mm39_v1_chr17_+_34482183_34482230	7.71426	Sox1	ENSMUST00000040828.7|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237342.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237866.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1
mm39_v1_chr17_-_34506744_34506804	7.23253	Sox1	ENSMUST00000174751.2|H2-Aa|ENSMUSG00000036594.16|histocompatibility 2, class II antigen A, alpha	ENSMUST00000040655.14|H2-Aa|ENSMUSG00000036594.16|histocompatibility 2, class II antigen A, alpha
mm39_v1_chr14_+_65903840_65903865	3.41894	Sox1	ENSMUST00000022610.15|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr1_-_173703424_173703430	3.3575	Sox1	ENSMUST00000186442.7|Mndal|ENSMUSG00000090272.10|myeloid nuclear differentiation antigen like
mm39_v1_chr9_-_114219685_114219755	3.19343	Sox1	ENSMUST00000084881.5|Crtap|ENSMUSG00000032431.7|cartilage associated protein
mm39_v1_chr17_+_48047955_48048033	2.72624	Sox1	ENSMUST00000086932.10|Tfeb|ENSMUSG00000023990.19|transcription factor EB
mm39_v1_chr2_+_84629172_84629214	2.70288	Sox1	ENSMUST00000102642.9|Ube2l6|ENSMUSG00000027078.15|ubiquitin-conjugating enzyme E2L 6	ENSMUST00000150325.2|Ube2l6|ENSMUSG00000027078.15|ubiquitin-conjugating enzyme E2L 6
mm39_v1_chr6_+_37507108_37507133	2.55814	Sox1	ENSMUST00000040987.11|Akr1d1|ENSMUSG00000038641.13|aldo-keto reductase family 1, member D1
mm39_v1_chr15_-_74869483_74869483	2.51371	Sox1	ENSMUST00000023248.13|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A
mm39_v1_chr15_-_74869684_74869880	2.14206	Sox1	ENSMUST00000190188.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000189068.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000186526.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187171.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187994.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A
mm39_v1_chr14_+_65903878_65903892	2.12999	Sox1	ENSMUST00000069226.7|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr5_+_21391282_21391339	2.11229	Sox1	ENSMUST00000036031.13|Gsap|ENSMUSG00000039934.13|gamma-secretase activating protein	ENSMUST00000198937.2|Gsap|ENSMUSG00000039934.13|gamma-secretase activating protein
mm39_v1_chr6_-_52195663_52195696	2.08737	Sox1	ENSMUST00000134367.4|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr1_+_171723231_171723231	1.90129	Sox1	ENSMUST00000097466.3|Gm10521|ENSMUSG00000073492.3|predicted gene 10521
mm39_v1_chr4_-_131664478_131664526	1.84554	Sox1	ENSMUST00000155990.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr7_+_67305162_67305195	1.79089	Sox1	ENSMUST00000107470.2|Ttc23|ENSMUSG00000030555.17|tetratricopeptide repeat domain 23
mm39_v1_chr2_-_84481101_84481115	1.73889	Sox1	ENSMUST00000111691.2|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr14_-_56339915_56340031	1.57926	Sox1	ENSMUST00000015583.2|Ctsg|ENSMUSG00000040314.3|cathepsin G
mm39_v1_chr2_-_84481058_84481093	1.54174	Sox1	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr19_+_18818001_18818013	1.53252	Sox1	ENSMUST00000237020.2|Trpm6|ENSMUSG00000024727.10|transient receptor potential cation channel, subfamily M, member 6
mm39_v1_chr11_-_69768875_69768883	1.48813	Sox1	ENSMUST00000178597.3|Tmem95|ENSMUSG00000094845.3|transmembrane protein 95
mm39_v1_chr1_-_194813843_194813895	1.4186	Sox1	ENSMUST00000075451.12|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like	ENSMUST00000191775.2|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like
mm39_v1_chr19_-_8382424_8382475	1.39756	Sox1	ENSMUST00000064507.12|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30	ENSMUST00000120540.2|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30	ENSMUST00000096269.11|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30
mm39_v1_chr11_+_96024612_96024612	1.36321	Sox1	ENSMUST00000167258.8|Ttll6|ENSMUSG00000038756.14|tubulin tyrosine ligase-like family, member 6
mm39_v1_chrX_+_100473161_100473315	1.30083	Sox1	ENSMUST00000033673.7|Nono|ENSMUSG00000031311.18|non-POU-domain-containing, octamer binding protein
mm39_v1_chr13_+_42454922_42454967	1.14295	Sox1	ENSMUST00000021796.9|Edn1|ENSMUSG00000021367.9|endothelin 1
mm39_v1_chr12_+_52144511_52144557	1.13183	Sox1	ENSMUST00000040090.16|Nubpl|ENSMUSG00000035142.19|nucleotide binding protein-like
mm39_v1_chr7_+_119289249_119289249	1.04684	Sox1	ENSMUST00000047045.10|Acsm4|ENSMUSG00000047026.10|acyl-CoA synthetase medium-chain family member 4
mm39_v1_chr1_-_194813631_194813715	0.940657	Sox1	ENSMUST00000194111.6|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like	ENSMUST00000193094.6|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like
mm39_v1_chr9_+_44238089_44238168	0.882856	Sox1	ENSMUST00000054708.5|Dpagt1|ENSMUSG00000032123.6|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm39_v1_chr3_+_90497554_90497554	0.818835	Sox1	ENSMUST00000179550.2|S100a2|ENSMUSG00000094018.3|S100 calcium binding protein A2
mm39_v1_chr3_+_60503051_60503132	0.807915	Sox1	ENSMUST00000192757.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000193518.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000195817.3|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr6_+_70170212_70170212	0.738384	Sox1	ENSMUST00000103382.2|Igkv8-26|ENSMUSG00000076581.2|immunoglobulin kappa variable 8-26
mm39_v1_chr6_+_70332836_70332836	0.736397	Sox1	ENSMUST00000103390.3|Igkv8-18|ENSMUSG00000076589.3|immunoglobulin kappa variable 8-18
mm39_v1_chr9_+_123596276_123596306	0.723072	Sox1	ENSMUST00000166236.9|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9	ENSMUST00000111454.4|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9	ENSMUST00000168910.2|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9
mm39_v1_chr8_-_89362745_89362760	0.71457	Sox1	ENSMUST00000034087.9|Snx20|ENSMUSG00000031662.9|sorting nexin 20
mm39_v1_chr2_+_87185159_87185159	0.652064	Sox1	ENSMUST00000215163.3|Olfr1120|ENSMUSG00000081234.4|olfactory receptor 1120
mm39_v1_chr15_-_74920518_74920690	0.621003	Sox1	ENSMUST00000185372.2|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000187347.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000188845.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000185200.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000179762.8|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000191216.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000065408.16|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1
mm39_v1_chr11_+_73244561_73244561	0.56619	Sox1	ENSMUST00000108465.4|Olfr20|ENSMUSG00000062128.9|olfactory receptor 20
mm39_v1_chrX_+_162945162_162945189	0.545064	Sox1	ENSMUST00000131543.2|Ace2|ENSMUSG00000015405.16|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm39_v1_chr7_+_13357892_13357907	0.543717	Sox1	ENSMUST00000108525.4|Sult2a5|ENSMUSG00000078799.6|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 5
mm39_v1_chr4_-_120604445_120604602	0.528807	Sox1	ENSMUST00000030376.8|Kcnq4|ENSMUSG00000028631.8|potassium voltage-gated channel, subfamily Q, member 4
mm39_v1_chr5_+_21942139_21942177	0.513413	Sox1	ENSMUST00000030882.12|Pmpcb|ENSMUSG00000029017.14|peptidase (mitochondrial processing) beta
mm39_v1_chr11_+_96025045_96025045	0.481546	Sox1	ENSMUST00000107680.2|Ttll6|ENSMUSG00000038756.14|tubulin tyrosine ligase-like family, member 6
mm39_v1_chr14_+_54032814_54032814	0.466268	Sox1	ENSMUST00000103671.4|Trav13-5|ENSMUSG00000087666.4|T cell receptor alpha variable 13-5
mm39_v1_chr7_+_103620359_103620359	0.454124	Sox1	ENSMUST00000209473.4|Olfr635|ENSMUSG00000094520.5|olfactory receptor 635
mm39_v1_chr7_+_79992839_79992910	0.442464	Sox1	ENSMUST00000032747.7|Hddc3|ENSMUSG00000030532.7|HD domain containing 3	ENSMUST00000206480.2|Hddc3|ENSMUSG00000030532.7|HD domain containing 3	ENSMUST00000206074.2|Hddc3|ENSMUSG00000030532.7|HD domain containing 3	ENSMUST00000206122.2|Hddc3|ENSMUSG00000030532.7|HD domain containing 3
mm39_v1_chr9_+_123921573_123921623	0.428577	Sox1	ENSMUST00000111442.3|Ccr5|ENSMUSG00000079227.11|chemokine (C-C motif) receptor 5	ENSMUST00000171499.3|Ccr5|ENSMUSG00000079227.11|chemokine (C-C motif) receptor 5
mm39_v1_chr2_-_34645241_34645268	0.422621	Sox1	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr3_+_32490300_32490300	0.403582	Sox1	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr9_-_108183140_108183158	0.401894	Sox1	ENSMUST00000195615.2|Tcta|ENSMUSG00000039461.13|T cell leukemia translocation altered gene
mm39_v1_chr16_-_37474772_37474829	0.38567	Sox1	ENSMUST00000023514.4|Ndufb4|ENSMUSG00000022820.5|NADH:ubiquinone oxidoreductase subunit B4
mm39_v1_chr4_+_63478478_63478597	0.369294	Sox1	ENSMUST00000080336.4|Tmem268|ENSMUSG00000045917.18|transmembrane protein 268
mm39_v1_chr2_+_87726521_87726521	0.368046	Sox1	ENSMUST00000052300.2|Olfr1153|ENSMUSG00000048197.5|olfactory receptor 1153
mm39_v1_chr5_-_82272549_82272571	0.360367	Sox1	ENSMUST00000188072.2|1700031L13Rik|ENSMUSG00000099863.2|RIKEN cDNA 1700031L13 gene	ENSMUST00000185410.2|1700031L13Rik|ENSMUSG00000099863.2|RIKEN cDNA 1700031L13 gene
mm39_v1_chr17_+_35188888_35188888	0.338142	Sox1	ENSMUST00000173680.2|Gm20481|ENSMUSG00000092609.2|predicted gene 20481
mm39_v1_chr17_-_21134625_21134625	0.212461	Sox1	ENSMUST00000077001.3|Vmn1r232|ENSMUSG00000062165.4|vomeronasal 1 receptor 232
mm39_v1_chr14_-_35533922_35533955	0.19849	Sox1	ENSMUST00000043266.7|4930596D02Rik|ENSMUSG00000041068.7|RIKEN cDNA 4930596D02 gene
mm39_v1_chr2_+_34296783_34296892	0.187578	Sox1	ENSMUST00000149383.8|Mapkap1|ENSMUSG00000038696.15|mitogen-activated protein kinase associated protein 1	ENSMUST00000124443.8|Mapkap1|ENSMUSG00000038696.15|mitogen-activated protein kinase associated protein 1	ENSMUST00000141253.2|Mapkap1|ENSMUSG00000038696.15|mitogen-activated protein kinase associated protein 1	ENSMUST00000113124.8|Mapkap1|ENSMUSG00000038696.15|mitogen-activated protein kinase associated protein 1
mm39_v1_chr7_-_119744509_119744515	0.172332	Sox1	ENSMUST00000208874.2|Zp2|ENSMUSG00000030911.8|zona pellucida glycoprotein 2	ENSMUST00000033207.6|Zp2|ENSMUSG00000030911.8|zona pellucida glycoprotein 2
mm39_v1_chr6_-_66757618_66757618	0.169413	Sox1	ENSMUST00000227493.2|Vmn1r38|ENSMUSG00000115170.2|vomeronasal 1 receptor 38
mm39_v1_chr8_+_13209141_13209161	0.161691	Sox1	ENSMUST00000033824.8|Lamp1|ENSMUSG00000031447.8|lysosomal-associated membrane protein 1
mm39_v1_chr6_+_121160626_121160901	0.128137	Sox1	ENSMUST00000118234.8|Pex26|ENSMUSG00000067825.12|peroxisomal biogenesis factor 26	ENSMUST00000088561.10|Pex26|ENSMUSG00000067825.12|peroxisomal biogenesis factor 26	ENSMUST00000137432.8|Pex26|ENSMUSG00000067825.12|peroxisomal biogenesis factor 26	ENSMUST00000120066.8|Pex26|ENSMUSG00000067825.12|peroxisomal biogenesis factor 26
mm39_v1_chr2_+_88644840_88644840	0.112681	Sox1	ENSMUST00000214703.2|Olfr1202|ENSMUSG00000064084.3|olfactory receptor 1202
mm39_v1_chr11_+_49355873_49355879	0.108835	Sox1	ENSMUST00000213674.2|Olfr1386|ENSMUSG00000108167.3|olfactory receptor 1386	ENSMUST00000204518.3|Olfr1386|ENSMUSG00000108167.3|olfactory receptor 1386
mm39_v1_chr18_-_70409277_70409371	0.0826257	Sox1	ENSMUST00000239144.2|Gm36255|ENSMUSG00000118497.2|predicted gene, 36255
mm39_v1_chr7_-_103710652_103710652	0.0465202	Sox1	ENSMUST00000074064.5|4930516K23Rik|ENSMUSG00000090219.4|RIKEN cDNA 4930516K23 gene
mm39_v1_chr6_+_114625771_114625851	0.0389701	Sox1	ENSMUST00000182510.8|Atg7|ENSMUSG00000030314.17|autophagy related 7
