mm39_v1_chr12_+_112586465_112586491	5.96747	Sp2	ENSMUST00000021726.8|Adssl1|ENSMUSG00000011148.15|adenylosuccinate synthetase like 1
mm39_v1_chr1_+_183766572_183766583	5.58084	Sp2	ENSMUST00000048655.8|Dusp10|ENSMUSG00000039384.9|dual specificity phosphatase 10
mm39_v1_chr12_+_112586501_112586527	5.38171	Sp2	ENSMUST00000180015.9|Adssl1|ENSMUSG00000011148.15|adenylosuccinate synthetase like 1
mm39_v1_chr1_-_172047282_172047443	5.09554	Sp2	ENSMUST00000170700.2|Casq1|ENSMUSG00000007122.12|calsequestrin 1	ENSMUST00000003554.11|Casq1|ENSMUSG00000007122.12|calsequestrin 1
mm39_v1_chr1_-_183766195_183766213	5.01974	Sp2	ENSMUST00000050306.8|1700056E22Rik|ENSMUSG00000044854.8|RIKEN cDNA 1700056E22 gene
mm39_v1_chr7_+_19016536_19016628	3.30082	Sp2	ENSMUST00000032559.17|Rtn2|ENSMUSG00000030401.17|reticulon 2 (Z-band associated protein)
mm39_v1_chr14_-_20706556_20706608	2.85346	Sp2	ENSMUST00000090469.8|Myoz1|ENSMUSG00000068697.8|myozenin 1
mm39_v1_chr7_-_29979758_29979851	2.80045	Sp2	ENSMUST00000108190.8|Wdr62|ENSMUSG00000037020.17|WD repeat domain 62
mm39_v1_chr7_-_99276310_99276310	2.7861	Sp2	ENSMUST00000178124.3|Tpbgl|ENSMUSG00000096606.3|trophoblast glycoprotein-like
mm39_v1_chr10_-_84938350_84938413	2.66107	Sp2	ENSMUST00000059383.8|Fhl4|ENSMUSG00000050035.8|four and a half LIM domains 4	ENSMUST00000216889.2|Fhl4|ENSMUSG00000050035.8|four and a half LIM domains 4
mm39_v1_chr6_-_82751429_82751444	2.39262	Sp2	ENSMUST00000000642.11|Hk2|ENSMUSG00000000628.11|hexokinase 2
mm39_v1_chr1_-_80318197_80318229	2.35425	Sp2	ENSMUST00000163119.8|Cul3|ENSMUSG00000004364.15|cullin 3
mm39_v1_chrX_+_149330371_149330455	2.30744	Sp2	ENSMUST00000066337.13|Alas2|ENSMUSG00000025270.14|aminolevulinic acid synthase 2, erythroid	ENSMUST00000112715.2|Alas2|ENSMUSG00000025270.14|aminolevulinic acid synthase 2, erythroid
mm39_v1_chr4_-_41045381_41045448	2.25359	Sp2	ENSMUST00000054945.8|Aqp7|ENSMUSG00000028427.14|aquaporin 7
mm39_v1_chr7_-_24569130_24569215	2.23182	Sp2	ENSMUST00000122995.2|Lypd4|ENSMUSG00000062732.11|Ly6/Plaur domain containing 4
mm39_v1_chr16_+_4964849_4964973	2.21666	Sp2	ENSMUST00000165810.2|Sec14l5|ENSMUSG00000091712.3|SEC14-like lipid binding 5	ENSMUST00000230616.2|Sec14l5|ENSMUSG00000091712.3|SEC14-like lipid binding 5
mm39_v1_chr18_-_35788255_35788293	2.2087	Sp2	ENSMUST00000190196.5|Prob1|ENSMUSG00000073600.6|proline rich basic protein 1
mm39_v1_chr11_-_69496655_69496797	2.12533	Sp2	ENSMUST00000047889.13|Atp1b2|ENSMUSG00000041329.14|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm39_v1_chr2_+_119181703_119181716	2.11783	Sp2	ENSMUST00000028780.4|Chac1|ENSMUSG00000027313.4|ChaC, cation transport regulator 1
mm39_v1_chr1_+_135980508_135980533	2.09206	Sp2	ENSMUST00000112068.10|Cacna1s|ENSMUSG00000026407.18|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm39_v1_chr1_+_135980488_135980499	2.06397	Sp2	ENSMUST00000160641.8|Cacna1s|ENSMUSG00000026407.18|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm39_v1_chr3_-_107366868_107366868	1.97952	Sp2	ENSMUST00000009617.10|Kcnc4|ENSMUSG00000027895.11|potassium voltage gated channel, Shaw-related subfamily, member 4	ENSMUST00000238670.2|Kcnc4|ENSMUSG00000027895.11|potassium voltage gated channel, Shaw-related subfamily, member 4
mm39_v1_chr16_-_10603389_10603407	1.97323	Sp2	ENSMUST00000229866.2|Socs1|ENSMUSG00000038037.6|suppressor of cytokine signaling 1	ENSMUST00000038099.6|Socs1|ENSMUSG00000038037.6|suppressor of cytokine signaling 1
mm39_v1_chr9_-_32255604_32255648	1.90289	Sp2	ENSMUST00000034533.7|Kcnj5|ENSMUSG00000032034.7|potassium inwardly-rectifying channel, subfamily J, member 5
mm39_v1_chr18_-_35795175_35795228	1.89836	Sp2	ENSMUST00000236574.2|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24	ENSMUST00000236971.2|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24
mm39_v1_chr9_-_24685572_24685599	1.89787	Sp2	ENSMUST00000052946.12|Tbx20|ENSMUSG00000031965.16|T-box 20	ENSMUST00000166018.4|Tbx20|ENSMUSG00000031965.16|T-box 20
mm39_v1_chr6_+_120643323_120643386	1.89152	Sp2	ENSMUST00000112686.8|Cecr2|ENSMUSG00000071226.12|CECR2, histone acetyl-lysine reader
mm39_v1_chr12_-_36206780_36206824	1.85936	Sp2	ENSMUST00000223382.2|Bzw2|ENSMUSG00000020547.6|basic leucine zipper and W2 domains 2	ENSMUST00000020856.6|Bzw2|ENSMUSG00000020547.6|basic leucine zipper and W2 domains 2
mm39_v1_chr18_-_35788240_35788252	1.77615	Sp2	ENSMUST00000097619.2|Prob1|ENSMUSG00000073600.6|proline rich basic protein 1
mm39_v1_chr11_-_68864666_68864690	1.74856	Sp2	ENSMUST00000038644.5|Rangrf|ENSMUSG00000032892.15|RAN guanine nucleotide release factor
mm39_v1_chr9_-_32255556_32255589	1.73765	Sp2	ENSMUST00000214223.2|Kcnj5|ENSMUSG00000032034.7|potassium inwardly-rectifying channel, subfamily J, member 5
mm39_v1_chr7_-_45546081_45546138	1.73252	Sp2	ENSMUST00000120299.4|Syngr4|ENSMUSG00000040231.17|synaptogyrin 4	ENSMUST00000039049.16|Syngr4|ENSMUSG00000040231.17|synaptogyrin 4
mm39_v1_chr13_+_35925296_35925368	1.73089	Sp2	ENSMUST00000163595.3|Cdyl|ENSMUSG00000059288.15|chromodomain protein, Y chromosome-like
mm39_v1_chr14_-_20844074_20844166	1.7251	Sp2	ENSMUST00000080440.14|Camk2g|ENSMUSG00000021820.19|calcium/calmodulin-dependent protein kinase II gamma	ENSMUST00000100837.11|Camk2g|ENSMUSG00000021820.19|calcium/calmodulin-dependent protein kinase II gamma	ENSMUST00000071816.7|Camk2g|ENSMUSG00000021820.19|calcium/calmodulin-dependent protein kinase II gamma
mm39_v1_chr9_-_21202353_21202476	1.68919	Sp2	ENSMUST00000086374.8|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr18_-_35795233_35795255	1.66477	Sp2	ENSMUST00000025209.12|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24	ENSMUST00000096573.4|Spata24|ENSMUSG00000024352.13|spermatogenesis associated 24
mm39_v1_chr5_+_92750898_92750918	1.63689	Sp2	ENSMUST00000200941.2|Stbd1|ENSMUSG00000047963.8|starch binding domain 1	ENSMUST00000050952.4|Stbd1|ENSMUSG00000047963.8|starch binding domain 1
mm39_v1_chr15_-_58695379_58695430	1.63408	Sp2	ENSMUST00000072113.6|Tmem65|ENSMUSG00000062373.9|transmembrane protein 65
mm39_v1_chr7_+_24569472_24569487	1.62966	Sp2	ENSMUST00000011493.6|Dmrtc2|ENSMUSG00000011349.6|doublesex and mab-3 related transcription factor like family C2
mm39_v1_chr7_-_97228589_97228709	1.57111	Sp2	ENSMUST00000151840.2|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000135998.8|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000144858.8|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000146605.8|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000072725.12|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000138060.3|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000154853.8|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000136757.8|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing	ENSMUST00000124552.3|Aamdc|ENSMUSG00000035642.17|adipogenesis associated Mth938 domain containing
mm39_v1_chr11_-_116472272_116472298	1.51966	Sp2	ENSMUST00000082152.5|Ube2o|ENSMUSG00000020802.9|ubiquitin-conjugating enzyme E2O
mm39_v1_chr7_-_142211203_142211233	1.51341	Sp2	ENSMUST00000097936.9|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2	ENSMUST00000000033.12|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr12_-_110945415_110945474	1.50408	Sp2	ENSMUST00000135131.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000043459.13|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000128353.8|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr5_-_24745970_24745981	1.49068	Sp2	ENSMUST00000117900.8|Asb10|ENSMUSG00000038204.14|ankyrin repeat and SOCS box-containing 10
mm39_v1_chr17_-_29768531_29768575	1.49	Sp2	ENSMUST00000168339.3|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217	ENSMUST00000114683.10|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217	ENSMUST00000234620.2|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217
mm39_v1_chr19_-_5475002_5475027	1.46676	Sp2	ENSMUST00000025853.16|Drap1|ENSMUSG00000024914.17|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm39_v1_chr19_+_44994905_44994997	1.45477	Sp2	ENSMUST00000026227.3|Twnk|ENSMUSG00000025209.6|twinkle mtDNA helicase
mm39_v1_chr19_-_5474934_5475001	1.45252	Sp2	ENSMUST00000113674.8|Drap1|ENSMUSG00000024914.17|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm39_v1_chr15_-_63869818_63869905	1.44459	Sp2	ENSMUST00000164532.3|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B
mm39_v1_chr9_-_14411778_14411822	1.44133	Sp2	ENSMUST00000058796.7|Kdm4d|ENSMUSG00000053914.10|lysine (K)-specific demethylase 4D
mm39_v1_chr11_+_78085560_78085586	1.42213	Sp2	ENSMUST00000108317.3|Proca1|ENSMUSG00000044122.16|protein interacting with cyclin A1
mm39_v1_chr8_+_106554353_106554401	1.41784	Sp2	ENSMUST00000212566.2|Tsnaxip1|ENSMUSG00000031893.8|translin-associated factor X (Tsnax) interacting protein 1	ENSMUST00000034365.5|Tsnaxip1|ENSMUSG00000031893.8|translin-associated factor X (Tsnax) interacting protein 1
mm39_v1_chr13_+_83672654_83672682	1.40868	Sp2	ENSMUST00000199019.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr7_+_45084300_45084314	1.39969	Sp2	ENSMUST00000211150.2|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr7_+_45084257_45084295	1.39967	Sp2	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr11_+_78085522_78085533	1.39671	Sp2	ENSMUST00000060539.13|Proca1|ENSMUSG00000044122.16|protein interacting with cyclin A1
mm39_v1_chr17_-_29768586_29768645	1.39364	Sp2	ENSMUST00000234305.2|Gm17657|ENSMUSG00000091614.3|predicted gene, 17657	ENSMUST00000234648.2|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217	ENSMUST00000234979.2|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217
mm39_v1_chr9_-_66826928_66826992	1.39011	Sp2	ENSMUST00000041139.9|Rab8b|ENSMUSG00000036943.10|RAB8B, member RAS oncogene family
mm39_v1_chr13_+_83672708_83672762	1.38172	Sp2	ENSMUST00000199105.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr10_-_80165257_80165332	1.3703	Sp2	ENSMUST00000020340.15|Pcsk4|ENSMUSG00000020131.15|proprotein convertase subtilisin/kexin type 4
mm39_v1_chr19_-_5474787_5474839	1.35768	Sp2	ENSMUST00000148219.9|Drap1|ENSMUSG00000024914.17|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm39_v1_chr19_-_5474509_5474592	1.34323	Sp2	ENSMUST00000136579.3|Drap1|ENSMUSG00000024914.17|Dr1 associated protein 1 (negative cofactor 2 alpha)	ENSMUST00000113673.9|Drap1|ENSMUSG00000024914.17|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm39_v1_chr19_-_44994824_44994889	1.33986	Sp2	ENSMUST00000097715.4|Mrpl43|ENSMUSG00000025208.10|mitochondrial ribosomal protein L43
mm39_v1_chrX_+_106860083_106860178	1.33632	Sp2	ENSMUST00000143975.8|Tent5d|ENSMUSG00000073007.11|terminal nucleotidyltransferase 5D	ENSMUST00000144695.8|Tent5d|ENSMUSG00000073007.11|terminal nucleotidyltransferase 5D	ENSMUST00000167154.2|Tent5d|ENSMUSG00000073007.11|terminal nucleotidyltransferase 5D
mm39_v1_chr17_+_35201074_35201127	1.33569	Sp2	ENSMUST00000007266.14|Lsm2|ENSMUSG00000007050.18|LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr12_-_110945376_110945390	1.3317	Sp2	ENSMUST00000142012.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr1_-_155617773_155617790	1.32989	Sp2	ENSMUST00000027740.14|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr11_-_88609048_88609136	1.32635	Sp2	ENSMUST00000107909.8|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr9_-_48747232_48747262	1.31848	Sp2	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr19_-_53932867_53932919	1.31341	Sp2	ENSMUST00000235688.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000235348.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1
mm39_v1_chr9_+_21077010_21077058	1.30409	Sp2	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr11_-_88608958_88609022	1.3011	Sp2	ENSMUST00000107908.2|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr3_+_68912302_68912355	1.29893	Sp2	ENSMUST00000136502.8|Smc4|ENSMUSG00000034349.15|structural maintenance of chromosomes 4	ENSMUST00000107803.7|Smc4|ENSMUSG00000034349.15|structural maintenance of chromosomes 4
mm39_v1_chr17_+_35201130_35201146	1.29583	Sp2	ENSMUST00000173004.2|Lsm2|ENSMUSG00000007050.18|LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr9_-_21202545_21202604	1.28514	Sp2	ENSMUST00000215619.2|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr19_-_41790458_41790499	1.27474	Sp2	ENSMUST00000026150.15|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19	ENSMUST00000163265.9|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19	ENSMUST00000177495.2|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19
mm39_v1_chr7_-_28092113_28092133	1.26455	Sp2	ENSMUST00000003536.9|Med29|ENSMUSG00000003444.9|mediator complex subunit 29
mm39_v1_chr10_-_102864904_102864915	1.22433	Sp2	ENSMUST00000167156.9|Alx1|ENSMUSG00000036602.15|ALX homeobox 1
mm39_v1_chr4_+_148215339_148215372	1.22151	Sp2	ENSMUST00000084129.9|Mad2l2|ENSMUSG00000029003.12|MAD2 mitotic arrest deficient-like 2
mm39_v1_chr7_+_28092370_28092418	1.19797	Sp2	ENSMUST00000003529.9|Paf1|ENSMUSG00000003437.15|Paf1, RNA polymerase II complex component
mm39_v1_chr9_-_21202693_21202704	1.19772	Sp2	ENSMUST00000213407.2|Cdkn2d|ENSMUSG00000096472.3|cyclin dependent kinase inhibitor 2D
mm39_v1_chr17_+_25023263_25023301	1.19263	Sp2	ENSMUST00000234372.2|Meiob|ENSMUSG00000024155.9|meiosis specific with OB domains	ENSMUST00000024972.7|Meiob|ENSMUSG00000024155.9|meiosis specific with OB domains
mm39_v1_chr10_+_80003612_80003680	1.19243	Sp2	ENSMUST00000105365.9|Cirbp|ENSMUSG00000045193.14|cold inducible RNA binding protein
mm39_v1_chr6_+_42326528_42326564	1.18914	Sp2	ENSMUST00000203329.3|Zyx|ENSMUSG00000029860.17|zyxin
mm39_v1_chr12_-_36206626_36206734	1.18246	Sp2	ENSMUST00000220828.2|Bzw2|ENSMUSG00000020547.6|basic leucine zipper and W2 domains 2
mm39_v1_chr9_-_14411690_14411756	1.18033	Sp2	ENSMUST00000115647.3|Kdm4d|ENSMUSG00000053914.10|lysine (K)-specific demethylase 4D
mm39_v1_chr12_-_36206750_36206775	1.16486	Sp2	ENSMUST00000221388.2|Bzw2|ENSMUSG00000020547.6|basic leucine zipper and W2 domains 2
mm39_v1_chr18_+_64473091_64473114	1.15016	Sp2	ENSMUST00000175965.10|Onecut2|ENSMUSG00000045991.20|one cut domain, family member 2
mm39_v1_chr7_+_101467512_101467529	1.14972	Sp2	ENSMUST00000008090.11|Phox2a|ENSMUSG00000007946.12|paired-like homeobox 2a
mm39_v1_chr10_-_102864921_102864977	1.14946	Sp2	ENSMUST00000217946.2|Alx1|ENSMUSG00000036602.15|ALX homeobox 1	ENSMUST00000219194.2|Alx1|ENSMUSG00000036602.15|ALX homeobox 1
mm39_v1_chr7_-_24371457_24371475	1.14635	Sp2	ENSMUST00000078001.7|Tex101|ENSMUSG00000062773.7|testis expressed gene 101
mm39_v1_chr1_-_74544946_74545004	1.14456	Sp2	ENSMUST00000044260.11|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37	ENSMUST00000186282.7|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37
mm39_v1_chr3_+_68912043_68912071	1.13083	Sp2	ENSMUST00000042901.15|Smc4|ENSMUSG00000034349.15|structural maintenance of chromosomes 4
mm39_v1_chr14_-_63482668_63482714	1.12546	Sp2	ENSMUST00000118022.8|Gata4|ENSMUSG00000021944.16|GATA binding protein 4
mm39_v1_chr1_+_74545203_74545264	1.11966	Sp2	ENSMUST00000087215.7|Cnot9|ENSMUSG00000026174.10|CCR4-NOT transcription complex, subunit 9
mm39_v1_chr11_+_69871952_69872040	1.11619	Sp2	ENSMUST00000108593.8|Ctdnep1|ENSMUSG00000018559.17|CTD nuclear envelope phosphatase 1
mm39_v1_chr9_-_103242737_103242880	1.11354	Sp2	ENSMUST00000072249.13|Cdv3|ENSMUSG00000032803.16|carnitine deficiency-associated gene expressed in ventricle 3	ENSMUST00000189896.2|Cdv3|ENSMUSG00000032803.16|carnitine deficiency-associated gene expressed in ventricle 3
mm39_v1_chr14_-_63482720_63482727	1.11313	Sp2	ENSMUST00000067417.10|Gata4|ENSMUSG00000021944.16|GATA binding protein 4
mm39_v1_chr8_-_114575247_114575406	1.11118	Sp2	ENSMUST00000093113.5|Adamts18|ENSMUSG00000053399.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm39_v1_chr9_-_103243039_103243100	1.10994	Sp2	ENSMUST00000035484.11|Cdv3|ENSMUSG00000032803.16|carnitine deficiency-associated gene expressed in ventricle 3
mm39_v1_chr19_+_6391148_6391261	1.10395	Sp2	ENSMUST00000025897.13|Map4k2|ENSMUSG00000024948.16|mitogen-activated protein kinase kinase kinase kinase 2	ENSMUST00000130382.8|Map4k2|ENSMUSG00000024948.16|mitogen-activated protein kinase kinase kinase kinase 2
mm39_v1_chr9_+_40103598_40103634	1.10173	Sp2	ENSMUST00000026693.14|Zfp202|ENSMUSG00000025602.14|zinc finger protein 202	ENSMUST00000168832.2|Zfp202|ENSMUSG00000025602.14|zinc finger protein 202
mm39_v1_chr18_-_14105670_14105844	1.07731	Sp2	ENSMUST00000025288.9|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr6_+_125026865_125026910	1.05575	Sp2	ENSMUST00000112413.8|Acrbp|ENSMUSG00000072770.10|proacrosin binding protein
mm39_v1_chr7_+_45546365_45546525	1.04973	Sp2	ENSMUST00000069772.16|Tmem143|ENSMUSG00000002781.20|transmembrane protein 143	ENSMUST00000210503.2|Tmem143|ENSMUSG00000002781.20|transmembrane protein 143	ENSMUST00000209350.2|Tmem143|ENSMUSG00000002781.20|transmembrane protein 143
mm39_v1_chr4_-_3938352_3938401	1.0466	Sp2	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr11_-_109502243_109502258	1.04635	Sp2	ENSMUST00000103060.10|Wipi1|ENSMUSG00000041895.16|WD repeat domain, phosphoinositide interacting 1	ENSMUST00000047186.10|Wipi1|ENSMUSG00000041895.16|WD repeat domain, phosphoinositide interacting 1	ENSMUST00000106689.2|Wipi1|ENSMUSG00000041895.16|WD repeat domain, phosphoinositide interacting 1
mm39_v1_chr10_+_84412490_84412490	1.0442	Sp2	ENSMUST00000020223.8|Tcp11l2|ENSMUSG00000020034.8|t-complex 11 (mouse) like 2
mm39_v1_chr11_-_105347500_105347574	1.04294	Sp2	ENSMUST00000049995.10|Marchf10|ENSMUSG00000078627.10|membrane associated ring-CH-type finger 10	ENSMUST00000100332.4|Marchf10|ENSMUSG00000078627.10|membrane associated ring-CH-type finger 10
mm39_v1_chr17_+_56611313_56611407	1.04069	Sp2	ENSMUST00000113035.8|Uhrf1|ENSMUSG00000001228.15|ubiquitin-like, containing PHD and RING finger domains, 1	ENSMUST00000113039.9|Uhrf1|ENSMUSG00000001228.15|ubiquitin-like, containing PHD and RING finger domains, 1	ENSMUST00000142387.2|Uhrf1|ENSMUSG00000001228.15|ubiquitin-like, containing PHD and RING finger domains, 1
mm39_v1_chr4_-_43040278_43040318	1.03787	Sp2	ENSMUST00000107958.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B	ENSMUST00000107959.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B	ENSMUST00000152846.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B
mm39_v1_chr1_+_136059101_136059142	1.03329	Sp2	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr19_-_14575395_14575451	1.02567	Sp2	ENSMUST00000052011.15|Tle4|ENSMUSG00000024642.18|transducin-like enhancer of split 4	ENSMUST00000167776.3|Tle4|ENSMUSG00000024642.18|transducin-like enhancer of split 4
mm39_v1_chr7_-_26866157_26866227	1.02519	Sp2	ENSMUST00000080058.11|Egln2|ENSMUSG00000058709.12|egl-9 family hypoxia-inducible factor 2
mm39_v1_chr15_+_58761057_58761080	1.01583	Sp2	ENSMUST00000036904.7|Rnf139|ENSMUSG00000037075.8|ring finger protein 139
mm39_v1_chr2_-_35226981_35226995	1.01461	Sp2	ENSMUST00000028241.7|Stom|ENSMUSG00000026880.12|stomatin
mm39_v1_chr3_-_8988854_8988978	1.00665	Sp2	ENSMUST00000042148.6|Mrps28|ENSMUSG00000040269.6|mitochondrial ribosomal protein S28
mm39_v1_chr10_+_127871493_127871527	0.995946	Sp2	ENSMUST00000092048.13|Naca|ENSMUSG00000061315.15|nascent polypeptide-associated complex alpha polypeptide
mm39_v1_chr11_-_5211558_5211590	0.994407	Sp2	ENSMUST00000020662.15|Kremen1|ENSMUSG00000020393.17|kringle containing transmembrane protein 1
mm39_v1_chrX_+_160500623_160500653	0.994406	Sp2	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr17_+_29020064_29020108	0.993179	Sp2	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr5_-_121974913_121974927	0.992434	Sp2	ENSMUST00000040308.14|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3	ENSMUST00000086310.8|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3
mm39_v1_chr17_-_35265702_35265739	0.991522	Sp2	ENSMUST00000097338.11|Msh5|ENSMUSG00000007035.16|mutS homolog 5
mm39_v1_chr10_-_102864632_102864644	0.986676	Sp2	ENSMUST00000040859.6|Alx1|ENSMUSG00000036602.15|ALX homeobox 1
mm39_v1_chr12_+_112611322_112611401	0.985063	Sp2	ENSMUST00000109755.5|Siva1|ENSMUSG00000064326.14|SIVA1, apoptosis-inducing factor
mm39_v1_chr19_-_5713728_5713739	0.981132	Sp2	ENSMUST00000169854.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1
mm39_v1_chr10_+_127126643_127126698	0.978466	Sp2	ENSMUST00000026475.15|Ddit3|ENSMUSG00000025408.16|DNA-damage inducible transcript 3	ENSMUST00000139091.2|Ddit3|ENSMUSG00000025408.16|DNA-damage inducible transcript 3	ENSMUST00000230446.2|Ddit3|ENSMUSG00000116429.2|DNA-damage inducible transcript 3
mm39_v1_chr3_-_107240989_107240989	0.975549	Sp2	ENSMUST00000061772.11|Rbm15|ENSMUSG00000048109.11|RNA binding motif protein 15
mm39_v1_chr16_+_91526169_91526272	0.974968	Sp2	ENSMUST00000114001.8|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000113999.8|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000064797.12|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000114002.9|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000095909.10|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000056482.14|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)	ENSMUST00000113996.8|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)
mm39_v1_chr19_-_23630143_23630185	0.974875	Sp2	ENSMUST00000035849.5|1700028P14Rik|ENSMUSG00000033053.5|RIKEN cDNA 1700028P14 gene
mm39_v1_chr17_+_35200823_35200916	0.966958	Sp2	ENSMUST00000114011.11|Lsm2|ENSMUSG00000007050.18|LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr19_-_5713648_5713698	0.958329	Sp2	ENSMUST00000080824.13|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1	ENSMUST00000237874.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1	ENSMUST00000071857.13|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1	ENSMUST00000236464.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1
mm39_v1_chr13_-_55661240_55661259	0.958074	Sp2	ENSMUST00000069929.13|Pdlim7|ENSMUSG00000021493.16|PDZ and LIM domain 7	ENSMUST00000069968.13|Pdlim7|ENSMUSG00000021493.16|PDZ and LIM domain 7	ENSMUST00000131306.8|Pdlim7|ENSMUSG00000021493.16|PDZ and LIM domain 7	ENSMUST00000046246.13|Pdlim7|ENSMUSG00000021493.16|PDZ and LIM domain 7
mm39_v1_chr14_+_32321341_32321498	0.950622	Sp2	ENSMUST00000187377.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000189022.8|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000186452.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1
mm39_v1_chr16_+_91526289_91526480	0.945946	Sp2	ENSMUST00000113993.8|Itsn1|ENSMUSG00000022957.21|intersectin 1 (SH3 domain protein 1A)
mm39_v1_chr10_+_127928622_127928700	0.934391	Sp2	ENSMUST00000219072.2|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000045621.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000170054.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A
mm39_v1_chr7_-_26865838_26865946	0.933005	Sp2	ENSMUST00000108382.2|Egln2|ENSMUSG00000058709.12|egl-9 family hypoxia-inducible factor 2
mm39_v1_chr19_+_25482982_25483037	0.921455	Sp2	ENSMUST00000025755.11|Dmrt1|ENSMUSG00000024837.16|doublesex and mab-3 related transcription factor 1
mm39_v1_chr13_-_58421935_58422021	0.902567	Sp2	ENSMUST00000091579.6|Gkap1|ENSMUSG00000021552.8|G kinase anchoring protein 1
mm39_v1_chr2_+_102904014_102904100	0.896739	Sp2	ENSMUST00000011055.7|Apip|ENSMUSG00000010911.13|APAF1 interacting protein
mm39_v1_chr2_+_146697746_146697845	0.893125	Sp2	ENSMUST00000099278.9|Kiz|ENSMUSG00000074749.11|kizuna centrosomal protein	ENSMUST00000156232.2|Kiz|ENSMUSG00000074749.11|kizuna centrosomal protein
mm39_v1_chr4_-_43045685_43045825	0.876514	Sp2	ENSMUST00000107956.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B	ENSMUST00000107957.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B
mm39_v1_chr10_+_128030500_128030511	0.874499	Sp2	ENSMUST00000123291.2|Gls2|ENSMUSG00000044005.14|glutaminase 2 (liver, mitochondrial)
mm39_v1_chr19_+_25483070_25483135	0.868214	Sp2	ENSMUST00000087525.5|Dmrt1|ENSMUSG00000024837.16|doublesex and mab-3 related transcription factor 1
mm39_v1_chr13_-_41233014_41233098	0.865529	Sp2	ENSMUST00000224423.2|Mak|ENSMUSG00000021363.15|male germ cell-associated kinase
mm39_v1_chr8_-_85696369_85696413	0.86239	Sp2	ENSMUST00000109736.9|Rnaseh2a|ENSMUSG00000052926.17|ribonuclease H2, large subunit	ENSMUST00000140561.8|Rnaseh2a|ENSMUSG00000052926.17|ribonuclease H2, large subunit
mm39_v1_chr13_-_58421910_58421929	0.860171	Sp2	ENSMUST00000224505.2|Gkap1|ENSMUSG00000021552.8|G kinase anchoring protein 1
mm39_v1_chr14_+_55815999_55816032	0.857993	Sp2	ENSMUST00000172738.2|Psme1|ENSMUSG00000022216.18|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)	ENSMUST00000089619.13|Psme1|ENSMUSG00000022216.18|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
mm39_v1_chr19_-_5713701_5713723	0.852146	Sp2	ENSMUST00000164304.9|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1	ENSMUST00000237544.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1
mm39_v1_chr15_+_99192968_99193162	0.849107	Sp2	ENSMUST00000128352.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B	ENSMUST00000145482.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B
mm39_v1_chr9_+_44893077_44893096	0.848388	Sp2	ENSMUST00000034602.9|Cd3d|ENSMUSG00000032094.9|CD3 antigen, delta polypeptide
mm39_v1_chr1_+_131755715_131755757	0.847664	Sp2	ENSMUST00000086559.7|Slc41a1|ENSMUSG00000013275.10|solute carrier family 41, member 1
mm39_v1_chr2_-_129139125_129139137	0.847588	Sp2	ENSMUST00000052708.7|Ckap2l|ENSMUSG00000048327.7|cytoskeleton associated protein 2-like
mm39_v1_chr14_-_31552608_31552689	0.845662	Sp2	ENSMUST00000014640.9|Ankrd28|ENSMUSG00000014496.9|ankyrin repeat domain 28
mm39_v1_chr19_+_8944369_8944405	0.842791	Sp2	ENSMUST00000052248.8|Eef1g|ENSMUSG00000071644.11|eukaryotic translation elongation factor 1 gamma
mm39_v1_chr15_-_72932853_72932945	0.839835	Sp2	ENSMUST00000170633.9|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9	ENSMUST00000228960.2|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9
mm39_v1_chr7_+_141027557_141027625	0.838429	Sp2	ENSMUST00000106004.8|Rplp2|ENSMUSG00000025508.14|ribosomal protein, large P2
mm39_v1_chr1_-_93406515_93406544	0.838115	Sp2	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr1_-_191129223_191129263	0.831917	Sp2	ENSMUST00000067976.9|Ppp2r5a|ENSMUSG00000026626.12|protein phosphatase 2, regulatory subunit B', alpha
mm39_v1_chr12_+_3941728_3941801	0.829224	Sp2	ENSMUST00000172689.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000111186.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr18_-_58343423_58343559	0.824256	Sp2	ENSMUST00000025497.8|Fbn2|ENSMUSG00000024598.10|fibrillin 2
mm39_v1_chr10_+_117977708_117977776	0.822358	Sp2	ENSMUST00000020437.13|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1	ENSMUST00000163238.9|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1
mm39_v1_chr2_+_109111083_109111141	0.817858	Sp2	ENSMUST00000028527.8|Kif18a|ENSMUSG00000027115.15|kinesin family member 18A
mm39_v1_chr4_+_108436639_108436671	0.813613	Sp2	ENSMUST00000102744.4|Orc1|ENSMUSG00000028587.19|origin recognition complex, subunit 1
mm39_v1_chr18_-_46658957_46659078	0.800315	Sp2	ENSMUST00000036226.6|Fem1c|ENSMUSG00000033319.6|fem 1 homolog c
mm39_v1_chr8_-_85696040_85696110	0.797669	Sp2	ENSMUST00000214133.2|Gm49661|ENSMUSG00000111184.2|predicted gene, 49661	ENSMUST00000147812.8|Rnaseh2a|ENSMUSG00000052926.17|ribonuclease H2, large subunit
mm39_v1_chr10_+_117977822_117977850	0.797593	Sp2	ENSMUST00000164077.9|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1	ENSMUST00000169817.3|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1
mm39_v1_chr12_+_112645237_112645312	0.794704	Sp2	ENSMUST00000174780.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000169593.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000173942.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42
mm39_v1_chr11_-_96868483_96868537	0.793139	Sp2	ENSMUST00000107624.8|Sp2|ENSMUSG00000018678.14|Sp2 transcription factor
mm39_v1_chr11_-_106051533_106051686	0.790992	Sp2	ENSMUST00000106875.2|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr7_+_141027763_141027817	0.783174	Sp2	ENSMUST00000106003.2|Rplp2|ENSMUSG00000025508.14|ribosomal protein, large P2
mm39_v1_chrX_-_72703330_72703503	0.774893	Sp2	ENSMUST00000114473.8|Pnck|ENSMUSG00000002012.14|pregnancy upregulated non-ubiquitously expressed CaM kinase	ENSMUST00000002087.14|Pnck|ENSMUSG00000002012.14|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm39_v1_chr12_-_85224062_85224080	0.769796	Sp2	ENSMUST00000004913.7|Pgf|ENSMUSG00000004791.8|placental growth factor
mm39_v1_chr11_+_94102255_94102280	0.76974	Sp2	ENSMUST00000041589.6|Tob1|ENSMUSG00000037573.6|transducer of ErbB-2.1
mm39_v1_chr8_+_117648474_117648491	0.76974	Sp2	ENSMUST00000034205.5|Cenpn|ENSMUSG00000031756.6|centromere protein N	ENSMUST00000212775.2|Cenpn|ENSMUSG00000031756.6|centromere protein N
mm39_v1_chr7_+_142558837_142558881	0.7586	Sp2	ENSMUST00000207211.2|Tspan32|ENSMUSG00000000244.18|tetraspanin 32
mm39_v1_chr7_+_101545547_101545638	0.754314	Sp2	ENSMUST00000035395.14|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15	ENSMUST00000106973.8|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15	ENSMUST00000144207.9|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr7_+_29979512_29979567	0.752528	Sp2	ENSMUST00000108187.8|1700020L13Rik|ENSMUSG00000013928.14|RIKEN cDNA 1700020L13 gene	ENSMUST00000014072.6|1700020L13Rik|ENSMUSG00000013928.14|RIKEN cDNA 1700020L13 gene
mm39_v1_chr4_+_3938903_3939043	0.744496	Sp2	ENSMUST00000121210.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000121651.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000041122.11|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000120732.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000119307.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000123769.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7
mm39_v1_chr8_+_111821262_111821273	0.73864	Sp2	ENSMUST00000135302.8|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit	ENSMUST00000039333.10|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit
mm39_v1_chr4_+_3938881_3938901	0.738054	Sp2	ENSMUST00000108386.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000121110.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7	ENSMUST00000149544.8|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7
mm39_v1_chr11_-_70860778_70860805	0.73698	Sp2	ENSMUST00000108530.2|Nup88|ENSMUSG00000040667.12|nucleoporin 88	ENSMUST00000035283.11|Nup88|ENSMUSG00000040667.12|nucleoporin 88	ENSMUST00000108531.8|Nup88|ENSMUSG00000040667.12|nucleoporin 88
mm39_v1_chr14_+_32321824_32321915	0.736541	Sp2	ENSMUST00000068938.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000228878.2|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1
mm39_v1_chr2_-_102903680_102903858	0.734969	Sp2	ENSMUST00000132449.8|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X	ENSMUST00000111183.2|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X	ENSMUST00000011058.9|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X
mm39_v1_chr13_-_41233104_41233182	0.732623	Sp2	ENSMUST00000070193.14|Mak|ENSMUSG00000021363.15|male germ cell-associated kinase	ENSMUST00000165087.8|Mak|ENSMUSG00000021363.15|male germ cell-associated kinase
mm39_v1_chr2_+_164647002_164647029	0.731122	Sp2	ENSMUST00000052107.5|Zswim3|ENSMUSG00000045822.5|zinc finger SWIM-type containing 3
mm39_v1_chr7_-_5017642_5017700	0.723033	Sp2	ENSMUST00000207412.2|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1	ENSMUST00000077385.15|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1	ENSMUST00000165320.3|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1
mm39_v1_chrX_-_52203405_52203445	0.720109	Sp2	ENSMUST00000114843.9|Plac1|ENSMUSG00000061082.12|placental specific protein 1
mm39_v1_chr11_-_69872050_69872090	0.712522	Sp2	ENSMUST00000108594.8|Elp5|ENSMUSG00000018565.18|elongator acetyltransferase complex subunit 5
mm39_v1_chr10_-_44334711_44334747	0.712318	Sp2	ENSMUST00000039174.11|Prdm1|ENSMUSG00000038151.14|PR domain containing 1, with ZNF domain
mm39_v1_chr8_-_85567256_85567310	0.706107	Sp2	ENSMUST00000003911.13|Rad23a|ENSMUSG00000003813.16|RAD23 homolog A, nucleotide excision repair protein	ENSMUST00000109761.9|Rad23a|ENSMUSG00000003813.16|RAD23 homolog A, nucleotide excision repair protein	ENSMUST00000128035.2|Rad23a|ENSMUSG00000003813.16|RAD23 homolog A, nucleotide excision repair protein
mm39_v1_chr5_-_121974873_121974900	0.705999	Sp2	ENSMUST00000118580.6|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3
mm39_v1_chr2_+_104956850_104956874	0.701602	Sp2	ENSMUST00000143043.8|Wt1|ENSMUSG00000016458.16|Wilms tumor 1 homolog
mm39_v1_chr1_-_189901596_189901723	0.701118	Sp2	ENSMUST00000010319.14|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr14_+_121148625_121148665	0.700186	Sp2	ENSMUST00000032898.9|Ipo5|ENSMUSG00000030662.11|importin 5
mm39_v1_chr2_+_119803230_119803384	0.698375	Sp2	ENSMUST00000229024.2|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr7_+_27147403_27147462	0.693052	Sp2	ENSMUST00000037399.16|Blvrb|ENSMUSG00000040466.17|biliverdin reductase B (flavin reductase (NADPH))	ENSMUST00000108358.8|Blvrb|ENSMUSG00000040466.17|biliverdin reductase B (flavin reductase (NADPH))
mm39_v1_chr1_-_160862364_160862419	0.69202	Sp2	ENSMUST00000177003.2|Zbtb37|ENSMUSG00000043467.20|zinc finger and BTB domain containing 37	ENSMUST00000159250.9|Zbtb37|ENSMUSG00000043467.20|zinc finger and BTB domain containing 37	ENSMUST00000162226.9|Zbtb37|ENSMUSG00000043467.20|zinc finger and BTB domain containing 37
mm39_v1_chr3_+_129007599_129007621	0.69092	Sp2	ENSMUST00000042587.12|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2
mm39_v1_chr14_-_25769457_25769513	0.688466	Sp2	ENSMUST00000069180.8|Zcchc24|ENSMUSG00000055538.8|zinc finger, CCHC domain containing 24
mm39_v1_chr1_+_88234454_88234481	0.687689	Sp2	ENSMUST00000040210.14|Trpm8|ENSMUSG00000036251.17|transient receptor potential cation channel, subfamily M, member 8
mm39_v1_chr12_-_32000169_32000196	0.685376	Sp2	ENSMUST00000176520.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr14_-_20844034_20844062	0.684226	Sp2	ENSMUST00000226630.2|Camk2g|ENSMUSG00000021820.19|calcium/calmodulin-dependent protein kinase II gamma
mm39_v1_chr9_+_90045109_90045174	0.683484	Sp2	ENSMUST00000113059.8|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	ENSMUST00000167122.8|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm39_v1_chr3_+_69224189_69224202	0.680471	Sp2	ENSMUST00000029355.9|Ppm1l|ENSMUSG00000027784.11|protein phosphatase 1 (formerly 2C)-like
mm39_v1_chr12_-_32000209_32000245	0.673728	Sp2	ENSMUST00000176084.2|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000176103.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000167458.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr7_-_19426529_19426585	0.67236	Sp2	ENSMUST00000207978.2|Apoc1|ENSMUSG00000040564.15|apolipoprotein C-I	ENSMUST00000108451.4|Apoc1|ENSMUSG00000040564.15|apolipoprotein C-I	ENSMUST00000045035.12|Apoc1|ENSMUSG00000040564.15|apolipoprotein C-I
mm39_v1_chr4_-_43046196_43046227	0.666956	Sp2	ENSMUST00000036462.12|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B
mm39_v1_chr7_+_29931309_29931457	0.66388	Sp2	ENSMUST00000019882.16|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I	ENSMUST00000149654.8|Polr2i|ENSMUSG00000019738.16|polymerase (RNA) II (DNA directed) polypeptide I
mm39_v1_chr2_-_84605732_84605756	0.6636	Sp2	ENSMUST00000023994.10|Serping1|ENSMUSG00000023224.13|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm39_v1_chr13_-_111626562_111626645	0.661542	Sp2	ENSMUST00000091236.11|Gpbp1|ENSMUSG00000032745.19|GC-rich promoter binding protein 1	ENSMUST00000047627.14|Gpbp1|ENSMUSG00000032745.19|GC-rich promoter binding protein 1
mm39_v1_chr17_-_15181491_15181566	0.659021	Sp2	ENSMUST00000024657.12|Phf10|ENSMUSG00000023883.14|PHD finger protein 10
mm39_v1_chr9_+_90045219_90045279	0.657075	Sp2	ENSMUST00000147250.8|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	ENSMUST00000113060.3|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm39_v1_chr7_+_18810097_18810163	0.651464	Sp2	ENSMUST00000032570.14|Dmwd|ENSMUSG00000030410.17|dystrophia myotonica-containing WD repeat motif
mm39_v1_chr4_-_124959395_124959496	0.649722	Sp2	ENSMUST00000036383.4|Dnali1|ENSMUSG00000042707.7|dynein, axonemal, light intermediate polypeptide 1
mm39_v1_chr7_+_105289655_105289723	0.644842	Sp2	ENSMUST00000058333.10|Timm10b|ENSMUSG00000089847.9|translocase of inner mitochondrial membrane 10B
mm39_v1_chr2_+_35939463_35939532	0.636127	Sp2	ENSMUST00000028256.5|Morn5|ENSMUSG00000026894.5|MORN repeat containing 5
mm39_v1_chr18_-_14105591_14105611	0.634753	Sp2	ENSMUST00000234025.2|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr5_+_123887759_123887798	0.634063	Sp2	ENSMUST00000031366.12|Kntc1|ENSMUSG00000029414.12|kinetochore associated 1
mm39_v1_chr11_+_80191692_80191738	0.628228	Sp2	ENSMUST00000017836.8|Rhbdl3|ENSMUSG00000017692.9|rhomboid like 3
mm39_v1_chr7_+_18810167_18810198	0.62474	Sp2	ENSMUST00000108479.2|Dmwd|ENSMUSG00000030410.17|dystrophia myotonica-containing WD repeat motif
mm39_v1_chr9_-_48747474_48747563	0.620888	Sp2	ENSMUST00000216150.2|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr15_+_41652329_41652373	0.619735	Sp2	ENSMUST00000170127.9|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1
mm39_v1_chr10_-_80512117_80512136	0.616311	Sp2	ENSMUST00000200082.5|Mknk2|ENSMUSG00000020190.14|MAP kinase-interacting serine/threonine kinase 2
mm39_v1_chr1_-_172460497_172460529	0.609842	Sp2	ENSMUST00000027826.7|Dusp23|ENSMUSG00000026544.7|dual specificity phosphatase 23
mm39_v1_chr11_-_97078698_97078752	0.609088	Sp2	ENSMUST00000001479.5|Kpnb1|ENSMUSG00000001440.6|karyopherin (importin) beta 1
mm39_v1_chr3_+_146205864_146205888	0.604444	Sp2	ENSMUST00000119130.2|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5
mm39_v1_chr11_+_70861007_70861039	0.599661	Sp2	ENSMUST00000018593.10|Rpain|ENSMUSG00000018449.13|RPA interacting protein
mm39_v1_chr5_-_107745443_107745505	0.598812	Sp2	ENSMUST00000100949.10|Glmn|ENSMUSG00000029276.14|glomulin, FKBP associated protein	ENSMUST00000078021.13|Glmn|ENSMUSG00000029276.14|glomulin, FKBP associated protein
mm39_v1_chr15_+_102829538_102829568	0.598257	Sp2	ENSMUST00000001700.7|Hoxc13|ENSMUSG00000001655.7|homeobox C13
mm39_v1_chr19_+_11889752_11889839	0.591368	Sp2	ENSMUST00000061618.9|Patl1|ENSMUSG00000046139.9|protein associated with topoisomerase II homolog 1 (yeast)
mm39_v1_chr15_-_99149794_99149805	0.589584	Sp2	ENSMUST00000229926.2|Mcrs1|ENSMUSG00000037570.17|microspherule protein 1
mm39_v1_chr7_+_45890379_45890411	0.587668	Sp2	ENSMUST00000164538.2|Otog|ENSMUSG00000009487.11|otogelin
mm39_v1_chr3_+_89960121_89960178	0.582881	Sp2	ENSMUST00000160640.8|4933434E20Rik|ENSMUSG00000027942.18|RIKEN cDNA 4933434E20 gene	ENSMUST00000029552.13|4933434E20Rik|ENSMUSG00000027942.18|RIKEN cDNA 4933434E20 gene	ENSMUST00000162114.8|4933434E20Rik|ENSMUSG00000027942.18|RIKEN cDNA 4933434E20 gene	ENSMUST00000068798.13|4933434E20Rik|ENSMUSG00000027942.18|RIKEN cDNA 4933434E20 gene
mm39_v1_chr7_+_25358589_25358662	0.582485	Sp2	ENSMUST00000079634.8|Exosc5|ENSMUSG00000061286.8|exosome component 5	ENSMUST00000206561.2|Exosc5|ENSMUSG00000061286.8|exosome component 5
mm39_v1_chr12_+_4819277_4819337	0.582159	Sp2	ENSMUST00000020967.11|Pfn4|ENSMUSG00000020639.15|profilin family, member 4
mm39_v1_chr6_-_47571901_47571981	0.576979	Sp2	ENSMUST00000081721.13|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114618.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114616.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit
mm39_v1_chr17_+_23819818_23819857	0.575459	Sp2	ENSMUST00000095595.9|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10	ENSMUST00000115509.8|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10	ENSMUST00000120967.8|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10	ENSMUST00000148062.8|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10	ENSMUST00000129227.8|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10
mm39_v1_chr18_+_35731658_35731729	0.575053	Sp2	ENSMUST00000041314.17|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000236666.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000236020.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000235400.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2
mm39_v1_chr11_+_77928736_77928855	0.574933	Sp2	ENSMUST00000072289.12|Flot2|ENSMUSG00000061981.15|flotillin 2	ENSMUST00000100784.9|Flot2|ENSMUSG00000061981.15|flotillin 2	ENSMUST00000073660.7|Flot2|ENSMUSG00000061981.15|flotillin 2
mm39_v1_chr3_+_94882038_94882064	0.570016	Sp2	ENSMUST00000072287.12|Pi4kb|ENSMUSG00000038861.15|phosphatidylinositol 4-kinase beta
mm39_v1_chr5_+_100054110_100054175	0.56764	Sp2	ENSMUST00000198837.3|Vamp9|ENSMUSG00000105078.3|vesicle-associated membrane protein 9
mm39_v1_chr14_+_54878409_54878409	0.567546	Sp2	ENSMUST00000169818.3|Gm17606|ENSMUSG00000091306.3|predicted gene, 17606
mm39_v1_chr2_+_119803180_119803228	0.563939	Sp2	ENSMUST00000066058.8|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr4_+_132738787_132738817	0.562956	Sp2	ENSMUST00000105915.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1	ENSMUST00000105916.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1
mm39_v1_chr7_+_27173187_27173198	0.561759	Sp2	ENSMUST00000068641.8|Sertad3|ENSMUSG00000055200.8|SERTA domain containing 3
mm39_v1_chr7_+_101859542_101859652	0.550049	Sp2	ENSMUST00000140631.2|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2	ENSMUST00000120879.8|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2	ENSMUST00000146996.8|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2
mm39_v1_chr1_-_190758321_190758395	0.549835	Sp2	ENSMUST00000191946.2|Flvcr1|ENSMUSG00000066595.10|feline leukemia virus subgroup C cellular receptor 1	ENSMUST00000085635.6|Flvcr1|ENSMUSG00000066595.10|feline leukemia virus subgroup C cellular receptor 1
mm39_v1_chr8_+_47986674_47986745	0.549565	Sp2	ENSMUST00000033973.14|Rwdd4a|ENSMUSG00000031568.17|RWD domain containing 4A	ENSMUST00000176379.2|Rwdd4a|ENSMUSG00000031568.17|RWD domain containing 4A
mm39_v1_chr19_-_5399368_5399386	0.548176	Sp2	ENSMUST00000238111.2|Cst6|ENSMUSG00000024846.7|cystatin E/M
mm39_v1_chr7_+_19095111_19095189	0.546821	Sp2	ENSMUST00000047621.14|Ppp1r13l|ENSMUSG00000040734.15|protein phosphatase 1, regulatory subunit 13 like
mm39_v1_chr9_+_65816206_65816302	0.545843	Sp2	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr13_-_38842967_38843034	0.541828	Sp2	ENSMUST00000001757.9|Eef1e1|ENSMUSG00000001707.9|eukaryotic translation elongation factor 1 epsilon 1
mm39_v1_chr14_+_55815879_55815997	0.540137	Sp2	ENSMUST00000174563.8|Psme1|ENSMUSG00000022216.18|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
mm39_v1_chr7_+_27147475_27147494	0.53221	Sp2	ENSMUST00000133750.8|Blvrb|ENSMUSG00000040466.17|biliverdin reductase B (flavin reductase (NADPH))
mm39_v1_chr5_-_140816111_140816223	0.531233	Sp2	ENSMUST00000000153.9|Gna12|ENSMUSG00000000149.11|guanine nucleotide binding protein, alpha 12
mm39_v1_chr15_+_80595486_80595541	0.528075	Sp2	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr3_-_89959770_89959828	0.52619	Sp2	ENSMUST00000029553.16|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000195995.5|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000064639.15|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000199834.5|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like
mm39_v1_chr10_+_117977782_117977821	0.524062	Sp2	ENSMUST00000219087.2|Mdm1|ENSMUSG00000020212.15|transformed mouse 3T3 cell double minute 1
mm39_v1_chr17_-_35265514_35265598	0.523158	Sp2	ENSMUST00000007250.14|Msh5|ENSMUSG00000007035.16|mutS homolog 5
mm39_v1_chr10_-_75353792_75353811	0.522377	Sp2	ENSMUST00000118936.8|Gucd1|ENSMUSG00000033416.16|guanylyl cyclase domain containing 1
mm39_v1_chr2_-_79259235_79259339	0.522339	Sp2	ENSMUST00000143974.2|Cerkl|ENSMUSG00000075256.10|ceramide kinase-like
mm39_v1_chr19_+_42244143_42244201	0.52098	Sp2	ENSMUST00000087123.6|Golga7b|ENSMUSG00000042532.15|golgi autoantigen, golgin subfamily a, 7B
mm39_v1_chr10_+_84938452_84938491	0.515404	Sp2	ENSMUST00000095383.6|Tmem263|ENSMUSG00000060935.7|transmembrane protein 263
mm39_v1_chr3_-_89959739_89959769	0.514126	Sp2	ENSMUST00000199929.2|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000090908.11|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000198322.5|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like	ENSMUST00000196843.5|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like
mm39_v1_chr14_+_70782788_70782800	0.513824	Sp2	ENSMUST00000047218.5|Reep4|ENSMUSG00000033589.5|receptor accessory protein 4
mm39_v1_chr5_+_120787253_120787325	0.513064	Sp2	ENSMUST00000156722.2|Rasal1|ENSMUSG00000029602.12|RAS protein activator like 1 (GAP1 like)
mm39_v1_chr12_+_111504450_111504633	0.510975	Sp2	ENSMUST00000166123.9|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5	ENSMUST00000222441.2|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5
mm39_v1_chr19_-_53933052_53933063	0.510509	Sp2	ENSMUST00000135402.4|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1
mm39_v1_chr13_+_83672389_83672411	0.509006	Sp2	ENSMUST00000200394.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr3_-_89959917_89959935	0.508464	Sp2	ENSMUST00000197903.5|Ubap2l|ENSMUSG00000042520.17|ubiquitin-associated protein 2-like
mm39_v1_chr10_+_75353844_75353884	0.507544	Sp2	ENSMUST00000220229.2|Snrpd3|ENSMUSG00000020180.11|small nuclear ribonucleoprotein D3
mm39_v1_chr8_+_85696695_85696868	0.503792	Sp2	ENSMUST00000164807.2|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2
mm39_v1_chrX_-_72502595_72502652	0.501302	Sp2	ENSMUST00000033737.15|Haus7|ENSMUSG00000031371.15|HAUS augmin-like complex, subunit 7	ENSMUST00000077243.5|Haus7|ENSMUSG00000031371.15|HAUS augmin-like complex, subunit 7
mm39_v1_chr5_+_100666175_100666235	0.498531	Sp2	ENSMUST00000045993.15|Cops4|ENSMUSG00000035297.15|COP9 signalosome subunit 4
mm39_v1_chr11_+_72889889_72889929	0.49781	Sp2	ENSMUST00000021141.14|P2rx1|ENSMUSG00000020787.15|purinergic receptor P2X, ligand-gated ion channel, 1
mm39_v1_chr5_+_100993571_100993599	0.497174	Sp2	ENSMUST00000144623.2|Gpat3|ENSMUSG00000029314.15|glycerol-3-phosphate acyltransferase 3
mm39_v1_chr19_+_5475149_5475202	0.496725	Sp2	ENSMUST00000159759.3|AI837181|ENSMUSG00000047423.11|expressed sequence AI837181	ENSMUST00000054477.8|AI837181|ENSMUSG00000047423.11|expressed sequence AI837181
mm39_v1_chr11_-_69451012_69451039	0.491965	Sp2	ENSMUST00000004036.6|Efnb3|ENSMUSG00000003934.6|ephrin B3
mm39_v1_chr15_-_72933053_72933083	0.490308	Sp2	ENSMUST00000089770.11|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9
mm39_v1_chr6_-_146479323_146479338	0.490286	Sp2	ENSMUST00000032427.15|Ints13|ENSMUSG00000040250.15|integrator complex subunit 13
mm39_v1_chr5_-_110596387_110596468	0.485497	Sp2	ENSMUST00000198768.3|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1
mm39_v1_chr9_-_62888156_62888184	0.48429	Sp2	ENSMUST00000098651.6|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1	ENSMUST00000214830.2|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1
mm39_v1_chr5_+_107745626_107745650	0.481901	Sp2	ENSMUST00000112655.8|Rpap2|ENSMUSG00000033773.15|RNA polymerase II associated protein 2
mm39_v1_chr4_+_52439237_52439287	0.472435	Sp2	ENSMUST00000102915.10|Smc2|ENSMUSG00000028312.20|structural maintenance of chromosomes 2	ENSMUST00000117280.8|Smc2|ENSMUSG00000028312.20|structural maintenance of chromosomes 2	ENSMUST00000142227.3|Smc2|ENSMUSG00000028312.20|structural maintenance of chromosomes 2
mm39_v1_chr11_-_70537878_70537889	0.47033	Sp2	ENSMUST00000014750.15|Slc25a11|ENSMUSG00000014606.15|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm39_v1_chr11_-_103640640_103640655	0.469121	Sp2	ENSMUST00000018630.3|Wnt9b|ENSMUSG00000018486.3|wingless-type MMTV integration site family, member 9B
mm39_v1_chr12_-_75224099_75224133	0.468563	Sp2	ENSMUST00000042299.4|Kcnh5|ENSMUSG00000034402.4|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm39_v1_chr18_-_38088062_38088078	0.465695	Sp2	ENSMUST00000043498.9|Hdac3|ENSMUSG00000024454.17|histone deacetylase 3
mm39_v1_chr11_-_106084334_106084410	0.465551	Sp2	ENSMUST00000007444.14|Strada|ENSMUSG00000069631.15|STE20-related kinase adaptor alpha	ENSMUST00000152008.2|Strada|ENSMUSG00000069631.15|STE20-related kinase adaptor alpha	ENSMUST00000103072.10|Strada|ENSMUSG00000069631.15|STE20-related kinase adaptor alpha	ENSMUST00000106867.2|Strada|ENSMUSG00000069631.15|STE20-related kinase adaptor alpha
mm39_v1_chr14_+_55815817_55815823	0.464911	Sp2	ENSMUST00000174259.8|Psme1|ENSMUSG00000022216.18|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
mm39_v1_chr1_+_138891155_138891210	0.46308	Sp2	ENSMUST00000200533.5|Dennd1b|ENSMUSG00000056268.16|DENN/MADD domain containing 1B
mm39_v1_chr4_-_115980813_115980898	0.458847	Sp2	ENSMUST00000102704.4|Rad54l|ENSMUSG00000028702.16|RAD54 like (S. cerevisiae)	ENSMUST00000102705.10|Rad54l|ENSMUSG00000028702.16|RAD54 like (S. cerevisiae)
mm39_v1_chr2_+_166747946_166748019	0.45734	Sp2	ENSMUST00000002790.14|Cse1l|ENSMUSG00000002718.15|chromosome segregation 1-like (S. cerevisiae)
mm39_v1_chr12_+_4819339_4819360	0.456697	Sp2	ENSMUST00000178879.3|Pfn4|ENSMUSG00000020639.15|profilin family, member 4
mm39_v1_chr5_+_107745562_107745601	0.454749	Sp2	ENSMUST00000112651.8|Rpap2|ENSMUSG00000033773.15|RNA polymerase II associated protein 2	ENSMUST00000112654.8|Rpap2|ENSMUSG00000033773.15|RNA polymerase II associated protein 2	ENSMUST00000065422.12|Rpap2|ENSMUSG00000033773.15|RNA polymerase II associated protein 2
mm39_v1_chr7_+_44803721_44803778	0.453957	Sp2	ENSMUST00000210139.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1	ENSMUST00000211709.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1	ENSMUST00000085375.13|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1	ENSMUST00000209847.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1
mm39_v1_chr8_-_26609153_26609260	0.44983	Sp2	ENSMUST00000037182.14|Hook3|ENSMUSG00000037234.18|hook microtubule tethering protein 3
mm39_v1_chr15_-_76083575_76083606	0.447256	Sp2	ENSMUST00000169438.8|Plec|ENSMUSG00000022565.16|plectin
mm39_v1_chr10_-_80492315_80492357	0.446196	Sp2	ENSMUST00000126980.8|Btbd2|ENSMUSG00000003344.15|BTB (POZ) domain containing 2
mm39_v1_chr4_-_117729717_117729756	0.44221	Sp2	ENSMUST00000171052.8|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24	ENSMUST00000166325.2|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24	ENSMUST00000106422.9|Ccdc24|ENSMUSG00000078588.11|coiled-coil domain containing 24
mm39_v1_chr11_+_117672902_117672957	0.441027	Sp2	ENSMUST00000127080.9|Tmc8|ENSMUSG00000050106.19|transmembrane channel-like gene family 8
mm39_v1_chr4_+_117109148_117109201	0.438074	Sp2	ENSMUST00000062824.12|Tmem53|ENSMUSG00000048772.16|transmembrane protein 53
mm39_v1_chr10_+_25235696_25235742	0.437138	Sp2	ENSMUST00000053748.16|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr17_-_26051871_26051940	0.435392	Sp2	ENSMUST00000236515.2|Stub1|ENSMUSG00000039615.10|STIP1 homology and U-Box containing protein 1	ENSMUST00000236361.2|Stub1|ENSMUSG00000039615.10|STIP1 homology and U-Box containing protein 1
mm39_v1_chr3_+_127426783_127426789	0.432992	Sp2	ENSMUST00000029587.9|Neurog2|ENSMUSG00000027967.9|neurogenin 2
mm39_v1_chrX_-_17185555_17185607	0.43189	Sp2	ENSMUST00000026014.8|Efhc2|ENSMUSG00000025038.8|EF-hand domain (C-terminal) containing 2
mm39_v1_chr4_+_108857967_108858065	0.431698	Sp2	ENSMUST00000106644.9|Nrd1|ENSMUSG00000053510.13|nardilysin, N-arginine dibasic convertase, NRD convertase 1
mm39_v1_chr17_-_28039506_28039546	0.429697	Sp2	ENSMUST00000114859.9|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains	ENSMUST00000233533.2|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains
mm39_v1_chr4_-_16013867_16013890	0.425445	Sp2	ENSMUST00000037198.10|Osgin2|ENSMUSG00000041153.10|oxidative stress induced growth inhibitor family member 2
mm39_v1_chr11_-_115078147_115078216	0.424004	Sp2	ENSMUST00000103038.8|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)	ENSMUST00000103039.2|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)	ENSMUST00000103040.11|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)
mm39_v1_chr19_-_10502468_10502545	0.418988	Sp2	ENSMUST00000025570.8|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2	ENSMUST00000236455.2|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2
mm39_v1_chr6_-_83808717_83808732	0.418564	Sp2	ENSMUST00000058383.9|Paip2b|ENSMUSG00000045896.15|poly(A) binding protein interacting protein 2B
mm39_v1_chrX_-_133909934_133909986	0.41409	Sp2	ENSMUST00000113185.9|Zmat1|ENSMUSG00000052676.17|zinc finger, matrin type 1	ENSMUST00000064659.6|Zmat1|ENSMUSG00000052676.17|zinc finger, matrin type 1
mm39_v1_chr4_+_63462984_63463009	0.413162	Sp2	ENSMUST00000035301.7|Atp6v1g1|ENSMUSG00000039105.7|ATPase, H+ transporting, lysosomal V1 subunit G1
mm39_v1_chrX_+_158155171_158155285	0.411975	Sp2	ENSMUST00000087143.7|Eif1ax|ENSMUSG00000067194.7|eukaryotic translation initiation factor 1A, X-linked
mm39_v1_chr15_-_98779134_98779215	0.410984	Sp2	ENSMUST00000229348.2|Rhebl1|ENSMUSG00000023755.11|Ras homolog enriched in brain like 1	ENSMUST00000229876.2|Rhebl1|ENSMUSG00000023755.11|Ras homolog enriched in brain like 1
mm39_v1_chr2_+_127967951_127967976	0.409854	Sp2	ENSMUST00000089634.12|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000019281.14|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000110341.9|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103211.8|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103210.2|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)
mm39_v1_chr17_+_35827997_35828168	0.4087	Sp2	ENSMUST00000164242.9|Cchcr1|ENSMUSG00000040312.15|coiled-coil alpha-helical rod protein 1	ENSMUST00000045956.14|Cchcr1|ENSMUSG00000040312.15|coiled-coil alpha-helical rod protein 1
mm39_v1_chr7_-_44785815_44785876	0.407875	Sp2	ENSMUST00000146760.7|Flt3l|ENSMUSG00000110206.2|FMS-like tyrosine kinase 3 ligand
mm39_v1_chr7_-_44785709_44785754	0.40782	Sp2	ENSMUST00000211429.2|Flt3l|ENSMUSG00000110206.2|FMS-like tyrosine kinase 3 ligand
mm39_v1_chr6_+_30401864_30401997	0.406512	Sp2	ENSMUST00000068240.13|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000068259.10|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000132581.8|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10
mm39_v1_chr19_-_45804446_45804515	0.405117	Sp2	ENSMUST00000079431.10|Kcnip2|ENSMUSG00000025221.17|Kv channel-interacting protein 2	ENSMUST00000026247.13|Kcnip2|ENSMUSG00000025221.17|Kv channel-interacting protein 2	ENSMUST00000162528.9|Kcnip2|ENSMUSG00000025221.17|Kv channel-interacting protein 2
mm39_v1_chr5_-_100126707_100126718	0.398033	Sp2	ENSMUST00000170912.2|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr11_+_117005958_117006015	0.393702	Sp2	ENSMUST00000021177.15|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1
mm39_v1_chr11_-_118139312_118139330	0.391644	Sp2	ENSMUST00000100181.11|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr1_-_75294234_75294303	0.390494	Sp2	ENSMUST00000066668.14|Dnpep|ENSMUSG00000026209.16|aspartyl aminopeptidase	ENSMUST00000185797.7|Dnpep|ENSMUSG00000026209.16|aspartyl aminopeptidase
mm39_v1_chr5_-_137331823_137331859	0.389714	Sp2	ENSMUST00000039991.14|Slc12a9|ENSMUSG00000037344.15|solute carrier family 12 (potassium/chloride transporters), member 9
mm39_v1_chr10_-_44334683_44334710	0.386817	Sp2	ENSMUST00000105490.3|Prdm1|ENSMUSG00000038151.14|PR domain containing 1, with ZNF domain
mm39_v1_chr4_+_108857803_108857903	0.38662	Sp2	ENSMUST00000065977.11|Nrd1|ENSMUSG00000053510.13|nardilysin, N-arginine dibasic convertase, NRD convertase 1	ENSMUST00000102736.9|Nrd1|ENSMUSG00000053510.13|nardilysin, N-arginine dibasic convertase, NRD convertase 1
mm39_v1_chr8_-_22675773_22675856	0.386351	Sp2	ENSMUST00000046916.9|Ckap2|ENSMUSG00000037725.9|cytoskeleton associated protein 2
mm39_v1_chrX_-_149596680_149596709	0.385798	Sp2	ENSMUST00000112700.8|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr7_-_18900044_18900059	0.385223	Sp2	ENSMUST00000094790.5|Gipr|ENSMUSG00000030406.8|gastric inhibitory polypeptide receptor
mm39_v1_chr13_-_64300964_64301043	0.385131	Sp2	ENSMUST00000059817.12|Zfp367|ENSMUSG00000044934.14|zinc finger protein 367	ENSMUST00000117241.2|Zfp367|ENSMUSG00000044934.14|zinc finger protein 367
mm39_v1_chr17_+_36134398_36134441	0.38357	Sp2	ENSMUST00000173493.8|Flot1|ENSMUSG00000059714.14|flotillin 1	ENSMUST00000173147.8|Flot1|ENSMUSG00000059714.14|flotillin 1
mm39_v1_chr10_-_128401773_128401868	0.383157	Sp2	ENSMUST00000026425.13|Pa2g4|ENSMUSG00000025364.14|proliferation-associated 2G4	ENSMUST00000131728.4|Pa2g4|ENSMUSG00000025364.14|proliferation-associated 2G4
mm39_v1_chr8_+_4303067_4303140	0.382144	Sp2	ENSMUST00000011981.5|Snapc2|ENSMUSG00000011837.5|small nuclear RNA activating complex, polypeptide 2	ENSMUST00000208316.2|Snapc2|ENSMUSG00000011837.5|small nuclear RNA activating complex, polypeptide 2
mm39_v1_chr5_-_107745404_107745412	0.379989	Sp2	ENSMUST00000124140.2|Glmn|ENSMUSG00000029276.14|glomulin, FKBP associated protein
mm39_v1_chr8_+_108020092_108020118	0.375723	Sp2	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr2_+_119505543_119505589	0.37546	Sp2	ENSMUST00000028767.9|Rtf1|ENSMUSG00000027304.10|RTF1, Paf1/RNA polymerase II complex component
mm39_v1_chrX_+_159285149_159285197	0.373617	Sp2	ENSMUST00000112377.8|Phka2|ENSMUSG00000031295.14|phosphorylase kinase alpha 2	ENSMUST00000139587.8|Phka2|ENSMUSG00000031295.14|phosphorylase kinase alpha 2
mm39_v1_chr7_-_16020668_16020720	0.373172	Sp2	ENSMUST00000150528.9|Ccdc9|ENSMUSG00000041375.19|coiled-coil domain containing 9	ENSMUST00000118976.9|Ccdc9|ENSMUSG00000041375.19|coiled-coil domain containing 9	ENSMUST00000146609.3|Ccdc9|ENSMUSG00000041375.19|coiled-coil domain containing 9
mm39_v1_chr8_+_85598734_85598741	0.37256	Sp2	ENSMUST00000170296.2|Syce2|ENSMUSG00000003824.13|synaptonemal complex central element protein 2	ENSMUST00000136026.8|Syce2|ENSMUSG00000003824.13|synaptonemal complex central element protein 2
mm39_v1_chr6_+_87405968_87405982	0.372081	Sp2	ENSMUST00000032125.7|Bmp10|ENSMUSG00000030046.7|bone morphogenetic protein 10
mm39_v1_chr12_-_118265103_118265162	0.369459	Sp2	ENSMUST00000222314.2|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4	ENSMUST00000026367.11|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4
mm39_v1_chr8_+_4216556_4216739	0.368689	Sp2	ENSMUST00000239400.2|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000177053.8|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176149.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176072.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176825.3|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like
mm39_v1_chr3_-_68911835_68911879	0.368443	Sp2	ENSMUST00000107812.8|Ift80|ENSMUSG00000027778.16|intraflagellar transport 80
mm39_v1_chr19_-_10502546_10502562	0.368272	Sp2	ENSMUST00000237827.2|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2
mm39_v1_chr7_+_66489500_66489561	0.366285	Sp2	ENSMUST00000107478.9|Adamts17|ENSMUSG00000058145.17|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm39_v1_chr7_-_30251680_30251741	0.365191	Sp2	ENSMUST00000215288.2|Proser3|ENSMUSG00000036864.17|proline and serine rich 3	ENSMUST00000108165.8|Proser3|ENSMUSG00000036864.17|proline and serine rich 3	ENSMUST00000153594.3|Proser3|ENSMUSG00000036864.17|proline and serine rich 3
mm39_v1_chr9_-_20888054_20888077	0.364154	Sp2	ENSMUST00000054197.7|S1pr2|ENSMUSG00000043895.7|sphingosine-1-phosphate receptor 2
mm39_v1_chr4_+_120711974_120712041	0.363667	Sp2	ENSMUST00000071093.9|Rims3|ENSMUSG00000032890.18|regulating synaptic membrane exocytosis 3
mm39_v1_chr17_-_36220518_36220590	0.360481	Sp2	ENSMUST00000141132.2|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1
mm39_v1_chr2_-_119985078_119985092	0.360372	Sp2	ENSMUST00000028755.8|Ehd4|ENSMUSG00000027293.14|EH-domain containing 4
mm39_v1_chr1_-_160620478_160620539	0.359999	Sp2	ENSMUST00000195442.6|Rabgap1l|ENSMUSG00000026721.17|RAB GTPase activating protein 1-like	ENSMUST00000028049.13|Rabgap1l|ENSMUSG00000026721.17|RAB GTPase activating protein 1-like
mm39_v1_chr16_+_51851588_51851705	0.359894	Sp2	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr4_+_117109204_117109254	0.356197	Sp2	ENSMUST00000125943.8|Tmem53|ENSMUSG00000048772.16|transmembrane protein 53	ENSMUST00000106434.8|Tmem53|ENSMUSG00000048772.16|transmembrane protein 53
mm39_v1_chr17_+_85920860_85921036	0.354788	Sp2	ENSMUST00000175898.4|Six3|ENSMUSG00000038805.11|sine oculis-related homeobox 3
mm39_v1_chr2_+_71219561_71219622	0.354245	Sp2	ENSMUST00000028408.3|Hat1|ENSMUSG00000027018.12|histone aminotransferase 1
mm39_v1_chr8_-_106016097_106016173	0.354028	Sp2	ENSMUST00000171788.8|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene
mm39_v1_chr3_+_89680867_89680950	0.353822	Sp2	ENSMUST00000038356.13|Ube2q1|ENSMUSG00000042572.13|ubiquitin-conjugating enzyme E2Q family member 1
mm39_v1_chr8_-_94763634_94763659	0.35359	Sp2	ENSMUST00000212981.2|Nudt21|ENSMUSG00000031754.11|nudix (nucleoside diphosphate linked moiety X)-type motif 21	ENSMUST00000034204.11|Nudt21|ENSMUSG00000031754.11|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm39_v1_chr6_-_70769135_70769216	0.352502	Sp2	ENSMUST00000066134.6|Rpia|ENSMUSG00000053604.6|ribose 5-phosphate isomerase A
mm39_v1_chr17_+_34149820_34149904	0.345602	Sp2	ENSMUST00000234226.2|Rgl2|ENSMUSG00000041354.17|ral guanine nucleotide dissociation stimulator-like 2
mm39_v1_chr7_-_101859379_101859390	0.33947	Sp2	ENSMUST00000210682.2|Nup98|ENSMUSG00000063550.9|nucleoporin 98
mm39_v1_chr1_-_143879877_143879899	0.33876	Sp2	ENSMUST00000127206.8|Rgs2|ENSMUSG00000026360.10|regulator of G-protein signaling 2
mm39_v1_chr5_-_142536720_142536865	0.338416	Sp2	ENSMUST00000129212.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000110785.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000063635.15|Radil|ENSMUSG00000029576.18|Ras association and DIL domains
mm39_v1_chr8_+_107409684_107409727	0.338164	Sp2	ENSMUST00000048359.5|Tango6|ENSMUSG00000041949.7|transport and golgi organization 6
mm39_v1_chr11_-_118139331_118139397	0.337134	Sp2	ENSMUST00000017276.14|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr19_+_10502612_10502671	0.336026	Sp2	ENSMUST00000237321.2|Cpsf7|ENSMUSG00000034820.5|cleavage and polyadenylation specific factor 7	ENSMUST00000038379.5|Cpsf7|ENSMUSG00000034820.5|cleavage and polyadenylation specific factor 7
mm39_v1_chr10_+_25235748_25235785	0.334983	Sp2	ENSMUST00000218903.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr1_-_157240138_157240191	0.334868	Sp2	ENSMUST00000078308.13|Rasal2|ENSMUSG00000070565.12|RAS protein activator like 2
mm39_v1_chr17_-_33979442_33979504	0.333958	Sp2	ENSMUST00000057373.14|Rab11b|ENSMUSG00000077450.14|RAB11B, member RAS oncogene family
mm39_v1_chr4_-_16013783_16013806	0.333103	Sp2	ENSMUST00000149891.2|Osgin2|ENSMUSG00000041153.10|oxidative stress induced growth inhibitor family member 2
mm39_v1_chr9_-_20887967_20888043	0.331804	Sp2	ENSMUST00000214218.2|S1pr2|ENSMUSG00000043895.7|sphingosine-1-phosphate receptor 2
mm39_v1_chr17_-_88372315_88372456	0.331688	Sp2	ENSMUST00000235056.2|Fbxo11|ENSMUSG00000005371.16|F-box protein 11	ENSMUST00000130379.9|Fbxo11|ENSMUSG00000005371.16|F-box protein 11
mm39_v1_chr2_+_158466802_158466816	0.331332	Sp2	ENSMUST00000045644.9|Actr5|ENSMUSG00000037761.17|ARP5 actin-related protein 5
mm39_v1_chr10_+_128030315_128030338	0.331014	Sp2	ENSMUST00000044776.13|Gls2|ENSMUSG00000044005.14|glutaminase 2 (liver, mitochondrial)
mm39_v1_chr17_-_33979280_33979322	0.330693	Sp2	ENSMUST00000173860.8|Rab11b|ENSMUSG00000077450.14|RAB11B, member RAS oncogene family
mm39_v1_chr6_+_49344673_49344830	0.329438	Sp2	ENSMUST00000060561.15|Fam221a|ENSMUSG00000047115.16|family with sequence similarity 221, member A	ENSMUST00000121903.2|Fam221a|ENSMUSG00000047115.16|family with sequence similarity 221, member A	ENSMUST00000134786.2|Fam221a|ENSMUSG00000047115.16|family with sequence similarity 221, member A
mm39_v1_chr14_-_31552335_31552398	0.328993	Sp2	ENSMUST00000228037.2|Ankrd28|ENSMUSG00000014496.9|ankyrin repeat domain 28
mm39_v1_chr2_+_32178255_32178268	0.328369	Sp2	ENSMUST00000239447.2|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000239474.2|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000113377.8|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2
mm39_v1_chr10_-_116984386_116984452	0.326834	Sp2	ENSMUST00000020381.5|Frs2|ENSMUSG00000020170.5|fibroblast growth factor receptor substrate 2
mm39_v1_chr15_-_98779269_98779361	0.325733	Sp2	ENSMUST00000024518.11|Rhebl1|ENSMUSG00000023755.11|Ras homolog enriched in brain like 1
mm39_v1_chr2_+_121279842_121279874	0.32413	Sp2	ENSMUST00000110615.8|Serf2|ENSMUSG00000074884.13|small EDRK-rich factor 2	ENSMUST00000099475.12|Serf2|ENSMUSG00000074884.13|small EDRK-rich factor 2
mm39_v1_chr9_-_75317233_75317320	0.32399	Sp2	ENSMUST00000049355.11|Mapk6|ENSMUSG00000042688.17|mitogen-activated protein kinase 6
mm39_v1_chr6_-_71609881_71609974	0.321138	Sp2	ENSMUST00000065509.11|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A	ENSMUST00000207023.2|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A
mm39_v1_chr8_+_11606056_11606111	0.320097	Sp2	ENSMUST00000210740.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000210670.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000054399.6|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000209646.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1
mm39_v1_chr16_-_10360893_10360928	0.318818	Sp2	ENSMUST00000184863.8|Dexi|ENSMUSG00000038055.13|dexamethasone-induced transcript	ENSMUST00000038281.6|Dexi|ENSMUSG00000038055.13|dexamethasone-induced transcript
mm39_v1_chr14_-_67246282_67246326	0.31819	Sp2	ENSMUST00000111115.8|Bnip3l|ENSMUSG00000022051.16|BCL2/adenovirus E1B interacting protein 3-like	ENSMUST00000022634.9|Bnip3l|ENSMUSG00000022051.16|BCL2/adenovirus E1B interacting protein 3-like
mm39_v1_chr3_+_88049875_88049892	0.317106	Sp2	ENSMUST00000107558.9|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000107559.3|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr7_+_127376550_127376585	0.316768	Sp2	ENSMUST00000126761.8|Setd1a|ENSMUSG00000042308.15|SET domain containing 1A	ENSMUST00000047157.13|Setd1a|ENSMUSG00000042308.15|SET domain containing 1A
mm39_v1_chr15_-_82096997_82097016	0.31662	Sp2	ENSMUST00000179269.3|Shisa8|ENSMUSG00000096883.3|shisa family member 8
mm39_v1_chr4_+_132366298_132366430	0.314797	Sp2	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr12_-_108145498_108145594	0.313932	Sp2	ENSMUST00000071095.14|Setd3|ENSMUSG00000056770.16|SET domain containing 3
mm39_v1_chr2_-_104324035_104324098	0.311412	Sp2	ENSMUST00000111124.8|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr9_-_21199232_21199283	0.310149	Sp2	ENSMUST00000184326.8|Kri1|ENSMUSG00000035047.10|KRI1 homolog	ENSMUST00000038671.10|Kri1|ENSMUSG00000035047.10|KRI1 homolog
mm39_v1_chr7_+_127440924_127440985	0.309831	Sp2	ENSMUST00000033075.14|Stx4a|ENSMUSG00000030805.15|syntaxin 4A (placental)
mm39_v1_chr2_-_32178034_32178087	0.308808	Sp2	ENSMUST00000183946.8|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)	ENSMUST00000113400.3|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)	ENSMUST00000050410.11|Swi5|ENSMUSG00000044627.12|SWI5 recombination repair homolog (yeast)
mm39_v1_chr9_+_65816370_65816383	0.307972	Sp2	ENSMUST00000206594.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr7_+_5017414_5017453	0.307712	Sp2	ENSMUST00000207901.2|Zfp524|ENSMUSG00000051184.8|zinc finger protein 524
mm39_v1_chr1_-_136876902_136876929	0.305206	Sp2	ENSMUST00000195428.2|Nr5a2|ENSMUSG00000026398.15|nuclear receptor subfamily 5, group A, member 2
mm39_v1_chr17_+_36134450_36134485	0.30292	Sp2	ENSMUST00000172846.2|Flot1|ENSMUSG00000059714.14|flotillin 1
mm39_v1_chr7_+_44804068_44804158	0.302505	Sp2	ENSMUST00000209954.2|Pih1d1|ENSMUSG00000003423.16|PIH1 domain containing 1
mm39_v1_chr13_-_58506890_58506936	0.300771	Sp2	ENSMUST00000225388.2|Kif27|ENSMUSG00000060176.5|kinesin family member 27
mm39_v1_chr14_+_26760898_26760951	0.297645	Sp2	ENSMUST00000035336.5|Il17rd|ENSMUSG00000040717.7|interleukin 17 receptor D
mm39_v1_chr10_+_128541049_128541078	0.295213	Sp2	ENSMUST00000219157.2|Pmel|ENSMUSG00000025359.11|premelanosome protein
mm39_v1_chr5_-_100126773_100126833	0.295041	Sp2	ENSMUST00000112939.10|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000171786.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000072750.13|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000019128.15|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000172361.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr7_+_136496328_136496372	0.293108	Sp2	ENSMUST00000081510.4|Mgmt|ENSMUSG00000054612.5|O-6-methylguanine-DNA methyltransferase
mm39_v1_chr5_+_100666278_100666340	0.292698	Sp2	ENSMUST00000151414.8|Cops4|ENSMUSG00000035297.15|COP9 signalosome subunit 4
mm39_v1_chr9_-_57552844_57552955	0.291788	Sp2	ENSMUST00000216979.2|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase	ENSMUST00000034863.8|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase
mm39_v1_chrX_-_168103266_168103379	0.286959	Sp2	ENSMUST00000033717.9|Hccs|ENSMUSG00000031352.11|holocytochrome c synthetase	ENSMUST00000112115.2|Hccs|ENSMUSG00000031352.11|holocytochrome c synthetase
mm39_v1_chr9_+_14411907_14411914	0.284708	Sp2	ENSMUST00000004200.9|Cwc15|ENSMUSG00000004096.10|CWC15 spliceosome-associated protein
mm39_v1_chr11_-_118139418_118139433	0.283546	Sp2	ENSMUST00000106305.9|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr10_-_24803336_24803382	0.280815	Sp2	ENSMUST00000020161.10|Arg1|ENSMUSG00000019987.10|arginase, liver
mm39_v1_chr2_+_38229270_38229293	0.279915	Sp2	ENSMUST00000143783.9|Lhx2|ENSMUSG00000000247.12|LIM homeobox protein 2
mm39_v1_chr9_+_14411921_14411947	0.279628	Sp2	ENSMUST00000213913.2|Cwc15|ENSMUSG00000004096.10|CWC15 spliceosome-associated protein
mm39_v1_chr11_+_74816640_74816693	0.27839	Sp2	ENSMUST00000045281.13|Smg6|ENSMUSG00000038290.16|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm39_v1_chr2_-_23045876_23046036	0.278042	Sp2	ENSMUST00000028119.7|Mastl|ENSMUSG00000026779.7|microtubule associated serine/threonine kinase-like
mm39_v1_chr17_+_23819861_23819915	0.276964	Sp2	ENSMUST00000123866.8|Zscan10|ENSMUSG00000023902.19|zinc finger and SCAN domain containing 10
mm39_v1_chr3_+_94882142_94882276	0.276912	Sp2	ENSMUST00000167008.8|Pi4kb|ENSMUSG00000038861.15|phosphatidylinositol 4-kinase beta	ENSMUST00000107251.9|Pi4kb|ENSMUSG00000038861.15|phosphatidylinositol 4-kinase beta
mm39_v1_chr4_-_126861918_126861947	0.276555	Sp2	ENSMUST00000106108.9|Zmym4|ENSMUSG00000042446.17|zinc finger, MYM-type 4
mm39_v1_chr1_-_160620768_160620781	0.276323	Sp2	ENSMUST00000193810.2|Rabgap1l|ENSMUSG00000026721.17|RAB GTPase activating protein 1-like
mm39_v1_chr12_+_111504640_111504675	0.271949	Sp2	ENSMUST00000222375.2|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5	ENSMUST00000222388.2|Eif5|ENSMUSG00000021282.18|eukaryotic translation initiation factor 5
mm39_v1_chr13_-_55477535_55477589	0.271835	Sp2	ENSMUST00000021941.8|Mxd3|ENSMUSG00000021485.15|Max dimerization protein 3
mm39_v1_chr11_+_95010935_95010954	0.271194	Sp2	ENSMUST00000092768.7|Dlx3|ENSMUSG00000001510.9|distal-less homeobox 3
mm39_v1_chr11_-_58059293_58059370	0.270444	Sp2	ENSMUST00000172035.8|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5	ENSMUST00000035604.13|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5	ENSMUST00000102711.9|Gemin5|ENSMUSG00000037275.15|gem nuclear organelle associated protein 5
mm39_v1_chr3_-_89867869_89867936	0.269393	Sp2	ENSMUST00000069805.14|Atp8b2|ENSMUSG00000060671.13|ATPase, class I, type 8B, member 2
mm39_v1_chr17_-_34174631_34174671	0.267878	Sp2	ENSMUST00000174609.9|Rps18|ENSMUSG00000008668.16|ribosomal protein S18	ENSMUST00000008812.9|Rps18|ENSMUSG00000008668.16|ribosomal protein S18
mm39_v1_chr11_+_70861292_70861343	0.267054	Sp2	ENSMUST00000178822.8|Rpain|ENSMUSG00000018449.13|RPA interacting protein	ENSMUST00000108529.10|Rpain|ENSMUSG00000018449.13|RPA interacting protein	ENSMUST00000169965.8|Rpain|ENSMUSG00000018449.13|RPA interacting protein	ENSMUST00000167509.2|Rpain|ENSMUSG00000018449.13|RPA interacting protein
mm39_v1_chr9_+_56982622_56982727	0.265262	Sp2	ENSMUST00000167715.8|Sin3a|ENSMUSG00000042557.15|transcriptional regulator, SIN3A (yeast)
mm39_v1_chr6_-_71609635_71609678	0.263847	Sp2	ENSMUST00000167220.4|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A	ENSMUST00000205289.2|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A
mm39_v1_chr17_+_26357648_26357924	0.259322	Sp2	ENSMUST00000074370.10|Axin1|ENSMUSG00000024182.17|axin 1	ENSMUST00000118904.9|Axin1|ENSMUSG00000024182.17|axin 1	ENSMUST00000163421.8|Axin1|ENSMUSG00000024182.17|axin 1
mm39_v1_chr6_-_34887487_34887516	0.257214	Sp2	ENSMUST00000152488.8|Wdr91|ENSMUSG00000058486.12|WD repeat domain 91
mm39_v1_chr15_-_5273659_5273674	0.256292	Sp2	ENSMUST00000047379.15|Ptger4|ENSMUSG00000039942.16|prostaglandin E receptor 4 (subtype EP4)
mm39_v1_chr2_-_34803988_34804055	0.255011	Sp2	ENSMUST00000028232.7|Phf19|ENSMUSG00000026873.10|PHD finger protein 19	ENSMUST00000202907.2|Phf19|ENSMUSG00000026873.10|PHD finger protein 19
mm39_v1_chr2_+_32498716_32498730	0.254993	Sp2	ENSMUST00000129165.2|St6galnac6|ENSMUSG00000026811.19|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm39_v1_chr12_+_85646162_85646190	0.254626	Sp2	ENSMUST00000050687.14|Jdp2|ENSMUSG00000034271.17|Jun dimerization protein 2
mm39_v1_chrX_-_151125415_151125426	0.252774	Sp2	ENSMUST00000044509.7|Tspyl2|ENSMUSG00000041096.14|TSPY-like 2
mm39_v1_chr3_-_68911886_68911918	0.250153	Sp2	ENSMUST00000169064.8|Ift80|ENSMUSG00000027778.16|intraflagellar transport 80
mm39_v1_chrX_-_105528503_105528770	0.249808	Sp2	ENSMUST00000138724.8|Fndc3c1|ENSMUSG00000033737.15|fibronectin type III domain containing 3C1	ENSMUST00000149331.2|Fndc3c1|ENSMUSG00000033737.15|fibronectin type III domain containing 3C1
mm39_v1_chr14_+_45567245_45567268	0.248978	Sp2	ENSMUST00000022380.9|Psmc6|ENSMUSG00000021832.9|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm39_v1_chr16_+_8647959_8647966	0.248786	Sp2	ENSMUST00000023150.7|1810013L24Rik|ENSMUSG00000022507.7|RIKEN cDNA 1810013L24 gene
mm39_v1_chr7_-_4687916_4688067	0.247274	Sp2	ENSMUST00000206306.2|Hspbp1|ENSMUSG00000063802.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	ENSMUST00000205952.2|Hspbp1|ENSMUSG00000063802.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	ENSMUST00000079970.6|Hspbp1|ENSMUSG00000063802.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm39_v1_chr1_-_156767196_156767224	0.245292	Sp2	ENSMUST00000185198.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr11_+_117006020_117006083	0.244242	Sp2	ENSMUST00000103026.10|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1	ENSMUST00000090433.6|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1
mm39_v1_chr7_+_66489465_66489499	0.24343	Sp2	ENSMUST00000098382.10|Adamts17|ENSMUSG00000058145.17|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm39_v1_chr1_-_16727242_16727274	0.241921	Sp2	ENSMUST00000186948.7|Eloc|ENSMUSG00000079658.10|elongin C	ENSMUST00000187910.7|Eloc|ENSMUSG00000079658.10|elongin C	ENSMUST00000115352.10|Eloc|ENSMUSG00000079658.10|elongin C
mm39_v1_chr7_-_44635813_44635992	0.240754	Sp2	ENSMUST00000208829.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000207370.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000107843.11|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1
mm39_v1_chr8_-_106015682_106015725	0.238169	Sp2	ENSMUST00000212922.2|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene	ENSMUST00000212219.2|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene
mm39_v1_chr7_+_122723365_122723446	0.23682	Sp2	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr19_-_5821442_5821453	0.236353	Sp2	ENSMUST00000236978.2|Scyl1|ENSMUSG00000024941.10|SCY1-like 1 (S. cerevisiae)
mm39_v1_chr17_-_28039419_28039439	0.236227	Sp2	ENSMUST00000233508.2|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains	ENSMUST00000075076.6|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains
mm39_v1_chr13_-_58276353_58276381	0.235125	Sp2	ENSMUST00000007980.7|Hnrnpa0|ENSMUSG00000007836.7|heterogeneous nuclear ribonucleoprotein A0
mm39_v1_chr19_+_44551280_44551318	0.232376	Sp2	ENSMUST00000040455.5|Hif1an|ENSMUSG00000036450.5|hypoxia-inducible factor 1, alpha subunit inhibitor
mm39_v1_chr11_+_90140294_90140312	0.232255	Sp2	ENSMUST00000004050.7|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr6_+_70933434_70933590	0.231836	Sp2	ENSMUST00000163089.2|Foxi3|ENSMUSG00000055874.7|forkhead box I3	ENSMUST00000069634.6|Foxi3|ENSMUSG00000055874.7|forkhead box I3
mm39_v1_chr12_-_101049884_101049977	0.23154	Sp2	ENSMUST00000048305.10|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A	ENSMUST00000163095.9|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A
mm39_v1_chr7_+_58878490_58878518	0.230373	Sp2	ENSMUST00000202945.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000107537.5|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr8_+_12965876_12965975	0.224128	Sp2	ENSMUST00000110876.9|Mcf2l|ENSMUSG00000031442.22|mcf.2 transforming sequence-like	ENSMUST00000110879.9|Mcf2l|ENSMUSG00000031442.22|mcf.2 transforming sequence-like
mm39_v1_chr15_-_99149810_99149849	0.223266	Sp2	ENSMUST00000163506.3|Mcrs1|ENSMUSG00000037570.17|microspherule protein 1	ENSMUST00000229671.2|Mcrs1|ENSMUSG00000037570.17|microspherule protein 1	ENSMUST00000229359.2|Mcrs1|ENSMUSG00000037570.17|microspherule protein 1	ENSMUST00000041190.17|Mcrs1|ENSMUSG00000037570.17|microspherule protein 1
mm39_v1_chr15_+_100513230_100513230	0.22304	Sp2	ENSMUST00000000356.10|Dazap2|ENSMUSG00000000346.10|DAZ associated protein 2
mm39_v1_chr18_+_35731735_35731751	0.221784	Sp2	ENSMUST00000236868.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2
mm39_v1_chr13_+_14238361_14238407	0.216682	Sp2	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chr15_-_76116754_76116823	0.212949	Sp2	ENSMUST00000166428.8|Plec|ENSMUSG00000022565.16|plectin
mm39_v1_chr9_-_63306497_63306544	0.212091	Sp2	ENSMUST00000168665.3|2300009A05Rik|ENSMUSG00000032403.9|RIKEN cDNA 2300009A05 gene
mm39_v1_chr3_+_107803137_107803164	0.211456	Sp2	ENSMUST00000004134.11|Gstm5|ENSMUSG00000004032.11|glutathione S-transferase, mu 5
mm39_v1_chr11_+_79980210_79980243	0.208731	Sp2	ENSMUST00000017694.7|Atad5|ENSMUSG00000017550.15|ATPase family, AAA domain containing 5	ENSMUST00000108239.7|Atad5|ENSMUSG00000017550.15|ATPase family, AAA domain containing 5
mm39_v1_chr17_+_34174782_34174793	0.207595	Sp2	ENSMUST00000025178.17|Vps52|ENSMUSG00000024319.19|VPS52 GARP complex subunit
mm39_v1_chr10_+_127216668_127216747	0.207213	Sp2	ENSMUST00000111628.9|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr1_-_177085736_177085780	0.206191	Sp2	ENSMUST00000111159.2|Akt3|ENSMUSG00000019699.17|thymoma viral proto-oncogene 3
mm39_v1_chr2_+_30176395_30176409	0.204637	Sp2	ENSMUST00000064447.12|Nup188|ENSMUSG00000052533.15|nucleoporin 188
mm39_v1_chr4_-_107035479_107035536	0.203839	Sp2	ENSMUST00000058585.14|Tceanc2|ENSMUSG00000028619.16|transcription elongation factor A (SII) N-terminal and central domain containing 2
mm39_v1_chr9_+_109704609_109704684	0.203817	Sp2	ENSMUST00000094324.8|Cdc25a|ENSMUSG00000032477.15|cell division cycle 25A
mm39_v1_chrX_+_9066105_9066147	0.20258	Sp2	ENSMUST00000069763.3|Lancl3|ENSMUSG00000047344.10|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm39_v1_chr11_+_77873535_77873649	0.199372	Sp2	ENSMUST00000108360.8|Phf12|ENSMUSG00000037791.16|PHD finger protein 12	ENSMUST00000049167.14|Phf12|ENSMUSG00000037791.16|PHD finger protein 12
mm39_v1_chr5_+_143355815_143355847	0.199051	Sp2	ENSMUST00000120825.2|Grid2ip|ENSMUSG00000010825.18|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
mm39_v1_chr1_+_74640706_74640798	0.197034	Sp2	ENSMUST00000087186.11|Stk36|ENSMUSG00000033276.19|serine/threonine kinase 36
mm39_v1_chr10_+_128173603_128173628	0.194638	Sp2	ENSMUST00000005826.9|Cs|ENSMUSG00000005683.9|citrate synthase
mm39_v1_chr16_+_37909363_37909426	0.191393	Sp2	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr7_-_44635740_44635780	0.18961	Sp2	ENSMUST00000209056.3|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000209124.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000208312.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000207659.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000045325.14|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1
mm39_v1_chr18_-_66155651_66155671	0.18866	Sp2	ENSMUST00000143990.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chrX_+_101048650_101048681	0.187215	Sp2	ENSMUST00000144753.2|Nhsl2|ENSMUSG00000079481.12|NHS-like 2
mm39_v1_chr9_+_59658156_59658205	0.185697	Sp2	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr11_-_115078653_115078670	0.181526	Sp2	ENSMUST00000103041.8|Nat9|ENSMUSG00000015542.18|N-acetyltransferase 9 (GCN5-related, putative)
mm39_v1_chr4_+_128548479_128548531	0.180467	Sp2	ENSMUST00000030588.13|Phc2|ENSMUSG00000028796.18|polyhomeotic 2	ENSMUST00000136377.8|Phc2|ENSMUSG00000028796.18|polyhomeotic 2
mm39_v1_chr7_-_25358406_25358406	0.179708	Sp2	ENSMUST00000071329.8|Bckdha|ENSMUSG00000060376.8|branched chain ketoacid dehydrogenase E1, alpha polypeptide
mm39_v1_chr4_-_108263873_108263943	0.179669	Sp2	ENSMUST00000184609.2|Gpx7|ENSMUSG00000028597.12|glutathione peroxidase 7
mm39_v1_chr14_+_118374511_118374590	0.179303	Sp2	ENSMUST00000022728.4|Gpr180|ENSMUSG00000022131.4|G protein-coupled receptor 180
mm39_v1_chr18_+_39126178_39126240	0.178367	Sp2	ENSMUST00000097593.9|Arhgap26|ENSMUSG00000036452.19|Rho GTPase activating protein 26
mm39_v1_chr14_+_73411249_73411324	0.178143	Sp2	ENSMUST00000166875.2|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chrX_+_20554618_20554720	0.176617	Sp2	ENSMUST00000033380.7|Cdk16|ENSMUSG00000031065.15|cyclin-dependent kinase 16
mm39_v1_chr19_+_46385448_46385473	0.175795	Sp2	ENSMUST00000118440.3|Sufu|ENSMUSG00000025231.18|SUFU negative regulator of hedgehog signaling
mm39_v1_chr3_+_75464837_75464869	0.17447	Sp2	ENSMUST00000161776.8|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1	ENSMUST00000029423.9|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm39_v1_chr17_+_27192135_27192193	0.173882	Sp2	ENSMUST00000120016.3|Zbtb9|ENSMUSG00000079605.6|zinc finger and BTB domain containing 9
mm39_v1_chr3_-_41037427_41037481	0.17336	Sp2	ENSMUST00000058578.8|Pgrmc2|ENSMUSG00000049940.8|progesterone receptor membrane component 2
mm39_v1_chr1_+_128171859_128171912	0.173154	Sp2	ENSMUST00000027592.6|Ubxn4|ENSMUSG00000026353.10|UBX domain protein 4
mm39_v1_chr8_+_85696396_85696449	0.171238	Sp2	ENSMUST00000109733.8|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2
mm39_v1_chr2_-_66465296_66465296	0.170919	Sp2	ENSMUST00000100064.9|Scn9a|ENSMUSG00000075316.12|sodium channel, voltage-gated, type IX, alpha	ENSMUST00000100063.9|Scn9a|ENSMUSG00000075316.12|sodium channel, voltage-gated, type IX, alpha
mm39_v1_chr4_+_148123554_148123648	0.169439	Sp2	ENSMUST00000141283.8|Mthfr|ENSMUSG00000029009.18|methylenetetrahydrofolate reductase
mm39_v1_chr3_+_107803563_107803630	0.169241	Sp2	ENSMUST00000169365.2|Gstm5|ENSMUSG00000004032.11|glutathione S-transferase, mu 5
mm39_v1_chr9_-_61821820_61821856	0.169023	Sp2	ENSMUST00000008036.9|Rplp1|ENSMUSG00000007892.9|ribosomal protein, large, P1
mm39_v1_chrX_-_167456828_167456906	0.168713	Sp2	ENSMUST00000033725.16|Msl3|ENSMUSG00000031358.18|MSL complex subunit 3	ENSMUST00000112137.2|Msl3|ENSMUSG00000031358.18|MSL complex subunit 3
mm39_v1_chr15_-_25413784_25413831	0.168437	Sp2	ENSMUST00000228597.2|Basp1|ENSMUSG00000045763.9|brain abundant, membrane attached signal protein 1
mm39_v1_chr3_-_87702469_87702527	0.166975	Sp2	ENSMUST00000029712.5|Ntrk1|ENSMUSG00000028072.7|neurotrophic tyrosine kinase, receptor, type 1
mm39_v1_chr11_-_118931731_118931795	0.166624	Sp2	ENSMUST00000026663.8|Cbx8|ENSMUSG00000025578.10|chromobox 8
mm39_v1_chr6_-_143045493_143045583	0.165888	Sp2	ENSMUST00000204655.3|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000111758.9|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5
mm39_v1_chr5_-_124563611_124563631	0.165835	Sp2	ENSMUST00000198420.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chr2_+_5956251_5956284	0.163875	Sp2	ENSMUST00000060092.13|Upf2|ENSMUSG00000043241.15|UPF2 regulator of nonsense transcripts homolog (yeast)
mm39_v1_chr9_-_65815958_65816098	0.162585	Sp2	ENSMUST00000119245.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4	ENSMUST00000134338.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4	ENSMUST00000179395.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4
mm39_v1_chrX_-_37653396_37653432	0.162204	Sp2	ENSMUST00000016681.15|Cul4b|ENSMUSG00000031095.16|cullin 4B
mm39_v1_chr4_-_126057263_126057284	0.161326	Sp2	ENSMUST00000097891.4|Sh3d21|ENSMUSG00000073758.11|SH3 domain containing 21
mm39_v1_chr9_-_4309426_4309504	0.160833	Sp2	ENSMUST00000051589.9|Aasdhppt|ENSMUSG00000025894.12|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm39_v1_chr16_-_56537808_56537820	0.159475	Sp2	ENSMUST00000065515.14|Tfg|ENSMUSG00000022757.20|Trk-fused gene
mm39_v1_chr6_-_38852899_38852919	0.159432	Sp2	ENSMUST00000160360.2|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chrX_-_35909011_35909067	0.159034	Sp2	ENSMUST00000051906.13|Akap17b|ENSMUSG00000059708.13|A kinase (PRKA) anchor protein 17B
mm39_v1_chr4_-_129083251_129083305	0.158067	Sp2	ENSMUST00000117965.8|S100pbp|ENSMUSG00000040928.16|S100P binding protein
mm39_v1_chr2_+_32178325_32178367	0.15656	Sp2	ENSMUST00000100194.10|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000131712.9|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000081670.14|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000147707.8|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000129193.3|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2
mm39_v1_chr16_+_51851948_51852009	0.155543	Sp2	ENSMUST00000226593.2|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr7_-_101859308_101859364	0.154226	Sp2	ENSMUST00000070165.7|Nup98|ENSMUSG00000063550.9|nucleoporin 98	ENSMUST00000211235.2|Nup98|ENSMUSG00000063550.9|nucleoporin 98	ENSMUST00000211022.2|Nup98|ENSMUSG00000063550.9|nucleoporin 98
mm39_v1_chr2_-_30364219_30364239	0.153984	Sp2	ENSMUST00000065134.4|Ier5l|ENSMUSG00000089762.4|immediate early response 5-like
mm39_v1_chr7_+_127376267_127376324	0.15318	Sp2	ENSMUST00000144406.8|Setd1a|ENSMUSG00000042308.15|SET domain containing 1A
mm39_v1_chr11_-_62539284_62539349	0.150425	Sp2	ENSMUST00000057194.9|Lrrc75a|ENSMUSG00000046417.15|leucine rich repeat containing 75A
mm39_v1_chrX_-_149595873_149596150	0.148946	Sp2	ENSMUST00000131241.2|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000147152.3|Maged2|ENSMUSG00000025268.16|MAGE family member D2	ENSMUST00000143843.8|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr6_+_146479357_146479448	0.14767	Sp2	ENSMUST00000067404.13|Fgfr1op2|ENSMUSG00000040242.15|FGFR1 oncogene partner 2	ENSMUST00000111663.9|Fgfr1op2|ENSMUSG00000040242.15|FGFR1 oncogene partner 2	ENSMUST00000058245.5|Fgfr1op2|ENSMUSG00000040242.15|FGFR1 oncogene partner 2
mm39_v1_chr15_-_5273645_5273656	0.144974	Sp2	ENSMUST00000120563.2|Ptger4|ENSMUSG00000039942.16|prostaglandin E receptor 4 (subtype EP4)
mm39_v1_chrX_-_149595711_149595801	0.1383	Sp2	ENSMUST00000112697.10|Maged2|ENSMUSG00000025268.16|MAGE family member D2
mm39_v1_chr7_-_117842892_117842908	0.138205	Sp2	ENSMUST00000179047.3|Smg1|ENSMUSG00000030655.16|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm39_v1_chr19_+_44994094_44994145	0.137768	Sp2	ENSMUST00000236685.2|Twnk|ENSMUSG00000025209.6|twinkle mtDNA helicase
mm39_v1_chr2_-_66464997_66464997	0.137424	Sp2	ENSMUST00000164384.9|Scn9a|ENSMUSG00000075316.12|sodium channel, voltage-gated, type IX, alpha	ENSMUST00000169900.8|Scn9a|ENSMUSG00000075316.12|sodium channel, voltage-gated, type IX, alpha	ENSMUST00000112354.3|Scn9a|ENSMUSG00000075316.12|sodium channel, voltage-gated, type IX, alpha
mm39_v1_chrX_-_149371067_149371150	0.13616	Sp2	ENSMUST00000140207.8|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2	ENSMUST00000112719.2|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2	ENSMUST00000112727.10|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2	ENSMUST00000112721.10|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2	ENSMUST00000026303.16|Apex2|ENSMUSG00000025269.17|apurinic/apyrimidinic endonuclease 2
mm39_v1_chr19_-_3625698_3625756	0.135619	Sp2	ENSMUST00000172362.3|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000025846.16|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000226109.2|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000113997.9|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3
mm39_v1_chr7_-_101582987_101583104	0.135498	Sp2	ENSMUST00000106964.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106963.2|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000078448.11|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106966.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51
mm39_v1_chr19_-_12478803_12478818	0.128536	Sp2	ENSMUST00000045521.9|Dtx4|ENSMUSG00000039982.9|deltex 4, E3 ubiquitin ligase
mm39_v1_chr18_+_36868084_36868128	0.127601	Sp2	ENSMUST00000007046.9|Tmco6|ENSMUSG00000006850.9|transmembrane and coiled-coil domains 6	ENSMUST00000237870.2|Tmco6|ENSMUSG00000006850.9|transmembrane and coiled-coil domains 6
mm39_v1_chr10_-_122912272_122912410	0.12677	Sp2	ENSMUST00000219203.2|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking	ENSMUST00000073792.11|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking
mm39_v1_chr3_+_138148846_138148936	0.126436	Sp2	ENSMUST00000005964.7|Adh5|ENSMUSG00000028138.9|alcohol dehydrogenase 5 (class III), chi polypeptide
mm39_v1_chr12_-_102709884_102709947	0.126371	Sp2	ENSMUST00000173760.9|Moap1|ENSMUSG00000096458.8|modulator of apoptosis 1	ENSMUST00000178384.2|Moap1|ENSMUSG00000096458.8|modulator of apoptosis 1
mm39_v1_chr6_+_51447613_51447726	0.125818	Sp2	ENSMUST00000114445.8|Cbx3|ENSMUSG00000029836.16|chromobox 3	ENSMUST00000114446.8|Cbx3|ENSMUSG00000029836.16|chromobox 3	ENSMUST00000141711.3|Cbx3|ENSMUSG00000029836.16|chromobox 3
mm39_v1_chr10_-_80413119_80413161	0.125296	Sp2	ENSMUST00000038558.9|Klf16|ENSMUSG00000035397.9|Kruppel-like factor 16
mm39_v1_chr5_-_124563636_124563673	0.122709	Sp2	ENSMUST00000196711.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1	ENSMUST00000200474.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1	ENSMUST00000199808.5|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chr2_+_30872362_30872441	0.121774	Sp2	ENSMUST00000061544.11|Usp20|ENSMUSG00000026854.17|ubiquitin specific peptidase 20	ENSMUST00000138161.8|Usp20|ENSMUSG00000026854.17|ubiquitin specific peptidase 20	ENSMUST00000142232.2|Usp20|ENSMUSG00000026854.17|ubiquitin specific peptidase 20
mm39_v1_chr14_+_55815580_55815641	0.121579	Sp2	ENSMUST00000174484.8|Psme1|ENSMUSG00000022216.18|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
mm39_v1_chr6_+_86381201_86381222	0.119719	Sp2	ENSMUST00000095754.10|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000095753.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr3_-_90416757_90416813	0.118232	Sp2	ENSMUST00000107343.8|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000001043.14|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000107344.8|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000076639.11|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000107346.8|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000146740.8|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000107342.2|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1	ENSMUST00000049937.13|Chtop|ENSMUSG00000001017.16|chromatin target of PRMT1
mm39_v1_chr5_-_124563969_124564011	0.117477	Sp2	ENSMUST00000065263.12|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chr14_-_33169099_33169138	0.110461	Sp2	ENSMUST00000111944.10|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000022504.12|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000111945.9|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8
mm39_v1_chr11_-_101066266_101066270	0.109986	Sp2	ENSMUST00000062759.4|Ccr10|ENSMUSG00000044052.4|chemokine (C-C motif) receptor 10
mm39_v1_chrX_+_6690410_6690425	0.109533	Sp2	ENSMUST00000145302.3|Dgkk|ENSMUSG00000062393.15|diacylglycerol kinase kappa
mm39_v1_chr5_+_120750804_120750804	0.10929	Sp2	ENSMUST00000031598.11|Ddx54|ENSMUSG00000029599.14|DEAD box helicase 54
mm39_v1_chr17_+_57556449_57556548	0.108113	Sp2	ENSMUST00000224947.2|Trip10|ENSMUSG00000019487.12|thyroid hormone receptor interactor 10	ENSMUST00000019631.11|Trip10|ENSMUSG00000019487.12|thyroid hormone receptor interactor 10	ENSMUST00000224885.2|Trip10|ENSMUSG00000019487.12|thyroid hormone receptor interactor 10	ENSMUST00000224152.2|Trip10|ENSMUSG00000019487.12|thyroid hormone receptor interactor 10
mm39_v1_chr12_-_91556761_91556783	0.107821	Sp2	ENSMUST00000021345.14|Gtf2a1|ENSMUSG00000020962.15|general transcription factor II A, 1
mm39_v1_chr17_-_25492832_25492888	0.102455	Sp2	ENSMUST00000172868.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I	ENSMUST00000172618.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr7_+_43446968_43447020	0.102027	Sp2	ENSMUST00000085461.4|Klk8|ENSMUSG00000064023.5|kallikrein related-peptidase 8	ENSMUST00000205537.2|Klk8|ENSMUSG00000064023.5|kallikrein related-peptidase 8
mm39_v1_chr14_-_21102487_21102592	0.101868	Sp2	ENSMUST00000154460.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit	ENSMUST00000130291.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit
mm39_v1_chr9_-_21709796_21709856	0.101793	Sp2	ENSMUST00000213691.2|Kank2|ENSMUSG00000032194.10|KN motif and ankyrin repeat domains 2
mm39_v1_chr17_-_86452564_86452606	0.10133	Sp2	ENSMUST00000095187.4|Srbd1|ENSMUSG00000024135.11|S1 RNA binding domain 1
mm39_v1_chr3_+_107803225_107803270	0.101106	Sp2	ENSMUST00000172247.8|Gstm5|ENSMUSG00000004032.11|glutathione S-transferase, mu 5	ENSMUST00000167387.8|Gstm5|ENSMUSG00000004032.11|glutathione S-transferase, mu 5
mm39_v1_chr17_+_87415049_87415129	0.100495	Sp2	ENSMUST00000041369.8|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5	ENSMUST00000234803.2|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5
mm39_v1_chr11_+_105927698_105927716	0.0995027	Sp2	ENSMUST00000058438.9|Dcaf7|ENSMUSG00000049354.9|DDB1 and CUL4 associated factor 7
mm39_v1_chr6_+_86381318_86381362	0.0986568	Sp2	ENSMUST00000113713.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr7_+_103868004_103868056	0.0981466	Sp2	ENSMUST00000144455.2|Trim6|ENSMUSG00000072244.12|tripartite motif-containing 6
mm39_v1_chr17_-_57338468_57338538	0.0975296	Sp2	ENSMUST00000007814.10|Khsrp|ENSMUSG00000007670.11|KH-type splicing regulatory protein	ENSMUST00000233480.2|Khsrp|ENSMUSG00000007670.11|KH-type splicing regulatory protein
mm39_v1_chr4_+_107736942_107736994	0.0975008	Sp2	ENSMUST00000030348.6|Magoh|ENSMUSG00000028609.7|mago homolog, exon junction complex core component
mm39_v1_chr7_+_83281193_83281230	0.0965063	Sp2	ENSMUST00000117410.2|Stard5|ENSMUSG00000046027.18|StAR-related lipid transfer (START) domain containing 5
mm39_v1_chr19_+_10502679_10502768	0.0948482	Sp2	ENSMUST00000235674.2|Cpsf7|ENSMUSG00000034820.5|cleavage and polyadenylation specific factor 7
mm39_v1_chr2_+_30697838_30698012	0.0945896	Sp2	ENSMUST00000041830.10|Ntmt1|ENSMUSG00000026857.10|N-terminal Xaa-Pro-Lys N-methyltransferase 1	ENSMUST00000152374.8|Ntmt1|ENSMUSG00000026857.10|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm39_v1_chr8_+_85696216_85696282	0.0939186	Sp2	ENSMUST00000109734.8|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2	ENSMUST00000005292.15|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2
mm39_v1_chr2_-_32271833_32271920	0.0932958	Sp2	ENSMUST00000146423.2|1110008P14Rik|ENSMUSG00000039195.5|RIKEN cDNA 1110008P14 gene
mm39_v1_chr2_+_181139016_181139037	0.089119	Sp2	ENSMUST00000108799.10|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr13_-_97274360_97274424	0.0887961	Sp2	ENSMUST00000225410.2|Nsa2|ENSMUSG00000060739.9|NSA2 ribosome biogenesis homolog
mm39_v1_chr6_-_124391994_124392037	0.0887365	Sp2	ENSMUST00000035861.6|Pex5|ENSMUSG00000005069.13|peroxisomal biogenesis factor 5	ENSMUST00000112532.8|Pex5|ENSMUSG00000005069.13|peroxisomal biogenesis factor 5	ENSMUST00000080557.12|Pex5|ENSMUSG00000005069.13|peroxisomal biogenesis factor 5
mm39_v1_chr17_+_34174797_34174900	0.0886277	Sp2	ENSMUST00000173196.3|Vps52|ENSMUSG00000024319.19|VPS52 GARP complex subunit
mm39_v1_chr11_+_97206542_97206734	0.088094	Sp2	ENSMUST00000019026.10|Mrpl45|ENSMUSG00000018882.13|mitochondrial ribosomal protein L45	ENSMUST00000132168.2|Mrpl45|ENSMUSG00000018882.13|mitochondrial ribosomal protein L45
mm39_v1_chr5_-_100648487_100648526	0.0872694	Sp2	ENSMUST00000239512.1|LIN54|ENSMUSG00000118665.1|lin-54 homolog (C. elegans)
mm39_v1_chr5_+_110324734_110324760	0.0848509	Sp2	ENSMUST00000139611.8|Golga3|ENSMUSG00000029502.15|golgi autoantigen, golgin subfamily a, 3	ENSMUST00000031477.9|Golga3|ENSMUSG00000029502.15|golgi autoantigen, golgin subfamily a, 3
mm39_v1_chr8_+_85696453_85696490	0.0833126	Sp2	ENSMUST00000125893.8|Prdx2|ENSMUSG00000005161.16|peroxiredoxin 2
mm39_v1_chr15_-_31367872_31367936	0.0819329	Sp2	ENSMUST00000123325.9|Ankrd33b|ENSMUSG00000022237.18|ankyrin repeat domain 33B
mm39_v1_chr18_+_60907698_60907753	0.0808669	Sp2	ENSMUST00000118551.8|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr4_-_87951565_87951610	0.077177	Sp2	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr7_-_121666486_121666486	0.0760946	Sp2	ENSMUST00000033159.4|Ears2|ENSMUSG00000030871.12|glutamyl-tRNA synthetase 2, mitochondrial
mm39_v1_chr9_+_64718708_64718719	0.0732267	Sp2	ENSMUST00000213926.2|Dennd4a|ENSMUSG00000053641.10|DENN/MADD domain containing 4A
mm39_v1_chr11_+_70538083_70538120	0.0729684	Sp2	ENSMUST00000037534.8|Rnf167|ENSMUSG00000040746.16|ring finger protein 167
mm39_v1_chr17_-_15718542_15718601	0.0727807	Sp2	ENSMUST00000014913.11|Psmb1|ENSMUSG00000014769.11|proteasome (prosome, macropain) subunit, beta type 1	ENSMUST00000231341.2|Psmb1|ENSMUSG00000014769.11|proteasome (prosome, macropain) subunit, beta type 1
mm39_v1_chr11_-_73067828_73067873	0.0717644	Sp2	ENSMUST00000108480.2|Emc6|ENSMUSG00000047260.5|ER membrane protein complex subunit 6	ENSMUST00000054952.4|Emc6|ENSMUSG00000047260.5|ER membrane protein complex subunit 6
mm39_v1_chr6_-_143045731_143045836	0.0717497	Sp2	ENSMUST00000203673.3|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000203187.3|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000171349.8|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5	ENSMUST00000087485.7|C2cd5|ENSMUSG00000030279.16|C2 calcium-dependent domain containing 5
mm39_v1_chr2_+_181138958_181139009	0.0702865	Sp2	ENSMUST00000149163.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000000844.15|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000184849.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000108800.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000069712.9|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr7_+_58878532_58878573	0.0691676	Sp2	ENSMUST00000201794.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000202440.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000200758.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr3_-_68911807_68911832	0.0672107	Sp2	ENSMUST00000154741.8|Ift80|ENSMUSG00000027778.16|intraflagellar transport 80	ENSMUST00000148031.2|Ift80|ENSMUSG00000027778.16|intraflagellar transport 80
mm39_v1_chr8_+_108020132_108020191	0.0669461	Sp2	ENSMUST00000151114.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5	ENSMUST00000125721.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5	ENSMUST00000075922.11|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr17_-_24746911_24746924	0.0662836	Sp2	ENSMUST00000176652.8|Traf7|ENSMUSG00000052752.16|TNF receptor-associated factor 7
mm39_v1_chr15_+_79113341_79113373	0.0637427	Sp2	ENSMUST00000163571.8|Pick1|ENSMUSG00000068206.14|protein interacting with C kinase 1
mm39_v1_chr18_+_60907668_60907697	0.0621544	Sp2	ENSMUST00000025511.11|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr6_-_119825054_119825074	0.0602147	Sp2	ENSMUST00000079582.5|Erc1|ENSMUSG00000030172.16|ELKS/RAB6-interacting/CAST family member 1
mm39_v1_chr9_-_21874802_21874859	0.0600826	Sp2	ENSMUST00000006397.7|Epor|ENSMUSG00000006235.7|erythropoietin receptor
mm39_v1_chr4_+_126503611_126503689	0.0592235	Sp2	ENSMUST00000097886.4|5730409E04Rik|ENSMUSG00000073755.5|RIKEN cDNA 5730409E04Rik gene	ENSMUST00000164362.2|5730409E04Rik|ENSMUSG00000073755.5|RIKEN cDNA 5730409E04Rik gene
mm39_v1_chr7_+_109118345_109118363	0.0552495	Sp2	ENSMUST00000143107.2|Rpl27a|ENSMUSG00000046364.15|ribosomal protein L27A
mm39_v1_chrX_-_36349055_36349055	0.0537955	Sp2	ENSMUST00000115231.4|Rpl39|ENSMUSG00000079641.4|ribosomal protein L39
mm39_v1_chr8_+_107409765_107409786	0.0536599	Sp2	ENSMUST00000211979.2|Tango6|ENSMUSG00000041949.7|transport and golgi organization 6
mm39_v1_chr5_-_41921834_41921844	0.0530772	Sp2	ENSMUST00000060820.8|Nkx3-2|ENSMUSG00000049691.9|NK3 homeobox 2
mm39_v1_chr7_+_130972867_130972912	0.0522248	Sp2	ENSMUST00000075610.13|Pstk|ENSMUSG00000063179.14|phosphoseryl-tRNA kinase
mm39_v1_chr18_+_67422256_67422329	0.0499306	Sp2	ENSMUST00000025403.8|Impa2|ENSMUSG00000024525.8|inositol monophosphatase 2
mm39_v1_chr7_+_45573496_45573670	0.0472413	Sp2	ENSMUST00000210602.2|Odad1|ENSMUSG00000040189.19|outer dynein arm docking complex subunit 1	ENSMUST00000210039.3|Odad1|ENSMUSG00000040189.19|outer dynein arm docking complex subunit 1	ENSMUST00000211367.2|Odad1|ENSMUSG00000040189.19|outer dynein arm docking complex subunit 1
mm39_v1_chr1_-_155293075_155293104	0.0462481	Sp2	ENSMUST00000027741.12|Xpr1|ENSMUSG00000026469.15|xenotropic and polytropic retrovirus receptor 1
mm39_v1_chrX_+_7708034_7708106	0.0441278	Sp2	ENSMUST00000033494.16|Otud5|ENSMUSG00000031154.16|OTU domain containing 5	ENSMUST00000115666.8|Otud5|ENSMUSG00000031154.16|OTU domain containing 5
mm39_v1_chr2_-_109111064_109111112	0.041463	Sp2	ENSMUST00000147770.2|Mettl15|ENSMUSG00000057234.10|methyltransferase like 15
mm39_v1_chr6_+_37847721_37847892	0.0414314	Sp2	ENSMUST00000031859.14|Trim24|ENSMUSG00000029833.18|tripartite motif-containing 24	ENSMUST00000120428.8|Trim24|ENSMUSG00000029833.18|tripartite motif-containing 24
mm39_v1_chrX_-_9983836_9983948	0.0407868	Sp2	ENSMUST00000115543.3|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein	ENSMUST00000044789.10|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein	ENSMUST00000115544.9|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein
mm39_v1_chr17_-_46857199_46857314	0.0389569	Sp2	ENSMUST00000182485.8|Cul9|ENSMUSG00000040327.17|cullin 9	ENSMUST00000066026.8|Cul9|ENSMUSG00000040327.17|cullin 9
mm39_v1_chr13_+_42205790_42205880	0.0371226	Sp2	ENSMUST00000220525.2|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr4_+_154255187_154255263	0.0367642	Sp2	ENSMUST00000030897.15|Megf6|ENSMUSG00000057751.15|multiple EGF-like-domains 6
mm39_v1_chr4_+_88012836_88012892	0.0330153	Sp2	ENSMUST00000097992.10|Focad|ENSMUSG00000038368.17|focadhesin
mm39_v1_chr19_-_7360350_7360366	0.0327555	Sp2	ENSMUST00000025924.4|Spindoc|ENSMUSG00000024970.6|spindlin interactor and repressor of chromatin binding
mm39_v1_chr2_+_104420798_104420878	0.0322686	Sp2	ENSMUST00000028599.8|Cstf3|ENSMUSG00000027176.9|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm39_v1_chr8_-_55177510_55177539	0.0292493	Sp2	ENSMUST00000175915.8|Wdr17|ENSMUSG00000039375.17|WD repeat domain 17
mm39_v1_chr3_+_89987749_89987807	0.0259967	Sp2	ENSMUST00000127955.2|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma
mm39_v1_chr1_-_84817022_84817042	0.0252636	Sp2	ENSMUST00000189496.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000027421.13|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000186894.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr7_+_27207226_27207285	0.0248635	Sp2	ENSMUST00000125990.2|Prx|ENSMUSG00000053198.15|periaxin	ENSMUST00000065487.7|Prx|ENSMUSG00000053198.15|periaxin
mm39_v1_chr11_+_64326141_64326164	0.0236367	Sp2	ENSMUST00000058652.6|Hs3st3a1|ENSMUSG00000047759.7|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
mm39_v1_chr2_+_30872291_30872360	0.0234132	Sp2	ENSMUST00000102849.11|Usp20|ENSMUSG00000026854.17|ubiquitin specific peptidase 20
mm39_v1_chr11_+_115078299_115078393	0.0223789	Sp2	ENSMUST00000100235.9|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104	ENSMUST00000061450.7|Tmem104|ENSMUSG00000045980.14|transmembrane protein 104
mm39_v1_chr2_-_35939377_35939418	0.0218096	Sp2	ENSMUST00000070112.6|Ndufa8|ENSMUSG00000026895.8|NADH:ubiquinone oxidoreductase subunit A8
mm39_v1_chr7_+_109660887_109660950	0.0215951	Sp2	ENSMUST00000211798.2|Zfp143|ENSMUSG00000061079.15|zinc finger protein 143	ENSMUST00000084727.11|Zfp143|ENSMUSG00000061079.15|zinc finger protein 143	ENSMUST00000169638.4|Zfp143|ENSMUSG00000061079.15|zinc finger protein 143
mm39_v1_chr9_+_61280890_61280954	0.0193601	Sp2	ENSMUST00000161689.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr1_+_74640590_74640679	0.0189535	Sp2	ENSMUST00000087183.11|Stk36|ENSMUSG00000033276.19|serine/threonine kinase 36	ENSMUST00000148456.8|Stk36|ENSMUSG00000033276.19|serine/threonine kinase 36	ENSMUST00000113694.8|Stk36|ENSMUSG00000033276.19|serine/threonine kinase 36
mm39_v1_chr10_-_121933276_121933276	0.0170644	Sp2	ENSMUST00000140299.3|Rxylt1|ENSMUSG00000034620.18|ribitol xylosyltransferase 1
mm39_v1_chr1_-_162764787_162764787	0.00863589	Sp2	ENSMUST00000178465.3|Fmo6|ENSMUSG00000095576.6|flavin containing monooxygenase 6
mm39_v1_chr11_+_90140252_90140282	0.00831948	Sp2	ENSMUST00000107887.8|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr12_+_102710008_102710038	0.00736999	Sp2	ENSMUST00000057416.8|Tmem251|ENSMUSG00000046675.8|transmembrane protein 251
mm39_v1_chrX_+_7708295_7708371	0.00544081	Sp2	ENSMUST00000115667.10|Otud5|ENSMUSG00000031154.16|OTU domain containing 5	ENSMUST00000115668.10|Otud5|ENSMUSG00000031154.16|OTU domain containing 5	ENSMUST00000115665.2|Otud5|ENSMUSG00000031154.16|OTU domain containing 5
mm39_v1_chr17_+_29020744_29020798	0.00541956	Sp2	ENSMUST00000136233.2|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr1_-_179373826_179373842	0.00534969	Sp2	ENSMUST00000027769.6|Tfb2m|ENSMUSG00000026492.12|transcription factor B2, mitochondrial
mm39_v1_chr7_+_121666388_121666438	0.00365084	Sp2	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr1_+_93406686_93406783	0.00345729	Sp2	ENSMUST00000027495.15|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000136182.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000131175.9|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000179353.8|Septin2|ENSMUSG00000116048.2|septin 2	ENSMUST00000172165.8|Septin2|ENSMUSG00000116048.2|septin 2	ENSMUST00000153826.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000129211.8|Septin2|ENSMUSG00000026276.21|septin 2	ENSMUST00000168776.8|Septin2|ENSMUSG00000116048.2|septin 2
mm39_v1_chr9_+_14411956_14412182	0.00335191	Sp2	ENSMUST00000215143.2|Cwc15|ENSMUSG00000004096.10|CWC15 spliceosome-associated protein
mm39_v1_chr15_-_79658584_79658603	0.00124964	Sp2	ENSMUST00000069877.12|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4
mm39_v1_chr9_-_57552392_57552419	0.00103761	Sp2	ENSMUST00000216934.2|Csk|ENSMUSG00000032312.8|c-src tyrosine kinase
