mm39_v1_chr2_-_147888816_147888912	12.2611	T	ENSMUST00000172928.2|Foxa2|ENSMUSG00000037025.12|forkhead box A2	ENSMUST00000047315.10|Foxa2|ENSMUSG00000037025.12|forkhead box A2
mm39_v1_chr11_-_94283792_94283809	8.73677	T	ENSMUST00000178136.8|Abcc3|ENSMUSG00000020865.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	ENSMUST00000021231.8|Abcc3|ENSMUSG00000020865.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 3
mm39_v1_chr9_-_95727267_95727341	8.22956	T	ENSMUST00000093800.9|Pls1|ENSMUSG00000049493.14|plastin 1 (I-isoform)
mm39_v1_chr9_+_50405817_50405833	7.92998	T	ENSMUST00000114474.8|Plet1|ENSMUSG00000032068.15|placenta expressed transcript 1	ENSMUST00000188047.2|Plet1|ENSMUSG00000032068.15|placenta expressed transcript 1
mm39_v1_chr1_+_88034556_88034584	7.88569	T	ENSMUST00000113137.2|Ugt1a6b|ENSMUSG00000090145.8|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm39_v1_chr9_-_31375497_31375518	7.64054	T	ENSMUST00000217007.2|Tmem45b|ENSMUSG00000041737.9|transmembrane protein 45b	ENSMUST00000213807.2|Tmem45b|ENSMUSG00000041737.9|transmembrane protein 45b
mm39_v1_chrX_+_138511360_138511408	7.5599	T	ENSMUST00000113026.2|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr3_-_107851021_107851065	6.13878	T	ENSMUST00000106684.8|Gstm6|ENSMUSG00000068762.12|glutathione S-transferase, mu 6	ENSMUST00000106685.9|Gstm6|ENSMUSG00000068762.12|glutathione S-transferase, mu 6
mm39_v1_chr10_+_127541039_127541160	6.06918	T	ENSMUST00000079590.7|Myo1a|ENSMUSG00000025401.10|myosin IA
mm39_v1_chr17_+_35286293_35286366	5.96636	T	ENSMUST00000173478.2|Ly6g6c|ENSMUSG00000092586.9|lymphocyte antigen 6 complex, locus G6C	ENSMUST00000174876.2|Ly6g6c|ENSMUSG00000092586.9|lymphocyte antigen 6 complex, locus G6C
mm39_v1_chr15_-_76004395_76004395	5.81342	T	ENSMUST00000239552.1|EPPK1|ENSMUSG00000118671.1|epiplakin 1
mm39_v1_chr7_-_79492091_79492102	5.56618	T	ENSMUST00000049004.8|Anpep|ENSMUSG00000039062.16|alanyl (membrane) aminopeptidase
mm39_v1_chr9_-_99592058_99592075	5.50994	T	ENSMUST00000136429.8|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr1_+_171246593_171246620	5.4243	T	ENSMUST00000171362.2|Tstd1|ENSMUSG00000103711.2|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
mm39_v1_chr15_-_101759212_101759229	5.36969	T	ENSMUST00000023790.5|Krt1|ENSMUSG00000046834.8|keratin 1
mm39_v1_chr9_-_99592116_99592138	5.28475	T	ENSMUST00000035048.12|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr7_-_3680530_3680552	5.28408	T	ENSMUST00000038743.15|Tmc4|ENSMUSG00000019734.17|transmembrane channel-like gene family 4
mm39_v1_chr9_-_78263025_78263070	5.26212	T	ENSMUST00000125479.8|Gsta2|ENSMUSG00000057933.11|glutathione S-transferase, alpha 2 (Yc2)
mm39_v1_chr1_+_88066086_88066100	5.20338	T	ENSMUST00000014263.6|Ugt1a6a|ENSMUSG00000054545.18|UDP glucuronosyltransferase 1 family, polypeptide A6A
mm39_v1_chr6_+_40619913_40619937	4.63346	T	ENSMUST00000238599.2|Mgam|ENSMUSG00000068587.11|maltase-glucoamylase
mm39_v1_chr4_-_129121676_129121717	4.62084	T	ENSMUST00000106051.8|C77080|ENSMUSG00000050390.13|expressed sequence C77080
mm39_v1_chr8_+_46338498_46338531	4.56666	T	ENSMUST00000034053.7|Pdlim3|ENSMUSG00000031636.8|PDZ and LIM domain 3
mm39_v1_chr19_-_32080496_32080554	4.4761	T	ENSMUST00000235213.2|Asah2|ENSMUSG00000024887.11|N-acylsphingosine amidohydrolase 2	ENSMUST00000236504.2|Asah2|ENSMUSG00000024887.11|N-acylsphingosine amidohydrolase 2
mm39_v1_chr15_-_101588714_101588733	4.31663	T	ENSMUST00000023786.7|Krt6b|ENSMUSG00000023041.8|keratin 6B
mm39_v1_chr19_-_40260286_40260309	4.2962	T	ENSMUST00000182432.2|Pdlim1|ENSMUSG00000055044.13|PDZ and LIM domain 1 (elfin)
mm39_v1_chr5_+_73563418_73563611	4.29499	T	ENSMUST00000031040.13|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog	ENSMUST00000065543.8|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog
mm39_v1_chr10_-_43934774_43934879	4.2179	T	ENSMUST00000239010.2|Crybg1|ENSMUSG00000019866.16|crystallin beta-gamma domain containing 1
mm39_v1_chr8_+_46338557_46338577	4.18141	T	ENSMUST00000210422.2|Pdlim3|ENSMUSG00000031636.8|PDZ and LIM domain 3
mm39_v1_chr4_+_138559156_138559179	4.17716	T	ENSMUST00000077582.14|Pla2g2a|ENSMUSG00000058908.15|phospholipase A2, group IIA (platelets, synovial fluid)
mm39_v1_chr19_+_20579322_20579343	4.02378	T	ENSMUST00000087638.4|Aldh1a1|ENSMUSG00000053279.9|aldehyde dehydrogenase family 1, subfamily A1
mm39_v1_chr19_-_20704896_20704932	3.9794	T	ENSMUST00000025656.4|Aldh1a7|ENSMUSG00000024747.4|aldehyde dehydrogenase family 1, subfamily A7
mm39_v1_chr19_-_40260060_40260142	3.90619	T	ENSMUST00000068439.13|Pdlim1|ENSMUSG00000055044.13|PDZ and LIM domain 1 (elfin)
mm39_v1_chr4_-_129132963_129132988	3.78265	T	ENSMUST00000097873.10|C77080|ENSMUSG00000050390.13|expressed sequence C77080
mm39_v1_chr2_+_74512638_74512670	3.73043	T	ENSMUST00000142312.3|Hoxd11|ENSMUSG00000042499.14|homeobox D11
mm39_v1_chr16_+_93404719_93404784	3.72281	T	ENSMUST00000039659.9|Cbr1|ENSMUSG00000051483.10|carbonyl reductase 1	ENSMUST00000231762.2|Cbr1|ENSMUSG00000051483.10|carbonyl reductase 1
mm39_v1_chr6_-_94677118_94677157	3.46494	T	ENSMUST00000101126.3|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1	ENSMUST00000032105.11|Lrig1|ENSMUSG00000030029.15|leucine-rich repeats and immunoglobulin-like domains 1
mm39_v1_chr15_-_82291372_82291404	3.34513	T	ENSMUST00000230198.2|Cyp2d10|ENSMUSG00000094806.3|cytochrome P450, family 2, subfamily d, polypeptide 10	ENSMUST00000230248.2|Cyp2d10|ENSMUSG00000094806.3|cytochrome P450, family 2, subfamily d, polypeptide 10	ENSMUST00000072776.5|Cyp2d10|ENSMUSG00000094806.3|cytochrome P450, family 2, subfamily d, polypeptide 10	ENSMUST00000229911.2|Cyp2d10|ENSMUSG00000094806.3|cytochrome P450, family 2, subfamily d, polypeptide 10
mm39_v1_chr2_-_180844582_180844582	3.2851	T	ENSMUST00000016511.6|Ptk6|ENSMUSG00000038751.6|PTK6 protein tyrosine kinase 6
mm39_v1_chr9_-_9239056_9239106	3.21722	T	ENSMUST00000093893.12|Arhgap42|ENSMUSG00000050730.18|Rho GTPase activating protein 42
mm39_v1_chr15_-_101602734_101602753	3.07403	T	ENSMUST00000023788.8|Krt6a|ENSMUSG00000058354.8|keratin 6A
mm39_v1_chr8_-_34333573_34333699	2.64995	T	ENSMUST00000183062.2|Rbpms|ENSMUSG00000031586.18|RNA binding protein gene with multiple splicing
mm39_v1_chr12_-_113589576_113589657	2.61674	T	ENSMUST00000103446.2|Ighv5-6|ENSMUSG00000094951.2|immunoglobulin heavy variable 5-6
mm39_v1_chr5_+_24633206_24633241	2.587	T	ENSMUST00000115049.9|Slc4a2|ENSMUSG00000028962.15|solute carrier family 4 (anion exchanger), member 2
mm39_v1_chr16_-_32617783_32617833	2.56759	T	ENSMUST00000115116.8|Muc20|ENSMUSG00000035638.15|mucin 20	ENSMUST00000041123.9|Muc20|ENSMUSG00000035638.15|mucin 20
mm39_v1_chr1_+_132243849_132243883	2.52705	T	ENSMUST00000072177.14|Nuak2|ENSMUSG00000009772.16|NUAK family, SNF1-like kinase, 2	ENSMUST00000082125.6|Nuak2|ENSMUSG00000009772.16|NUAK family, SNF1-like kinase, 2
mm39_v1_chr1_-_71454041_71454074	2.5095	T	ENSMUST00000087268.7|Abca12|ENSMUSG00000050296.15|ATP-binding cassette, sub-family A (ABC1), member 12
mm39_v1_chr10_-_34294461_34294564	2.50092	T	ENSMUST00000213269.2|Nt5dc1|ENSMUSG00000039480.15|5'-nucleotidase domain containing 1	ENSMUST00000099973.4|Nt5dc1|ENSMUSG00000039480.15|5'-nucleotidase domain containing 1	ENSMUST00000105512.8|Nt5dc1|ENSMUSG00000039480.15|5'-nucleotidase domain containing 1	ENSMUST00000047885.14|Nt5dc1|ENSMUSG00000039480.15|5'-nucleotidase domain containing 1
mm39_v1_chr17_+_25588241_25588263	2.36949	T	ENSMUST00000160377.8|Tpsg1|ENSMUSG00000033200.17|tryptase gamma 1	ENSMUST00000160485.8|Tpsg1|ENSMUSG00000033200.17|tryptase gamma 1
mm39_v1_chr3_+_40905066_40905092	2.35306	T	ENSMUST00000191805.7|Larp1b|ENSMUSG00000025762.17|La ribonucleoprotein domain family, member 1B
mm39_v1_chr6_+_68026941_68026967	2.16506	T	ENSMUST00000103316.2|Igkv9-120|ENSMUSG00000094872.2|immunoglobulin kappa chain variable 9-120
mm39_v1_chr6_-_69800923_69800955	2.13883	T	ENSMUST00000103368.3|Igkv5-43|ENSMUSG00000094433.3|immunoglobulin kappa chain variable 5-43
mm39_v1_chr4_+_155648256_155648365	2.10397	T	ENSMUST00000143840.2|Nadk|ENSMUSG00000029063.17|NAD kinase	ENSMUST00000146080.8|Nadk|ENSMUSG00000029063.17|NAD kinase
mm39_v1_chrX_+_99669343_99669343	2.06196	T	ENSMUST00000048962.4|Kif4|ENSMUSG00000034311.4|kinesin family member 4
mm39_v1_chr14_+_80237691_80237749	2.01711	T	ENSMUST00000228749.2|Olfm4|ENSMUSG00000022026.8|olfactomedin 4	ENSMUST00000088735.4|Olfm4|ENSMUSG00000022026.8|olfactomedin 4
mm39_v1_chr3_+_40905216_40905254	1.97308	T	ENSMUST00000191872.6|Larp1b|ENSMUSG00000025762.17|La ribonucleoprotein domain family, member 1B	ENSMUST00000200432.2|Larp1b|ENSMUSG00000025762.17|La ribonucleoprotein domain family, member 1B
mm39_v1_chr2_-_51862941_51863037	1.9595	T	ENSMUST00000145481.8|Nmi|ENSMUSG00000026946.10|N-myc (and STAT) interactor	ENSMUST00000112705.9|Nmi|ENSMUSG00000026946.10|N-myc (and STAT) interactor
mm39_v1_chr12_+_119356318_119356318	1.76313	T	ENSMUST00000221866.2|Macc1|ENSMUSG00000041886.8|metastasis associated in colon cancer 1
mm39_v1_chr7_-_89166781_89166796	1.66249	T	ENSMUST00000041761.7|Prss23|ENSMUSG00000039405.8|protease, serine 23
mm39_v1_chr13_-_100382831_100382831	1.64765	T	ENSMUST00000049789.3|Naip5|ENSMUSG00000071203.7|NLR family, apoptosis inhibitory protein 5
mm39_v1_chr15_+_95688763_95688781	1.62029	T	ENSMUST00000227791.2|Ano6|ENSMUSG00000064210.8|anoctamin 6
mm39_v1_chr11_-_117670430_117670476	1.60417	T	ENSMUST00000143406.8|Tmc6|ENSMUSG00000025572.19|transmembrane channel-like gene family 6
mm39_v1_chr1_-_57010921_57011017	1.6007	T	ENSMUST00000114415.10|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr15_+_83447784_83447822	1.58596	T	ENSMUST00000047419.8|Tspo|ENSMUSG00000041736.8|translocator protein
mm39_v1_chr1_-_93373364_93373408	1.50934	T	ENSMUST00000190321.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000042498.14|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr11_-_61233647_61233694	1.47924	T	ENSMUST00000134423.3|Slc47a2|ENSMUSG00000069855.10|solute carrier family 47, member 2	ENSMUST00000093029.9|Slc47a2|ENSMUSG00000069855.10|solute carrier family 47, member 2
mm39_v1_chr1_-_93373145_93373158	1.42503	T	ENSMUST00000186787.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr2_-_51863203_51863236	1.39153	T	ENSMUST00000028314.9|Nmi|ENSMUSG00000026946.10|N-myc (and STAT) interactor
mm39_v1_chr9_-_43151179_43151208	1.36587	T	ENSMUST00000034512.7|Oaf|ENSMUSG00000032014.7|out at first homolog
mm39_v1_chr5_-_38649291_38649305	1.32543	T	ENSMUST00000129099.8|Slc2a9|ENSMUSG00000005107.14|solute carrier family 2 (facilitated glucose transporter), member 9
mm39_v1_chr12_-_113561594_113561603	1.32326	T	ENSMUST00000103444.3|Ighv5-4|ENSMUSG00000095612.3|immunoglobulin heavy variable 5-4
mm39_v1_chr7_-_89166724_89166773	1.31544	T	ENSMUST00000208888.2|Prss23|ENSMUSG00000039405.8|protease, serine 23
mm39_v1_chr15_+_79025523_79025558	1.29291	T	ENSMUST00000040077.8|Polr2f|ENSMUSG00000033020.8|polymerase (RNA) II (DNA directed) polypeptide F
mm39_v1_chr12_-_113700190_113700279	1.26749	T	ENSMUST00000103452.3|Ighv5-9-1|ENSMUSG00000095210.3|immunoglobulin heavy variable 5-9-1	ENSMUST00000192264.2|Ighv5-9-1|ENSMUSG00000095210.3|immunoglobulin heavy variable 5-9-1
mm39_v1_chr19_+_37686240_37686252	1.22863	T	ENSMUST00000025946.7|Cyp26a1|ENSMUSG00000024987.7|cytochrome P450, family 26, subfamily a, polypeptide 1
mm39_v1_chr11_+_78427219_78427318	1.21097	T	ENSMUST00000050366.15|Ift20|ENSMUSG00000001105.16|intraflagellar transport 20	ENSMUST00000108275.2|Ift20|ENSMUSG00000001105.16|intraflagellar transport 20
mm39_v1_chr17_+_84819260_84819342	1.1875	T	ENSMUST00000047206.7|Plekhh2|ENSMUSG00000040852.7|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm39_v1_chr14_-_75829389_75829433	1.15517	T	ENSMUST00000165569.3|Cby2|ENSMUSG00000034913.11|chibby family member 2	ENSMUST00000035243.5|Cby2|ENSMUSG00000034913.11|chibby family member 2
mm39_v1_chr9_+_121548893_121548912	1.14247	T	ENSMUST00000182337.2|Nktr|ENSMUSG00000032525.16|natural killer tumor recognition sequence
mm39_v1_chr4_+_53440389_53440467	1.13246	T	ENSMUST00000107646.9|Slc44a1|ENSMUSG00000028412.18|solute carrier family 44, member 1	ENSMUST00000102911.10|Slc44a1|ENSMUSG00000028412.18|solute carrier family 44, member 1
mm39_v1_chr5_+_110434172_110434256	1.08752	T	ENSMUST00000007296.12|Pole|ENSMUSG00000007080.15|polymerase (DNA directed), epsilon	ENSMUST00000112482.2|Pole|ENSMUSG00000007080.15|polymerase (DNA directed), epsilon
mm39_v1_chr16_+_84631789_84631843	1.04686	T	ENSMUST00000114184.8|Gabpa|ENSMUSG00000008976.17|GA repeat binding protein, alpha
mm39_v1_chr12_-_113625906_113625929	1.02583	T	ENSMUST00000103448.3|Ighv5-9|ENSMUSG00000095285.3|immunoglobulin heavy variable 5-9
mm39_v1_chr6_+_52691204_52691427	1.00794	T	ENSMUST00000138040.8|Tax1bp1|ENSMUSG00000004535.13|Tax1 (human T cell leukemia virus type I) binding protein 1	ENSMUST00000129660.2|Tax1bp1|ENSMUSG00000004535.13|Tax1 (human T cell leukemia virus type I) binding protein 1
mm39_v1_chr7_-_30335277_30335277	0.998368	T	ENSMUST00000108147.3|Etv2|ENSMUSG00000006311.9|ets variant 2
mm39_v1_chr6_+_139987275_139987288	0.997497	T	ENSMUST00000043797.6|Capza3|ENSMUSG00000041791.7|capping protein (actin filament) muscle Z-line, alpha 3
mm39_v1_chr15_+_95688712_95688755	0.932724	T	ENSMUST00000071874.8|Ano6|ENSMUSG00000064210.8|anoctamin 6
mm39_v1_chr9_-_107166543_107166621	0.931117	T	ENSMUST00000192054.2|Mapkapk3|ENSMUSG00000032577.17|mitogen-activated protein kinase-activated protein kinase 3
mm39_v1_chr2_+_154975419_154975479	0.908993	T	ENSMUST00000029126.15|Itch|ENSMUSG00000027598.17|itchy, E3 ubiquitin protein ligase	ENSMUST00000109685.8|Itch|ENSMUSG00000027598.17|itchy, E3 ubiquitin protein ligase
mm39_v1_chr7_-_141023199_141023278	0.902503	T	ENSMUST00000106005.9|Pidd1|ENSMUSG00000025507.14|p53 induced death domain protein 1
mm39_v1_chr8_-_15096046_15096092	0.898324	T	ENSMUST00000050493.4|BB014433|ENSMUSG00000049008.5|expressed sequence BB014433	ENSMUST00000123331.2|BB014433|ENSMUSG00000049008.5|expressed sequence BB014433
mm39_v1_chr7_+_140461860_140461895	0.894196	T	ENSMUST00000026560.14|Psmd13|ENSMUSG00000025487.16|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm39_v1_chr7_+_140462343_140462385	0.888205	T	ENSMUST00000163610.9|Psmd13|ENSMUSG00000025487.16|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	ENSMUST00000164681.8|Psmd13|ENSMUSG00000025487.16|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm39_v1_chr12_-_113823290_113823320	0.881209	T	ENSMUST00000103459.5|Ighv5-17|ENSMUSG00000095571.3|immunoglobulin heavy variable 5-17
mm39_v1_chr1_-_156767196_156767224	0.878812	T	ENSMUST00000185198.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr16_+_27207722_27207748	0.869406	T	ENSMUST00000039443.14|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000096127.11|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr10_+_23672842_23673098	0.865171	T	ENSMUST00000119597.8|Slc18b1|ENSMUSG00000037455.17|solute carrier family 18, subfamily B, member 1	ENSMUST00000179321.8|Slc18b1|ENSMUSG00000037455.17|solute carrier family 18, subfamily B, member 1	ENSMUST00000133289.2|Slc18b1|ENSMUSG00000037455.17|solute carrier family 18, subfamily B, member 1
mm39_v1_chr7_-_108529375_108529390	0.84917	T	ENSMUST00000055745.5|Nlrp10|ENSMUSG00000049709.5|NLR family, pyrin domain containing 10
mm39_v1_chr11_-_100628979_100629041	0.825373	T	ENSMUST00000155500.2|Rab5c|ENSMUSG00000019173.12|RAB5C, member RAS oncogene family	ENSMUST00000107364.8|Rab5c|ENSMUSG00000019173.12|RAB5C, member RAS oncogene family	ENSMUST00000019317.12|Rab5c|ENSMUSG00000019173.12|RAB5C, member RAS oncogene family
mm39_v1_chr7_-_71956332_71956395	0.823845	T	ENSMUST00000079323.8|Mctp2|ENSMUSG00000032776.10|multiple C2 domains, transmembrane 2
mm39_v1_chr11_-_78427061_78427158	0.810378	T	ENSMUST00000017759.9|Tnfaip1|ENSMUSG00000017615.13|tumor necrosis factor, alpha-induced protein 1 (endothelial)	ENSMUST00000108277.3|Tnfaip1|ENSMUSG00000017615.13|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm39_v1_chr1_-_13197387_13197473	0.807362	T	ENSMUST00000047577.7|Prdm14|ENSMUSG00000042414.8|PR domain containing 14
mm39_v1_chr7_+_89779564_89779724	0.803783	T	ENSMUST00000208742.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein	ENSMUST00000049537.9|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr19_+_34078333_34078399	0.793047	T	ENSMUST00000025685.8|Lipm|ENSMUSG00000056078.7|lipase, family member M
mm39_v1_chr16_-_4377640_4377718	0.777305	T	ENSMUST00000005862.9|Tfap4|ENSMUSG00000005718.9|transcription factor AP4
mm39_v1_chr5_+_100054110_100054175	0.775465	T	ENSMUST00000198837.3|Vamp9|ENSMUSG00000105078.3|vesicle-associated membrane protein 9
mm39_v1_chr2_+_74528071_74528097	0.761293	T	ENSMUST00000059272.10|Hoxd9|ENSMUSG00000043342.10|homeobox D9
mm39_v1_chr14_+_6226418_6226454	0.722126	T	ENSMUST00000112625.9|Oxsm|ENSMUSG00000021786.14|3-oxoacyl-ACP synthase, mitochondrial
mm39_v1_chr9_-_106421834_106421890	0.720952	T	ENSMUST00010181660.1|ENSMUSG00001074846.1|ENSMUSG00001074846.1|IQ motif containing F3	ENSMUST00000215525.2|ENSMUSG00000118396.3|ENSMUSG00000118396.3|IQ motif containing F3
mm39_v1_chr6_-_119444157_119444183	0.719876	T	ENSMUST00000118120.8|Wnt5b|ENSMUSG00000030170.15|wingless-type MMTV integration site family, member 5B
mm39_v1_chr9_-_119766580_119766631	0.700499	T	ENSMUST00000035099.9|Gorasp1|ENSMUSG00000032513.9|golgi reassembly stacking protein 1
mm39_v1_chr5_-_142892457_142892509	0.699945	T	ENSMUST00000167721.8|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000163829.2|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000100497.11|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr7_+_6200089_6200089	0.670342	T	ENSMUST00000037553.6|Galp|ENSMUSG00000034660.9|galanin-like peptide
mm39_v1_chr16_+_84631956_84632012	0.667279	T	ENSMUST00000009120.8|Gabpa|ENSMUSG00000008976.17|GA repeat binding protein, alpha
mm39_v1_chr10_+_21854540_21854589	0.645036	T	ENSMUST00000142174.8|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1	ENSMUST00000164659.8|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr13_-_21740190_21740190	0.639012	T	ENSMUST00000068163.2|Olfr1535|ENSMUSG00000054890.3|olfactory receptor 1535
mm39_v1_chr10_-_23977810_23977810	0.636715	T	ENSMUST00000170267.3|Taar8c|ENSMUSG00000100004.2|trace amine-associated receptor 8C
mm39_v1_chr18_-_43610829_43610868	0.63215	T	ENSMUST00000057110.11|Eif3j2|ENSMUSG00000043424.11|eukaryotic translation initiation factor 3, subunit J2
mm39_v1_chr17_+_84013575_84013634	0.627324	T	ENSMUST00000112350.8|Mta3|ENSMUSG00000055817.19|metastasis associated 3	ENSMUST00000112349.9|Mta3|ENSMUSG00000055817.19|metastasis associated 3	ENSMUST00000112352.10|Mta3|ENSMUSG00000055817.19|metastasis associated 3	ENSMUST00000067826.15|Mta3|ENSMUSG00000055817.19|metastasis associated 3
mm39_v1_chr10_+_128158328_128158362	0.6258	T	ENSMUST00000219037.2|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2	ENSMUST00000026446.4|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2
mm39_v1_chr15_+_79775894_79775905	0.616398	T	ENSMUST00000177483.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm39_v1_chr16_-_10614679_10614750	0.612924	T	ENSMUST00000023144.6|Prm1|ENSMUSG00000022501.7|protamine 1
mm39_v1_chr2_-_27138347_27138358	0.602804	T	ENSMUST00000139312.8|Sardh|ENSMUSG00000009614.17|sarcosine dehydrogenase
mm39_v1_chr14_-_21790463_21790503	0.596528	T	ENSMUST00000120984.9|Dusp13|ENSMUSG00000021768.16|dual specificity phosphatase 13
mm39_v1_chr11_+_83553400_83553420	0.592996	T	ENSMUST00000019074.4|Ccl4|ENSMUSG00000018930.4|chemokine (C-C motif) ligand 4
mm39_v1_chr18_-_36859732_36859851	0.590215	T	ENSMUST00000061829.8|Cd14|ENSMUSG00000051439.8|CD14 antigen
mm39_v1_chr7_-_119694400_119694535	0.557924	T	ENSMUST00000209154.3|Dnah3|ENSMUSG00000052273.5|dynein, axonemal, heavy chain 3	ENSMUST00000046993.4|Dnah3|ENSMUSG00000052273.5|dynein, axonemal, heavy chain 3
mm39_v1_chr7_+_43093507_43093574	0.547351	T	ENSMUST00000004729.5|Etfb|ENSMUSG00000004610.5|electron transferring flavoprotein, beta polypeptide	ENSMUST00000206286.2|Etfb|ENSMUSG00000004610.5|electron transferring flavoprotein, beta polypeptide	ENSMUST00000206196.2|Etfb|ENSMUSG00000004610.5|electron transferring flavoprotein, beta polypeptide	ENSMUST00000206411.2|Etfb|ENSMUSG00000004610.5|electron transferring flavoprotein, beta polypeptide
mm39_v1_chr9_-_53521585_53521682	0.539488	T	ENSMUST00000034547.6|Acat1|ENSMUSG00000032047.6|acetyl-Coenzyme A acetyltransferase 1
mm39_v1_chr4_-_82778066_82778195	0.535684	T	ENSMUST00000107239.8|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr11_-_86435579_86435631	0.50053	T	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chr15_-_98155173_98155193	0.472842	T	ENSMUST00000060855.7|H1f7|ENSMUSG00000048077.7|H1.7 linker histone
mm39_v1_chr17_-_78991691_78991781	0.470083	T	ENSMUST00000145480.2|Strn|ENSMUSG00000024077.16|striatin, calmodulin binding protein
mm39_v1_chr10_-_13053733_13053771	0.460729	T	ENSMUST00000019954.6|Zc2hc1b|ENSMUSG00000019815.8|zinc finger, C2HC-type containing 1B
mm39_v1_chr9_-_69668204_69668222	0.451812	T	ENSMUST00000071281.5|Foxb1|ENSMUSG00000059246.5|forkhead box B1
mm39_v1_chr7_-_79443536_79443536	0.427585	T	ENSMUST00000032760.6|Mesp1|ENSMUSG00000030544.6|mesoderm posterior 1
mm39_v1_chr15_+_79775819_79775878	0.423863	T	ENSMUST00000177350.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm39_v1_chr15_-_60793115_60793137	0.407931	T	ENSMUST00000096418.5|A1bg|ENSMUSG00000022347.9|alpha-1-B glycoprotein
mm39_v1_chr2_-_125993887_125993929	0.407245	T	ENSMUST00000110448.3|Fam227b|ENSMUSG00000027209.18|family with sequence similarity 227, member B	ENSMUST00000110446.9|Fam227b|ENSMUSG00000027209.18|family with sequence similarity 227, member B
mm39_v1_chr11_+_78427181_78427194	0.401032	T	ENSMUST00000128788.8|Ift20|ENSMUSG00000001105.16|intraflagellar transport 20
mm39_v1_chr5_-_151510389_151510389	0.393996	T	ENSMUST00000165928.4|Vmn2r18|ENSMUSG00000091794.4|vomeronasal 2, receptor 18
mm39_v1_chr2_+_181134977_181135007	0.365688	T	ENSMUST00000069649.9|Abhd16b|ENSMUSG00000055882.9|abhydrolase domain containing 16B
mm39_v1_chr14_+_13803477_13803536	0.363965	T	ENSMUST00000102996.4|Cfap20dc|ENSMUSG00000021747.13|CFAP20 domain containing
mm39_v1_chr8_-_73246435_73246507	0.355477	T	ENSMUST00000152080.8|Slc35e1|ENSMUSG00000019731.14|solute carrier family 35, member E1
mm39_v1_chr4_+_52964547_52964564	0.354278	T	ENSMUST00000215010.2|Olfr270|ENSMUSG00000070983.4|olfactory receptor 270	ENSMUST00000215127.2|Olfr270|ENSMUSG00000070983.4|olfactory receptor 270
mm39_v1_chr5_-_108280350_108280404	0.353713	T	ENSMUST00000119784.2|Tmed5|ENSMUSG00000063406.12|transmembrane p24 trafficking protein 5	ENSMUST00000117759.2|Tmed5|ENSMUSG00000063406.12|transmembrane p24 trafficking protein 5
mm39_v1_chr9_+_37524966_37525153	0.334596	T	ENSMUST00000215474.2|Siae|ENSMUSG00000001942.9|sialic acid acetylesterase
mm39_v1_chr12_-_111933328_111933460	0.33077	T	ENSMUST00000222874.2|Atp5mpl|ENSMUSG00000021290.7|ATP synthase membrane subunit 6.8PL	ENSMUST00000223191.2|Atp5mpl|ENSMUSG00000021290.7|ATP synthase membrane subunit 6.8PL	ENSMUST00000021719.7|Atp5mpl|ENSMUSG00000021290.7|ATP synthase membrane subunit 6.8PL
mm39_v1_chr15_+_9335636_9335709	0.317796	T	ENSMUST00000072403.7|Ugt3a2|ENSMUSG00000049152.12|UDP glycosyltransferases 3 family, polypeptide A2
mm39_v1_chr1_+_44158111_44158169	0.288688	T	ENSMUST00000155917.8|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing
mm39_v1_chr11_+_29476385_29476420	0.273382	T	ENSMUST00000133452.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2
mm39_v1_chr8_+_114369838_114369864	0.262965	T	ENSMUST00000095173.3|Syce1l|ENSMUSG00000033409.15|synaptonemal complex central element protein 1 like	ENSMUST00000034219.12|Syce1l|ENSMUSG00000033409.15|synaptonemal complex central element protein 1 like	ENSMUST00000212269.2|Syce1l|ENSMUSG00000033409.15|synaptonemal complex central element protein 1 like
mm39_v1_chr10_+_88295515_88295532	0.229948	T	ENSMUST00000125612.2|Sycp3|ENSMUSG00000020059.10|synaptonemal complex protein 3
mm39_v1_chr14_+_54434705_54434705	0.223534	T	ENSMUST00000103719.2|Traj22|ENSMUSG00000076907.2|T cell receptor alpha joining 22
mm39_v1_chr12_-_113666198_113666282	0.220183	T	ENSMUST00000103450.4|Ighv5-12|ENSMUSG00000095429.2|immunoglobulin heavy variable 5-12
mm39_v1_chr1_-_86317066_86317151	0.213503	T	ENSMUST00000212058.2|Nmur1|ENSMUSG00000026237.7|neuromedin U receptor 1
mm39_v1_chr8_+_121262528_121262614	0.21053	T	ENSMUST00000120493.8|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr7_+_15246265_15246265	0.196199	T	ENSMUST00000172881.8|Obox1|ENSMUSG00000054310.17|oocyte specific homeobox 1
mm39_v1_chr4_+_146533480_146533480	0.192688	T	ENSMUST00000105733.3|Zfp992|ENSMUSG00000070605.5|zinc finger protein 992
mm39_v1_chr8_+_3520841_3520862	0.190511	T	ENSMUST00000047265.13|Tex45|ENSMUSG00000040340.14|testis expressed 45
mm39_v1_chr13_-_113317431_113317501	0.17184	T	ENSMUST00000038212.14|Gzmk|ENSMUSG00000042385.15|granzyme K
mm39_v1_chr8_-_83129832_83129856	0.162257	T	ENSMUST00000034148.7|Il15|ENSMUSG00000031712.11|interleukin 15
mm39_v1_chr6_+_90310252_90310278	0.157812	T	ENSMUST00000046128.12|Uroc1|ENSMUSG00000034456.16|urocanase domain containing 1	ENSMUST00000164761.6|Uroc1|ENSMUSG00000034456.16|urocanase domain containing 1
mm39_v1_chr11_+_87938626_87938655	0.142487	T	ENSMUST00000107920.10|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr2_+_129965195_129965213	0.126083	T	ENSMUST00000028888.5|Tgm6|ENSMUSG00000027403.13|transglutaminase 6
mm39_v1_chr15_+_79776597_79776683	0.121993	T	ENSMUST00000175714.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	ENSMUST00000109620.10|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	ENSMUST00000165537.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	ENSMUST00000175752.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	ENSMUST00000176325.8|Apobec3|ENSMUSG00000009585.19|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm39_v1_chr7_-_140462221_140462244	0.119625	T	ENSMUST00000026559.14|Sirt3|ENSMUSG00000025486.18|sirtuin 3
mm39_v1_chr2_+_164790139_164790165	0.113686	T	ENSMUST00000017881.3|Mmp9|ENSMUSG00000017737.3|matrix metallopeptidase 9
mm39_v1_chr16_-_88504848_88504853	0.106513	T	ENSMUST00000050882.4|2310061N02Rik|ENSMUSG00000050704.4|RIKEN cDNA 2310061N02 gene
mm39_v1_chr3_+_90138895_90138970	0.0988431	T	ENSMUST00000029546.15|Jtb|ENSMUSG00000027937.16|jumping translocation breakpoint	ENSMUST00000119304.2|Jtb|ENSMUSG00000027937.16|jumping translocation breakpoint
mm39_v1_chr3_-_103698391_103698639	0.0973182	T	ENSMUST00000106845.9|Hipk1|ENSMUSG00000008730.18|homeodomain interacting protein kinase 1	ENSMUST00000029438.15|Hipk1|ENSMUSG00000008730.18|homeodomain interacting protein kinase 1
mm39_v1_chr7_-_130931235_130931251	0.0913886	T	ENSMUST00000188899.2|Fam24b|ENSMUSG00000030858.11|family with sequence similarity 24 member B
mm39_v1_chr5_+_129924619_129924644	0.0903882	T	ENSMUST00000077320.3|Zbed5|ENSMUSG00000034173.14|zinc finger, BED type containing 5
mm39_v1_chr11_+_79551358_79551389	0.0822961	T	ENSMUST00000155381.2|Rab11fip4|ENSMUSG00000017639.14|RAB11 family interacting protein 4 (class II)
mm39_v1_chr6_-_139987135_139987192	0.0705167	T	ENSMUST00000032356.13|Plcz1|ENSMUSG00000030230.16|phospholipase C, zeta 1
mm39_v1_chr6_+_72281587_72281604	0.0609113	T	ENSMUST00000183018.8|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B	ENSMUST00000182014.10|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B
mm39_v1_chr5_+_129924564_129924617	0.0593929	T	ENSMUST00000041466.14|Zbed5|ENSMUSG00000034173.14|zinc finger, BED type containing 5
mm39_v1_chrX_-_142716085_142716149	0.0344253	T	ENSMUST00000087313.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr8_+_61085853_61085879	0.030179	T	ENSMUST00000161421.2|Mfap3l|ENSMUSG00000031647.11|microfibrillar-associated protein 3-like
mm39_v1_chr15_-_79025387_79025469	0.0130694	T	ENSMUST00000187550.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000188562.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190509.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190730.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000190959.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000169604.8|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene	ENSMUST00000186053.7|1700088E04Rik|ENSMUSG00000033029.13|RIKEN cDNA 1700088E04 gene
mm39_v1_chr7_-_15361801_15361801	0.0119363	T	ENSMUST00000086122.10|Obox3|ENSMUSG00000066772.13|oocyte specific homeobox 3	ENSMUST00000174443.8|Obox3|ENSMUSG00000066772.13|oocyte specific homeobox 3
mm39_v1_chrX_-_110446022_110446039	0.000625847	T	ENSMUST00000156639.2|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
