mm39_v1_chr16_-_42160957_42161014	8.1184	UGGCACU	ENSMUST00000102817.5|Gap43|ENSMUSG00000047261.10|growth associated protein 43
mm39_v1_chr1_+_74894069_74894104	7.17585	UGGCACU	ENSMUST00000160379.4|Cdk5r2|ENSMUSG00000090071.5|cyclin-dependent kinase 5, regulatory subunit 2 (p39)
mm39_v1_chr18_+_64387428_64387457	6.76832	UGGCACU	ENSMUST00000025477.15|St8sia3|ENSMUSG00000056812.15|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm39_v1_chr11_+_56902624_56902653	6.40787	UGGCACU	ENSMUST00000036315.16|Gria1|ENSMUSG00000020524.17|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm39_v1_chr1_+_66214445_66214508	6.36343	UGGCACU	ENSMUST00000114017.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2	ENSMUST00000114015.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr15_-_91457383_91457464	6.01829	UGGCACU	ENSMUST00000109283.2|Slc2a13|ENSMUSG00000036298.11|solute carrier family 2 (facilitated glucose transporter), member 13
mm39_v1_chr19_+_28812474_28812541	5.97825	UGGCACU	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr8_+_55407872_55407889	5.94429	UGGCACU	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr2_-_155356716_155356775	5.65802	UGGCACU	ENSMUST00000029131.11|Ggt7|ENSMUSG00000027603.16|gamma-glutamyltransferase 7
mm39_v1_chr19_+_47003111_47003137	5.49866	UGGCACU	ENSMUST00000037636.4|Ina|ENSMUSG00000034336.4|internexin neuronal intermediate filament protein, alpha
mm39_v1_chr3_+_8574420_8574620	5.33286	UGGCACU	ENSMUST00000029002.9|Stmn2|ENSMUSG00000027500.11|stathmin-like 2
mm39_v1_chr1_-_154602102_154602132	5.27057	UGGCACU	ENSMUST00000187541.7|Cacna1e|ENSMUSG00000004110.18|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm39_v1_chrX_+_165021897_165021909	5.03271	UGGCACU	ENSMUST00000112235.8|Gpm6b|ENSMUSG00000031342.18|glycoprotein m6b
mm39_v1_chr2_+_61634797_61634890	4.81857	UGGCACU	ENSMUST00000048934.15|Tbr1|ENSMUSG00000035033.16|T-box brain transcription factor 1
mm39_v1_chr1_-_38937061_38937091	4.63496	UGGCACU	ENSMUST00000027249.12|Chst10|ENSMUSG00000026080.14|carbohydrate sulfotransferase 10
mm39_v1_chr2_+_92430043_92430069	4.56654	UGGCACU	ENSMUST00000065797.7|Chst1|ENSMUSG00000027221.6|carbohydrate sulfotransferase 1
mm39_v1_chr4_+_152423075_152423166	4.52872	UGGCACU	ENSMUST00000030775.12|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5	ENSMUST00000164662.8|Chd5|ENSMUSG00000005045.17|chromodomain helicase DNA binding protein 5
mm39_v1_chr8_+_14145848_14145931	4.45898	UGGCACU	ENSMUST00000152652.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2	ENSMUST00000133298.8|Dlgap2|ENSMUSG00000047495.16|DLG associated protein 2
mm39_v1_chr6_-_113478779_113478910	4.44412	UGGCACU	ENSMUST00000101059.4|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204268.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205170.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000205075.2|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3	ENSMUST00000204134.3|Prrt3|ENSMUSG00000045009.10|proline-rich transmembrane protein 3
mm39_v1_chr1_+_75456173_75456348	4.35139	UGGCACU	ENSMUST00000113575.9|Tmem198|ENSMUSG00000051703.15|transmembrane protein 198	ENSMUST00000148980.2|Tmem198|ENSMUSG00000051703.15|transmembrane protein 198	ENSMUST00000050899.7|Tmem198|ENSMUSG00000051703.15|transmembrane protein 198	ENSMUST00000187411.2|Tmem198|ENSMUSG00000051703.15|transmembrane protein 198
mm39_v1_chr16_-_67417768_67417810	4.34874	UGGCACU	ENSMUST00000114292.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2	ENSMUST00000120898.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2
mm39_v1_chr19_+_60744385_60744432	4.3372	UGGCACU	ENSMUST00000088237.6|Nanos1|ENSMUSG00000072437.5|nanos C2HC-type zinc finger 1
mm39_v1_chr2_-_92222979_92223076	4.3066	UGGCACU	ENSMUST00000111279.9|Mapk8ip1|ENSMUSG00000027223.16|mitogen-activated protein kinase 8 interacting protein 1
mm39_v1_chr5_+_34153328_34153375	4.27348	UGGCACU	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr5_+_146321757_146321804	4.24525	UGGCACU	ENSMUST00000016143.9|Wasf3|ENSMUSG00000029636.12|WASP family, member 3
mm39_v1_chr5_+_144482693_144482712	4.20784	UGGCACU	ENSMUST00000071782.8|Nptx2|ENSMUSG00000059991.8|neuronal pentraxin 2
mm39_v1_chr14_+_27344385_27344500	4.19565	UGGCACU	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr9_-_73876182_73876281	4.18393	UGGCACU	ENSMUST00000184666.8|Unc13c|ENSMUSG00000062151.14|unc-13 homolog C
mm39_v1_chr1_+_20960819_20960841	4.07681	UGGCACU	ENSMUST00000189400.7|Paqr8|ENSMUSG00000025931.16|progestin and adipoQ receptor family member VIII
mm39_v1_chr7_+_15864265_15864290	4.04718	UGGCACU	ENSMUST00000168693.3|Slc8a2|ENSMUSG00000030376.9|solute carrier family 8 (sodium/calcium exchanger), member 2
mm39_v1_chr3_-_125732255_125732268	3.96987	UGGCACU	ENSMUST00000057944.12|Ugt8a|ENSMUSG00000032854.13|UDP galactosyltransferase 8A
mm39_v1_chr3_-_158267771_158267939	3.91848	UGGCACU	ENSMUST00000199890.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000238317.3|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000200137.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000106044.6|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7
mm39_v1_chr1_+_172168764_172168785	3.88937	UGGCACU	ENSMUST00000056136.4|Kcnj10|ENSMUSG00000044708.6|potassium inwardly-rectifying channel, subfamily J, member 10
mm39_v1_chr17_+_69463786_69463845	3.8623	UGGCACU	ENSMUST00000112680.8|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000080208.7|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000225977.2|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3
mm39_v1_chr14_-_109151590_109151615	3.81937	UGGCACU	ENSMUST00000100322.4|Slitrk1|ENSMUSG00000075478.4|SLIT and NTRK-like family, member 1
mm39_v1_chr8_+_114932312_114932411	3.69671	UGGCACU	ENSMUST00000049509.7|Vat1l|ENSMUSG00000046844.7|vesicle amine transport protein 1 like	ENSMUST00000150963.2|Vat1l|ENSMUSG00000046844.7|vesicle amine transport protein 1 like
mm39_v1_chr4_+_138181616_138181643	3.6885	UGGCACU	ENSMUST00000050918.4|Camk2n1|ENSMUSG00000046447.4|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm39_v1_chr5_-_8672951_8672970	3.65597	UGGCACU	ENSMUST00000047485.15|Rundc3b|ENSMUSG00000040570.15|RUN domain containing 3B	ENSMUST00000115378.2|Rundc3b|ENSMUSG00000040570.15|RUN domain containing 3B
mm39_v1_chr3_+_145464413_145464451	3.63989	UGGCACU	ENSMUST00000029845.15|Ddah1|ENSMUSG00000028194.16|dimethylarginine dimethylaminohydrolase 1
mm39_v1_chr5_-_140634773_140634807	3.59375	UGGCACU	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr9_-_57513510_57513564	3.43123	UGGCACU	ENSMUST00000215487.2|Cplx3|ENSMUSG00000039714.10|complexin 3	ENSMUST00000045068.10|Cplx3|ENSMUSG00000039714.10|complexin 3
mm39_v1_chr1_+_63485002_63485102	3.38169	UGGCACU	ENSMUST00000087374.10|Adam23|ENSMUSG00000025964.16|a disintegrin and metallopeptidase domain 23
mm39_v1_chr9_-_70048766_70048860	3.2396	UGGCACU	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr2_+_71811526_71811631	3.21226	UGGCACU	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr1_-_158183894_158183914	3.2106	UGGCACU	ENSMUST00000004133.11|Brinp2|ENSMUSG00000004031.14|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm39_v1_chr15_-_71599664_71599697	3.1929	UGGCACU	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr3_+_61269059_61269059	3.14062	UGGCACU	ENSMUST00000049064.4|Rap2b|ENSMUSG00000036894.4|RAP2B, member of RAS oncogene family
mm39_v1_chr11_-_87249837_87249901	3.13295	UGGCACU	ENSMUST00000055438.5|Ppm1e|ENSMUSG00000046442.5|protein phosphatase 1E (PP2C domain containing)
mm39_v1_chr1_-_127605660_127605758	3.03879	UGGCACU	ENSMUST00000160616.8|Tmem163|ENSMUSG00000026347.14|transmembrane protein 163
mm39_v1_chr11_+_94881861_94881916	2.81079	UGGCACU	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chr13_-_95386776_95386844	2.71769	UGGCACU	ENSMUST00000162153.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000160957.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000159598.2|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000162412.8|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B
mm39_v1_chr11_+_79482005_79482047	2.67117	UGGCACU	ENSMUST00000017783.13|Rab11fip4|ENSMUSG00000017639.14|RAB11 family interacting protein 4 (class II)
mm39_v1_chr7_+_118311740_118311795	2.64506	UGGCACU	ENSMUST00000106557.8|Ccp110|ENSMUSG00000033904.17|centriolar coiled coil protein 110
mm39_v1_chr2_-_33261411_33261496	2.61426	UGGCACU	ENSMUST00000131298.7|Ralgps1|ENSMUSG00000038831.17|Ral GEF with PH domain and SH3 binding motif 1	ENSMUST00000091039.5|Ralgps1|ENSMUSG00000038831.17|Ral GEF with PH domain and SH3 binding motif 1	ENSMUST00000042615.13|Ralgps1|ENSMUSG00000038831.17|Ral GEF with PH domain and SH3 binding motif 1
mm39_v1_chr10_+_127000991_127001095	2.5311	UGGCACU	ENSMUST00000006914.11|B4galnt1|ENSMUSG00000006731.11|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm39_v1_chr6_+_4903299_4903347	2.51845	UGGCACU	ENSMUST00000035813.9|Ppp1r9a|ENSMUSG00000032827.16|protein phosphatase 1, regulatory subunit 9A
mm39_v1_chr1_-_3741721_3741721	2.48098	UGGCACU	ENSMUST00000070533.5|Xkr4|ENSMUSG00000051951.6|X-linked Kx blood group related 4
mm39_v1_chr15_-_63932288_63932327	2.40519	UGGCACU	ENSMUST00000063838.11|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B	ENSMUST00000228908.2|Cyrib|ENSMUSG00000022378.15|CYFIP related Rac1 interactor B
mm39_v1_chr7_-_35453818_35453879	2.39063	UGGCACU	ENSMUST00000051377.15|Dpy19l3|ENSMUSG00000043671.15|dpy-19-like 3 (C. elegans)
mm39_v1_chr2_-_37537224_37537297	2.36525	UGGCACU	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr16_+_8331293_8331361	2.3265	UGGCACU	ENSMUST00000065987.14|Abat|ENSMUSG00000057880.13|4-aminobutyrate aminotransferase	ENSMUST00000115838.8|Abat|ENSMUSG00000057880.13|4-aminobutyrate aminotransferase	ENSMUST00000115839.9|Abat|ENSMUSG00000057880.13|4-aminobutyrate aminotransferase
mm39_v1_chr16_+_38722666_38722678	2.31687	UGGCACU	ENSMUST00000023478.8|Igsf11|ENSMUSG00000022790.15|immunoglobulin superfamily, member 11
mm39_v1_chr11_+_17109263_17109404	2.30837	UGGCACU	ENSMUST00000102880.5|Ppp3r1|ENSMUSG00000033953.11|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm39_v1_chr12_+_102095260_102095433	2.28818	UGGCACU	ENSMUST00000079020.12|Slc24a4|ENSMUSG00000041771.15|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm39_v1_chr8_+_84626715_84626740	2.25795	UGGCACU	ENSMUST00000141158.8|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1
mm39_v1_chr7_+_90739904_90739959	2.1746	UGGCACU	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr11_-_97913420_97913496	2.04977	UGGCACU	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr10_-_33500583_33500765	2.04111	UGGCACU	ENSMUST00000161692.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000160299.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000019920.13|Clvs2|ENSMUSG00000019785.15|clavesin 2
mm39_v1_chr2_-_163760603_163760603	2.03908	UGGCACU	ENSMUST00000044734.3|Rims4|ENSMUSG00000035226.6|regulating synaptic membrane exocytosis 4
mm39_v1_chr11_-_45835737_45835787	2.03541	UGGCACU	ENSMUST00000129820.8|Lsm11|ENSMUSG00000044847.14|U7 snRNP-specific Sm-like protein LSM11
mm39_v1_chr1_-_25267894_25267916	2.01059	UGGCACU	ENSMUST00000126626.8|Adgrb3|ENSMUSG00000033569.18|adhesion G protein-coupled receptor B3
mm39_v1_chr4_-_25800083_25800146	1.87875	UGGCACU	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr9_-_62719208_62719229	1.85162	UGGCACU	ENSMUST00000034775.10|Fem1b|ENSMUSG00000032244.10|fem 1 homolog b
mm39_v1_chr6_-_85479962_85480016	1.84518	UGGCACU	ENSMUST00000159062.8|Fbxo41|ENSMUSG00000047013.16|F-box protein 41
mm39_v1_chr10_+_111000613_111000627	1.80238	UGGCACU	ENSMUST00000105275.9|Osbpl8|ENSMUSG00000020189.16|oxysterol binding protein-like 8
mm39_v1_chr11_-_85125889_85125963	1.78554	UGGCACU	ENSMUST00000018625.10|Appbp2|ENSMUSG00000018481.10|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm39_v1_chr17_-_72910822_72910822	1.77888	UGGCACU	ENSMUST00000086639.6|Alk|ENSMUSG00000055471.8|anaplastic lymphoma kinase
mm39_v1_chr14_+_60502629_60502793	1.76379	UGGCACU	ENSMUST00000022563.9|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6	ENSMUST00000224366.2|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6
mm39_v1_chr7_+_25005510_25005582	1.74683	UGGCACU	ENSMUST00000119703.8|Tmem145|ENSMUSG00000043843.18|transmembrane protein 145	ENSMUST00000205639.3|Tmem145|ENSMUSG00000043843.18|transmembrane protein 145	ENSMUST00000108409.2|Tmem145|ENSMUSG00000043843.18|transmembrane protein 145
mm39_v1_chr3_+_129974531_129974548	1.74471	UGGCACU	ENSMUST00000080335.11|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1	ENSMUST00000106353.2|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1
mm39_v1_chr17_+_86475205_86475223	1.71101	UGGCACU	ENSMUST00000097275.9|Prkce|ENSMUSG00000045038.15|protein kinase C, epsilon
mm39_v1_chr2_-_6889783_6889807	1.70668	UGGCACU	ENSMUST00000170438.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114924.10|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114934.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr16_+_16714333_16714462	1.70027	UGGCACU	ENSMUST00000027373.12|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)	ENSMUST00000232247.2|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)
mm39_v1_chr4_-_63414188_63414270	1.68332	UGGCACU	ENSMUST00000063650.10|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000102867.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000107393.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000084510.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000095038.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000119294.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000095037.2|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000063672.10|Whrn|ENSMUSG00000039137.19|whirlin
mm39_v1_chr4_+_106418224_106418235	1.67827	UGGCACU	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr10_+_39245746_39245808	1.67513	UGGCACU	ENSMUST00000063091.13|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000099967.10|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000126486.8|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene
mm39_v1_chr4_-_153567221_153567268	1.6528	UGGCACU	ENSMUST00000105646.3|Ajap1|ENSMUSG00000039546.10|adherens junction associated protein 1
mm39_v1_chr1_-_64995982_64995994	1.63738	UGGCACU	ENSMUST00000097713.2|Plekhm3|ENSMUSG00000051344.14|pleckstrin homology domain containing, family M, member 3
mm39_v1_chr3_-_153430741_153430816	1.61387	UGGCACU	ENSMUST00000064460.7|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	ENSMUST00000200397.5|St6galnac3|ENSMUSG00000052544.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm39_v1_chr10_+_85222677_85222704	1.52986	UGGCACU	ENSMUST00000105307.8|Btbd11|ENSMUSG00000020042.16|BTB (POZ) domain containing 11	ENSMUST00000020231.10|Btbd11|ENSMUSG00000020042.16|BTB (POZ) domain containing 11
mm39_v1_chr6_-_143892814_143892837	1.51431	UGGCACU	ENSMUST00000124233.7|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000144289.4|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111748.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr2_-_113844100_113844116	1.48954	UGGCACU	ENSMUST00000090275.5|Gjd2|ENSMUSG00000068615.5|gap junction protein, delta 2
mm39_v1_chr14_+_34542053_34542108	1.42164	UGGCACU	ENSMUST00000043349.7|Grid1|ENSMUSG00000041078.8|glutamate receptor, ionotropic, delta 1
mm39_v1_chr12_+_76450941_76451038	1.42027	UGGCACU	ENSMUST00000080449.7|Hspa2|ENSMUSG00000059970.8|heat shock protein 2
mm39_v1_chrX_-_166906307_166906330	1.41773	UGGCACU	ENSMUST00000112149.9|Frmpd4|ENSMUSG00000049176.17|FERM and PDZ domain containing 4
mm39_v1_chr11_+_109540201_109540264	1.41258	UGGCACU	ENSMUST00000106677.8|Prkar1a|ENSMUSG00000020612.17|protein kinase, cAMP dependent regulatory, type I, alpha
mm39_v1_chr4_-_24800890_24800890	1.3983	UGGCACU	ENSMUST00000108214.9|Klhl32|ENSMUSG00000040387.17|kelch-like 32
mm39_v1_chr9_-_81515865_81515892	1.38218	UGGCACU	ENSMUST00000183482.2|Htr1b|ENSMUSG00000049511.6|5-hydroxytryptamine (serotonin) receptor 1B
mm39_v1_chr7_-_125799644_125799673	1.38151	UGGCACU	ENSMUST00000168189.8|Xpo6|ENSMUSG00000000131.16|exportin 6
mm39_v1_chr3_-_10505113_10505185	1.37544	UGGCACU	ENSMUST00000029047.12|Snx16|ENSMUSG00000027534.17|sorting nexin 16	ENSMUST00000195822.2|Snx16|ENSMUSG00000027534.17|sorting nexin 16	ENSMUST00000099223.11|Snx16|ENSMUSG00000027534.17|sorting nexin 16
mm39_v1_chr3_+_33853941_33853981	1.36556	UGGCACU	ENSMUST00000099153.10|Ttc14|ENSMUSG00000027677.18|tetratricopeptide repeat domain 14
mm39_v1_chr3_-_108322868_108322868	1.35684	UGGCACU	ENSMUST00000090558.10|Celsr2|ENSMUSG00000068740.14|cadherin, EGF LAG seven-pass G-type receptor 2
mm39_v1_chr12_+_112688597_112688673	1.34576	UGGCACU	ENSMUST00000101018.11|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000092279.7|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000179041.8|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B	ENSMUST00000222711.2|Cep170b|ENSMUSG00000072825.12|centrosomal protein 170B
mm39_v1_chr6_-_53045546_53045640	1.34559	UGGCACU	ENSMUST00000074541.6|Jazf1|ENSMUSG00000063568.12|JAZF zinc finger 1
mm39_v1_chr9_-_64160899_64160918	1.33127	UGGCACU	ENSMUST00000005066.9|Map2k1|ENSMUSG00000004936.9|mitogen-activated protein kinase kinase 1
mm39_v1_chr11_-_98220466_98220482	1.32381	UGGCACU	ENSMUST00000041685.7|Neurod2|ENSMUSG00000038255.7|neurogenic differentiation 2
mm39_v1_chr2_-_31735937_31736017	1.32371	UGGCACU	ENSMUST00000028188.8|Fibcd1|ENSMUSG00000026841.8|fibrinogen C domain containing 1
mm39_v1_chr8_+_4216556_4216739	1.30479	UGGCACU	ENSMUST00000239400.2|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000177053.8|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176149.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176072.9|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like	ENSMUST00000176825.3|Evi5l|ENSMUSG00000011832.17|ecotropic viral integration site 5 like
mm39_v1_chr5_-_33011530_33011600	1.28844	UGGCACU	ENSMUST00000130134.3|Prr14l|ENSMUSG00000054280.15|proline rich 14-like	ENSMUST00000120129.9|Prr14l|ENSMUSG00000054280.15|proline rich 14-like
mm39_v1_chr2_-_125624754_125624790	1.28497	UGGCACU	ENSMUST00000053699.13|Secisbp2l|ENSMUSG00000035093.17|SECIS binding protein 2-like
mm39_v1_chr2_-_32321116_32321186	1.2681	UGGCACU	ENSMUST00000127961.3|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000136361.8|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000052119.14|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm39_v1_chr13_-_8921732_8921945	1.26483	UGGCACU	ENSMUST00000054251.13|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37	ENSMUST00000176813.8|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37	ENSMUST00000175958.2|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37
mm39_v1_chr2_-_134486039_134486065	1.25508	UGGCACU	ENSMUST00000038228.11|Tmx4|ENSMUSG00000034723.12|thioredoxin-related transmembrane protein 4
mm39_v1_chr3_-_9898713_9898739	1.2521	UGGCACU	ENSMUST00000161949.8|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr1_+_163757334_163757403	1.23158	UGGCACU	ENSMUST00000027876.11|Scyl3|ENSMUSG00000026584.15|SCY1-like 3 (S. cerevisiae)	ENSMUST00000170359.8|Scyl3|ENSMUSG00000026584.15|SCY1-like 3 (S. cerevisiae)
mm39_v1_chr9_+_120132962_120133026	1.2265	UGGCACU	ENSMUST00000048121.13|Myrip|ENSMUSG00000041794.14|myosin VIIA and Rab interacting protein
mm39_v1_chr5_+_93241287_93241310	1.19813	UGGCACU	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr2_+_112097087_112097207	1.17661	UGGCACU	ENSMUST00000110987.9|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6	ENSMUST00000028549.14|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6
mm39_v1_chr12_-_100995242_100995302	1.16069	UGGCACU	ENSMUST00000085096.10|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chrX_-_135769285_135769504	1.16059	UGGCACU	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chr2_+_22512195_22512217	1.16001	UGGCACU	ENSMUST00000028123.4|Gad2|ENSMUSG00000026787.4|glutamic acid decarboxylase 2
mm39_v1_chr14_-_55019387_55019411	1.15792	UGGCACU	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr14_+_122712809_122712847	1.15291	UGGCACU	ENSMUST00000075888.6|Zic2|ENSMUSG00000061524.9|zinc finger protein of the cerebellum 2
mm39_v1_chr7_+_18659787_18659826	1.14708	UGGCACU	ENSMUST00000032571.10|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2	ENSMUST00000220302.2|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2
mm39_v1_chr6_-_37276885_37276919	1.13567	UGGCACU	ENSMUST00000101532.10|Dgki|ENSMUSG00000038665.16|diacylglycerol kinase, iota
mm39_v1_chr15_-_81074921_81074968	1.1199	UGGCACU	ENSMUST00000131235.9|Mrtfa|ENSMUSG00000042292.19|myocardin related transcription factor A	ENSMUST00000134469.9|Mrtfa|ENSMUSG00000042292.19|myocardin related transcription factor A	ENSMUST00000239114.2|Mrtfa|ENSMUSG00000042292.19|myocardin related transcription factor A	ENSMUST00000149582.8|Mrtfa|ENSMUSG00000042292.19|myocardin related transcription factor A
mm39_v1_chr3_-_107425316_107425339	1.10393	UGGCACU	ENSMUST00000169449.8|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17	ENSMUST00000029499.15|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17
mm39_v1_chr2_-_52566583_52566601	1.07645	UGGCACU	ENSMUST00000178799.8|Cacnb4|ENSMUSG00000017412.16|calcium channel, voltage-dependent, beta 4 subunit
mm39_v1_chr14_+_121272950_121272990	1.07442	UGGCACU	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr11_+_31822211_31822263	1.06922	UGGCACU	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr14_+_79663850_79663951	1.06613	UGGCACU	ENSMUST00000061222.9|Kbtbd7|ENSMUSG00000043881.10|kelch repeat and BTB (POZ) domain containing 7
mm39_v1_chr13_+_93444514_93444542	1.02926	UGGCACU	ENSMUST00000079086.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr10_+_112107026_112107026	1.02537	UGGCACU	ENSMUST00000219301.2|Kcnc2|ENSMUSG00000035681.8|potassium voltage gated channel, Shaw-related subfamily, member 2	ENSMUST00000092175.4|Kcnc2|ENSMUSG00000035681.8|potassium voltage gated channel, Shaw-related subfamily, member 2
mm39_v1_chr3_+_108191398_108191458	1.01236	UGGCACU	ENSMUST00000135636.6|Sort1|ENSMUSG00000068747.15|sortilin 1	ENSMUST00000102632.7|Sort1|ENSMUSG00000068747.15|sortilin 1
mm39_v1_chr15_-_79718423_79718447	1.00238	UGGCACU	ENSMUST00000109623.8|Cbx6|ENSMUSG00000089715.13|chromobox 6	ENSMUST00000023060.13|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000089299.6|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000109625.8|Cbx6|ENSMUSG00000089715.13|chromobox 6
mm39_v1_chr4_+_28813125_28813139	0.991914	UGGCACU	ENSMUST00000080934.11|Epha7|ENSMUSG00000028289.13|Eph receptor A7	ENSMUST00000029964.12|Epha7|ENSMUSG00000028289.13|Eph receptor A7
mm39_v1_chr6_+_86826470_86826577	0.973928	UGGCACU	ENSMUST00000089519.13|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1	ENSMUST00000204414.3|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1
mm39_v1_chr13_+_55517545_55517589	0.940821	UGGCACU	ENSMUST00000063771.14|Rgs14|ENSMUSG00000052087.15|regulator of G-protein signaling 14
mm39_v1_chr19_+_26582450_26582519	0.933396	UGGCACU	ENSMUST00000176769.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208163.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000025862.15|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176030.8|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chrX_+_100683662_100683714	0.894968	UGGCACU	ENSMUST00000119299.8|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	ENSMUST00000044475.5|Ogt|ENSMUSG00000034160.14|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm39_v1_chr3_-_19217174_19217249	0.887281	UGGCACU	ENSMUST00000029125.10|Armc1|ENSMUSG00000027599.10|armadillo repeat containing 1
mm39_v1_chr11_+_121150798_121150881	0.880646	UGGCACU	ENSMUST00000106113.2|Foxk2|ENSMUSG00000039275.10|forkhead box K2
mm39_v1_chr15_+_84921283_84921308	0.880118	UGGCACU	ENSMUST00000023069.9|Fam118a|ENSMUSG00000022434.9|family with sequence similarity 118, member A
mm39_v1_chr18_+_3383230_3383271	0.866608	UGGCACU	ENSMUST00000162301.8|Cul2|ENSMUSG00000024231.16|cullin 2	ENSMUST00000161317.2|Cul2|ENSMUSG00000024231.16|cullin 2
mm39_v1_chr5_-_44956981_44957014	0.864933	UGGCACU	ENSMUST00000070748.10|Ldb2|ENSMUSG00000039706.12|LIM domain binding 2
mm39_v1_chr1_-_95595280_95595323	0.8571	UGGCACU	ENSMUST00000043336.11|St8sia4|ENSMUSG00000040710.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm39_v1_chr7_-_81104423_81104512	0.856957	UGGCACU	ENSMUST00000178892.3|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1	ENSMUST00000098331.10|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1
mm39_v1_chr9_-_62444318_62444343	0.85502	UGGCACU	ENSMUST00000048043.12|Coro2b|ENSMUSG00000041729.16|coronin, actin binding protein, 2B
mm39_v1_chr4_+_21776261_21776297	0.846767	UGGCACU	ENSMUST00000065111.15|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000040429.12|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000148304.8|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45
mm39_v1_chr1_+_33758937_33759080	0.82364	UGGCACU	ENSMUST00000088287.10|Rab23|ENSMUSG00000004768.15|RAB23, member RAS oncogene family
mm39_v1_chr4_+_65523223_65523289	0.820234	UGGCACU	ENSMUST00000050850.14|Trim32|ENSMUSG00000051675.14|tripartite motif-containing 32	ENSMUST00000107366.2|Trim32|ENSMUSG00000051675.14|tripartite motif-containing 32
mm39_v1_chr16_-_63684477_63684545	0.807558	UGGCACU	ENSMUST00000232654.2|Epha3|ENSMUSG00000052504.8|Eph receptor A3	ENSMUST00000064405.8|Epha3|ENSMUSG00000052504.8|Eph receptor A3
mm39_v1_chr2_-_130681978_130682070	0.783227	UGGCACU	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr19_-_5323092_5323158	0.771163	UGGCACU	ENSMUST00000237463.2|Pacs1|ENSMUSG00000024855.11|phosphofurin acidic cluster sorting protein 1	ENSMUST00000025786.9|Pacs1|ENSMUSG00000024855.11|phosphofurin acidic cluster sorting protein 1
mm39_v1_chr3_-_108108113_108108175	0.766725	UGGCACU	ENSMUST00000106655.2|Cyb561d1|ENSMUSG00000048796.8|cytochrome b-561 domain containing 1	ENSMUST00000065664.7|Cyb561d1|ENSMUSG00000048796.8|cytochrome b-561 domain containing 1
mm39_v1_chr12_-_65010124_65010159	0.761877	UGGCACU	ENSMUST00000021331.9|Klhl28|ENSMUSG00000020948.10|kelch-like 28
mm39_v1_chr1_-_54596754_54596856	0.738502	UGGCACU	ENSMUST00000097739.5|Pgap1|ENSMUSG00000073678.5|post-GPI attachment to proteins 1
mm39_v1_chr10_+_62816005_62816041	0.707217	UGGCACU	ENSMUST00000131718.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000119567.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000122231.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2
mm39_v1_chr16_-_55755208_55755243	0.695694	UGGCACU	ENSMUST00000121129.8|Cep97|ENSMUSG00000022604.19|centrosomal protein 97	ENSMUST00000023270.14|Cep97|ENSMUSG00000022604.19|centrosomal protein 97
mm39_v1_chrX_+_149829131_149829146	0.689215	UGGCACU	ENSMUST00000112685.8|Fgd1|ENSMUSG00000025265.15|FYVE, RhoGEF and PH domain containing 1
mm39_v1_chr10_-_110845860_110845927	0.681082	UGGCACU	ENSMUST00000041723.15|Zdhhc17|ENSMUSG00000035798.15|zinc finger, DHHC domain containing 17
mm39_v1_chr3_+_107198528_107198596	0.649939	UGGCACU	ENSMUST00000029502.14|Slc16a4|ENSMUSG00000027896.16|solute carrier family 16 (monocarboxylic acid transporters), member 4
mm39_v1_chr18_+_11972277_11972331	0.647185	UGGCACU	ENSMUST00000171109.9|Cables1|ENSMUSG00000040957.16|CDK5 and Abl enzyme substrate 1	ENSMUST00000046948.10|Cables1|ENSMUSG00000040957.16|CDK5 and Abl enzyme substrate 1
mm39_v1_chr6_+_8948608_8948619	0.645326	UGGCACU	ENSMUST00000160300.2|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
mm39_v1_chr3_-_104419128_104419250	0.637296	UGGCACU	ENSMUST00000199070.5|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000046316.11|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2	ENSMUST00000198332.2|Lrig2|ENSMUSG00000032913.14|leucine-rich repeats and immunoglobulin-like domains 2
mm39_v1_chrX_+_132959905_132959988	0.628411	UGGCACU	ENSMUST00000113287.8|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2	ENSMUST00000033609.9|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2	ENSMUST00000113286.8|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2
mm39_v1_chr8_-_25691380_25691465	0.625811	UGGCACU	ENSMUST00000084512.11|Tacc1|ENSMUSG00000065954.12|transforming, acidic coiled-coil containing protein 1
mm39_v1_chr12_+_83678987_83679099	0.610603	UGGCACU	ENSMUST00000048155.16|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182618.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000183154.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182036.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182347.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25
mm39_v1_chr5_+_24305577_24305623	0.571375	UGGCACU	ENSMUST00000030841.10|Klhl7|ENSMUSG00000028986.13|kelch-like 7	ENSMUST00000163409.5|Klhl7|ENSMUSG00000028986.13|kelch-like 7
mm39_v1_chr15_+_54434576_54434596	0.564986	UGGCACU	ENSMUST00000025356.4|Mal2|ENSMUSG00000024479.4|mal, T cell differentiation protein 2
mm39_v1_chr1_-_72576089_72576158	0.563717	UGGCACU	ENSMUST00000047786.6|Marchf4|ENSMUSG00000039372.6|membrane associated ring-CH-type finger 4
mm39_v1_chr6_+_119213468_119213493	0.560978	UGGCACU	ENSMUST00000238905.2|Cacna2d4|ENSMUSG00000041460.17|calcium channel, voltage-dependent, alpha 2/delta subunit 4	ENSMUST00000037434.13|Cacna2d4|ENSMUSG00000041460.17|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm39_v1_chr8_-_107064615_107064640	0.559519	UGGCACU	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr6_+_136495784_136495808	0.555604	UGGCACU	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr1_-_133728779_133728805	0.543987	UGGCACU	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chrX_-_135644424_135644442	0.541442	UGGCACU	ENSMUST00000166478.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2	ENSMUST00000113097.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2
mm39_v1_chr4_+_129355374_129355629	0.534751	UGGCACU	ENSMUST00000048162.10|Bsdc1|ENSMUSG00000040859.15|BSD domain containing 1	ENSMUST00000138013.3|Bsdc1|ENSMUSG00000040859.15|BSD domain containing 1
mm39_v1_chr9_+_56982622_56982727	0.53012	UGGCACU	ENSMUST00000167715.8|Sin3a|ENSMUSG00000042557.15|transcriptional regulator, SIN3A (yeast)
mm39_v1_chr13_+_83652352_83652374	0.523229	UGGCACU	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr7_-_45474174_45474206	0.521746	UGGCACU	ENSMUST00000071937.7|Kcnj14|ENSMUSG00000058743.7|potassium inwardly-rectifying channel, subfamily J, member 14
mm39_v1_chr5_-_3852857_3852925	0.521124	UGGCACU	ENSMUST00000043551.11|Ankib1|ENSMUSG00000040351.12|ankyrin repeat and IBR domain containing 1
mm39_v1_chr1_-_143879877_143879899	0.519233	UGGCACU	ENSMUST00000127206.8|Rgs2|ENSMUSG00000026360.10|regulator of G-protein signaling 2
mm39_v1_chr5_+_67464284_67464318	0.501268	UGGCACU	ENSMUST00000113676.6|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9	ENSMUST00000162372.8|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9
mm39_v1_chr18_+_68066328_68066378	0.491318	UGGCACU	ENSMUST00000063775.5|Ldlrad4|ENSMUSG00000024544.10|low density lipoprotein receptor class A domain containing 4
mm39_v1_chrX_+_102400061_102400094	0.482871	UGGCACU	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr10_+_74896383_74896461	0.4809	UGGCACU	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr3_+_31049896_31050017	0.477771	UGGCACU	ENSMUST00000108249.9|Prkci|ENSMUSG00000037643.15|protein kinase C, iota
mm39_v1_chr13_-_21637830_21637870	0.46363	UGGCACU	ENSMUST00000032820.15|Zscan26|ENSMUSG00000022228.15|zinc finger and SCAN domain containing 26
mm39_v1_chr10_-_76181089_76181205	0.45818	UGGCACU	ENSMUST00000036033.14|Dip2a|ENSMUSG00000020231.16|disco interacting protein 2 homolog A	ENSMUST00000160048.8|Dip2a|ENSMUSG00000020231.16|disco interacting protein 2 homolog A	ENSMUST00000105417.10|Dip2a|ENSMUSG00000020231.16|disco interacting protein 2 homolog A
mm39_v1_chr14_-_31139617_31139634	0.454124	UGGCACU	ENSMUST00000100730.10|Sh3bp5|ENSMUSG00000021892.15|SH3-domain binding protein 5 (BTK-associated)
mm39_v1_chr10_+_20188207_20188238	0.452889	UGGCACU	ENSMUST00000092678.10|Bclaf1|ENSMUSG00000037608.17|BCL2-associated transcription factor 1	ENSMUST00000043881.12|Bclaf1|ENSMUSG00000037608.17|BCL2-associated transcription factor 1
mm39_v1_chr3_-_132655954_132656052	0.452745	UGGCACU	ENSMUST00000042744.16|Npnt|ENSMUSG00000040998.19|nephronectin	ENSMUST00000117811.8|Npnt|ENSMUSG00000040998.19|nephronectin
mm39_v1_chr15_-_53765869_53765926	0.429555	UGGCACU	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr15_-_36283244_36283297	0.423716	UGGCACU	ENSMUST00000228358.2|Rnf19a|ENSMUSG00000022280.10|ring finger protein 19A	ENSMUST00000022890.10|Rnf19a|ENSMUSG00000022280.10|ring finger protein 19A
mm39_v1_chr1_+_87683592_87683839	0.391419	UGGCACU	ENSMUST00000144047.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000027512.13|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113186.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113190.3|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)
mm39_v1_chr6_+_63232955_63233024	0.368256	UGGCACU	ENSMUST00000095852.5|Grid2|ENSMUSG00000071424.11|glutamate receptor, ionotropic, delta 2
mm39_v1_chr4_-_151946219_151946333	0.365475	UGGCACU	ENSMUST00000097774.9|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr16_+_11140740_11140775	0.365178	UGGCACU	ENSMUST00000180792.8|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr1_+_160806194_160806226	0.352495	UGGCACU	ENSMUST00000064725.11|Serpinc1|ENSMUSG00000026715.13|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	ENSMUST00000191936.2|Serpinc1|ENSMUSG00000026715.13|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm39_v1_chr1_-_167070695_167070732	0.3332	UGGCACU	ENSMUST00000027839.14|Uck2|ENSMUSG00000026558.14|uridine-cytidine kinase 2
mm39_v1_chr12_+_65012564_65012714	0.323643	UGGCACU	ENSMUST00000066296.9|Togaram1|ENSMUSG00000035614.12|TOG array regulator of axonemal microtubules 1	ENSMUST00000223166.2|Togaram1|ENSMUSG00000035614.12|TOG array regulator of axonemal microtubules 1
mm39_v1_chr18_-_47501897_47501945	0.322753	UGGCACU	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr11_-_120882131_120882165	0.32014	UGGCACU	ENSMUST00000239115.2|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta	ENSMUST00000018274.10|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta
mm39_v1_chr1_-_175520185_175520467	0.311018	UGGCACU	ENSMUST00000104984.4|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000209720.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000211489.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000027809.8|Opn3|ENSMUSG00000026525.10|opsin 3	ENSMUST00000210367.2|Chml|ENSMUSG00000078185.4|choroideremia-like
mm39_v1_chr4_-_22488296_22488366	0.310519	UGGCACU	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr11_-_70111796_70111890	0.308888	UGGCACU	ENSMUST00000060010.3|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000190533.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr10_-_125164399_125164410	0.305635	UGGCACU	ENSMUST00000063318.10|Slc16a7|ENSMUSG00000020102.16|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm39_v1_chr1_-_135358228_135358244	0.303469	UGGCACU	ENSMUST00000041023.14|Ipo9|ENSMUSG00000041879.14|importin 9
mm39_v1_chr2_-_91540864_91540927	0.303308	UGGCACU	ENSMUST00000028678.9|Atg13|ENSMUSG00000027244.15|autophagy related 13	ENSMUST00000076803.12|Atg13|ENSMUSG00000027244.15|autophagy related 13
mm39_v1_chr5_+_124939739_124939836	0.302262	UGGCACU	ENSMUST00000111417.9|Zfp664|ENSMUSG00000079215.9|zinc finger protein 664
mm39_v1_chr15_+_12205095_12205124	0.290291	UGGCACU	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr3_-_104127676_104127695	0.288467	UGGCACU	ENSMUST00000064371.14|Magi3|ENSMUSG00000052539.16|membrane associated guanylate kinase, WW and PDZ domain containing 3
mm39_v1_chr8_-_112718888_112718934	0.287026	UGGCACU	ENSMUST00000034427.12|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1	ENSMUST00000139820.8|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1
mm39_v1_chr4_+_148533062_148533094	0.273912	UGGCACU	ENSMUST00000103221.10|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase	ENSMUST00000057580.8|Mtor|ENSMUSG00000028991.16|mechanistic target of rapamycin kinase
mm39_v1_chrX_-_165992311_165992475	0.248511	UGGCACU	ENSMUST00000112172.4|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr6_-_90787100_90787142	0.24829	UGGCACU	ENSMUST00000101151.10|Iqsec1|ENSMUSG00000034312.16|IQ motif and Sec7 domain 1
mm39_v1_chr6_-_13677928_13677974	0.245537	UGGCACU	ENSMUST00000203078.2|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2	ENSMUST00000045235.8|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2
mm39_v1_chr2_+_37342248_37342297	0.240595	UGGCACU	ENSMUST00000148470.8|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1	ENSMUST00000066055.10|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1	ENSMUST00000112920.2|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1
mm39_v1_chr10_-_59787646_59787663	0.236441	UGGCACU	ENSMUST00000020308.5|Ddit4|ENSMUSG00000020108.5|DNA-damage-inducible transcript 4
mm39_v1_chr3_+_32490300_32490300	0.22126	UGGCACU	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr11_-_8614497_8614594	0.220764	UGGCACU	ENSMUST00000020695.13|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr11_-_74615496_74615530	0.218775	UGGCACU	ENSMUST00000021091.15|Pafah1b1|ENSMUSG00000020745.16|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm39_v1_chr15_+_66449385_66449487	0.21702	UGGCACU	ENSMUST00000230882.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000048188.10|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000230948.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000229160.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1
mm39_v1_chr7_-_99629637_99629683	0.216083	UGGCACU	ENSMUST00000080817.6|Rnf169|ENSMUSG00000058761.6|ring finger protein 169
mm39_v1_chr2_-_152256947_152256947	0.209169	UGGCACU	ENSMUST00000099207.5|Zcchc3|ENSMUSG00000074682.5|zinc finger, CCHC domain containing 3
mm39_v1_chr12_+_83997382_83997477	0.203868	UGGCACU	ENSMUST00000053744.9|Riox1|ENSMUSG00000046791.9|ribosomal oxygenase 1
mm39_v1_chr4_-_129534853_129534873	0.203133	UGGCACU	ENSMUST00000046425.16|Txlna|ENSMUSG00000053841.16|taxilin alpha	ENSMUST00000133803.8|Txlna|ENSMUSG00000053841.16|taxilin alpha
mm39_v1_chr10_+_12966532_12966587	0.199172	UGGCACU	ENSMUST00000121646.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121325.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1	ENSMUST00000121766.8|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr19_-_47525437_47525558	0.195459	UGGCACU	ENSMUST00000182808.8|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000182714.2|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit	ENSMUST00000049369.16|Stn1|ENSMUSG00000042694.18|STN1, CST complex subunit
mm39_v1_chr11_+_32592707_32592875	0.191942	UGGCACU	ENSMUST00000109366.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000093205.13|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000076383.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11
mm39_v1_chr1_-_132953068_132953154	0.191643	UGGCACU	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr9_-_89996712_89996779	0.187572	UGGCACU	ENSMUST00000191353.2|Morf4l1|ENSMUSG00000062270.15|mortality factor 4 like 1	ENSMUST00000085248.12|Morf4l1|ENSMUSG00000062270.15|mortality factor 4 like 1
mm39_v1_chr17_+_29768757_29768773	0.183682	UGGCACU	ENSMUST00000048677.9|Tbc1d22b|ENSMUSG00000042203.9|TBC1 domain family, member 22B	ENSMUST00000150388.3|Gm28052|ENSMUSG00000099329.3|predicted gene, 28052
mm39_v1_chr11_-_104441218_104441347	0.181063	UGGCACU	ENSMUST00000106962.9|Cdc27|ENSMUSG00000020687.14|cell division cycle 27	ENSMUST00000106961.2|Cdc27|ENSMUSG00000020687.14|cell division cycle 27	ENSMUST00000093923.9|Cdc27|ENSMUSG00000020687.14|cell division cycle 27
mm39_v1_chr11_+_3845221_3845308	0.180035	UGGCACU	ENSMUST00000109996.8|Dusp18|ENSMUSG00000047205.13|dual specificity phosphatase 18	ENSMUST00000055931.5|Dusp18|ENSMUSG00000047205.13|dual specificity phosphatase 18
mm39_v1_chr13_-_23553327_23553387	0.174111	UGGCACU	ENSMUST00000125328.2|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A	ENSMUST00000145451.8|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A	ENSMUST00000050101.9|Zfp322a|ENSMUSG00000046351.12|zinc finger protein 322A
mm39_v1_chr6_+_108760025_108760096	0.168424	UGGCACU	ENSMUST00000032196.9|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr1_-_96799832_96799905	0.138864	UGGCACU	ENSMUST00000071985.6|Slco4c1|ENSMUSG00000040693.8|solute carrier organic anion transporter family, member 4C1
mm39_v1_chr6_-_145195903_145195988	0.138804	UGGCACU	ENSMUST00000111710.8|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000155145.2|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000032399.12|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000203147.3|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog
mm39_v1_chr9_+_56902172_56902207	0.134824	UGGCACU	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr3_+_89084770_89084850	0.13002	UGGCACU	ENSMUST00000029684.15|Scamp3|ENSMUSG00000028049.16|secretory carrier membrane protein 3	ENSMUST00000120697.8|Scamp3|ENSMUSG00000028049.16|secretory carrier membrane protein 3	ENSMUST00000098941.5|Scamp3|ENSMUSG00000028049.16|secretory carrier membrane protein 3
mm39_v1_chr1_-_128345089_128345121	0.126131	UGGCACU	ENSMUST00000027602.15|Dars|ENSMUSG00000026356.16|aspartyl-tRNA synthetase	ENSMUST00000064309.9|Dars|ENSMUSG00000026356.16|aspartyl-tRNA synthetase
mm39_v1_chrX_-_146337046_146337082	0.11282	UGGCACU	ENSMUST00000112819.9|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2	ENSMUST00000136789.8|Lrch2|ENSMUSG00000031290.15|leucine-rich repeats and calponin homology (CH) domain containing 2
mm39_v1_chr9_+_72952115_72952146	0.112118	UGGCACU	ENSMUST00000184146.8|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family	ENSMUST00000034722.5|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family
mm39_v1_chrX_+_41156713_41156751	0.108542	UGGCACU	ENSMUST00000115094.8|Xiap|ENSMUSG00000025860.16|X-linked inhibitor of apoptosis
mm39_v1_chr18_+_22478146_22478146	0.0981251	UGGCACU	ENSMUST00000120223.8|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3	ENSMUST00000097655.4|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3
mm39_v1_chr2_+_138098454_138098499	0.0901396	UGGCACU	ENSMUST00000091556.12|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr12_-_46865709_46865720	0.0777561	UGGCACU	ENSMUST00000021438.8|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr5_+_115769960_115769992	0.0770917	UGGCACU	ENSMUST00000031492.15|Rab35|ENSMUSG00000029518.16|RAB35, member RAS oncogene family
mm39_v1_chr5_-_135280063_135280134	0.0769306	UGGCACU	ENSMUST00000062572.3|Fzd9|ENSMUSG00000049551.3|frizzled class receptor 9
mm39_v1_chr12_-_8550003_8550017	0.076537	UGGCACU	ENSMUST00000067384.6|Rhob|ENSMUSG00000054364.6|ras homolog family member B
mm39_v1_chr12_-_91815855_91815931	0.0732406	UGGCACU	ENSMUST00000167466.2|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000021347.12|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000178462.8|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)
mm39_v1_chr2_-_84508385_84508462	0.063315	UGGCACU	ENSMUST00000189772.2|Gm28635|ENSMUSG00000101645.2|predicted gene 28635	ENSMUST00000053664.9|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2	ENSMUST00000111664.8|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2
mm39_v1_chr2_+_3119442_3119513	0.0471287	UGGCACU	ENSMUST00000091505.11|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr14_-_55897854_55897965	0.0459186	UGGCACU	ENSMUST00000002400.7|Mdp1|ENSMUSG00000002329.8|magnesium-dependent phosphatase 1
mm39_v1_chr2_+_151336197_151336224	0.0411821	UGGCACU	ENSMUST00000028949.16|Nsfl1c|ENSMUSG00000027455.17|NSFL1 (p97) cofactor (p47)	ENSMUST00000103160.5|Nsfl1c|ENSMUSG00000027455.17|NSFL1 (p97) cofactor (p47)
mm39_v1_chr4_-_136563154_136563299	0.0402925	UGGCACU	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr4_+_119396849_119396912	0.0357119	UGGCACU	ENSMUST00000044564.15|Foxj3|ENSMUSG00000032998.17|forkhead box J3	ENSMUST00000162267.8|Foxj3|ENSMUSG00000032998.17|forkhead box J3	ENSMUST00000106310.9|Foxj3|ENSMUSG00000032998.17|forkhead box J3	ENSMUST00000138845.9|Foxj3|ENSMUSG00000032998.17|forkhead box J3
mm39_v1_chr4_-_53159885_53159900	0.0345676	UGGCACU	ENSMUST00000030010.4|Abca1|ENSMUSG00000015243.5|ATP-binding cassette, sub-family A (ABC1), member 1
mm39_v1_chr11_-_50321927_50321960	0.0282423	UGGCACU	ENSMUST00000020643.4|Rufy1|ENSMUSG00000020375.10|RUN and FYVE domain containing 1
mm39_v1_chr3_+_28317354_28317364	0.0268435	UGGCACU	ENSMUST00000159236.9|Tnik|ENSMUSG00000027692.17|TRAF2 and NCK interacting kinase
mm39_v1_chr8_+_117884711_117884876	0.0225432	UGGCACU	ENSMUST00000064488.11|Gan|ENSMUSG00000052557.12|giant axonal neuropathy	ENSMUST00000162997.3|Gan|ENSMUSG00000052557.12|giant axonal neuropathy
mm39_v1_chr1_+_36550948_36550987	0.0204565	UGGCACU	ENSMUST00000001166.14|Cnnm3|ENSMUSG00000001138.14|cyclin M3	ENSMUST00000097776.4|Cnnm3|ENSMUSG00000001138.14|cyclin M3
mm39_v1_chr7_+_35285657_35285715	0.00518518	UGGCACU	ENSMUST00000040844.16|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000188906.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000186245.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)	ENSMUST00000190503.7|Ankrd27|ENSMUSG00000034867.17|ankyrin repeat domain 27 (VPS9 domain)
mm39_v1_chr15_-_97729341_97729393	0.00432255	UGGCACU	ENSMUST00000079838.14|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000118294.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
