mm39_v1_chr6_-_41012435_41012448	5.50784	Twist1	ENSMUST00000031931.6|2210010C04Rik|ENSMUSG00000029882.6|RIKEN cDNA 2210010C04 gene
mm39_v1_chr6_+_30639217_30639217	4.84164	Twist1	ENSMUST00000031806.10|Cpa1|ENSMUSG00000054446.9|carboxypeptidase A1, pancreatic
mm39_v1_chr17_+_34029484_34029503	4.48912	Twist1	ENSMUST00000048560.11|Kank3|ENSMUSG00000042099.17|KN motif and ankyrin repeat domains 3	ENSMUST00000172649.8|Kank3|ENSMUSG00000042099.17|KN motif and ankyrin repeat domains 3	ENSMUST00000173789.2|Kank3|ENSMUSG00000042099.17|KN motif and ankyrin repeat domains 3
mm39_v1_chr2_+_71811526_71811631	4.04239	Twist1	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr11_-_46203047_46203185	3.72418	Twist1	ENSMUST00000129474.2|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000093166.11|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000165599.9|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2
mm39_v1_chr9_-_54569128_54569154	3.51749	Twist1	ENSMUST00000034822.12|Acsbg1|ENSMUSG00000032281.12|acyl-CoA synthetase bubblegum family member 1
mm39_v1_chr8_+_55024446_55024504	3.4328	Twist1	ENSMUST00000239166.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5	ENSMUST00000239106.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5	ENSMUST00000239152.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5
mm39_v1_chr19_-_11243530_11243605	3.2962	Twist1	ENSMUST00000169159.3|Ms4a1|ENSMUSG00000024673.10|membrane-spanning 4-domains, subfamily A, member 1
mm39_v1_chr5_+_8943943_8943955	3.22182	Twist1	ENSMUST00000196067.2|Abcb4|ENSMUSG00000042476.13|ATP-binding cassette, sub-family B (MDR/TAP), member 4
mm39_v1_chr4_+_155553571_155553599	3.20642	Twist1	ENSMUST00000178188.8|Tmem52|ENSMUSG00000023153.10|transmembrane protein 52	ENSMUST00000178238.8|Tmem52|ENSMUSG00000023153.10|transmembrane protein 52	ENSMUST00000023920.3|Tmem52|ENSMUSG00000023153.10|transmembrane protein 52
mm39_v1_chr8_-_106660470_106660494	3.11485	Twist1	ENSMUST00000034368.8|Ctrl|ENSMUSG00000031896.8|chymotrypsin-like
mm39_v1_chr8_+_93084253_93084379	2.58264	Twist1	ENSMUST00000210246.2|Irx5|ENSMUSG00000031737.12|Iroquois homeobox 5	ENSMUST00000034184.12|Irx5|ENSMUSG00000031737.12|Iroquois homeobox 5
mm39_v1_chr5_+_24569802_24569823	2.53775	Twist1	ENSMUST00000115090.6|Nos3|ENSMUSG00000028978.13|nitric oxide synthase 3, endothelial cell	ENSMUST00000030834.7|Nos3|ENSMUSG00000028978.13|nitric oxide synthase 3, endothelial cell
mm39_v1_chr19_+_5790918_5790937	2.41468	Twist1	ENSMUST00000081496.6|Ltbp3|ENSMUSG00000024940.12|latent transforming growth factor beta binding protein 3
mm39_v1_chrX_-_56371953_56372042	2.35728	Twist1	ENSMUST00000176986.8|Arhgef6|ENSMUSG00000031133.13|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr17_+_75772475_75772489	2.34029	Twist1	ENSMUST00000095204.6|Rasgrp3|ENSMUSG00000071042.13|RAS, guanyl releasing protein 3
mm39_v1_chr7_-_44174065_44174087	2.32725	Twist1	ENSMUST00000165208.4|Mybpc2|ENSMUSG00000038670.12|myosin binding protein C, fast-type
mm39_v1_chr9_-_54568950_54569001	2.30011	Twist1	ENSMUST00000128624.2|Acsbg1|ENSMUSG00000032281.12|acyl-CoA synthetase bubblegum family member 1
mm39_v1_chr11_-_113600346_113600354	2.25089	Twist1	ENSMUST00000173655.8|Cpsf4l|ENSMUSG00000018727.20|cleavage and polyadenylation specific factor 4-like	ENSMUST00000100248.6|Cpsf4l|ENSMUSG00000018727.20|cleavage and polyadenylation specific factor 4-like
mm39_v1_chr10_+_70080913_70080970	2.23074	Twist1	ENSMUST00000046807.7|Slc16a9|ENSMUSG00000037762.7|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm39_v1_chr11_+_109541400_109541405	2.22199	Twist1	ENSMUST00000106676.8|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chr8_-_78337297_78337351	2.16258	Twist1	ENSMUST00000141202.2|Tmem184c|ENSMUSG00000031617.17|transmembrane protein 184C	ENSMUST00000152168.8|Tmem184c|ENSMUSG00000031617.17|transmembrane protein 184C
mm39_v1_chr4_-_152122891_152123025	2.10044	Twist1	ENSMUST00000030792.2|Tas1r1|ENSMUSG00000028950.4|taste receptor, type 1, member 1
mm39_v1_chr13_-_58261406_58261469	2.08656	Twist1	ENSMUST00000160860.9|Klhl3|ENSMUSG00000014164.16|kelch-like 3
mm39_v1_chr4_-_123458465_123458494	2.03173	Twist1	ENSMUST00000238731.2|Macf1|ENSMUSG00000028649.22|microtubule-actin crosslinking factor 1
mm39_v1_chr15_-_100497863_100497920	2.0073	Twist1	ENSMUST00000073837.13|Pou6f1|ENSMUSG00000009739.18|POU domain, class 6, transcription factor 1
mm39_v1_chrX_-_100310959_100311040	2.00469	Twist1	ENSMUST00000135038.2|Il2rg|ENSMUSG00000031304.19|interleukin 2 receptor, gamma chain
mm39_v1_chr9_-_14815228_14815245	1.99083	Twist1	ENSMUST00000034409.14|Izumo1r|ENSMUSG00000031933.18|IZUMO1 receptor, JUNO	ENSMUST00000117620.8|Izumo1r|ENSMUSG00000031933.18|IZUMO1 receptor, JUNO
mm39_v1_chr16_-_59421342_59421423	1.88604	Twist1	ENSMUST00000172910.3|Crybg3|ENSMUSG00000022723.17|beta-gamma crystallin domain containing 3
mm39_v1_chr2_+_31777273_31777356	1.80929	Twist1	ENSMUST00000138325.8|Lamc3|ENSMUSG00000026840.15|laminin gamma 3	ENSMUST00000028187.7|Lamc3|ENSMUSG00000026840.15|laminin gamma 3
mm39_v1_chr18_-_16942289_16942384	1.73959	Twist1	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr9_+_65172455_65172468	1.69077	Twist1	ENSMUST00000048762.8|Cilp|ENSMUSG00000042254.15|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
mm39_v1_chr18_+_61044830_61044852	1.61644	Twist1	ENSMUST00000040359.6|Arsi|ENSMUSG00000036412.6|arylsulfatase i
mm39_v1_chr5_-_23880939_23881012	1.61516	Twist1	ENSMUST00000196388.5|Srpk2|ENSMUSG00000062604.12|serine/arginine-rich protein specific kinase 2
mm39_v1_chr4_-_152561896_152562046	1.61495	Twist1	ENSMUST00000238738.2|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2	ENSMUST00000162017.3|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2	ENSMUST00000030768.10|Kcnab2|ENSMUSG00000028931.13|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm39_v1_chr4_-_59915035_59915063	1.58354	Twist1	ENSMUST00000030081.2|Slc46a2|ENSMUSG00000028386.2|solute carrier family 46, member 2
mm39_v1_chr9_-_14815050_14815068	1.56399	Twist1	ENSMUST00000148155.2|Izumo1r|ENSMUSG00000031933.18|IZUMO1 receptor, JUNO	ENSMUST00000121116.8|Izumo1r|ENSMUSG00000031933.18|IZUMO1 receptor, JUNO
mm39_v1_chr7_-_126817639_126817670	1.53081	Twist1	ENSMUST00000152267.8|Septin1|ENSMUSG00000000486.14|septin 1	ENSMUST00000106314.8|Septin1|ENSMUSG00000000486.14|septin 1
mm39_v1_chr7_+_45067747_45067794	1.52291	Twist1	ENSMUST00000238638.2|Lhb|ENSMUSG00000118462.2|luteinizing hormone beta
mm39_v1_chr7_-_30814652_30814733	1.5023	Twist1	ENSMUST00000168884.8|Hpn|ENSMUSG00000001249.15|hepsin	ENSMUST00000108102.9|Hpn|ENSMUSG00000001249.15|hepsin
mm39_v1_chr5_-_35886605_35886630	1.48044	Twist1	ENSMUST00000070203.14|Sh3tc1|ENSMUSG00000036553.17|SH3 domain and tetratricopeptide repeats 1
mm39_v1_chr10_+_61010983_61011041	1.46654	Twist1	ENSMUST00000143207.8|Tbata|ENSMUSG00000020096.22|thymus, brain and testes associated	ENSMUST00000148181.8|Tbata|ENSMUSG00000020096.22|thymus, brain and testes associated	ENSMUST00000151886.8|Tbata|ENSMUSG00000020096.22|thymus, brain and testes associated
mm39_v1_chr10_-_126866682_126866710	1.45753	Twist1	ENSMUST00000040560.11|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial
mm39_v1_chr6_-_29164981_29165005	1.43922	Twist1	ENSMUST00000007993.16|Rbm28|ENSMUSG00000029701.16|RNA binding motif protein 28
mm39_v1_chr9_+_57037974_57038078	1.40417	Twist1	ENSMUST00000160147.8|Man2c1|ENSMUSG00000032295.16|mannosidase, alpha, class 2C, member 1	ENSMUST00000161663.8|Man2c1|ENSMUSG00000032295.16|mannosidase, alpha, class 2C, member 1	ENSMUST00000034836.16|Man2c1|ENSMUSG00000032295.16|mannosidase, alpha, class 2C, member 1	ENSMUST00000161182.8|Man2c1|ENSMUSG00000032295.16|mannosidase, alpha, class 2C, member 1
mm39_v1_chr5_+_31454787_31454932	1.3958	Twist1	ENSMUST00000201166.4|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein	ENSMUST00000072228.9|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein
mm39_v1_chr19_-_28941264_28941318	1.37025	Twist1	ENSMUST00000161813.2|Spata6l|ENSMUSG00000064202.16|spermatogenesis associated 6 like
mm39_v1_chr7_-_126817475_126817562	1.34077	Twist1	ENSMUST00000106313.8|Septin1|ENSMUSG00000000486.14|septin 1	ENSMUST00000142356.3|Septin1|ENSMUSG00000000486.14|septin 1
mm39_v1_chr13_+_73775001_73775056	1.33974	Twist1	ENSMUST00000022104.9|Tert|ENSMUSG00000021611.10|telomerase reverse transcriptase
mm39_v1_chr10_+_12936248_12936282	1.33776	Twist1	ENSMUST00000193426.6|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr6_-_124410452_124410474	1.30202	Twist1	ENSMUST00000124998.2|Clstn3|ENSMUSG00000008153.13|calsyntenin 3	ENSMUST00000238807.2|Clstn3|ENSMUSG00000008153.13|calsyntenin 3
mm39_v1_chr8_+_107237483_107237557	1.30165	Twist1	ENSMUST00000080797.8|Cdh3|ENSMUSG00000061048.9|cadherin 3
mm39_v1_chr8_+_123148759_123148759	1.29783	Twist1	ENSMUST00000050963.4|Il17c|ENSMUSG00000046108.4|interleukin 17C
mm39_v1_chr2_+_29509704_29509922	1.27752	Twist1	ENSMUST00000095087.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000091146.12|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000102872.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000147755.10|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr18_+_4920513_4920584	1.27264	Twist1	ENSMUST00000126977.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr9_-_44253630_44253678	1.27232	Twist1	ENSMUST00000097558.5|Hmbs|ENSMUSG00000032126.17|hydroxymethylbilane synthase
mm39_v1_chr12_+_4642987_4643091	1.26894	Twist1	ENSMUST00000062580.8|Itsn2|ENSMUSG00000020640.11|intersectin 2	ENSMUST00000220311.2|Itsn2|ENSMUSG00000020640.11|intersectin 2
mm39_v1_chr2_-_45007407_45007421	1.26203	Twist1	ENSMUST00000176438.9|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr10_-_126866658_126866681	1.26174	Twist1	ENSMUST00000120547.2|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial	ENSMUST00000152054.8|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial
mm39_v1_chr9_-_114673158_114673242	1.20839	Twist1	ENSMUST00000047013.4|Cmtm8|ENSMUSG00000041012.5|CKLF-like MARVEL transmembrane domain containing 8
mm39_v1_chr15_-_72932853_72932945	1.18541	Twist1	ENSMUST00000170633.9|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9	ENSMUST00000228960.2|Trappc9|ENSMUSG00000047921.18|trafficking protein particle complex 9
mm39_v1_chr9_-_44253588_44253610	1.16758	Twist1	ENSMUST00000215091.2|Hmbs|ENSMUSG00000032126.17|hydroxymethylbilane synthase
mm39_v1_chr11_-_68817875_68817923	1.16046	Twist1	ENSMUST00000038932.14|Odf4|ENSMUSG00000032921.14|outer dense fiber of sperm tails 4	ENSMUST00000125134.2|Odf4|ENSMUSG00000032921.14|outer dense fiber of sperm tails 4
mm39_v1_chr16_+_18630522_18630582	1.15619	Twist1	ENSMUST00000115578.10|Ufd1|ENSMUSG00000005262.14|ubiquitin recognition factor in ER-associated degradation 1
mm39_v1_chr11_-_113600838_113600849	1.14651	Twist1	ENSMUST00000018871.8|Cpsf4l|ENSMUSG00000018727.20|cleavage and polyadenylation specific factor 4-like
mm39_v1_chr15_-_89007290_89007378	1.13581	Twist1	ENSMUST00000109353.9|Tubgcp6|ENSMUSG00000051786.16|tubulin, gamma complex associated protein 6
mm39_v1_chr11_+_87628356_87628419	1.13534	Twist1	ENSMUST00000093955.12|Supt4a|ENSMUSG00000020485.15|SPT4A, DSIF elongation factor subunit
mm39_v1_chr2_-_65068917_65068953	1.12566	Twist1	ENSMUST00000090896.10|Cobll1|ENSMUSG00000034903.19|Cobl-like 1	ENSMUST00000155082.2|Cobll1|ENSMUSG00000034903.19|Cobl-like 1
mm39_v1_chr5_+_105667254_105667291	1.09924	Twist1	ENSMUST00000067924.13|Lrrc8c|ENSMUSG00000054720.13|leucine rich repeat containing 8 family, member C	ENSMUST00000150981.2|Lrrc8c|ENSMUSG00000054720.13|leucine rich repeat containing 8 family, member C
mm39_v1_chr2_+_139520098_139520098	1.08501	Twist1	ENSMUST00000184404.8|Ism1|ENSMUSG00000074766.11|isthmin 1, angiogenesis inhibitor	ENSMUST00000099307.4|Ism1|ENSMUSG00000074766.11|isthmin 1, angiogenesis inhibitor
mm39_v1_chr13_+_55612050_55612132	1.07939	Twist1	ENSMUST00000046533.9|Prr7|ENSMUSG00000034686.9|proline rich 7 (synaptic)
mm39_v1_chr7_+_30121776_30121870	1.07799	Twist1	ENSMUST00000108175.8|Nfkbid|ENSMUSG00000036931.16|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
mm39_v1_chr11_+_53410552_53410627	1.05563	Twist1	ENSMUST00000108987.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000121334.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000117061.8|Septin8|ENSMUSG00000018398.19|septin 8
mm39_v1_chr5_-_23881353_23881489	1.04047	Twist1	ENSMUST00000198661.5|Srpk2|ENSMUSG00000062604.12|serine/arginine-rich protein specific kinase 2
mm39_v1_chr4_-_129452180_129452191	1.03342	Twist1	ENSMUST00000067240.11|Lck|ENSMUSG00000000409.15|lymphocyte protein tyrosine kinase
mm39_v1_chr4_-_129452148_129452171	1.02991	Twist1	ENSMUST00000167288.8|Lck|ENSMUSG00000000409.15|lymphocyte protein tyrosine kinase	ENSMUST00000134336.3|Lck|ENSMUSG00000000409.15|lymphocyte protein tyrosine kinase
mm39_v1_chr5_+_149335214_149335277	1.01962	Twist1	ENSMUST00000093110.12|Medag|ENSMUSG00000029659.17|mesenteric estrogen dependent adipogenesis
mm39_v1_chr8_+_72889073_72889108	1.01842	Twist1	ENSMUST00000003575.11|Tpm4|ENSMUSG00000031799.11|tropomyosin 4
mm39_v1_chr11_-_94440025_94440025	1.01375	Twist1	ENSMUST00000040487.4|Rsad1|ENSMUSG00000039096.11|radical S-adenosyl methionine domain containing 1
mm39_v1_chr9_-_108444561_108444656	1.00322	Twist1	ENSMUST00000074208.6|Ndufaf3|ENSMUSG00000070283.5|NADH:ubiquinone oxidoreductase complex assembly factor 3
mm39_v1_chr17_+_34258411_34258455	0.971094	Twist1	ENSMUST00000087497.11|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000131134.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000235819.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114255.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114252.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000237989.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2
mm39_v1_chr2_+_163867370_163867370	0.96134	Twist1	ENSMUST00000067715.5|Pabpc1l|ENSMUSG00000054582.5|poly(A) binding protein, cytoplasmic 1-like
mm39_v1_chr6_-_83808717_83808732	0.91232	Twist1	ENSMUST00000058383.9|Paip2b|ENSMUSG00000045896.15|poly(A) binding protein interacting protein 2B
mm39_v1_chr8_+_122996308_122996308	0.908703	Twist1	ENSMUST00000055537.3|Zfp469|ENSMUSG00000043903.5|zinc finger protein 469
mm39_v1_chr11_+_109541747_109541829	0.905593	Twist1	ENSMUST00000049527.7|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chr7_-_139616538_139616590	0.905417	Twist1	ENSMUST00000211638.2|Tubgcp2|ENSMUSG00000025474.10|tubulin, gamma complex associated protein 2
mm39_v1_chr7_+_82516491_82516604	0.901263	Twist1	ENSMUST00000082237.7|Mex3b|ENSMUSG00000057706.8|mex3 RNA binding family member B
mm39_v1_chr7_+_130179063_130179214	0.89244	Twist1	ENSMUST00000207918.2|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000215492.2|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000084513.12|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2	ENSMUST00000059145.14|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2
mm39_v1_chrX_-_18327610_18327642	0.879923	Twist1	ENSMUST00000044188.5|Dipk2b|ENSMUSG00000037358.7|divergent protein kinase domain 2B
mm39_v1_chr7_-_140596811_140596828	0.878911	Twist1	ENSMUST00000081924.5|Ifitm6|ENSMUSG00000059108.5|interferon induced transmembrane protein 6
mm39_v1_chr14_-_70414236_70414279	0.873922	Twist1	ENSMUST00000153735.8|Pdlim2|ENSMUSG00000022090.11|PDZ and LIM domain 2
mm39_v1_chr4_+_155875629_155875629	0.868467	Twist1	ENSMUST00000105593.2|Ankrd65|ENSMUSG00000078487.9|ankyrin repeat domain 65
mm39_v1_chr13_+_97208069_97208151	0.846144	Twist1	ENSMUST00000042517.8|Fam169a|ENSMUSG00000041817.15|family with sequence similarity 169, member A
mm39_v1_chr8_+_53964721_53964777	0.823713	Twist1	ENSMUST00000211424.2|Aga|ENSMUSG00000031521.6|aspartylglucosaminidase	ENSMUST00000033920.6|Aga|ENSMUSG00000031521.6|aspartylglucosaminidase
mm39_v1_chr7_+_139616298_139616441	0.813366	Twist1	ENSMUST00000168194.3|Zfp511|ENSMUSG00000025470.12|zinc finger protein 511	ENSMUST00000210882.2|Zfp511|ENSMUSG00000025470.12|zinc finger protein 511
mm39_v1_chr9_-_14815163_14815180	0.770057	Twist1	ENSMUST00000069408.10|Izumo1r|ENSMUSG00000031933.18|IZUMO1 receptor, JUNO
mm39_v1_chr2_+_155593030_155593043	0.726499	Twist1	ENSMUST00000029140.12|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial	ENSMUST00000132608.2|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial
mm39_v1_chrX_+_56098908_56098975	0.673559	Twist1	ENSMUST00000114751.9|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1	ENSMUST00000088652.6|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1
mm39_v1_chr2_+_127183838_127183838	0.65582	Twist1	ENSMUST00000156747.2|Astl|ENSMUSG00000050468.13|astacin-like metalloendopeptidase (M12 family)
mm39_v1_chr7_-_84339156_84339172	0.651295	Twist1	ENSMUST00000209117.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000207975.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr7_-_84339045_84339109	0.6435	Twist1	ENSMUST00000209165.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr17_-_35978438_35978490	0.63538	Twist1	ENSMUST00000043674.15|Vars2|ENSMUSG00000038838.16|valyl-tRNA synthetase 2, mitochondrial
mm39_v1_chr5_+_31454939_31454961	0.603473	Twist1	ENSMUST00000201675.3|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein
mm39_v1_chrX_+_85235370_85235388	0.602572	Twist1	ENSMUST00000026036.5|Nr0b1|ENSMUSG00000025056.5|nuclear receptor subfamily 0, group B, member 1
mm39_v1_chr16_+_18245134_18245158	0.60195	Twist1	ENSMUST00000205679.3|Txnrd2|ENSMUSG00000075704.18|thioredoxin reductase 2
mm39_v1_chr16_+_31482745_31482857	0.573864	Twist1	ENSMUST00000100001.10|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1	ENSMUST00000064477.14|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1
mm39_v1_chr14_+_101891416_101891484	0.569992	Twist1	ENSMUST00000002289.8|Uchl3|ENSMUSG00000022111.10|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
mm39_v1_chr3_+_107008343_107008462	0.536639	Twist1	ENSMUST00000197470.5|Kcna2|ENSMUSG00000040724.6|potassium voltage-gated channel, shaker-related subfamily, member 2
mm39_v1_chr2_-_142743438_142743530	0.53307	Twist1	ENSMUST00000230763.2|Kif16b|ENSMUSG00000038844.11|kinesin family member 16B	ENSMUST00000043589.8|Kif16b|ENSMUSG00000038844.11|kinesin family member 16B
mm39_v1_chr15_+_100202642_100202728	0.523691	Twist1	ENSMUST00000067752.5|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1	ENSMUST00000229588.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr4_-_126362372_126362446	0.50503	Twist1	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr2_-_180562718_180562757	0.467929	Twist1	ENSMUST00000037299.15|Ythdf1|ENSMUSG00000038848.15|YTH N6-methyladenosine RNA binding protein 1	ENSMUST00000108876.9|Ythdf1|ENSMUSG00000038848.15|YTH N6-methyladenosine RNA binding protein 1
mm39_v1_chr2_+_173952123_173952191	0.394141	Twist1	ENSMUST00000044415.16|Npepl1|ENSMUSG00000039263.17|aminopeptidase-like 1
mm39_v1_chr2_+_130116357_130116412	0.38304	Twist1	ENSMUST00000136621.9|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein	ENSMUST00000141872.2|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein
mm39_v1_chr3_+_89958940_89958944	0.365022	Twist1	ENSMUST00000159064.8|4933434E20Rik|ENSMUSG00000027942.18|RIKEN cDNA 4933434E20 gene
mm39_v1_chr2_-_32674435_32674459	0.357504	Twist1	ENSMUST00000102813.2|Cfap157|ENSMUSG00000038987.9|cilia and flagella associated protein 157
mm39_v1_chr11_-_109188947_109188968	0.351504	Twist1	ENSMUST00000020920.10|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chr14_-_70855980_70856014	0.34483	Twist1	ENSMUST00000228001.2|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr10_-_23226034_23226149	0.34458	Twist1	ENSMUST00000219315.2|Eya4|ENSMUSG00000010461.17|EYA transcriptional coactivator and phosphatase 4
mm39_v1_chr7_+_24310171_24310201	0.338416	Twist1	ENSMUST00000206422.2|Phldb3|ENSMUSG00000074277.5|pleckstrin homology like domain, family B, member 3
mm39_v1_chr16_+_31482658_31482731	0.319571	Twist1	ENSMUST00000115201.8|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1
mm39_v1_chr17_+_8559539_8559579	0.318587	Twist1	ENSMUST00000163887.2|Prr18|ENSMUSG00000055945.9|proline rich 18
mm39_v1_chr3_+_65435825_65435876	0.297522	Twist1	ENSMUST00000047906.10|Tiparp|ENSMUSG00000034640.10|TCDD-inducible poly(ADP-ribose) polymerase
mm39_v1_chr9_-_44920899_44920943	0.295758	Twist1	ENSMUST00000102832.3|Cd3e|ENSMUSG00000032093.8|CD3 antigen, epsilon polypeptide
mm39_v1_chr7_-_80051455_80051502	0.293906	Twist1	ENSMUST00000120753.3|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr2_-_172782089_172782141	0.2915	Twist1	ENSMUST00000009143.8|Bmp7|ENSMUSG00000008999.8|bone morphogenetic protein 7
mm39_v1_chr1_+_90926443_90926518	0.281302	Twist1	ENSMUST00000189505.7|Lrrfip1|ENSMUSG00000026305.16|leucine rich repeat (in FLII) interacting protein 1	ENSMUST00000185531.7|Lrrfip1|ENSMUSG00000026305.16|leucine rich repeat (in FLII) interacting protein 1	ENSMUST00000068116.13|Lrrfip1|ENSMUSG00000026305.16|leucine rich repeat (in FLII) interacting protein 1
mm39_v1_chr1_+_174329361_174329410	0.265048	Twist1	ENSMUST00000030039.13|Fmn2|ENSMUSG00000028354.14|formin 2
mm39_v1_chr4_+_132495636_132495701	0.25727	Twist1	ENSMUST00000102561.11|Rpa2|ENSMUSG00000028884.15|replication protein A2
mm39_v1_chr14_+_53061814_53061814	0.255612	Twist1	ENSMUST00000103648.4|Trav11d|ENSMUSG00000095088.4|T cell receptor alpha variable 11D
mm39_v1_chr8_-_117809188_117809188	0.242622	Twist1	ENSMUST00000109093.9|Pkd1l2|ENSMUSG00000034416.19|polycystic kidney disease 1 like 2	ENSMUST00000098375.6|Pkd1l2|ENSMUSG00000034416.19|polycystic kidney disease 1 like 2
mm39_v1_chr19_-_24257904_24257980	0.241437	Twist1	ENSMUST00000081333.11|Fxn|ENSMUSG00000059363.11|frataxin
mm39_v1_chr7_-_142233270_142233463	0.240633	Twist1	ENSMUST00000162317.2|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000125933.2|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000105931.8|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000105930.8|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000105933.8|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000105932.2|Ins2|ENSMUSG00000000215.12|insulin II	ENSMUST00000000220.3|Ins2|ENSMUSG00000000215.12|insulin II
mm39_v1_chr11_-_109188917_109188944	0.23504	Twist1	ENSMUST00000106704.3|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chr7_+_127400016_127400113	0.217926	Twist1	ENSMUST00000106271.2|Hsd3b7|ENSMUSG00000042289.12|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	ENSMUST00000138432.2|Hsd3b7|ENSMUSG00000042289.12|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm39_v1_chr3_-_104869237_104869237	0.158862	Twist1	ENSMUST00000029429.6|Wnt2b|ENSMUSG00000027840.6|wingless-type MMTV integration site family, member 2B
mm39_v1_chr14_+_58313964_58313964	0.14876	Twist1	ENSMUST00000166770.2|Fgf9|ENSMUSG00000021974.16|fibroblast growth factor 9
mm39_v1_chr2_-_168607166_168607181	0.12759	Twist1	ENSMUST00000137536.2|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr6_-_119940694_119940797	0.126316	Twist1	ENSMUST00000161512.3|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr17_+_74645936_74646032	0.120482	Twist1	ENSMUST00000224711.2|Spast|ENSMUSG00000024068.9|spastin	ENSMUST00000024869.8|Spast|ENSMUSG00000024068.9|spastin	ENSMUST00000233611.2|Spast|ENSMUSG00000024068.9|spastin
mm39_v1_chr8_-_32499513_32499547	0.107325	Twist1	ENSMUST00000208205.3|Nrg1|ENSMUSG00000062991.10|neuregulin 1
mm39_v1_chr11_-_82761954_82762036	0.0898715	Twist1	ENSMUST00000108173.10|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000071152.14|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr11_-_109188892_109188906	0.0853742	Twist1	ENSMUST00000106706.8|Rgs9|ENSMUSG00000020599.14|regulator of G-protein signaling 9
mm39_v1_chr2_+_29855572_29855700	0.0806303	Twist1	ENSMUST00000113719.9|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000113717.8|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000113741.8|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000100225.9|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000095083.11|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000046257.14|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1
mm39_v1_chr11_+_69826603_69826643	0.0736495	Twist1	ENSMUST00000018698.12|Ybx2|ENSMUSG00000018554.14|Y box protein 2
mm39_v1_chr9_+_118307918_118307934	0.0723795	Twist1	ENSMUST00000150633.2|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr10_+_69369854_69369901	0.0596041	Twist1	ENSMUST00000182557.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr15_-_57755753_57755879	0.0471241	Twist1	ENSMUST00000022993.7|Derl1|ENSMUSG00000022365.7|Der1-like domain family, member 1
mm39_v1_chr11_+_69826719_69826756	0.0385249	Twist1	ENSMUST00000149194.8|Ybx2|ENSMUSG00000018554.14|Y box protein 2
mm39_v1_chr13_+_104246259_104246337	0.0272416	Twist1	ENSMUST00000160322.8|Sgtb|ENSMUSG00000042743.14|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	ENSMUST00000159574.2|Sgtb|ENSMUSG00000042743.14|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm39_v1_chr18_+_40390013_40390076	0.0169898	Twist1	ENSMUST00000096572.2|Kctd16|ENSMUSG00000051401.8|potassium channel tetramerisation domain containing 16	ENSMUST00000236889.2|Kctd16|ENSMUSG00000051401.8|potassium channel tetramerisation domain containing 16
mm39_v1_chr3_-_141874955_141875023	0.00211872	Twist1	ENSMUST00000098568.8|Bmpr1b|ENSMUSG00000052430.16|bone morphogenetic protein receptor, type 1B
