG00000026727.11|Ras suppressor protein 1	ENSMUST00000028059.9|Rsu1|ENSMUSG00000026727.11|Ras suppressor protein 1
mm39_v1_chr9_-_36708599_36708721	0.222951	Six3_Six1_Six2	ENSMUST00000238932.2|Ei24|ENSMUSG00000062762.18|etoposide induced 2.4 mRNA	ENSMUST00000115086.13|Ei24|ENSMUSG00000062762.18|etoposide induced 2.4 mRNA
mm39_v1_chr8_+_85558151_85558151	0.220589	Six3_Six1_Six2	ENSMUST00000036734.6|Gadd45gip1|ENSMUSG00000033751.6|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm39_v1_chr7_-_29931612_29931697	0.216389	Six3_Six1_Six2	ENSMUST00000006254.6|Tbcb|ENSMUSG00000006095.13|tubulin folding cofactor B
mm39_v1_chr9_+_38686470_38686470	0.213537	Six3_Six1_Six2	ENSMUST00000071681.4|Olfr921|ENSMUSG00000049926.6|olfactory receptor 921
mm39_v1_chrX_+_37861548_37861548	0.211077	Six3_Six1_Six2	ENSMUST00000050744.6|6030498E09Rik|ENSMUSG00000051361.8|RIKEN cDNA 6030498E09 gene
mm39_v1_chr2_-_13276074_13276159	0.200242	Six3_Six1_Six2	ENSMUST00000137670.3|Rsu1|ENSMUSG00000026727.11|Ras suppressor protein 1	ENSMUST00000114791.9|Rsu1|ENSMUSG00000026727.11|Ras suppressor protein 1
mm39_v1_chr11_+_49355873_49355879	0.197964	Six3_Six1_Six2	ENSMUST00000213674.2|Olfr1386|ENSMUSG00000108167.3|olfactory receptor 1386	ENSMUST00000204518.3|Olfr1386|ENSMUSG00000108167.3|olfactory receptor 1386
mm39_v1_chrX_-_73416824_73416856	0.196155	Six3_Six1_Six2	ENSMUST00000178691.2|Ubl4a|ENSMUSG00000015290.16|ubiquitin-like 4A	ENSMUST00000114146.8|Slc10a3|ENSMUSG00000032806.14|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm39_v1_chr14_-_75830550_75830599	0.187843	Six3_Six1_Six2	ENSMUST00000164082.9|Cby2|ENSMUSG00000034913.11|chibby family member 2	ENSMUST00000169658.9|Cby2|ENSMUSG00000034913.11|chibby family member 2
mm39_v1_chr1_+_40305738_40305843	0.1816	Six3_Six1_Six2	ENSMUST00000114795.3|Il1r1|ENSMUSG00000026072.13|interleukin 1 receptor, type I
mm39_v1_chr9_+_123921573_123921623	0.179593	Six3_Six1_Six2	ENSMUST00000111442.3|Ccr5|ENSMUSG00000079227.11|chemokine (C-C motif) receptor 5	ENSMUST00000171499.3|Ccr5|ENSMUSG00000079227.11|chemokine (C-C motif) receptor 5
mm39_v1_chr7_-_103393740_103393740	0.175301	Six3_Six1_Six2	ENSMUST00000216300.2|Olfr629|ENSMUSG00000047545.6|olfactory receptor 629
mm39_v1_chr2_+_87725306_87725306	0.175	Six3_Six1_Six2	ENSMUST00000217436.2|Olfr1153|ENSMUSG00000048197.5|olfactory receptor 1153
mm39_v1_chr16_-_18052937_18053048	0.173855	Six3_Six1_Six2	ENSMUST00000076957.7|Zdhhc8|ENSMUSG00000060166.7|zinc finger, DHHC domain containing 8
mm39_v1_chr1_+_118104272_118104272	0.172043	Six3_Six1_Six2	ENSMUST00000186264.2|Gm29106|ENSMUSG00000102030.2|predicted gene 29106
mm39_v1_chr11_+_120612369_120612399	0.167037	Six3_Six1_Six2	ENSMUST00000142229.2|Rac3|ENSMUSG00000018012.12|Rac family small GTPase 3
mm39_v1_chr7_+_29931309_29931457	0.166294	Six3_Six1_Six2	ENSMUST00000019882.16|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I	ENSMUST00000149654.8|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I
mm39_v1_chr8_-_87611849_87611935	0.165964	Six3_Six1_Six2	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr7_-_102507962_102507972	0.154651	Six3_Six1_Six2	ENSMUST00000213481.2|Olfr566|ENSMUSG00000060888.5|olfactory receptor 566	ENSMUST00000209952.2|Olfr566|ENSMUSG00000060888.5|olfactory receptor 566
mm39_v1_chr1_+_92516054_92516054	0.149945	Six3_Six1_Six2	ENSMUST00000062964.5|Olfr1412|ENSMUSG00000046300.5|olfactory receptor 1412
mm39_v1_chr9_-_35701371_35701408	0.148723	Six3_Six1_Six2	ENSMUST00000034619.2|Pate6|ENSMUSG00000032108.4|prostate and testis expressed 6
mm39_v1_chrX_-_110446022_110446039	0.137204	Six3_Six1_Six2	ENSMUST00000156639.2|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr16_-_16491881_16491881	0.137072	Six3_Six1_Six2	ENSMUST00000057886.6|Olfr19|ENSMUSG00000048101.7|olfactory receptor 19
mm39_v1_chr1_+_173959083_173959083	0.137044	Six3_Six1_Six2	ENSMUST00000214751.2|Olfr424|ENSMUSG00000051528.5|olfactory receptor 424
mm39_v1_chr2_-_85917726_85917729	0.134094	Six3_Six1_Six2	ENSMUST00000216886.2|Olfr1037|ENSMUSG00000075205.6|olfactory receptor 1037	ENSMUST00000213333.2|Olfr1037|ENSMUSG00000075205.6|olfactory receptor 1037	ENSMUST00000216020.2|Olfr1037|ENSMUSG00000075205.6|olfactory receptor 1037
mm39_v1_chr9_-_39920878_39920878	0.129029	Six3_Six1_Six2	ENSMUST00000216463.3|Olfr980|ENSMUSG00000060254.8|olfactory receptor 980
mm39_v1_chr3_-_88332401_88332446	0.128621	Six3_Six1_Six2	ENSMUST00000168755.7|Slc25a44|ENSMUSG00000050144.14|solute carrier family 25, member 44	ENSMUST00000193433.6|Slc25a44|ENSMUSG00000050144.14|solute carrier family 25, member 44	ENSMUST00000195657.6|Slc25a44|ENSMUSG00000050144.14|solute carrier family 25, member 44	ENSMUST00000057935.9|Slc25a44|ENSMUSG00000050144.14|solute carrier family 25, member 44
mm39_v1_chr16_-_23751144_23751144	0.119277	Six3_Six1_Six2	ENSMUST00000231038.2|Rtp2|ENSMUSG00000047531.10|receptor transporter protein 2
mm39_v1_chr2_-_111320501_111320501	0.112533	Six3_Six1_Six2	ENSMUST00000099616.2|Olfr1290|ENSMUSG00000095809.4|olfactory receptor 1290
mm39_v1_chr11_-_73800125_73800125	0.110947	Six3_Six1_Six2	ENSMUST00000215690.2|Olfr395|ENSMUSG00000062186.3|olfactory receptor 395
mm39_v1_chr11_+_120612278_120612362	0.10662	Six3_Six1_Six2	ENSMUST00000018156.12|Rac3|ENSMUSG00000018012.12|Rac family small GTPase 3
mm39_v1_chr6_-_120893725_120893768	0.102963	Six3_Six1_Six2	ENSMUST00000145948.2|Bid|ENSMUSG00000004446.13|BH3 interacting domain death agonist
mm39_v1_chr7_-_103420801_103420801	0.101006	Six3_Six1_Six2	ENSMUST00000106878.3|Olfr69|ENSMUSG00000058662.5|olfactory receptor 69
mm39_v1_chr19_+_46329552_46329566	0.0911469	Six3_Six1_Six2	ENSMUST00000128041.8|Mfsd13a|ENSMUSG00000025227.15|major facilitator superfamily domain containing 13a
mm39_v1_chr3_+_32760447_32760447	0.0832024	Six3_Six1_Six2	ENSMUST00000194781.6|Actl6a|ENSMUSG00000027671.15|actin-like 6A
mm39_v1_chr7_-_102368277_102368277	0.0784043	Six3_Six1_Six2	ENSMUST00000216312.2|Olfr33|ENSMUSG00000066273.7|olfactory receptor 33
mm39_v1_chr16_-_58647137_58647145	0.0743464	Six3_Six1_Six2	ENSMUST00000215069.2|Olfr175|ENSMUSG00000060663.7|olfactory receptor 175	ENSMUST00000079955.6|Olfr175|ENSMUSG00000060663.7|olfactory receptor 175
mm39_v1_chr7_+_102965522_102965522	0.070898	Six3_Six1_Six2	ENSMUST00000216456.2|Olfr597|ENSMUSG00000073952.6|olfactory receptor 597
mm39_v1_chr6_+_17743581_17743592	0.0707055	Six3_Six1_Six2	ENSMUST00000000674.13|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7	ENSMUST00000077080.9|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7
mm39_v1_chr4_-_106588122_106588168	0.0565677	Six3_Six1_Six2	ENSMUST00000148281.2|Mroh7|ENSMUSG00000047502.15|maestro heat-like repeat family member 7
mm39_v1_chr15_+_38662158_38662240	0.056163	Six3_Six1_Six2	ENSMUST00000022904.8|Atp6v1c1|ENSMUSG00000022295.9|ATPase, H+ transporting, lysosomal V1 subunit C1	ENSMUST00000228820.2|Atp6v1c1|ENSMUSG00000022295.9|ATPase, H+ transporting, lysosomal V1 subunit C1
mm39_v1_chrX_+_30768610_30768610	0.0540527	Six3_Six1_Six2	ENSMUST00000179532.2|Btbd35f29|ENSMUSG00000094391.2|BTB domain containing 35, family member 29
mm39_v1_chr6_-_57306479_57306479	0.0512772	Six3_Six1_Six2	ENSMUST00000227283.2|Vmn1r16|ENSMUSG00000115792.2|vomeronasal 1 receptor 16	ENSMUST00000228356.2|Vmn1r16|ENSMUSG00000115792.2|vomeronasal 1 receptor 16
mm39_v1_chr6_-_120893771_120893829	0.0476829	Six3_Six1_Six2	ENSMUST00000004560.12|Bid|ENSMUSG00000004446.13|BH3 interacting domain death agonist
mm39_v1_chrX_+_23748792_23748792	0.0401108	Six3_Six1_Six2	ENSMUST00000116614.3|Tesl1|ENSMUSG00000068113.7|testin LIM domain protein like 1
mm39_v1_chr10_-_12744025_12744047	0.0388765	Six3_Six1_Six2	ENSMUST00000219660.2|Utrn|ENSMUSG00000019820.12|utrophin
mm39_v1_chr13_-_74440402_74440462	0.0387288	Six3_Six1_Six2	ENSMUST00000109640.8|Ahrr|ENSMUSG00000021575.17|aryl-hydrocarbon receptor repressor	ENSMUST00000022059.14|Ahrr|ENSMUSG00000021575.17|aryl-hydrocarbon receptor repressor
mm39_v1_chr2_-_76698725_76698736	0.0378247	Six3_Six1_Six2	ENSMUST00000149616.8|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000152185.8|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000130915.8|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000155365.8|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000128071.8|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr15_-_103218876_103219039	0.0343433	Six3_Six1_Six2	ENSMUST00000079824.6|Gpr84|ENSMUSG00000063234.6|G protein-coupled receptor 84
mm39_v1_chr17_+_56312672_56312712	0.0328923	Six3_Six1_Six2	ENSMUST00000133998.8|Mpnd|ENSMUSG00000003199.17|MPN domain containing
mm39_v1_chrX_-_31034822_31034822	0.032297	Six3_Six1_Six2	ENSMUST00000238426.2|Btbd35f19|ENSMUSG00000118465.2|BTB domain containing 35, family member 19
mm39_v1_chrX_-_33139812_33139812	0.0320636	Six3_Six1_Six2	ENSMUST00000105117.3|Btbd35f14|ENSMUSG00000078324.3|BTB domain containing 35, family member 14
mm39_v1_chrX_+_33094635_33094635	0.0308453	Six3_Six1_Six2	ENSMUST00000177912.2|Btbd35f13|ENSMUSG00000095934.2|BTB domain containing 35, family member 13
mm39_v1_chrX_-_33014777_33014777	0.029244	Six3_Six1_Six2	ENSMUST00000186329.2|Btbd35f15|ENSMUSG00000101294.2|BTB domain containing 35, family member 15
mm39_v1_chrY_-_40731110_40731110	0.0251538	Six3_Six1_Six2	ENSMUST00000177579.2|Gm21797|ENSMUSG00000096885.2|predicted gene, 21797
mm39_v1_chrX_+_4703838_4703838	0.0225479	Six3_Six1_Six2	ENSMUST00000105011.4|Btbd35f4|ENSMUSG00000078213.4|BTB domain containing 35, family member 4
mm39_v1_chrY_+_41361843_41361843	0.0209587	Six3_Six1_Six2	ENSMUST00000178559.2|Gm21800|ENSMUSG00000096120.2|predicted gene, 21800
mm39_v1_chrX_+_31608531_31608531	0.0193206	Six3_Six1_Six2	ENSMUST00000238528.2|Btbd35f22|ENSMUSG00000118402.2|BTB domain containing 35, family member 22
mm39_v1_chrX_+_32750842_32750842	0.0183319	Six3_Six1_Six2	ENSMUST00000178827.3|Btbd35f12|ENSMUSG00000101500.2|BTB domain containing 35, family member 12
mm39_v1_chr19_+_9824919_9824926	0.0151468	Six3_Six1_Six2	ENSMUST00000179814.3|Scgb2a2|ENSMUSG00000096872.3|secretoglobin, family 2A, member 2
mm39_v1_chrX_+_32411401_32411401	0.0147098	Six3_Six1_Six2	ENSMUST00000178747.3|Btbd35f5|ENSMUSG00000118409.2|BTB domain containing 35, family member 5
mm39_v1_chrX_-_33394003_33394003	0.0138381	Six3_Six1_Six2	ENSMUST00000179466.2|Btbd35f6|ENSMUSG00000096915.2|BTB domain containing 35, family member 6
mm39_v1_chrY_+_13941738_13941738	0.0136693	Six3_Six1_Six2	ENSMUST00000178689.2|Gm21767|ENSMUSG00000094227.2|predicted gene, 21767
mm39_v1_chrY_+_18654482_18654482	0.0136693	Six3_Six1_Six2	ENSMUST00000179302.2|Gm21822|ENSMUSG00000095927.2|predicted gene, 21822
mm39_v1_chrX_+_31839202_31839202	0.00955152	Six3_Six1_Six2	ENSMUST00000179991.3|Btbd35f2|ENSMUSG00000096194.3|BTB domain containing 35, family member 2
mm39_v1_chr16_-_11021116_11021195	0.00947072	Six3_Six1_Six2	ENSMUST00000230002.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1	ENSMUST00000119953.2|Rsl1d1|ENSMUSG00000005846.13|ribosomal L1 domain containing 1
mm39_v1_chr8_+_72704882_72704975	0.00841232	Six3_Six1_Six2	ENSMUST00000131237.8|Zfp961|ENSMUSG00000052446.18|zinc finger protein 961	ENSMUST00000136516.9|Zfp961|ENSMUSG00000052446.18|zinc finger protein 961	ENSMUST00000109997.10|Zfp961|ENSMUSG00000052446.18|zinc finger protein 961	ENSMUST00000132848.2|Zfp961|ENSMUSG00000052446.18|zinc finger protein 961
mm39_v1_chrX_+_168468186_168468246	0.00771169	Six3_Six1_Six2	ENSMUST00000112107.8|Mid1|ENSMUSG00000035299.17|midline 1	ENSMUST00000112104.8|Mid1|ENSMUSG00000035299.17|midline 1
mm39_v1_chrY_-_13465579_13465579	0.0071509	Six3_Six1_Six2	ENSMUST00000178428.2|Gm21866|ENSMUSG00000093883.2|predicted gene, 21866
mm39_v1_chrX_-_153673263_153673310	0.00667456	Six3_Six1_Six2	ENSMUST00000096852.5|Cldn34b1|ENSMUSG00000072100.5|claudin 34B1
mm39_v1_chr9_+_72866067_72866147	0.00501841	Six3_Six1_Six2	ENSMUST00000098567.9|Dnaaf4|ENSMUSG00000092192.8|dynein axonemal assembly factor 4	ENSMUST00000034734.9|Dnaaf4|ENSMUSG00000092192.8|dynein axonemal assembly factor 4
mm39_v1_chr14_+_123897383_123897621	0.00258581	Six3_Six1_Six2	ENSMUST00000049681.14|Itgbl1|ENSMUSG00000032925.17|integrin, beta-like 1
mm39_v1_chrX_+_32070863_32070863	0.00099686	Six3_Six1_Six2	ENSMUST00000238237.2|Btbd35f1|ENSMUSG00000118459.2|BTB domain containing 35, family member 1
mm39_v1_chrX_-_90826588_90826624	0.000534462	Six3_Six1_Six2	ENSMUST00000082048.3|Mageb5|ENSMUSG00000061392.3|MAGE family member B5
