mm39_v1_chr19_+_28812474_28812541	6.00389	UACAGUA	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr16_-_10131804_10131832	5.06526	UACAGUA	ENSMUST00000078357.5|Emp2|ENSMUSG00000022505.10|epithelial membrane protein 2
mm39_v1_chr8_+_96429665_96429698	4.47591	UACAGUA	ENSMUST00000073139.14|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000080666.8|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000212160.2|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4
mm39_v1_chr3_-_132655954_132656052	4.29109	UACAGUA	ENSMUST00000042744.16|Npnt|ENSMUSG00000040998.19|nephronectin	ENSMUST00000117811.8|Npnt|ENSMUSG00000040998.19|nephronectin
mm39_v1_chr6_+_135339929_135339959	4.26583	UACAGUA	ENSMUST00000032330.16|Emp1|ENSMUSG00000030208.16|epithelial membrane protein 1
mm39_v1_chr12_+_85520652_85520672	4.20433	UACAGUA	ENSMUST00000021674.7|Fos|ENSMUSG00000021250.14|FBJ osteosarcoma oncogene
mm39_v1_chr15_-_83609127_83609245	4.19192	UACAGUA	ENSMUST00000171496.9|Scube1|ENSMUSG00000016763.16|signal peptide, CUB domain, EGF-like 1	ENSMUST00000043634.12|Scube1|ENSMUSG00000016763.16|signal peptide, CUB domain, EGF-like 1	ENSMUST00000076060.12|Scube1|ENSMUSG00000016763.16|signal peptide, CUB domain, EGF-like 1	ENSMUST00000016907.8|Scube1|ENSMUSG00000016763.16|signal peptide, CUB domain, EGF-like 1
mm39_v1_chr1_+_149975782_149975857	4.09487	UACAGUA	ENSMUST00000035065.9|Ptgs2|ENSMUSG00000032487.9|prostaglandin-endoperoxide synthase 2
mm39_v1_chr7_-_111379170_111379200	3.97596	UACAGUA	ENSMUST00000049430.15|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18	ENSMUST00000106663.2|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18
mm39_v1_chr11_+_102495189_102495262	3.7855	UACAGUA	ENSMUST00000057893.7|Fzd2|ENSMUSG00000050288.7|frizzled class receptor 2
mm39_v1_chr10_+_56253418_56253434	3.57326	UACAGUA	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr9_-_56068282_56068360	3.52285	UACAGUA	ENSMUST00000034876.10|Tspan3|ENSMUSG00000032324.12|tetraspanin 3
mm39_v1_chr16_-_74208180_74208314	3.46662	UACAGUA	ENSMUST00000117200.8|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr2_+_76236870_76236936	3.42354	UACAGUA	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr2_+_138098454_138098499	3.41785	UACAGUA	ENSMUST00000091556.12|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr9_-_27066685_27066723	3.37722	UACAGUA	ENSMUST00000034472.16|Jam3|ENSMUSG00000031990.16|junction adhesion molecule 3
mm39_v1_chr11_-_28534260_28534325	3.36494	UACAGUA	ENSMUST00000093253.10|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000109502.9|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000042534.15|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A
mm39_v1_chr9_+_72832904_72832955	3.32774	UACAGUA	ENSMUST00000038489.6|Pygo1|ENSMUSG00000034910.6|pygopus 1
mm39_v1_chr12_+_95658987_95659011	3.2705	UACAGUA	ENSMUST00000057324.4|Flrt2|ENSMUSG00000047414.7|fibronectin leucine rich transmembrane protein 2
mm39_v1_chr2_-_140513382_140513399	3.16375	UACAGUA	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chr2_-_115896279_115896334	3.13555	UACAGUA	ENSMUST00000110907.8|Meis2|ENSMUSG00000027210.21|Meis homeobox 2	ENSMUST00000110908.9|Meis2|ENSMUSG00000027210.21|Meis homeobox 2
mm39_v1_chr2_-_131987008_131987037	2.99631	UACAGUA	ENSMUST00000028815.15|Slc23a2|ENSMUSG00000027340.16|solute carrier family 23 (nucleobase transporters), member 2
mm39_v1_chr15_-_83989801_83989955	2.99014	UACAGUA	ENSMUST00000229826.2|Sult4a1|ENSMUSG00000018865.10|sulfotransferase family 4A, member 1	ENSMUST00000082365.6|Sult4a1|ENSMUSG00000018865.10|sulfotransferase family 4A, member 1
mm39_v1_chr14_+_76192449_76192456	2.97646	UACAGUA	ENSMUST00000050120.4|Kctd4|ENSMUSG00000046523.6|potassium channel tetramerisation domain containing 4
mm39_v1_chr8_+_111448092_111448118	2.97085	UACAGUA	ENSMUST00000052457.15|Mtss2|ENSMUSG00000033763.15|MTSS I-BAR domain containing 2
mm39_v1_chr5_+_74355940_74355955	2.80373	UACAGUA	ENSMUST00000051937.9|Rasl11b|ENSMUSG00000049907.9|RAS-like, family 11, member B
mm39_v1_chr5_+_53966956_53967025	2.76666	UACAGUA	ENSMUST00000037337.10|Tbc1d19|ENSMUSG00000039178.10|TBC1 domain family, member 19
mm39_v1_chrX_-_74621828_74621854	2.76297	UACAGUA	ENSMUST00000033545.6|Rab39b|ENSMUSG00000031202.6|RAB39B, member RAS oncogene family
mm39_v1_chr2_-_125348305_125348328	2.7422	UACAGUA	ENSMUST00000028633.13|Fbn1|ENSMUSG00000027204.14|fibrillin 1
mm39_v1_chr12_+_117480099_117480148	2.69878	UACAGUA	ENSMUST00000109691.4|Rapgef5|ENSMUSG00000041992.10|Rap guanine nucleotide exchange factor (GEF) 5
mm39_v1_chr16_-_84970617_84970654	2.69009	UACAGUA	ENSMUST00000226232.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227021.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000005406.12|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein	ENSMUST00000227723.2|App|ENSMUSG00000022892.12|amyloid beta (A4) precursor protein
mm39_v1_chr5_-_37981919_37981933	2.68491	UACAGUA	ENSMUST00000063116.10|Msx1|ENSMUSG00000048450.11|msh homeobox 1
mm39_v1_chr15_-_93493758_93493795	2.67702	UACAGUA	ENSMUST00000048982.11|Prickle1|ENSMUSG00000036158.13|prickle planar cell polarity protein 1
mm39_v1_chr1_-_46893206_46893240	2.67566	UACAGUA	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr11_+_42310557_42310612	2.64417	UACAGUA	ENSMUST00000007797.10|Gabrb2|ENSMUSG00000007653.13|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm39_v1_chr19_+_27194757_27194825	2.56011	UACAGUA	ENSMUST00000047645.13|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor	ENSMUST00000167487.8|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor
mm39_v1_chr13_+_45660905_45660994	2.5142	UACAGUA	ENSMUST00000000260.13|Gmpr|ENSMUSG00000000253.14|guanosine monophosphate reductase
mm39_v1_chr8_+_75940572_75940572	2.51206	UACAGUA	ENSMUST00000139848.8|Rasd2|ENSMUSG00000034472.14|RASD family, member 2
mm39_v1_chr16_-_23709564_23709708	2.49402	UACAGUA	ENSMUST00000004480.5|Sst|ENSMUSG00000004366.5|somatostatin
mm39_v1_chr1_-_72914036_72914050	2.46535	UACAGUA	ENSMUST00000027377.9|Igfbp5|ENSMUSG00000026185.9|insulin-like growth factor binding protein 5
mm39_v1_chr1_-_184731672_184731767	2.46389	UACAGUA	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr8_-_8711211_8711250	2.44663	UACAGUA	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr5_+_57876401_57876457	2.40931	UACAGUA	ENSMUST00000094783.7|Pcdh7|ENSMUSG00000029108.15|protocadherin 7
mm39_v1_chr5_+_103573367_103573367	2.39782	UACAGUA	ENSMUST00000048957.11|Ptpn13|ENSMUSG00000034573.15|protein tyrosine phosphatase, non-receptor type 13
mm39_v1_chr11_-_69496655_69496797	2.35215	UACAGUA	ENSMUST00000047889.13|Atp1b2|ENSMUSG00000041329.14|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm39_v1_chr6_+_107506678_107506741	2.27729	UACAGUA	ENSMUST00000049285.10|Lrrn1|ENSMUSG00000034648.10|leucine rich repeat protein 1, neuronal
mm39_v1_chr11_-_61470462_61470533	2.21783	UACAGUA	ENSMUST00000147501.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000146455.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108711.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108712.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000001063.15|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108713.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000179936.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000178202.8|Epn2|ENSMUSG00000001036.18|epsin 2
mm39_v1_chr14_-_24295988_24295988	2.20883	UACAGUA	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr16_-_20245138_20245149	2.20687	UACAGUA	ENSMUST00000079158.13|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr16_+_10884156_10884247	2.20523	UACAGUA	ENSMUST00000089011.6|Snn|ENSMUSG00000037972.8|stannin
mm39_v1_chr8_+_104828253_104828342	2.18892	UACAGUA	ENSMUST00000034339.10|Cdh5|ENSMUSG00000031871.10|cadherin 5
mm39_v1_chrX_-_104973003_104973014	2.16497	UACAGUA	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr15_+_38869415_38869443	2.15356	UACAGUA	ENSMUST00000179165.9|Fzd6|ENSMUSG00000022297.16|frizzled class receptor 6
mm39_v1_chr2_+_116951855_116951880	2.10654	UACAGUA	ENSMUST00000028829.13|Spred1|ENSMUSG00000027351.15|sprouty protein with EVH-1 domain 1, related sequence
mm39_v1_chr7_+_73025243_73025299	2.09917	UACAGUA	ENSMUST00000119206.3|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A	ENSMUST00000094312.12|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A
mm39_v1_chr5_+_36050663_36050817	2.06965	UACAGUA	ENSMUST00000064571.11|Afap1|ENSMUSG00000029094.13|actin filament associated protein 1
mm39_v1_chr1_+_17797257_17797312	2.05711	UACAGUA	ENSMUST00000159958.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000160305.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000095075.5|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1
mm39_v1_chr11_-_6425877_6425917	2.03977	UACAGUA	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr8_+_117983803_117983846	2.02137	UACAGUA	ENSMUST00000166750.9|Cmip|ENSMUSG00000034390.17|c-Maf inducing protein
mm39_v1_chr5_-_128510108_128510159	2.01383	UACAGUA	ENSMUST00000044441.8|Tmem132d|ENSMUSG00000034310.9|transmembrane protein 132D
mm39_v1_chr15_-_43034205_43034227	1.97651	UACAGUA	ENSMUST00000063492.8|Rspo2|ENSMUSG00000051920.8|R-spondin 2	ENSMUST00000226810.2|Rspo2|ENSMUSG00000051920.8|R-spondin 2
mm39_v1_chr13_+_46571910_46571986	1.94894	UACAGUA	ENSMUST00000037923.5|Rbm24|ENSMUSG00000038132.7|RNA binding motif protein 24
mm39_v1_chr11_-_119438569_119438585	1.88722	UACAGUA	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chrX_+_98086187_98086220	1.87397	UACAGUA	ENSMUST00000036606.14|Stard8|ENSMUSG00000031216.14|START domain containing 8
mm39_v1_chr7_+_130467486_130467542	1.8711	UACAGUA	ENSMUST00000120441.8|Plekha1|ENSMUSG00000040268.18|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm39_v1_chr3_+_38941089_38941089	1.87088	UACAGUA	ENSMUST00000061260.8|Fat4|ENSMUSG00000046743.7|FAT atypical cadherin 4
mm39_v1_chr7_+_16609227_16609319	1.86047	UACAGUA	ENSMUST00000108493.3|Dact3|ENSMUSG00000078794.5|dishevelled-binding antagonist of beta-catenin 3
mm39_v1_chr12_+_38830081_38830116	1.85634	UACAGUA	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr4_+_94627513_94627537	1.84554	UACAGUA	ENSMUST00000073939.13|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase	ENSMUST00000102798.8|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase
mm39_v1_chr11_-_30218167_30218196	1.83542	UACAGUA	ENSMUST00000006629.14|Sptbn1|ENSMUSG00000020315.19|spectrin beta, non-erythrocytic 1
mm39_v1_chr13_+_49697919_49698009	1.81248	UACAGUA	ENSMUST00000177948.2|Aspn|ENSMUSG00000021388.15|asporin	ENSMUST00000021820.14|Aspn|ENSMUSG00000021388.15|asporin
mm39_v1_chr14_+_120513076_120513094	1.79456	UACAGUA	ENSMUST00000088419.13|Mbnl2|ENSMUSG00000022139.18|muscleblind like splicing factor 2
mm39_v1_chr5_+_134128543_134128635	1.78951	UACAGUA	ENSMUST00000016088.9|Castor2|ENSMUSG00000015944.10|cytosolic arginine sensor for mTORC1 subunit 2
mm39_v1_chr11_+_93886906_93886929	1.78919	UACAGUA	ENSMUST00000041956.14|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr6_-_18514801_18514859	1.76015	UACAGUA	ENSMUST00000090601.12|Cttnbp2|ENSMUSG00000000416.17|cortactin binding protein 2
mm39_v1_chr6_-_83133379_83133396	1.73105	UACAGUA	ENSMUST00000153148.8|Wdr54|ENSMUSG00000030032.15|WD repeat domain 54	ENSMUST00000125894.9|Wdr54|ENSMUSG00000030032.15|WD repeat domain 54
mm39_v1_chr10_-_30718760_30718797	1.72914	UACAGUA	ENSMUST00000019924.9|Hey2|ENSMUSG00000019789.10|hairy/enhancer-of-split related with YRPW motif 2
mm39_v1_chr10_-_71121083_71121094	1.67728	UACAGUA	ENSMUST00000020085.7|Ube2d1|ENSMUSG00000019927.7|ubiquitin-conjugating enzyme E2D 1
mm39_v1_chr12_-_81827893_81827949	1.66903	UACAGUA	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr1_-_143652711_143652806	1.66902	UACAGUA	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chr15_-_58078274_58078328	1.66501	UACAGUA	ENSMUST00000022986.8|Fbxo32|ENSMUSG00000022358.8|F-box protein 32
mm39_v1_chrX_-_156381652_156381711	1.66326	UACAGUA	ENSMUST00000149249.2|Mbtps2|ENSMUSG00000046873.19|membrane-bound transcription factor peptidase, site 2	ENSMUST00000058098.15|Mbtps2|ENSMUSG00000046873.19|membrane-bound transcription factor peptidase, site 2
mm39_v1_chr19_+_56536685_56536716	1.64737	UACAGUA	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr2_-_84255602_84255755	1.6425	UACAGUA	ENSMUST00000074262.9|Calcrl|ENSMUSG00000059588.14|calcitonin receptor-like
mm39_v1_chr17_+_55752485_55752551	1.63815	UACAGUA	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr3_-_80710097_80710147	1.6369	UACAGUA	ENSMUST00000075316.10|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)	ENSMUST00000107745.8|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm39_v1_chr16_+_13176238_13176334	1.63101	UACAGUA	ENSMUST00000149359.2|Mrtfb|ENSMUSG00000009569.15|myocardin related transcription factor B
mm39_v1_chr7_+_64151435_64151454	1.62564	UACAGUA	ENSMUST00000032732.15|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr18_+_34354031_34354073	1.62418	UACAGUA	ENSMUST00000115781.10|Apc|ENSMUSG00000005871.16|APC, WNT signaling pathway regulator	ENSMUST00000079362.13|Apc|ENSMUSG00000005871.16|APC, WNT signaling pathway regulator
mm39_v1_chr9_+_118335294_118335357	1.61154	UACAGUA	ENSMUST00000084820.6|Golga4|ENSMUSG00000038708.11|golgi autoantigen, golgin subfamily a, 4
mm39_v1_chr16_+_57173456_57173480	1.58263	UACAGUA	ENSMUST00000159816.8|Filip1l|ENSMUSG00000043336.15|filamin A interacting protein 1-like
mm39_v1_chr3_-_9675130_9675146	1.56911	UACAGUA	ENSMUST00000041124.13|Zfp704|ENSMUSG00000040209.13|zinc finger protein 704
mm39_v1_chr10_+_98750978_98751034	1.54293	UACAGUA	ENSMUST00000020107.8|Atp2b1|ENSMUSG00000019943.11|ATPase, Ca++ transporting, plasma membrane 1
mm39_v1_chr8_-_37081091_37081102	1.53923	UACAGUA	ENSMUST00000033923.14|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chrX_+_81992467_81992521	1.53782	UACAGUA	ENSMUST00000114000.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr3_-_153430741_153430816	1.51414	UACAGUA	ENSMUST00000064460.7|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	ENSMUST00000200397.5|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm39_v1_chr16_+_58228806_58228886	1.51262	UACAGUA	ENSMUST00000046663.8|Dcbld2|ENSMUSG00000035107.14|discoidin, CUB and LCCL domain containing 2
mm39_v1_chr1_+_17672117_17672137	1.50875	UACAGUA	ENSMUST00000088476.4|Pi15|ENSMUSG00000067780.4|peptidase inhibitor 15
mm39_v1_chr3_-_141687987_141688025	1.50351	UACAGUA	ENSMUST00000029948.15|Bmpr1b|ENSMUSG00000052430.16|bone morphogenetic protein receptor, type 1B
mm39_v1_chr18_+_69478790_69478882	1.49899	UACAGUA	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr3_+_138447956_138448094	1.47492	UACAGUA	ENSMUST00000029800.9|Tspan5|ENSMUSG00000028152.11|tetraspanin 5
mm39_v1_chr5_+_89034666_89034684	1.44689	UACAGUA	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr18_+_68066328_68066378	1.43604	UACAGUA	ENSMUST00000063775.5|Ldlrad4|ENSMUSG00000024544.10|low density lipoprotein receptor class A domain containing 4
mm39_v1_chr2_+_121697398_121697478	1.40345	UACAGUA	ENSMUST00000110586.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2	ENSMUST00000078752.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2
mm39_v1_chr19_-_42074777_42074813	1.40215	UACAGUA	ENSMUST00000051772.10|Morn4|ENSMUSG00000049670.10|MORN repeat containing 4
mm39_v1_chr3_-_59251573_59251677	1.38662	UACAGUA	ENSMUST00000193455.6|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10	ENSMUST00000039419.12|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10	ENSMUST00000195983.2|Igsf10|ENSMUSG00000036334.13|immunoglobulin superfamily, member 10
mm39_v1_chr15_+_101071948_101072029	1.38165	UACAGUA	ENSMUST00000000544.12|Acvr1b|ENSMUSG00000000532.12|activin A receptor, type 1B
mm39_v1_chrX_-_146337046_146337082	1.37556	UACAGUA	ENSMUST00000112819.9|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2	ENSMUST00000136789.8|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2
mm39_v1_chr1_+_127132712_127132788	1.36148	UACAGUA	ENSMUST00000038361.11|Mgat5|ENSMUSG00000036155.14|mannoside acetylglucosaminyltransferase 5
mm39_v1_chr17_-_66384017_66384086	1.35999	UACAGUA	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr15_-_58695379_58695430	1.34913	UACAGUA	ENSMUST00000072113.6|Tmem65|ENSMUSG00000062373.9|transmembrane protein 65
mm39_v1_chr15_-_13173736_13173791	1.34278	UACAGUA	ENSMUST00000036439.6|Cdh6|ENSMUSG00000039385.6|cadherin 6
mm39_v1_chr1_+_174329361_174329410	1.33668	UACAGUA	ENSMUST00000030039.13|Fmn2|ENSMUSG00000028354.14|formin 2
mm39_v1_chr3_+_28835425_28835493	1.31781	UACAGUA	ENSMUST00000060500.9|Eif5a2|ENSMUSG00000050192.9|eukaryotic translation initiation factor 5A2
mm39_v1_chr18_-_35348049_35348092	1.31661	UACAGUA	ENSMUST00000091636.5|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2	ENSMUST00000236680.2|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2
mm39_v1_chr3_+_61269059_61269059	1.30724	UACAGUA	ENSMUST00000049064.4|Rap2b|ENSMUSG00000036894.4|RAP2B, member of RAS oncogene family
mm39_v1_chr3_-_49711765_49711772	1.30231	UACAGUA	ENSMUST00000035931.13|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr8_-_123278054_123278071	1.30172	UACAGUA	ENSMUST00000156333.9|Piezo1|ENSMUSG00000014444.18|piezo-type mechanosensitive ion channel component 1	ENSMUST00000067252.14|Piezo1|ENSMUSG00000014444.18|piezo-type mechanosensitive ion channel component 1
mm39_v1_chr4_+_19605451_19605451	1.29853	UACAGUA	ENSMUST00000108250.3|Gm12353|ENSMUSG00000078772.3|predicted gene 12353
mm39_v1_chr19_+_56710570_56710631	1.2918	UACAGUA	ENSMUST00000038949.6|Adrb1|ENSMUSG00000035283.6|adrenergic receptor, beta 1
mm39_v1_chr5_-_151113619_151113734	1.28702	UACAGUA	ENSMUST00000062015.15|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13	ENSMUST00000110483.9|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13
mm39_v1_chr7_-_46782448_46782465	1.28131	UACAGUA	ENSMUST00000033142.13|Ptpn5|ENSMUSG00000030854.18|protein tyrosine phosphatase, non-receptor type 5
mm39_v1_chr8_-_123768759_123768834	1.27138	UACAGUA	ENSMUST00000098334.13|Ankrd11|ENSMUSG00000035569.18|ankyrin repeat domain 11
mm39_v1_chr6_-_72416531_72416548	1.261	UACAGUA	ENSMUST00000205335.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000206692.2|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha	ENSMUST00000059472.10|Mat2a|ENSMUSG00000053907.11|methionine adenosyltransferase II, alpha
mm39_v1_chr14_+_64181115_64181136	1.25923	UACAGUA	ENSMUST00000079652.7|Sox7|ENSMUSG00000063060.7|SRY (sex determining region Y)-box 7
mm39_v1_chr19_+_47003111_47003137	1.2307	UACAGUA	ENSMUST00000037636.4|Ina|ENSMUSG00000034336.4|internexin neuronal intermediate filament protein, alpha
mm39_v1_chr18_+_58011691_58011750	1.2253	UACAGUA	ENSMUST00000115366.3|Slc12a2|ENSMUSG00000024597.12|solute carrier family 12, member 2
mm39_v1_chr19_+_29229147_29229256	1.2204	UACAGUA	ENSMUST00000025705.7|Jak2|ENSMUSG00000024789.14|Janus kinase 2	ENSMUST00000065796.10|Jak2|ENSMUSG00000024789.14|Janus kinase 2	ENSMUST00000236990.2|Jak2|ENSMUSG00000024789.14|Janus kinase 2
mm39_v1_chr2_-_24365576_24365592	1.21572	UACAGUA	ENSMUST00000153601.8|Pax8|ENSMUSG00000026976.16|paired box 8	ENSMUST00000136228.10|Pax8|ENSMUSG00000026976.16|paired box 8
mm39_v1_chr19_+_48194464_48194601	1.21456	UACAGUA	ENSMUST00000078880.6|Sorcs3|ENSMUSG00000063434.7|sortilin-related VPS10 domain containing receptor 3
mm39_v1_chr18_+_5591864_5591902	1.21412	UACAGUA	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr9_-_42035560_42035631	1.20556	UACAGUA	ENSMUST00000060989.9|Sorl1|ENSMUSG00000049313.9|sortilin-related receptor, LDLR class A repeats-containing
mm39_v1_chr19_+_23118545_23118627	1.20363	UACAGUA	ENSMUST00000036884.3|Klf9|ENSMUSG00000033863.3|Kruppel-like factor 9
mm39_v1_chr11_+_17109263_17109404	1.19911	UACAGUA	ENSMUST00000102880.5|Ppp3r1|ENSMUSG00000033953.11|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm39_v1_chr2_+_59442378_59442453	1.19776	UACAGUA	ENSMUST00000112568.8|Tanc1|ENSMUSG00000035168.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	ENSMUST00000037526.11|Tanc1|ENSMUSG00000035168.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm39_v1_chr16_-_45664664_45664744	1.1949	UACAGUA	ENSMUST00000036355.13|Phldb2|ENSMUSG00000033149.18|pleckstrin homology like domain, family B, member 2
mm39_v1_chr2_+_14609063_14609117	1.19355	UACAGUA	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr16_+_33504829_33504842	1.18983	UACAGUA	ENSMUST00000152782.8|Heg1|ENSMUSG00000075254.13|heart development protein with EGF-like domains 1
mm39_v1_chr13_+_93444514_93444542	1.18183	UACAGUA	ENSMUST00000079086.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr11_-_89193158_89193158	1.18052	UACAGUA	ENSMUST00000061728.5|Nog|ENSMUSG00000048616.5|noggin
mm39_v1_chr14_+_69266566_69266687	1.17991	UACAGUA	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr2_-_102231208_102231314	1.17905	UACAGUA	ENSMUST00000102573.8|Trim44|ENSMUSG00000027189.17|tripartite motif-containing 44
mm39_v1_chr14_-_4198510_4198572	1.17078	UACAGUA	ENSMUST00000133460.2|Nkiras1|ENSMUSG00000021772.16|NFKB inhibitor interacting Ras-like protein 1	ENSMUST00000132374.9|Nkiras1|ENSMUSG00000021772.16|NFKB inhibitor interacting Ras-like protein 1
mm39_v1_chr5_-_68004743_68004781	1.16966	UACAGUA	ENSMUST00000072971.13|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113652.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113651.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000037380.15|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm39_v1_chr2_-_45003270_45003296	1.16944	UACAGUA	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr13_-_63713549_63713549	1.16843	UACAGUA	ENSMUST00000021921.11|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr13_+_9326513_9326657	1.16503	UACAGUA	ENSMUST00000174552.8|Dip2c|ENSMUSG00000048264.17|disco interacting protein 2 homolog C
mm39_v1_chr5_-_69749617_69749683	1.16051	UACAGUA	ENSMUST00000173927.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000120789.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000031117.13|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr8_+_129085719_129085787	1.14523	UACAGUA	ENSMUST00000026917.10|Nrp1|ENSMUSG00000025810.10|neuropilin 1
mm39_v1_chr5_+_67125759_67125790	1.13891	UACAGUA	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr1_+_60448703_60448811	1.13751	UACAGUA	ENSMUST00000052332.15|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr7_-_132616977_132617058	1.1254	UACAGUA	ENSMUST00000169570.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr17_+_13980764_13980936	1.12341	UACAGUA	ENSMUST00000139347.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000156591.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000170827.9|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000139666.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000137708.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000137784.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000150848.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor
mm39_v1_chr13_-_94422337_94422409	1.10562	UACAGUA	ENSMUST00000022197.15|Scamp1|ENSMUSG00000021687.15|secretory carrier membrane protein 1	ENSMUST00000152555.8|Scamp1|ENSMUSG00000021687.15|secretory carrier membrane protein 1
mm39_v1_chr2_+_61876806_61876850	1.1047	UACAGUA	ENSMUST00000102735.10|Slc4a10|ENSMUSG00000026904.18|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm39_v1_chr14_+_33645539_33645560	1.09353	UACAGUA	ENSMUST00000168727.3|Gdf10|ENSMUSG00000021943.8|growth differentiation factor 10
mm39_v1_chr4_+_119671688_119671723	1.08212	UACAGUA	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr7_-_81584081_81584221	1.07206	UACAGUA	ENSMUST00000026094.6|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3	ENSMUST00000107305.8|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3
mm39_v1_chr13_-_89890609_89890634	1.06795	UACAGUA	ENSMUST00000109546.9|Vcan|ENSMUSG00000021614.17|versican
mm39_v1_chr7_+_112278520_112278532	1.06436	UACAGUA	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr18_+_23548455_23548511	1.04452	UACAGUA	ENSMUST00000115832.4|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr3_+_136375839_136375948	1.04246	UACAGUA	ENSMUST00000070198.14|Ppp3ca|ENSMUSG00000028161.18|protein phosphatase 3, catalytic subunit, alpha isoform
mm39_v1_chr10_+_81128795_81128839	1.01709	UACAGUA	ENSMUST00000163075.8|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000105327.10|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000045469.15|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm39_v1_chr14_+_4230569_4230642	1.01243	UACAGUA	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr11_+_105480796_105480857	1.0032	UACAGUA	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr11_-_79145489_79145506	1.00241	UACAGUA	ENSMUST00000017821.12|Wsb1|ENSMUSG00000017677.12|WD repeat and SOCS box-containing 1
mm39_v1_chr1_-_164285914_164285932	1.00122	UACAGUA	ENSMUST00000027863.13|Atp1b1|ENSMUSG00000026576.13|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm39_v1_chr11_-_69304501_69304501	0.984404	UACAGUA	ENSMUST00000094077.5|Kdm6b|ENSMUSG00000018476.8|KDM1 lysine (K)-specific demethylase 6B
mm39_v1_chr17_+_87415049_87415129	0.983536	UACAGUA	ENSMUST00000041369.8|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5	ENSMUST00000234803.2|Socs5|ENSMUSG00000037104.10|suppressor of cytokine signaling 5
mm39_v1_chr14_+_26959975_26960003	0.979211	UACAGUA	ENSMUST00000049206.6|Arhgef3|ENSMUSG00000021895.11|Rho guanine nucleotide exchange factor (GEF) 3
mm39_v1_chr1_-_134883645_134883693	0.972577	UACAGUA	ENSMUST00000045665.13|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000086444.6|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000112163.2|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B
mm39_v1_chr10_+_21870565_21870591	0.960464	UACAGUA	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr16_+_18066730_18066784	0.959017	UACAGUA	ENSMUST00000115640.8|Trmt2a|ENSMUSG00000022721.20|TRM2 tRNA methyltransferase 2A	ENSMUST00000140206.8|Trmt2a|ENSMUSG00000022721.20|TRM2 tRNA methyltransferase 2A
mm39_v1_chr15_-_36794741_36794791	0.957569	UACAGUA	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr3_+_133942244_133942261	0.956719	UACAGUA	ENSMUST00000181904.3|Cxxc4|ENSMUSG00000044365.16|CXXC finger 4
mm39_v1_chr12_+_85645801_85645905	0.941853	UACAGUA	ENSMUST00000177587.9|Jdp2|ENSMUSG00000034271.17|Jun dimerization protein 2
mm39_v1_chr12_-_46865709_46865720	0.925291	UACAGUA	ENSMUST00000021438.8|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr1_+_132345293_132345348	0.923884	UACAGUA	ENSMUST00000045110.14|Dstyk|ENSMUSG00000042046.16|dual serine/threonine and tyrosine protein kinase	ENSMUST00000188389.2|Dstyk|ENSMUSG00000042046.16|dual serine/threonine and tyrosine protein kinase
mm39_v1_chr19_-_47452840_47452894	0.909669	UACAGUA	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr6_+_140568366_140568389	0.90247	UACAGUA	ENSMUST00000032359.15|Aebp2|ENSMUSG00000030232.19|AE binding protein 2
mm39_v1_chr9_-_4796217_4796267	0.892701	UACAGUA	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr6_+_83891336_83891393	0.890596	UACAGUA	ENSMUST00000204751.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000204202.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000203455.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113836.6|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113835.10|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000032088.14|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638
mm39_v1_chr17_-_66756710_66756753	0.883772	UACAGUA	ENSMUST00000086693.12|Mtcl1|ENSMUSG00000052105.18|microtubule crosslinking factor 1	ENSMUST00000097291.10|Mtcl1|ENSMUSG00000052105.18|microtubule crosslinking factor 1
mm39_v1_chr12_+_119909692_119909868	0.870827	UACAGUA	ENSMUST00000058644.15|Tmem196|ENSMUSG00000048004.16|transmembrane protein 196
mm39_v1_chr12_+_24881582_24881657	0.869406	UACAGUA	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr6_-_37276885_37276919	0.866644	UACAGUA	ENSMUST00000101532.10|Dgki|ENSMUSG00000038665.16|diacylglycerol kinase, iota
mm39_v1_chr13_+_92981257_92981298	0.844895	UACAGUA	ENSMUST00000076169.4|Mtx3|ENSMUSG00000021704.9|metaxin 3
mm39_v1_chr18_-_25886750_25886807	0.836449	UACAGUA	ENSMUST00000224553.2|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4	ENSMUST00000025117.14|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4
mm39_v1_chr4_-_153567221_153567268	0.835911	UACAGUA	ENSMUST00000105646.3|Ajap1|ENSMUSG00000039546.10|adherens junction associated protein 1
mm39_v1_chr3_-_84212069_84212116	0.83244	UACAGUA	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr1_+_179373935_179373970	0.828765	UACAGUA	ENSMUST00000040706.9|Cnst|ENSMUSG00000038949.9|consortin, connexin sorting protein
mm39_v1_chr6_-_56774622_56774741	0.820975	UACAGUA	ENSMUST00000114323.8|Kbtbd2|ENSMUSG00000059486.12|kelch repeat and BTB (POZ) domain containing 2
mm39_v1_chr18_-_33596792_33596853	0.819882	UACAGUA	ENSMUST00000051087.16|Nrep|ENSMUSG00000042834.16|neuronal regeneration related protein
mm39_v1_chr2_+_69727563_69727591	0.812688	UACAGUA	ENSMUST00000055758.16|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3	ENSMUST00000112251.9|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3
mm39_v1_chr1_-_17168063_17168113	0.804377	UACAGUA	ENSMUST00000038382.5|Jph1|ENSMUSG00000042686.6|junctophilin 1
mm39_v1_chr16_+_37909363_37909426	0.800778	UACAGUA	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr16_+_80997580_80997629	0.796989	UACAGUA	ENSMUST00000037785.14|Ncam2|ENSMUSG00000022762.19|neural cell adhesion molecule 2	ENSMUST00000067602.5|Ncam2|ENSMUSG00000022762.19|neural cell adhesion molecule 2
mm39_v1_chr11_+_52122836_52122873	0.792807	UACAGUA	ENSMUST00000037324.12|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1	ENSMUST00000166537.8|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1
mm39_v1_chr6_-_29179583_29179583	0.792437	UACAGUA	ENSMUST00000159200.2|Prrt4|ENSMUSG00000079654.4|proline-rich transmembrane protein 4
mm39_v1_chr6_-_126621751_126621768	0.772458	UACAGUA	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr4_-_126150066_126150163	0.761977	UACAGUA	ENSMUST00000122129.8|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000061143.15|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000106132.3|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1
mm39_v1_chr2_-_136229849_136229905	0.761186	UACAGUA	ENSMUST00000035264.9|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5	ENSMUST00000077200.4|Pak5|ENSMUSG00000039913.13|p21 (RAC1) activated kinase 5
mm39_v1_chr5_-_86320599_86320662	0.760194	UACAGUA	ENSMUST00000039373.14|Uba6|ENSMUSG00000035898.14|ubiquitin-like modifier activating enzyme 6
mm39_v1_chr2_+_173918715_173918859	0.74574	UACAGUA	ENSMUST00000087908.10|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000044638.13|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000156054.2|Stx16|ENSMUSG00000027522.16|syntaxin 16
mm39_v1_chr1_-_96799832_96799905	0.739859	UACAGUA	ENSMUST00000071985.6|Slco4c1|ENSMUSG00000040693.8|solute carrier organic anion transporter family, member 4C1
mm39_v1_chr11_+_60066681_60066713	0.739006	UACAGUA	ENSMUST00000102688.2|Rai1|ENSMUSG00000062115.16|retinoic acid induced 1
mm39_v1_chr3_+_126157333_126157333	0.738627	UACAGUA	ENSMUST00000093976.4|Arsj|ENSMUSG00000046561.10|arylsulfatase J
mm39_v1_chr16_+_4704103_4704133	0.7376	UACAGUA	ENSMUST00000023159.10|Mgrn1|ENSMUSG00000022517.18|mahogunin, ring finger 1	ENSMUST00000070658.16|Mgrn1|ENSMUSG00000022517.18|mahogunin, ring finger 1	ENSMUST00000229038.2|Mgrn1|ENSMUSG00000022517.18|mahogunin, ring finger 1
mm39_v1_chr19_-_60215097_60215138	0.735914	UACAGUA	ENSMUST00000238054.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A	ENSMUST00000065286.2|Fam204a|ENSMUSG00000057858.9|family with sequence similarity 204, member A
mm39_v1_chr15_-_28025920_28025970	0.731003	UACAGUA	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr13_+_110039620_110039645	0.724381	UACAGUA	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr3_+_88049633_88049790	0.724274	UACAGUA	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr18_-_72484126_72484140	0.724233	UACAGUA	ENSMUST00000114943.11|Dcc|ENSMUSG00000060534.17|deleted in colorectal carcinoma
mm39_v1_chr7_-_81104423_81104512	0.724144	UACAGUA	ENSMUST00000178892.3|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1	ENSMUST00000098331.10|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1
mm39_v1_chr12_-_14202041_14202070	0.722856	UACAGUA	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr4_+_28813125_28813139	0.72057	UACAGUA	ENSMUST00000080934.11|Epha7|ENSMUSG00000028289.13|Eph receptor A7	ENSMUST00000029964.12|Epha7|ENSMUSG00000028289.13|Eph receptor A7
mm39_v1_chr1_+_55170390_55170409	0.719699	UACAGUA	ENSMUST00000159311.8|Mob4|ENSMUSG00000025979.14|MOB family member 4, phocein	ENSMUST00000162364.8|Mob4|ENSMUSG00000025979.14|MOB family member 4, phocein
mm39_v1_chr1_-_170042947_170042989	0.718152	UACAGUA	ENSMUST00000027979.14|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1	ENSMUST00000123399.2|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1
mm39_v1_chr3_+_138231935_138231940	0.716552	UACAGUA	ENSMUST00000029803.12|Eif4e|ENSMUSG00000028156.13|eukaryotic translation initiation factor 4E
mm39_v1_chrX_-_73129195_73129296	0.715916	UACAGUA	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr13_+_55357585_55357602	0.71494	UACAGUA	ENSMUST00000224973.2|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1	ENSMUST00000099490.3|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1
mm39_v1_chr8_-_89770790_89770823	0.71322	UACAGUA	ENSMUST00000034090.8|Sall1|ENSMUSG00000031665.8|spalt like transcription factor 1
mm39_v1_chr2_-_58247764_58247907	0.711748	UACAGUA	ENSMUST00000112608.9|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC	ENSMUST00000112607.3|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC	ENSMUST00000028178.14|Acvr1c|ENSMUSG00000026834.14|activin A receptor, type IC
mm39_v1_chrX_+_36137948_36137999	0.709477	UACAGUA	ENSMUST00000016452.11|Ube2a|ENSMUSG00000016308.13|ubiquitin-conjugating enzyme E2A	ENSMUST00000202991.4|Ube2a|ENSMUSG00000016308.13|ubiquitin-conjugating enzyme E2A	ENSMUST00000201068.4|Ube2a|ENSMUSG00000016308.13|ubiquitin-conjugating enzyme E2A	ENSMUST00000200835.4|Ube2a|ENSMUSG00000016308.13|ubiquitin-conjugating enzyme E2A
mm39_v1_chr9_+_78020554_78020659	0.703696	UACAGUA	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr9_-_114762986_114763067	0.694216	UACAGUA	ENSMUST00000146623.8|Gpd1l|ENSMUSG00000050627.14|glycerol-3-phosphate dehydrogenase 1-like
mm39_v1_chr17_+_53786240_53786332	0.68832	UACAGUA	ENSMUST00000017975.7|Rab5a|ENSMUSG00000017831.9|RAB5A, member RAS oncogene family
mm39_v1_chr13_+_48414582_48414704	0.685095	UACAGUA	ENSMUST00000021810.3|Id4|ENSMUSG00000021379.3|inhibitor of DNA binding 4
mm39_v1_chr10_+_92996686_92996756	0.67683	UACAGUA	ENSMUST00000069965.9|Cdk17|ENSMUSG00000020015.11|cyclin-dependent kinase 17
mm39_v1_chr7_+_36397426_36397543	0.673125	UACAGUA	ENSMUST00000021641.8|Tshz3|ENSMUSG00000021217.8|teashirt zinc finger family member 3
mm39_v1_chr2_-_6889783_6889807	0.672342	UACAGUA	ENSMUST00000170438.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114924.10|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114934.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr16_-_15964634_15964715	0.660104	UACAGUA	ENSMUST00000040248.9|Spidr|ENSMUSG00000041974.11|scaffolding protein involved in DNA repair
mm39_v1_chr5_+_71857261_71857292	0.660006	UACAGUA	ENSMUST00000031122.9|Gabrb1|ENSMUSG00000029212.12|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm39_v1_chr8_+_45388466_45388484	0.647045	UACAGUA	ENSMUST00000191428.7|Fat1|ENSMUSG00000070047.15|FAT atypical cadherin 1
mm39_v1_chr9_+_104446682_104446825	0.640823	UACAGUA	ENSMUST00000057742.15|Cpne4|ENSMUSG00000032564.17|copine IV
mm39_v1_chr1_+_15382676_15382676	0.639849	UACAGUA	ENSMUST00000170146.3|Kcnb2|ENSMUSG00000092083.5|potassium voltage gated channel, Shab-related subfamily, member 2
mm39_v1_chr15_+_88943916_88943987	0.639153	UACAGUA	ENSMUST00000161372.2|Panx2|ENSMUSG00000058441.8|pannexin 2	ENSMUST00000162424.2|Panx2|ENSMUSG00000058441.8|pannexin 2
mm39_v1_chr9_-_31123083_31123120	0.637383	UACAGUA	ENSMUST00000217641.2|Aplp2|ENSMUSG00000031996.18|amyloid beta (A4) precursor-like protein 2	ENSMUST00000072634.15|Aplp2|ENSMUSG00000031996.18|amyloid beta (A4) precursor-like protein 2	ENSMUST00000079758.9|Aplp2|ENSMUSG00000031996.18|amyloid beta (A4) precursor-like protein 2	ENSMUST00000213254.2|Aplp2|ENSMUSG00000031996.18|amyloid beta (A4) precursor-like protein 2
mm39_v1_chr6_-_147165623_147165681	0.631041	UACAGUA	ENSMUST00000052296.9|Pthlh|ENSMUSG00000048776.9|parathyroid hormone-like peptide	ENSMUST00000204197.2|Pthlh|ENSMUSG00000048776.9|parathyroid hormone-like peptide
mm39_v1_chr8_+_79755194_79755242	0.615341	UACAGUA	ENSMUST00000119254.8|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827	ENSMUST00000238669.2|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827
mm39_v1_chr13_+_5911481_5911521	0.611863	UACAGUA	ENSMUST00000000080.8|Klf6|ENSMUSG00000000078.8|Kruppel-like factor 6
mm39_v1_chrX_+_133305291_133305377	0.608038	UACAGUA	ENSMUST00000113228.8|Drp2|ENSMUSG00000000223.14|dystrophin related protein 2	ENSMUST00000153424.8|Drp2|ENSMUSG00000000223.14|dystrophin related protein 2
mm39_v1_chrX_+_158315666_158315751	0.60701	UACAGUA	ENSMUST00000057180.13|Bclaf3|ENSMUSG00000044150.13|Bclaf1 and Thrap3 family member 3
mm39_v1_chr9_-_96634874_96634924	0.60007	UACAGUA	ENSMUST00000152594.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr19_-_24533183_24533253	0.588523	UACAGUA	ENSMUST00000112673.9|Pip5k1b|ENSMUSG00000024867.15|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	ENSMUST00000025800.15|Pip5k1b|ENSMUSG00000024867.15|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
mm39_v1_chr11_+_32592707_32592875	0.579479	UACAGUA	ENSMUST00000109366.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000093205.13|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000076383.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11
mm39_v1_chr2_+_134627987_134628090	0.575258	UACAGUA	ENSMUST00000131552.5|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1	ENSMUST00000110116.8|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1
mm39_v1_chr19_-_17814984_17815006	0.573707	UACAGUA	ENSMUST00000025618.16|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5	ENSMUST00000050715.10|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5
mm39_v1_chr17_+_86475205_86475223	0.560404	UACAGUA	ENSMUST00000097275.9|Prkce|ENSMUSG00000045038.15|protein kinase C, epsilon
mm39_v1_chr10_+_111342147_111342278	0.555847	UACAGUA	ENSMUST00000164773.2|Phlda1|ENSMUSG00000020205.9|pleckstrin homology like domain, family A, member 1
mm39_v1_chr3_-_133250129_133250174	0.555338	UACAGUA	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr9_+_13739003_13739075	0.55036	UACAGUA	ENSMUST00000059579.12|Fam76b|ENSMUSG00000037808.14|family with sequence similarity 76, member B
mm39_v1_chr18_+_58969739_58969824	0.549557	UACAGUA	ENSMUST00000052907.7|Adamts19|ENSMUSG00000053441.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
mm39_v1_chr17_-_26727437_26727493	0.546479	UACAGUA	ENSMUST00000236661.2|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1	ENSMUST00000025025.7|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1
mm39_v1_chr12_+_49429574_49429666	0.54459	UACAGUA	ENSMUST00000179669.3|Foxg1|ENSMUSG00000020950.11|forkhead box G1
mm39_v1_chrX_-_46981379_46981429	0.530183	UACAGUA	ENSMUST00000077569.11|Smarca1|ENSMUSG00000031099.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	ENSMUST00000101616.9|Smarca1|ENSMUSG00000031099.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	ENSMUST00000088973.11|Smarca1|ENSMUSG00000031099.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
mm39_v1_chr5_+_32616187_32616312	0.525485	UACAGUA	ENSMUST00000015100.15|Ppp1cb|ENSMUSG00000014956.16|protein phosphatase 1 catalytic subunit beta
mm39_v1_chr16_-_92622972_92623037	0.523749	UACAGUA	ENSMUST00000023673.14|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr5_+_23639432_23639478	0.520406	UACAGUA	ENSMUST00000094962.9|Kmt2e|ENSMUSG00000029004.16|lysine (K)-specific methyltransferase 2E	ENSMUST00000115128.8|Kmt2e|ENSMUSG00000029004.16|lysine (K)-specific methyltransferase 2E
mm39_v1_chrX_-_149879501_149879539	0.519822	UACAGUA	ENSMUST00000112683.9|Tsr2|ENSMUSG00000025264.13|TSR2 20S rRNA accumulation	ENSMUST00000026295.10|Tsr2|ENSMUSG00000025264.13|TSR2 20S rRNA accumulation
mm39_v1_chr3_+_53371086_53371102	0.501253	UACAGUA	ENSMUST00000058577.5|Proser1|ENSMUSG00000049504.13|proline and serine rich 1
mm39_v1_chr12_-_69403892_69403956	0.499561	UACAGUA	ENSMUST00000222065.2|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor	ENSMUST00000021368.10|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor
mm39_v1_chr3_-_144275897_144275989	0.49885	UACAGUA	ENSMUST00000043325.9|Hs2st1|ENSMUSG00000040151.10|heparan sulfate 2-O-sulfotransferase 1
mm39_v1_chr11_-_78588194_78588205	0.498583	UACAGUA	ENSMUST00000142739.8|Nlk|ENSMUSG00000017376.16|nemo like kinase
mm39_v1_chr6_+_113054314_113054343	0.491989	UACAGUA	ENSMUST00000042889.12|Setd5|ENSMUSG00000034269.13|SET domain containing 5
mm39_v1_chr8_+_96078886_96078957	0.48955	UACAGUA	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr6_-_90787100_90787142	0.489066	UACAGUA	ENSMUST00000101151.10|Iqsec1|ENSMUSG00000034312.16|IQ motif and Sec7 domain 1
mm39_v1_chr19_+_60744385_60744432	0.488917	UACAGUA	ENSMUST00000088237.6|Nanos1|ENSMUSG00000072437.5|nanos C2HC-type zinc finger 1
mm39_v1_chr12_+_16944896_16944904	0.485351	UACAGUA	ENSMUST00000020904.8|Rock2|ENSMUSG00000020580.11|Rho-associated coiled-coil containing protein kinase 2
mm39_v1_chr9_+_123358810_123358824	0.472676	UACAGUA	ENSMUST00000026270.9|Sacm1l|ENSMUSG00000025240.11|SAC1 suppressor of actin mutations 1-like (yeast)	ENSMUST00000239083.2|Sacm1l|ENSMUSG00000025240.11|SAC1 suppressor of actin mutations 1-like (yeast)
mm39_v1_chr16_-_43959559_43959668	0.470928	UACAGUA	ENSMUST00000063661.13|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A	ENSMUST00000114666.9|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A
mm39_v1_chr7_+_100355798_100355909	0.470612	UACAGUA	ENSMUST00000107042.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000207564.2|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000049053.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A
mm39_v1_chr10_+_89580849_89580884	0.469008	UACAGUA	ENSMUST00000020112.7|Uhrf1bp1l|ENSMUSG00000019951.11|UHRF1 (ICBP90) binding protein 1-like
mm39_v1_chr7_-_121306476_121306685	0.467238	UACAGUA	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr11_+_108811168_108811184	0.460939	UACAGUA	ENSMUST00000052915.14|Axin2|ENSMUSG00000000142.16|axin 2
mm39_v1_chr10_+_3690348_3690432	0.458606	UACAGUA	ENSMUST00000120274.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr10_+_107998219_107998269	0.455463	UACAGUA	ENSMUST00000070663.6|Ppp1r12a|ENSMUSG00000019907.11|protein phosphatase 1, regulatory subunit 12A
mm39_v1_chr5_-_23821523_23821596	0.454345	UACAGUA	ENSMUST00000088392.9|Srpk2|ENSMUSG00000062604.12|serine/arginine-rich protein specific kinase 2
mm39_v1_chr4_+_54947976_54948054	0.454209	UACAGUA	ENSMUST00000098070.10|Zfp462|ENSMUSG00000060206.12|zinc finger protein 462
mm39_v1_chr1_-_138547403_138547497	0.451257	UACAGUA	ENSMUST00000027642.5|Nek7|ENSMUSG00000026393.11|NIMA (never in mitosis gene a)-related expressed kinase 7	ENSMUST00000186017.7|Nek7|ENSMUSG00000026393.11|NIMA (never in mitosis gene a)-related expressed kinase 7
mm39_v1_chr12_-_27392356_27392573	0.442974	UACAGUA	ENSMUST00000079063.7|Sox11|ENSMUSG00000063632.7|SRY (sex determining region Y)-box 11
mm39_v1_chrX_-_12628309_12628318	0.440367	UACAGUA	ENSMUST00000096495.11|Med14|ENSMUSG00000064127.14|mediator complex subunit 14	ENSMUST00000076016.6|Med14|ENSMUSG00000064127.14|mediator complex subunit 14
mm39_v1_chr7_-_130964469_130964488	0.432097	UACAGUA	ENSMUST00000059438.11|2310057M21Rik|ENSMUSG00000040177.11|RIKEN cDNA 2310057M21 gene
mm39_v1_chr18_+_39126178_39126240	0.429194	UACAGUA	ENSMUST00000097593.9|Arhgap26|ENSMUSG00000036452.19|Rho GTPase activating protein 26
mm39_v1_chr13_-_93636224_93636333	0.426758	UACAGUA	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr14_-_67309866_67309925	0.421497	UACAGUA	ENSMUST00000225380.2|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha	ENSMUST00000089230.7|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha
mm39_v1_chr18_+_38552011_38552040	0.416227	UACAGUA	ENSMUST00000025293.5|Ndfip1|ENSMUSG00000024425.5|Nedd4 family interacting protein 1
mm39_v1_chrX_+_18028814_18028897	0.408383	UACAGUA	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr13_+_49495025_49495099	0.405306	UACAGUA	ENSMUST00000048544.14|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110084.4|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110085.11|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2
mm39_v1_chr12_-_111874489_111874559	0.402025	UACAGUA	ENSMUST00000054815.15|Ppp1r13b|ENSMUSG00000021285.16|protein phosphatase 1, regulatory subunit 13B
mm39_v1_chr18_+_10325148_10325222	0.40143	UACAGUA	ENSMUST00000048977.16|Greb1l|ENSMUSG00000042942.19|growth regulation by estrogen in breast cancer-like
mm39_v1_chr9_-_86762467_86762520	0.398421	UACAGUA	ENSMUST00000074501.12|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000239074.2|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000098495.10|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000036347.13|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91	ENSMUST00000074468.13|Snap91|ENSMUSG00000033419.17|synaptosomal-associated protein 91
mm39_v1_chr6_+_86381201_86381222	0.396025	UACAGUA	ENSMUST00000095754.10|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000095753.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr6_-_13839914_13839941	0.395576	UACAGUA	ENSMUST00000060442.14|Gpr85|ENSMUSG00000048216.14|G protein-coupled receptor 85
mm39_v1_chr9_-_96993169_96993214	0.394802	UACAGUA	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr9_+_21077010_21077058	0.393094	UACAGUA	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr1_+_6557455_6557563	0.391738	UACAGUA	ENSMUST00000140079.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131494.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chrX_-_56438380_56438400	0.372764	UACAGUA	ENSMUST00000143310.2|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000098470.9|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000114726.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr6_+_112436466_112436565	0.363697	UACAGUA	ENSMUST00000075477.8|Cav3|ENSMUSG00000062694.8|caveolin 3
mm39_v1_chr6_+_97783975_97784028	0.363499	UACAGUA	ENSMUST00000203884.3|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000043637.14|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr12_-_12991828_12991915	0.362221	UACAGUA	ENSMUST00000043396.15|Mycn|ENSMUSG00000037169.16|v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
mm39_v1_chr17_+_6157154_6157182	0.361279	UACAGUA	ENSMUST00000149756.8|Tulp4|ENSMUSG00000034377.11|tubby like protein 4
mm39_v1_chr2_+_112285342_112285408	0.35784	UACAGUA	ENSMUST00000069747.6|Emc7|ENSMUSG00000055943.6|ER membrane protein complex subunit 7
mm39_v1_chr9_+_47441471_47441671	0.356066	UACAGUA	ENSMUST00000114548.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000152459.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000143026.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000085909.9|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000114547.8|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000239368.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000214542.2|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1	ENSMUST00000034581.4|Cadm1|ENSMUSG00000032076.21|cell adhesion molecule 1
mm39_v1_chr5_+_122347792_122347906	0.354366	UACAGUA	ENSMUST00000072602.14|Hvcn1|ENSMUSG00000064267.14|hydrogen voltage-gated channel 1
mm39_v1_chr2_-_69416365_69416409	0.343125	UACAGUA	ENSMUST00000100051.9|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000092551.5|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000080953.12|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2
mm39_v1_chr12_-_91815855_91815931	0.335787	UACAGUA	ENSMUST00000167466.2|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000021347.12|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000178462.8|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)
mm39_v1_chr4_+_14864076_14864147	0.330183	UACAGUA	ENSMUST00000029875.4|Pip4p2|ENSMUSG00000028221.4|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
mm39_v1_chr1_+_32211792_32211968	0.326617	UACAGUA	ENSMUST00000027226.12|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000189878.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000188257.7|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000185666.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2
mm39_v1_chr12_+_8724129_8724150	0.325221	UACAGUA	ENSMUST00000111123.9|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000178015.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000020915.10|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr2_-_112311114_112311114	0.325109	UACAGUA	ENSMUST00000099589.4|Chrm5|ENSMUSG00000074939.4|cholinergic receptor, muscarinic 5
mm39_v1_chr6_+_18170686_18170756	0.321602	UACAGUA	ENSMUST00000045706.12|Cftr|ENSMUSG00000041301.16|cystic fibrosis transmembrane conductance regulator
mm39_v1_chr5_-_74229021_74229099	0.320426	UACAGUA	ENSMUST00000119154.8|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46	ENSMUST00000068058.14|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46
mm39_v1_chr1_-_162567919_162568103	0.314783	UACAGUA	ENSMUST00000182331.2|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000183011.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182593.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182149.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C
mm39_v1_chr3_+_146110387_146110487	0.311435	UACAGUA	ENSMUST00000106151.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106153.9|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000039021.11|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000106149.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein	ENSMUST00000149262.8|Ssx2ip|ENSMUSG00000036825.13|synovial sarcoma, X 2 interacting protein
mm39_v1_chr11_-_59118988_59119096	0.307365	UACAGUA	ENSMUST00000163300.8|Arf1|ENSMUSG00000048076.15|ADP-ribosylation factor 1	ENSMUST00000061242.8|Arf1|ENSMUSG00000048076.15|ADP-ribosylation factor 1
mm39_v1_chr1_-_136273811_136273884	0.305753	UACAGUA	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr4_-_134431534_134431605	0.300713	UACAGUA	ENSMUST00000054096.13|Man1c1|ENSMUSG00000037306.14|mannosidase, alpha, class 1C, member 1	ENSMUST00000038628.4|Man1c1|ENSMUSG00000037306.14|mannosidase, alpha, class 1C, member 1
mm39_v1_chr4_-_44167509_44167609	0.297407	UACAGUA	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr15_+_58287305_58287361	0.29395	UACAGUA	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr2_+_154278357_154278455	0.29344	UACAGUA	ENSMUST00000109725.8|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000099178.10|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000045270.15|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000109724.2|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2
mm39_v1_chr9_-_54408780_54408928	0.292434	UACAGUA	ENSMUST00000118600.8|Dmxl2|ENSMUSG00000041268.18|Dmx-like 2	ENSMUST00000118163.8|Dmxl2|ENSMUSG00000041268.18|Dmx-like 2
mm39_v1_chr17_-_46867083_46867114	0.290256	UACAGUA	ENSMUST00000015749.7|Srf|ENSMUSG00000015605.7|serum response factor
mm39_v1_chr11_-_23845207_23845280	0.278306	UACAGUA	ENSMUST00000102863.3|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma	ENSMUST00000020513.10|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma
mm39_v1_chr2_+_177760768_177760955	0.276637	UACAGUA	ENSMUST00000108917.8|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
mm39_v1_chr10_-_14420725_14420780	0.276606	UACAGUA	ENSMUST00000041168.6|Adgrg6|ENSMUSG00000039116.8|adhesion G protein-coupled receptor G6	ENSMUST00000238680.2|Adgrg6|ENSMUSG00000039116.8|adhesion G protein-coupled receptor G6
mm39_v1_chr8_+_91796680_91796751	0.27469	UACAGUA	ENSMUST00000034091.8|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2	ENSMUST00000211136.2|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2
mm39_v1_chr4_-_81360993_81361073	0.272765	UACAGUA	ENSMUST00000107262.8|Mpdz|ENSMUSG00000028402.19|multiple PDZ domain crumbs cell polarity complex component	ENSMUST00000102830.10|Mpdz|ENSMUSG00000028402.19|multiple PDZ domain crumbs cell polarity complex component
mm39_v1_chr6_-_48063464_48063591	0.270137	UACAGUA	ENSMUST00000073124.9|Zfp746|ENSMUSG00000057691.9|zinc finger protein 746	ENSMUST00000203609.3|Zfp746|ENSMUSG00000057691.9|zinc finger protein 746
mm39_v1_chr6_+_21215472_21215502	0.270054	UACAGUA	ENSMUST00000081542.6|Kcnd2|ENSMUSG00000060882.6|potassium voltage-gated channel, Shal-related family, member 2
mm39_v1_chr1_-_58625431_58625482	0.264285	UACAGUA	ENSMUST00000161000.2|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B	ENSMUST00000161600.8|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B
mm39_v1_chr13_+_89687915_89687915	0.260481	UACAGUA	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr3_-_19365431_19365486	0.259931	UACAGUA	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr6_+_38528269_38528428	0.252093	UACAGUA	ENSMUST00000163047.8|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)	ENSMUST00000161538.8|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)	ENSMUST00000057692.11|Luc7l2|ENSMUSG00000029823.17|LUC7-like 2 (S. cerevisiae)
mm39_v1_chr12_-_86931529_86931580	0.243275	UACAGUA	ENSMUST00000038422.8|Irf2bpl|ENSMUSG00000034168.8|interferon regulatory factor 2 binding protein-like
mm39_v1_chr16_-_13485986_13486045	0.239222	UACAGUA	ENSMUST00000058884.10|Parn|ENSMUSG00000022685.10|poly(A)-specific ribonuclease (deadenylation nuclease)
mm39_v1_chrX_+_52001108_52001238	0.235808	UACAGUA	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr4_+_134195631_134195720	0.234944	UACAGUA	ENSMUST00000030636.11|Stmn1|ENSMUSG00000028832.12|stathmin 1	ENSMUST00000127279.8|Stmn1|ENSMUSG00000028832.12|stathmin 1	ENSMUST00000105867.8|Stmn1|ENSMUSG00000028832.12|stathmin 1
mm39_v1_chr2_+_31462780_31462841	0.233277	UACAGUA	ENSMUST00000137889.7|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000194386.6|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000055244.13|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3
mm39_v1_chr14_-_79628106_79628218	0.233262	UACAGUA	ENSMUST00000022597.15|Naa16|ENSMUSG00000022020.16|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm39_v1_chr9_+_59658156_59658205	0.232813	UACAGUA	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr5_+_111565129_111565308	0.227972	UACAGUA	ENSMUST00000094463.5|Mn1|ENSMUSG00000070576.5|meningioma 1
mm39_v1_chr11_-_31320065_31320081	0.223947	UACAGUA	ENSMUST00000020546.3|Stc2|ENSMUSG00000020303.3|stanniocalcin 2
mm39_v1_chr1_-_106687457_106687478	0.222153	UACAGUA	ENSMUST00000010049.6|Kdsr|ENSMUSG00000009905.6|3-ketodihydrosphingosine reductase
mm39_v1_chr12_+_32428691_32428709	0.217813	UACAGUA	ENSMUST00000172332.4|Ccdc71l|ENSMUSG00000090946.4|coiled-coil domain containing 71 like
mm39_v1_chr5_-_143513732_143513791	0.217399	UACAGUA	ENSMUST00000100489.4|Rac1|ENSMUSG00000001847.15|Rac family small GTPase 1	ENSMUST00000080537.14|Rac1|ENSMUSG00000001847.15|Rac family small GTPase 1
mm39_v1_chr1_+_91422353_91422423	0.212626	UACAGUA	ENSMUST00000189341.7|Traf3ip1|ENSMUSG00000034292.14|TRAF3 interacting protein 1	ENSMUST00000047242.9|Traf3ip1|ENSMUSG00000034292.14|TRAF3 interacting protein 1
mm39_v1_chr5_-_107437427_107437514	0.208435	UACAGUA	ENSMUST00000031224.15|Tgfbr3|ENSMUSG00000029287.15|transforming growth factor, beta receptor III
mm39_v1_chr4_+_148533062_148533094	0.206228	UACAGUA	ENSMUST00000103221.10|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase	ENSMUST00000057580.8|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase
mm39_v1_chr3_+_157239988_157240048	0.205813	UACAGUA	ENSMUST00000029831.16|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2	ENSMUST00000106057.8|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2
mm39_v1_chr17_-_12537635_12537690	0.205232	UACAGUA	ENSMUST00000233755.2|Map3k4|ENSMUSG00000014426.10|mitogen-activated protein kinase kinase kinase 4	ENSMUST00000089058.7|Map3k4|ENSMUSG00000014426.10|mitogen-activated protein kinase kinase kinase 4
mm39_v1_chr15_+_100366886_100366954	0.202782	UACAGUA	ENSMUST00000037001.10|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1	ENSMUST00000230294.2|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1
mm39_v1_chr5_+_150597204_150597269	0.200733	UACAGUA	ENSMUST00000202170.4|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B	ENSMUST00000016569.11|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B
mm39_v1_chr6_-_51446752_51446834	0.200331	UACAGUA	ENSMUST00000204188.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000203220.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000114459.8|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000090002.10|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr18_+_36098090_36098165	0.200202	UACAGUA	ENSMUST00000176873.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000177432.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000175734.2|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2
mm39_v1_chr5_-_38377746_38377801	0.199266	UACAGUA	ENSMUST00000114113.3|Zbtb49|ENSMUSG00000029127.16|zinc finger and BTB domain containing 49	ENSMUST00000094833.10|Zbtb49|ENSMUSG00000029127.16|zinc finger and BTB domain containing 49
mm39_v1_chr1_+_82817170_82817239	0.198771	UACAGUA	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr2_+_103254401_103254421	0.192813	UACAGUA	ENSMUST00000028609.14|Elf5|ENSMUSG00000027186.16|E74-like factor 5
mm39_v1_chr8_-_91074971_91075014	0.189636	UACAGUA	ENSMUST00000109621.10|Tox3|ENSMUSG00000043668.14|TOX high mobility group box family member 3
mm39_v1_chr2_+_81883566_81883655	0.186762	UACAGUA	ENSMUST00000047527.8|Zfp804a|ENSMUSG00000070866.5|zinc finger protein 804A
mm39_v1_chr2_-_37249247_37249344	0.184362	UACAGUA	ENSMUST00000112940.8|Pdcl|ENSMUSG00000009030.15|phosducin-like	ENSMUST00000009174.15|Pdcl|ENSMUSG00000009030.15|phosducin-like
mm39_v1_chr14_-_30075424_30075492	0.184204	UACAGUA	ENSMUST00000224198.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000238675.2|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000112249.10|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000224785.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr1_+_172168764_172168785	0.17691	UACAGUA	ENSMUST00000056136.4|Kcnj10|ENSMUSG00000044708.6|potassium inwardly-rectifying channel, subfamily J, member 10
mm39_v1_chr2_-_156833932_156834053	0.176305	UACAGUA	ENSMUST00000109558.2|Ndrg3|ENSMUSG00000027634.15|N-myc downstream regulated gene 3	ENSMUST00000069600.13|Ndrg3|ENSMUSG00000027634.15|N-myc downstream regulated gene 3	ENSMUST00000072298.13|Ndrg3|ENSMUSG00000027634.15|N-myc downstream regulated gene 3
mm39_v1_chr15_+_66449385_66449487	0.167208	UACAGUA	ENSMUST00000230882.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000048188.10|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000230948.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000229160.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1
mm39_v1_chr1_-_133589020_133589148	0.159419	UACAGUA	ENSMUST00000193504.6|Zc3h11a|ENSMUSG00000102976.7|zinc finger CCCH type containing 11A	ENSMUST00000195067.2|Zc3h11a|ENSMUSG00000102976.7|zinc finger CCCH type containing 11A	ENSMUST00000191896.6|Zc3h11a|ENSMUSG00000102976.7|zinc finger CCCH type containing 11A	ENSMUST00000179598.4|Gm38394|ENSMUSG00000094410.9|predicted gene, 38394	ENSMUST00000194668.6|Zc3h11a|ENSMUSG00000102976.7|zinc finger CCCH type containing 11A	ENSMUST00000195424.6|Zc3h11a|ENSMUSG00000102976.7|zinc finger CCCH type containing 11A	ENSMUST00000027736.13|Zc3h11a|ENSMUSG00000116275.2|zinc finger CCCH type containing 11A
mm39_v1_chr1_+_64571942_64572013	0.157038	UACAGUA	ENSMUST00000171164.8|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000187811.7|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000049932.12|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000087366.11|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr14_-_45556018_45556036	0.146519	UACAGUA	ENSMUST00000022378.9|Ero1a|ENSMUSG00000021831.10|endoplasmic reticulum oxidoreductase 1 alpha
mm39_v1_chr14_-_122202599_122202610	0.145988	UACAGUA	ENSMUST00000049872.9|Gpr183|ENSMUSG00000051212.9|G protein-coupled receptor 183
mm39_v1_chr7_+_65759198_65759263	0.144926	UACAGUA	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr5_-_113311185_113311217	0.144786	UACAGUA	ENSMUST00000050125.9|2900026A02Rik|ENSMUSG00000051339.11|RIKEN cDNA 2900026A02 gene
mm39_v1_chr9_-_94420128_94420142	0.14392	UACAGUA	ENSMUST00000113028.2|Dipk2a|ENSMUSG00000045414.8|divergent protein kinase domain 2A
mm39_v1_chr8_-_26505605_26505678	0.132916	UACAGUA	ENSMUST00000016138.11|Fnta|ENSMUSG00000015994.11|farnesyltransferase, CAAX box, alpha
mm39_v1_chr4_-_126323291_126323349	0.128334	UACAGUA	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr2_+_52747855_52747880	0.126533	UACAGUA	ENSMUST00000155586.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000090952.11|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000127122.9|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000049483.14|Fmnl2|ENSMUSG00000036053.18|formin-like 2	ENSMUST00000050719.13|Fmnl2|ENSMUSG00000036053.18|formin-like 2
mm39_v1_chr13_-_103470937_103471007	0.126006	UACAGUA	ENSMUST00000167058.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4	ENSMUST00000164111.2|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr11_-_95200382_95200428	0.116208	UACAGUA	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr3_+_66127330_66127348	0.112555	UACAGUA	ENSMUST00000029421.6|Ptx3|ENSMUSG00000027832.6|pentraxin related gene
mm39_v1_chr18_-_4352944_4353015	0.111401	UACAGUA	ENSMUST00000025078.10|Map3k8|ENSMUSG00000024235.12|mitogen-activated protein kinase kinase kinase 8
mm39_v1_chr1_-_134260666_134260666	0.105337	UACAGUA	ENSMUST00000168515.8|Ppfia4|ENSMUSG00000026458.14|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	ENSMUST00000189361.2|Ppfia4|ENSMUSG00000026458.14|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm39_v1_chr7_-_79765042_79765140	0.104537	UACAGUA	ENSMUST00000206714.2|Idh2|ENSMUSG00000030541.17|isocitrate dehydrogenase 2 (NADP+), mitochondrial	ENSMUST00000107384.10|Idh2|ENSMUSG00000030541.17|isocitrate dehydrogenase 2 (NADP+), mitochondrial
mm39_v1_chr9_-_50920236_50920380	0.104521	UACAGUA	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr15_+_99936516_99936552	0.102962	UACAGUA	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr14_-_33169099_33169138	0.1009	UACAGUA	ENSMUST00000111944.10|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000022504.12|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000111945.9|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8
mm39_v1_chr1_+_180553569_180553669	0.0995604	UACAGUA	ENSMUST00000027780.6|Acbd3|ENSMUSG00000026499.6|acyl-Coenzyme A binding domain containing 3
mm39_v1_chr9_+_70114623_70114650	0.0885608	UACAGUA	ENSMUST00000034745.9|Myo1e|ENSMUSG00000032220.11|myosin IE
mm39_v1_chr4_+_57434247_57434369	0.0882653	UACAGUA	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chr16_-_90841360_90841431	0.086589	UACAGUA	ENSMUST00000118522.8|Paxbp1|ENSMUSG00000022974.13|PAX3 and PAX7 binding protein 1
mm39_v1_chr8_-_47805383_47805401	0.085972	UACAGUA	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr16_-_37205277_37205293	0.0837167	UACAGUA	ENSMUST00000114787.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like	ENSMUST00000114782.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like	ENSMUST00000114775.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like
mm39_v1_chr13_-_96807346_96807444	0.0828418	UACAGUA	ENSMUST00000022176.15|Hmgcr|ENSMUSG00000021670.15|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm39_v1_chr1_-_158785937_158785937	0.0789882	UACAGUA	ENSMUST00000159861.9|Pappa2|ENSMUSG00000073530.12|pappalysin 2
mm39_v1_chr18_+_44513547_44513644	0.0744997	UACAGUA	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr3_-_116506294_116506302	0.073076	UACAGUA	ENSMUST00000029569.9|Slc35a3|ENSMUSG00000027957.14|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm39_v1_chr3_-_97134680_97134738	0.0729397	UACAGUA	ENSMUST00000046521.14|Bcl9|ENSMUSG00000038256.16|B cell CLL/lymphoma 9
mm39_v1_chrX_+_133501928_133502035	0.0719312	UACAGUA	ENSMUST00000074950.11|Hnrnph2|ENSMUSG00000045427.14|heterogeneous nuclear ribonucleoprotein H2	ENSMUST00000113203.2|Hnrnph2|ENSMUSG00000045427.14|heterogeneous nuclear ribonucleoprotein H2	ENSMUST00000113202.8|Hnrnph2|ENSMUSG00000045427.14|heterogeneous nuclear ribonucleoprotein H2	ENSMUST00000050331.13|Hnrnph2|ENSMUSG00000045427.14|heterogeneous nuclear ribonucleoprotein H2	ENSMUST00000059297.6|Hnrnph2|ENSMUSG00000045427.14|heterogeneous nuclear ribonucleoprotein H2
mm39_v1_chr18_-_6490808_6490867	0.0652051	UACAGUA	ENSMUST00000028100.13|Epc1|ENSMUSG00000024240.14|enhancer of polycomb homolog 1	ENSMUST00000050542.6|Epc1|ENSMUSG00000024240.14|enhancer of polycomb homolog 1
mm39_v1_chr4_-_82777746_82777917	0.0510785	UACAGUA	ENSMUST00000156055.2|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21	ENSMUST00000030110.15|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr9_+_118755521_118755636	0.0500502	UACAGUA	ENSMUST00000073109.12|Ctdspl|ENSMUSG00000047409.14|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm39_v1_chr16_+_91444730_91444794	0.0432335	UACAGUA	ENSMUST00000119368.8|Son|ENSMUSG00000022961.19|Son DNA binding protein	ENSMUST00000114037.9|Son|ENSMUSG00000022961.19|Son DNA binding protein	ENSMUST00000114036.9|Son|ENSMUSG00000022961.19|Son DNA binding protein	ENSMUST00000122302.8|Son|ENSMUSG00000022961.19|Son DNA binding protein
mm39_v1_chr3_-_104419128_104419250	0.0399708	UACAGUA	ENSMUST00000199070.5|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000046316.11|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000198332.2|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2
mm39_v1_chr4_+_8535604_8535717	0.0393862	UACAGUA	ENSMUST00000060232.8|Rab2a|ENSMUSG00000047187.10|RAB2A, member RAS oncogene family
mm39_v1_chr18_-_73836810_73836877	0.0347417	UACAGUA	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr2_-_167334746_167334812	0.0253005	UACAGUA	ENSMUST00000109211.9|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2	ENSMUST00000057627.16|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2
mm39_v1_chr3_+_16237371_16237447	0.0227853	UACAGUA	ENSMUST00000108345.9|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000191774.6|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000108346.5|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3
mm39_v1_chr18_-_24153805_24153876	0.0186921	UACAGUA	ENSMUST00000066497.12|Zfp24|ENSMUSG00000051469.15|zinc finger protein 24
mm39_v1_chr3_-_115800989_115801060	0.0163294	UACAGUA	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr7_-_144107401_144107533	0.0147582	UACAGUA	ENSMUST00000168134.10|Ppfia1|ENSMUSG00000037519.18|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm39_v1_chr4_-_137084973_137085033	0.013899	UACAGUA	ENSMUST00000030417.10|Cdc42|ENSMUSG00000006699.18|cell division cycle 42	ENSMUST00000051477.13|Cdc42|ENSMUSG00000006699.18|cell division cycle 42
mm39_v1_chr11_-_74615496_74615530	0.0130266	UACAGUA	ENSMUST00000021091.15|Pafah1b1|ENSMUSG00000020745.16|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm39_v1_chr6_-_91450486_91450534	0.011593	UACAGUA	ENSMUST00000040835.9|Chchd4|ENSMUSG00000034203.9|coiled-coil-helix-coiled-coil-helix domain containing 4
mm39_v1_chr7_-_70010341_70010494	0.00668389	UACAGUA	ENSMUST00000032768.15|Nr2f2|ENSMUSG00000030551.15|nuclear receptor subfamily 2, group F, member 2
mm39_v1_chr3_+_88857929_88857975	0.00428802	UACAGUA	ENSMUST00000186583.7|Ash1l|ENSMUSG00000028053.14|ASH1 like histone lysine methyltransferase
mm39_v1_chr2_-_24809583_24809628	0.00355838	UACAGUA	ENSMUST00000046227.12|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000114432.9|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000091348.11|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000102938.10|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000150379.2|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000152161.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000147147.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1
mm39_v1_chr2_-_34262012_34262056	0.00185304	UACAGUA	ENSMUST00000113132.9|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3	ENSMUST00000040638.15|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3
