mm39_v1_chr9_+_62765362_62765420	7.76627	UGGUCCC	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr1_+_172327569_172327614	5.15372	UGGUCCC	ENSMUST00000111230.8|Tagln2|ENSMUSG00000026547.16|transgelin 2
mm39_v1_chr8_-_27664651_27664680	4.94865	UGGUCCC	ENSMUST00000054212.7|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000033878.14|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000209377.2|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)
mm39_v1_chr13_-_29137673_29137696	3.9226	UGGUCCC	ENSMUST00000067230.6|Sox4|ENSMUSG00000076431.5|SRY (sex determining region Y)-box 4
mm39_v1_chr3_-_89245297_89245374	3.89565	UGGUCCC	ENSMUST00000029674.8|Efna4|ENSMUSG00000028040.8|ephrin A4
mm39_v1_chr5_+_32293145_32293201	3.88072	UGGUCCC	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr2_+_119068012_119068035	3.83337	UGGUCCC	ENSMUST00000110817.3|Spint1|ENSMUSG00000027315.14|serine protease inhibitor, Kunitz type 1
mm39_v1_chr6_+_108805594_108805682	3.76069	UGGUCCC	ENSMUST00000089162.5|Edem1|ENSMUSG00000030104.10|ER degradation enhancer, mannosidase alpha-like 1
mm39_v1_chr9_+_108867633_108867714	3.65765	UGGUCCC	ENSMUST00000112059.10|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000026737.12|Shisa5|ENSMUSG00000025647.17|shisa family member 5
mm39_v1_chr7_-_28661751_28661765	3.60037	UGGUCCC	ENSMUST00000068045.14|Actn4|ENSMUSG00000054808.16|actinin alpha 4	ENSMUST00000217157.2|Actn4|ENSMUSG00000054808.16|actinin alpha 4
mm39_v1_chr11_+_97690391_97690423	3.57852	UGGUCCC	ENSMUST00000043843.12|Lasp1|ENSMUSG00000038366.16|LIM and SH3 protein 1
mm39_v1_chr15_-_77726333_77726375	3.49011	UGGUCCC	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr1_-_52539395_52539459	3.10799	UGGUCCC	ENSMUST00000186764.7|Nab1|ENSMUSG00000002881.15|Ngfi-A binding protein 1
mm39_v1_chr4_-_114844417_114844453	3.01234	UGGUCCC	ENSMUST00000030491.9|Cmpk1|ENSMUSG00000028719.9|cytidine monophosphate (UMP-CMP) kinase 1
mm39_v1_chr3_-_89294430_89294496	3.00626	UGGUCCC	ENSMUST00000107433.8|Zbtb7b|ENSMUSG00000028042.16|zinc finger and BTB domain containing 7B
mm39_v1_chr15_-_100627209_100627273	2.99264	UGGUCCC	ENSMUST00000159715.8|Galnt6|ENSMUSG00000037280.13|polypeptide N-acetylgalactosaminyltransferase 6	ENSMUST00000052069.12|Galnt6|ENSMUSG00000037280.13|polypeptide N-acetylgalactosaminyltransferase 6
mm39_v1_chr3_-_115800989_115801060	2.94672	UGGUCCC	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr17_+_47747657_47747730	2.93304	UGGUCCC	ENSMUST00000150819.3|AI661453|ENSMUSG00000034382.15|expressed sequence AI661453
mm39_v1_chr19_-_6957789_6957869	2.8995	UGGUCCC	ENSMUST00000070878.9|Fkbp2|ENSMUSG00000056629.17|FK506 binding protein 2	ENSMUST00000177752.9|Fkbp2|ENSMUSG00000056629.17|FK506 binding protein 2
mm39_v1_chr10_+_79690452_79690476	2.89587	UGGUCCC	ENSMUST00000165704.8|Ptbp1|ENSMUSG00000006498.17|polypyrimidine tract binding protein 1
mm39_v1_chr16_-_10131804_10131832	2.88453	UGGUCCC	ENSMUST00000078357.5|Emp2|ENSMUSG00000022505.10|epithelial membrane protein 2
mm39_v1_chr11_-_69260203_69260242	2.87242	UGGUCCC	ENSMUST00000092971.13|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3	ENSMUST00000108661.8|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3
mm39_v1_chr19_-_10217968_10218125	2.82756	UGGUCCC	ENSMUST00000189897.2|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000186056.7|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000088013.12|Myrf|ENSMUSG00000036098.16|myelin regulatory factor
mm39_v1_chr10_+_27950809_27950870	2.80833	UGGUCCC	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr7_-_19556612_19556712	2.77394	UGGUCCC	ENSMUST00000120537.8|Bcl3|ENSMUSG00000053175.18|B cell leukemia/lymphoma 3
mm39_v1_chr4_-_59549314_59549364	2.6338	UGGUCCC	ENSMUST00000148331.9|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3	ENSMUST00000030076.12|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3
mm39_v1_chrX_+_95139639_95139662	2.62083	UGGUCCC	ENSMUST00000117399.2|Msn|ENSMUSG00000031207.17|moesin
mm39_v1_chr2_-_84481058_84481093	2.57988	UGGUCCC	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr3_+_131270529_131270551	2.55831	UGGUCCC	ENSMUST00000029666.14|Papss1|ENSMUSG00000028032.14|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm39_v1_chr4_-_116024788_116024804	2.47517	UGGUCCC	ENSMUST00000030465.10|Tspan1|ENSMUSG00000028699.10|tetraspanin 1	ENSMUST00000143426.2|Tspan1|ENSMUSG00000028699.10|tetraspanin 1
mm39_v1_chr7_+_79836581_79836651	2.46945	UGGUCCC	ENSMUST00000032754.9|Sema4b|ENSMUSG00000030539.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm39_v1_chr17_-_34000804_34000804	2.44523	UGGUCCC	ENSMUST00000002360.17|Angptl4|ENSMUSG00000002289.17|angiopoietin-like 4
mm39_v1_chr17_+_24570991_24571002	2.40711	UGGUCCC	ENSMUST00000039013.15|Abca3|ENSMUSG00000024130.17|ATP-binding cassette, sub-family A (ABC1), member 3
mm39_v1_chr4_+_44004437_44004455	2.38919	UGGUCCC	ENSMUST00000107846.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)
mm39_v1_chr11_+_76092833_76092858	2.38875	UGGUCCC	ENSMUST00000094014.10|Tlcd3a|ENSMUSG00000069808.14|TLC domain containing 3A
mm39_v1_chr17_-_48235560_48235577	2.38795	UGGUCCC	ENSMUST00000113265.8|Foxp4|ENSMUSG00000023991.17|forkhead box P4
mm39_v1_chr5_-_115487005_115487040	2.38041	UGGUCCC	ENSMUST00000040154.9|Cox6a1|ENSMUSG00000041697.9|cytochrome c oxidase subunit 6A1
mm39_v1_chr8_-_105122397_105122490	2.28074	UGGUCCC	ENSMUST00000179802.2|Cmtm4|ENSMUSG00000096188.2|CKLF-like MARVEL transmembrane domain containing 4
mm39_v1_chr12_-_56581823_56581891	2.27399	UGGUCCC	ENSMUST00000178477.9|Nkx2-1|ENSMUSG00000001496.16|NK2 homeobox 1
mm39_v1_chr15_-_35155896_35155959	2.25465	UGGUCCC	ENSMUST00000067033.8|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3	ENSMUST00000018476.14|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3
mm39_v1_chr3_-_144275897_144275989	2.22301	UGGUCCC	ENSMUST00000043325.9|Hs2st1|ENSMUSG00000040151.10|heparan sulfate 2-O-sulfotransferase 1
mm39_v1_chr14_-_47426863_47426877	2.21961	UGGUCCC	ENSMUST00000089959.7|Gch1|ENSMUSG00000037580.11|GTP cyclohydrolase 1
mm39_v1_chr4_-_35157405_35157504	2.21839	UGGUCCC	ENSMUST00000102975.10|Mob3b|ENSMUSG00000073910.11|MOB kinase activator 3B
mm39_v1_chr2_-_125624754_125624790	2.19346	UGGUCCC	ENSMUST00000053699.13|Secisbp2l|ENSMUSG00000035093.17|SECIS binding protein 2-like
mm39_v1_chr11_+_73067909_73068060	2.19163	UGGUCCC	ENSMUST00000040687.12|Tax1bp3|ENSMUSG00000040158.13|Tax1 (human T cell leukemia virus type I) binding protein 3
mm39_v1_chr11_+_21189277_21189308	2.13128	UGGUCCC	ENSMUST00000109578.8|Vps54|ENSMUSG00000020128.16|VPS54 GARP complex subunit	ENSMUST00000006221.14|Vps54|ENSMUSG00000020128.16|VPS54 GARP complex subunit
mm39_v1_chr15_-_34495329_34495401	2.11084	UGGUCCC	ENSMUST00000022946.6|Rida|ENSMUSG00000022323.12|reactive intermediate imine deaminase A homolog
mm39_v1_chr3_-_131138541_131138589	2.09862	UGGUCCC	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr1_-_13660027_13660134	2.07364	UGGUCCC	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr16_+_49675969_49676120	2.02943	UGGUCCC	ENSMUST00000229101.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230836.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000229206.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000084838.14|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230281.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm39_v1_chr16_+_87495792_87495872	2.02737	UGGUCCC	ENSMUST00000026703.6|Bach1|ENSMUSG00000025612.6|BTB and CNC homology 1, basic leucine zipper transcription factor 1
mm39_v1_chr9_+_114560235_114560308	2.01701	UGGUCCC	ENSMUST00000035007.10|Cmtm6|ENSMUSG00000032434.10|CKLF-like MARVEL transmembrane domain containing 6
mm39_v1_chr16_-_10994135_10994257	2.00215	UGGUCCC	ENSMUST00000037633.16|Zc3h7a|ENSMUSG00000037965.16|zinc finger CCCH type containing 7 A
mm39_v1_chr11_-_69563133_69563186	1.97764	UGGUCCC	ENSMUST00000163666.3|Eif4a1|ENSMUSG00000059796.17|eukaryotic translation initiation factor 4A1
mm39_v1_chrX_-_20928219_20928302	1.97182	UGGUCCC	ENSMUST00000040628.6|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182	ENSMUST00000115333.9|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182	ENSMUST00000115334.8|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182
mm39_v1_chr4_-_116991150_116991167	1.94951	UGGUCCC	ENSMUST00000076859.12|Plk3|ENSMUSG00000028680.15|polo like kinase 3
mm39_v1_chr6_-_39702381_39702413	1.91487	UGGUCCC	ENSMUST00000002487.15|Braf|ENSMUSG00000002413.16|Braf transforming gene
mm39_v1_chr19_-_24202344_24202438	1.90895	UGGUCCC	ENSMUST00000099558.5|Tjp2|ENSMUSG00000024812.12|tight junction protein 2	ENSMUST00000232956.2|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr11_-_50183129_50183191	1.83351	UGGUCCC	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr11_-_120472379_120472452	1.83216	UGGUCCC	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr4_+_11485945_11485975	1.79977	UGGUCCC	ENSMUST00000055372.14|Virma|ENSMUSG00000040720.16|vir like m6A methyltransferase associated	ENSMUST00000059914.13|Virma|ENSMUSG00000040720.16|vir like m6A methyltransferase associated
mm39_v1_chr6_-_59001455_59001534	1.79424	UGGUCCC	ENSMUST00000089860.12|Fam13a|ENSMUSG00000037709.14|family with sequence similarity 13, member A
mm39_v1_chr19_-_4489415_4489478	1.76452	UGGUCCC	ENSMUST00000235680.2|Rhod|ENSMUSG00000041845.12|ras homolog family member D	ENSMUST00000117462.2|Rhod|ENSMUSG00000041845.12|ras homolog family member D	ENSMUST00000048197.10|Rhod|ENSMUSG00000041845.12|ras homolog family member D
mm39_v1_chr1_-_64160557_64160650	1.76084	UGGUCCC	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr4_-_126362372_126362446	1.74844	UGGUCCC	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr7_-_116042674_116042698	1.746	UGGUCCC	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr7_-_80052491_80052510	1.72553	UGGUCCC	ENSMUST00000122232.8|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr14_-_55019387_55019411	1.71291	UGGUCCC	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr16_+_17615146_17615189	1.69547	UGGUCCC	ENSMUST00000012161.5|Scarf2|ENSMUSG00000012017.5|scavenger receptor class F, member 2	ENSMUST00000232577.2|Scarf2|ENSMUSG00000012017.5|scavenger receptor class F, member 2
mm39_v1_chr2_+_90507552_90507580	1.65114	UGGUCCC	ENSMUST00000057481.7|Nup160|ENSMUSG00000051329.14|nucleoporin 160
mm39_v1_chr17_-_13179589_13179634	1.63716	UGGUCCC	ENSMUST00000233792.2|Acat2|ENSMUSG00000023832.15|acetyl-Coenzyme A acetyltransferase 2	ENSMUST00000007005.14|Acat2|ENSMUSG00000023832.15|acetyl-Coenzyme A acetyltransferase 2
mm39_v1_chr3_-_95125002_95125038	1.62976	UGGUCCC	ENSMUST00000107209.8|Gabpb2|ENSMUSG00000038766.17|GA repeat binding protein, beta 2
mm39_v1_chrX_+_13147209_13147270	1.59407	UGGUCCC	ENSMUST00000000804.7|Ddx3x|ENSMUSG00000000787.13|DEAD box helicase 3, X-linked
mm39_v1_chr11_+_75084609_75084691	1.58843	UGGUCCC	ENSMUST00000102514.4|Rtn4rl1|ENSMUSG00000045287.7|reticulon 4 receptor-like 1
mm39_v1_chr16_-_13977084_13977152	1.58028	UGGUCCC	ENSMUST00000090300.6|Marf1|ENSMUSG00000060657.9|meiosis regulator and mRNA stability 1
mm39_v1_chr6_+_86172196_86172224	1.5731	UGGUCCC	ENSMUST00000032066.13|Tgfa|ENSMUSG00000029999.15|transforming growth factor alpha
mm39_v1_chr6_+_146992877_146993036	1.55608	UGGUCCC	ENSMUST00000036003.8|Klhl42|ENSMUSG00000040102.11|kelch-like 42
mm39_v1_chr1_-_54965470_54965561	1.55441	UGGUCCC	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr13_+_89687915_89687915	1.54922	UGGUCCC	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr9_+_123358810_123358824	1.54911	UGGUCCC	ENSMUST00000026270.9|Sacm1l|ENSMUSG00000025240.11|SAC1 suppressor of actin mutations 1-like (yeast)	ENSMUST00000239083.2|Sacm1l|ENSMUSG00000025240.11|SAC1 suppressor of actin mutations 1-like (yeast)
mm39_v1_chr13_-_98628509_98628509	1.54113	UGGUCCC	ENSMUST00000170205.2|Gm10320|ENSMUSG00000092116.2|predicted pseudogene 10320
mm39_v1_chr11_+_120382666_120382716	1.53686	UGGUCCC	ENSMUST00000026899.4|Slc25a10|ENSMUSG00000025792.10|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm39_v1_chr11_+_68979332_68979380	1.51535	UGGUCCC	ENSMUST00000117780.2|Vamp2|ENSMUSG00000020894.17|vesicle-associated membrane protein 2
mm39_v1_chr19_-_4675631_4675686	1.4971	UGGUCCC	ENSMUST00000225375.2|Rce1|ENSMUSG00000024889.6|Ras converting CAAX endopeptidase 1	ENSMUST00000025823.6|Rce1|ENSMUSG00000024889.6|Ras converting CAAX endopeptidase 1
mm39_v1_chr4_+_128777339_128777403	1.48476	UGGUCCC	ENSMUST00000035667.9|Trim62|ENSMUSG00000041000.9|tripartite motif-containing 62
mm39_v1_chrX_-_133442596_133442649	1.48063	UGGUCCC	ENSMUST00000054213.5|Timm8a1|ENSMUSG00000048007.5|translocase of inner mitochondrial membrane 8A1
mm39_v1_chr11_+_96209093_96209093	1.42255	UGGUCCC	ENSMUST00000049241.9|Hoxb4|ENSMUSG00000038692.9|homeobox B4
mm39_v1_chr19_+_4198615_4198664	1.4064	UGGUCCC	ENSMUST00000123874.8|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000008893.9|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000237125.2|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B
mm39_v1_chr11_+_70453806_70453896	1.40278	UGGUCCC	ENSMUST00000079244.12|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000102558.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr9_-_36678868_36678975	1.39485	UGGUCCC	ENSMUST00000217599.2|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	ENSMUST00000120381.9|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm39_v1_chr12_-_101049884_101049977	1.39372	UGGUCCC	ENSMUST00000048305.10|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A	ENSMUST00000163095.9|Ppp4r3a|ENSMUSG00000041846.16|protein phosphatase 4 regulatory subunit 3A
mm39_v1_chr4_-_126096551_126096554	1.37602	UGGUCCC	ENSMUST00000080919.12|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3
mm39_v1_chr4_-_87951565_87951610	1.37277	UGGUCCC	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr16_-_32306683_32306713	1.36838	UGGUCCC	ENSMUST00000042042.9|Slc51a|ENSMUSG00000035699.9|solute carrier family 51, alpha subunit
mm39_v1_chr10_+_21870565_21870591	1.36446	UGGUCCC	ENSMUST00000020145.12|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr4_+_106418224_106418235	1.35121	UGGUCCC	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr11_+_51989508_51989640	1.33155	UGGUCCC	ENSMUST00000020608.3|Ppp2ca|ENSMUSG00000020349.5|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm39_v1_chr2_-_153083322_153083346	1.32251	UGGUCCC	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr11_-_98040377_98040446	1.31993	UGGUCCC	ENSMUST00000103143.10|Fbxl20|ENSMUSG00000020883.19|F-box and leucine-rich repeat protein 20
mm39_v1_chr1_+_159871943_159872024	1.31495	UGGUCCC	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chrX_-_50106844_50106910	1.31246	UGGUCCC	ENSMUST00000053593.8|Rap2c|ENSMUSG00000050029.8|RAP2C, member of RAS oncogene family
mm39_v1_chr16_+_32151056_32151086	1.29618	UGGUCCC	ENSMUST00000115151.5|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7	ENSMUST00000232137.2|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7
mm39_v1_chr1_+_59952131_59952186	1.27769	UGGUCCC	ENSMUST00000036540.12|Fam117b|ENSMUSG00000041040.13|family with sequence similarity 117, member B
mm39_v1_chr2_-_152673585_152673648	1.27427	UGGUCCC	ENSMUST00000156688.2|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1	ENSMUST00000007803.12|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1
mm39_v1_chr11_-_101357046_101357065	1.26434	UGGUCCC	ENSMUST00000040430.8|Vat1|ENSMUSG00000034993.8|vesicle amine transport 1
mm39_v1_chr7_+_101619019_101619047	1.26379	UGGUCCC	ENSMUST00000084852.13|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr18_+_53995156_53995215	1.25474	UGGUCCC	ENSMUST00000069597.8|Csnk1g3|ENSMUSG00000073563.4|casein kinase 1, gamma 3
mm39_v1_chr13_-_113755082_113755101	1.25384	UGGUCCC	ENSMUST00000109241.5|Snx18|ENSMUSG00000042364.12|sorting nexin 18
mm39_v1_chr11_-_100418717_100418826	1.25323	UGGUCCC	ENSMUST00000107389.8|Acly|ENSMUSG00000020917.18|ATP citrate lyase	ENSMUST00000007131.16|Acly|ENSMUSG00000020917.18|ATP citrate lyase
mm39_v1_chr14_-_52434863_52434923	1.23707	UGGUCCC	ENSMUST00000046709.9|Supt16|ENSMUSG00000035726.9|SPT16, facilitates chromatin remodeling subunit
mm39_v1_chr18_-_15196612_15196675	1.23325	UGGUCCC	ENSMUST00000168989.9|Kctd1|ENSMUSG00000036225.16|potassium channel tetramerisation domain containing 1
mm39_v1_chr9_-_85209162_85209183	1.22906	UGGUCCC	ENSMUST00000034802.15|Tent5a|ENSMUSG00000032265.15|terminal nucleotidyltransferase 5A
mm39_v1_chr12_-_75782502_75782511	1.22244	UGGUCCC	ENSMUST00000021450.6|Sgpp1|ENSMUSG00000021054.7|sphingosine-1-phosphate phosphatase 1
mm39_v1_chr5_+_3978266_3978300	1.2224	UGGUCCC	ENSMUST00000044492.10|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr19_+_8875459_8875489	1.21396	UGGUCCC	ENSMUST00000096246.5|Ganab|ENSMUSG00000071650.7|alpha glucosidase 2 alpha neutral subunit	ENSMUST00000235274.2|Ganab|ENSMUSG00000071650.7|alpha glucosidase 2 alpha neutral subunit
mm39_v1_chr9_-_110572721_110572754	1.19734	UGGUCCC	ENSMUST00000166716.8|Pth1r|ENSMUSG00000032492.15|parathyroid hormone 1 receptor
mm39_v1_chr13_+_3588063_3588150	1.18102	UGGUCCC	ENSMUST00000223396.2|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2	ENSMUST00000059515.8|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2	ENSMUST00000222365.2|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2
mm39_v1_chr1_+_135252508_135252558	1.15313	UGGUCCC	ENSMUST00000059352.3|Lmod1|ENSMUSG00000048096.8|leiomodin 1 (smooth muscle)
mm39_v1_chr14_+_70768257_70768287	1.15217	UGGUCCC	ENSMUST00000047331.8|Lgi3|ENSMUSG00000033595.8|leucine-rich repeat LGI family, member 3
mm39_v1_chr18_+_65933586_65933669	1.08047	UGGUCCC	ENSMUST00000025394.14|Sec11c|ENSMUSG00000024516.14|SEC11 homolog C, signal peptidase complex subunit	ENSMUST00000236847.2|Sec11c|ENSMUSG00000024516.14|SEC11 homolog C, signal peptidase complex subunit	ENSMUST00000153193.3|Sec11c|ENSMUSG00000024516.14|SEC11 homolog C, signal peptidase complex subunit
mm39_v1_chr5_-_21260878_21260960	1.05315	UGGUCCC	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr3_+_96079642_96079653	0.997277	UGGUCCC	ENSMUST00000076372.5|Sf3b4|ENSMUSG00000068856.4|splicing factor 3b, subunit 4
mm39_v1_chr14_-_24295988_24295988	0.994173	UGGUCCC	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr12_+_12312135_12312158	0.98994	UGGUCCC	ENSMUST00000069066.14|Cyria|ENSMUSG00000020589.18|CYFIP related Rac1 interactor A
mm39_v1_chr13_-_103911092_103911139	0.936056	UGGUCCC	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr17_-_66384017_66384086	0.924015	UGGUCCC	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr10_+_58282735_58282750	0.92254	UGGUCCC	ENSMUST00000003310.7|Ranbp2|ENSMUSG00000003226.8|RAN binding protein 2
mm39_v1_chr11_-_20691440_20691545	0.921543	UGGUCCC	ENSMUST00000177543.8|Aftph|ENSMUSG00000049659.16|aftiphilin
mm39_v1_chr17_+_75742881_75742926	0.920839	UGGUCCC	ENSMUST00000164192.9|Rasgrp3|ENSMUSG00000071042.13|RAS, guanyl releasing protein 3
mm39_v1_chr1_+_19173246_19173267	0.915403	UGGUCCC	ENSMUST00000037294.8|Tfap2d|ENSMUSG00000042596.8|transcription factor AP-2, delta
mm39_v1_chr19_+_29078765_29078776	0.901004	UGGUCCC	ENSMUST00000064393.6|Rcl1|ENSMUSG00000024785.8|RNA terminal phosphate cyclase-like 1	ENSMUST00000235900.2|Rcl1|ENSMUSG00000024785.8|RNA terminal phosphate cyclase-like 1
mm39_v1_chr1_-_21149392_21149467	0.900642	UGGUCCC	ENSMUST00000037998.6|Tram2|ENSMUSG00000041779.6|translocating chain-associating membrane protein 2
mm39_v1_chr1_-_55066629_55066645	0.88397	UGGUCCC	ENSMUST00000027127.14|Sf3b1|ENSMUSG00000025982.14|splicing factor 3b, subunit 1
mm39_v1_chr5_-_140634773_140634807	0.871438	UGGUCCC	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr9_+_107879700_107879879	0.8448	UGGUCCC	ENSMUST00000035214.11|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000176854.7|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1	ENSMUST00000175874.2|Ip6k1|ENSMUSG00000032594.12|inositol hexaphosphate kinase 1
mm39_v1_chr9_-_14663689_14663689	0.834281	UGGUCCC	ENSMUST00000061498.7|Fut4|ENSMUSG00000049307.7|fucosyltransferase 4
mm39_v1_chr5_+_147367237_147367355	0.795615	UGGUCCC	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr5_+_32768515_32768589	0.793365	UGGUCCC	ENSMUST00000202543.4|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase	ENSMUST00000072311.13|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase
mm39_v1_chr15_-_66841465_66841496	0.791715	UGGUCCC	ENSMUST00000170903.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000166420.8|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000005256.14|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1	ENSMUST00000164070.2|Ndrg1|ENSMUSG00000005125.14|N-myc downstream regulated gene 1
mm39_v1_chr11_+_54413673_54413687	0.789873	UGGUCCC	ENSMUST00000102743.10|Rapgef6|ENSMUSG00000037533.21|Rap guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr11_+_28803188_28803259	0.781538	UGGUCCC	ENSMUST00000020759.12|Efemp1|ENSMUSG00000020467.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm39_v1_chr3_+_88523440_88523458	0.775858	UGGUCCC	ENSMUST00000177498.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2	ENSMUST00000176500.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chr15_+_7840327_7840327	0.775273	UGGUCCC	ENSMUST00000022744.5|Gdnf|ENSMUSG00000022144.5|glial cell line derived neurotrophic factor
mm39_v1_chr2_-_115896279_115896334	0.771807	UGGUCCC	ENSMUST00000110907.8|Meis2|ENSMUSG00000027210.21|Meis homeobox 2	ENSMUST00000110908.9|Meis2|ENSMUSG00000027210.21|Meis homeobox 2
mm39_v1_chr3_+_95566082_95566168	0.764908	UGGUCCC	ENSMUST00000037947.15|Mcl1|ENSMUSG00000038612.17|myeloid cell leukemia sequence 1	ENSMUST00000178686.2|Mcl1|ENSMUSG00000038612.17|myeloid cell leukemia sequence 1
mm39_v1_chrX_-_56438380_56438400	0.755215	UGGUCCC	ENSMUST00000143310.2|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000098470.9|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000114726.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr4_+_65042411_65042411	0.733177	UGGUCCC	ENSMUST00000084501.4|Pappa|ENSMUSG00000028370.8|pregnancy-associated plasma protein A
mm39_v1_chr3_-_84212069_84212116	0.730719	UGGUCCC	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr2_-_174314741_174314874	0.726849	UGGUCCC	ENSMUST00000016401.15|Prelid3b|ENSMUSG00000016257.16|PRELI domain containing 3B
mm39_v1_chr11_-_69811890_69811911	0.723062	UGGUCCC	ENSMUST00000108609.8|Eif5a|ENSMUSG00000078812.11|eukaryotic translation initiation factor 5A	ENSMUST00000108608.8|Eif5a|ENSMUSG00000078812.11|eukaryotic translation initiation factor 5A	ENSMUST00000164359.8|Eif5a|ENSMUSG00000078812.11|eukaryotic translation initiation factor 5A
mm39_v1_chr15_-_81284244_81284294	0.721677	UGGUCCC	ENSMUST00000172107.8|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000169204.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000163382.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13
mm39_v1_chr10_-_108846816_108846844	0.719496	UGGUCCC	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr5_+_115149170_115149269	0.687855	UGGUCCC	ENSMUST00000031530.9|Sppl3|ENSMUSG00000029550.12|signal peptide peptidase 3
mm39_v1_chr6_+_55313409_55313423	0.686403	UGGUCCC	ENSMUST00000004774.4|Aqp1|ENSMUSG00000004655.6|aquaporin 1
mm39_v1_chr12_+_17594795_17594893	0.67989	UGGUCCC	ENSMUST00000171737.3|Odc1|ENSMUSG00000011179.9|ornithine decarboxylase, structural 1
mm39_v1_chr8_+_108020092_108020118	0.676018	UGGUCCC	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr8_+_55407872_55407889	0.673807	UGGUCCC	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr6_-_18514801_18514859	0.655775	UGGUCCC	ENSMUST00000090601.12|Cttnbp2|ENSMUSG00000000416.17|cortactin binding protein 2
mm39_v1_chr12_-_84265609_84265663	0.652585	UGGUCCC	ENSMUST00000046266.13|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein	ENSMUST00000220974.2|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein
mm39_v1_chr2_-_72810782_72810811	0.634776	UGGUCCC	ENSMUST00000102689.10|Sp3|ENSMUSG00000027109.17|trans-acting transcription factor 3
mm39_v1_chr19_+_38825005_38825056	0.633094	UGGUCCC	ENSMUST00000037302.6|Tbc1d12|ENSMUSG00000048720.9|TBC1D12: TBC1 domain family, member 12
mm39_v1_chr2_-_164753480_164753677	0.611207	UGGUCCC	ENSMUST00000041361.14|Zfp335|ENSMUSG00000039834.18|zinc finger protein 335
mm39_v1_chr19_+_44977512_44977555	0.604906	UGGUCCC	ENSMUST00000026225.15|Sema4g|ENSMUSG00000025207.17|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm39_v1_chr9_+_75922137_75922337	0.601767	UGGUCCC	ENSMUST00000008052.13|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000183425.8|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000183979.8|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000117981.3|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm39_v1_chr4_+_132857816_132857901	0.597346	UGGUCCC	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr11_-_18968979_18968990	0.592791	UGGUCCC	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chrX_-_141173330_141173341	0.58703	UGGUCCC	ENSMUST00000112907.8|Acsl4|ENSMUSG00000031278.13|acyl-CoA synthetase long-chain family member 4
mm39_v1_chr9_+_121946321_121946401	0.580068	UGGUCCC	ENSMUST00000119215.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000146832.8|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000118886.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000120173.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000139181.2|Snrk|ENSMUSG00000038145.18|SNF related kinase
mm39_v1_chr1_-_39616445_39616508	0.573768	UGGUCCC	ENSMUST00000062525.11|Rnf149|ENSMUSG00000048234.14|ring finger protein 149
mm39_v1_chr15_-_98505508_98505519	0.566568	UGGUCCC	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr5_+_53713137_53713176	0.56557	UGGUCCC	ENSMUST00000087360.9|Rbpj|ENSMUSG00000039191.13|recombination signal binding protein for immunoglobulin kappa J region
mm39_v1_chr11_+_94881861_94881916	0.546191	UGGUCCC	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chr15_-_93173032_93173060	0.528913	UGGUCCC	ENSMUST00000057896.5|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000049484.13|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000230063.2|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1
mm39_v1_chr2_+_30023758_30023818	0.515845	UGGUCCC	ENSMUST00000044556.12|Tbc1d13|ENSMUSG00000039678.13|TBC1 domain family, member 13
mm39_v1_chr7_-_132616977_132617058	0.4959	UGGUCCC	ENSMUST00000169570.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr1_-_63153675_63153826	0.486816	UGGUCCC	ENSMUST00000097718.9|Ino80d|ENSMUSG00000040865.16|INO80 complex subunit D
mm39_v1_chr11_-_101010640_101010674	0.479645	UGGUCCC	ENSMUST00000107295.10|Retreg3|ENSMUSG00000017802.15|reticulophagy regulator family member 3
mm39_v1_chr13_-_40887244_40887313	0.473738	UGGUCCC	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr7_-_105289515_105289623	0.473189	UGGUCCC	ENSMUST00000133519.8|Arfip2|ENSMUSG00000030881.16|ADP-ribosylation factor interacting protein 2	ENSMUST00000209550.2|Arfip2|ENSMUSG00000030881.16|ADP-ribosylation factor interacting protein 2	ENSMUST00000210911.2|Arfip2|ENSMUSG00000030881.16|ADP-ribosylation factor interacting protein 2	ENSMUST00000084782.10|Arfip2|ENSMUSG00000030881.16|ADP-ribosylation factor interacting protein 2	ENSMUST00000131446.8|Arfip2|ENSMUSG00000030881.16|ADP-ribosylation factor interacting protein 2
mm39_v1_chr15_+_100366886_100366954	0.465002	UGGUCCC	ENSMUST00000037001.10|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1	ENSMUST00000230294.2|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1
mm39_v1_chr3_-_89177796_89177877	0.464681	UGGUCCC	ENSMUST00000107460.8|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000029565.11|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000130230.2|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1
mm39_v1_chr17_-_47015928_47016037	0.455956	UGGUCCC	ENSMUST00000002839.9|Ppp2r5d|ENSMUSG00000059409.10|protein phosphatase 2, regulatory subunit B', delta	ENSMUST00000233988.2|Ppp2r5d|ENSMUSG00000059409.10|protein phosphatase 2, regulatory subunit B', delta
mm39_v1_chr7_-_105049197_105049261	0.453871	UGGUCCC	ENSMUST00000048079.14|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000118726.8|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000074686.10|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000122327.7|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000179474.9|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2
mm39_v1_chr11_+_75570085_75570167	0.446667	UGGUCCC	ENSMUST00000017920.14|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108426.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108425.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000093115.4|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog
mm39_v1_chr16_-_4867703_4867756	0.438357	UGGUCCC	ENSMUST00000115844.3|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)	ENSMUST00000023189.15|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)
mm39_v1_chr10_-_78427721_78427798	0.429166	UGGUCCC	ENSMUST00000040580.7|Syde1|ENSMUSG00000032714.7|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
mm39_v1_chr2_+_30282266_30282317	0.421641	UGGUCCC	ENSMUST00000028209.15|Dolpp1|ENSMUSG00000026856.15|dolichyl pyrophosphate phosphatase 1
mm39_v1_chr9_+_66065488_66065553	0.39646	UGGUCCC	ENSMUST00000034944.9|Dapk2|ENSMUSG00000032380.10|death-associated protein kinase 2	ENSMUST00000238682.2|Dapk2|ENSMUSG00000032380.10|death-associated protein kinase 2
mm39_v1_chr17_-_56343625_56343647	0.393881	UGGUCCC	ENSMUST00000003268.11|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr2_+_158251761_158251783	0.391984	UGGUCCC	ENSMUST00000109486.9|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)	ENSMUST00000046274.12|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)
mm39_v1_chr4_-_129534853_129534873	0.391272	UGGUCCC	ENSMUST00000046425.16|Txlna|ENSMUSG00000053841.16|taxilin alpha	ENSMUST00000133803.8|Txlna|ENSMUSG00000053841.16|taxilin alpha
mm39_v1_chr7_-_18883113_18883216	0.386291	UGGUCCC	ENSMUST00000032566.3|Qpctl|ENSMUSG00000030407.3|glutaminyl-peptide cyclotransferase-like
mm39_v1_chr19_+_29499671_29499682	0.384619	UGGUCCC	ENSMUST00000043610.13|Ric1|ENSMUSG00000038658.16|RAB6A GEF complex partner 1
mm39_v1_chr13_-_46881388_46881482	0.377695	UGGUCCC	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr8_+_34089597_34089684	0.367101	UGGUCCC	ENSMUST00000009774.11|Ppp2cb|ENSMUSG00000009630.11|protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
mm39_v1_chr2_-_34645241_34645268	0.35031	UGGUCCC	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr2_+_118731860_118731969	0.3468	UGGUCCC	ENSMUST00000036578.7|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr15_+_101071948_101072029	0.346068	UGGUCCC	ENSMUST00000000544.12|Acvr1b|ENSMUSG00000000532.12|activin A receptor, type 1B
mm39_v1_chr10_+_42637479_42637492	0.345408	UGGUCCC	ENSMUST00000019937.5|Sec63|ENSMUSG00000019802.14|SEC63-like (S. cerevisiae)
mm39_v1_chr4_+_126180585_126180596	0.343089	UGGUCCC	ENSMUST00000070132.7|Col8a2|ENSMUSG00000056174.9|collagen, type VIII, alpha 2
mm39_v1_chr5_+_142615292_142615348	0.342649	UGGUCCC	ENSMUST00000036872.16|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2	ENSMUST00000110778.2|Wipi2|ENSMUSG00000029578.16|WD repeat domain, phosphoinositide interacting 2
mm39_v1_chr3_-_52012462_52012497	0.333706	UGGUCCC	ENSMUST00000121440.4|Maml3|ENSMUSG00000061143.16|mastermind like transcriptional coactivator 3
mm39_v1_chr11_-_75345482_75345549	0.324072	UGGUCCC	ENSMUST00000173320.8|Wdr81|ENSMUSG00000045374.19|WD repeat domain 81
mm39_v1_chr2_+_156681927_156681952	0.321173	UGGUCCC	ENSMUST00000081335.13|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr7_-_33867940_33868007	0.319669	UGGUCCC	ENSMUST00000102746.11|Uba2|ENSMUSG00000052997.16|ubiquitin-like modifier activating enzyme 2
mm39_v1_chr1_-_60605867_60605938	0.309182	UGGUCCC	ENSMUST00000027168.12|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000090293.11|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000140485.8|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm39_v1_chr11_+_29122890_29122926	0.307849	UGGUCCC	ENSMUST00000102856.9|Ppp4r3b|ENSMUSG00000020463.16|protein phosphatase 4 regulatory subunit 3B	ENSMUST00000020755.12|Ppp4r3b|ENSMUSG00000020463.16|protein phosphatase 4 regulatory subunit 3B
mm39_v1_chr2_-_48839276_48839288	0.298997	UGGUCCC	ENSMUST00000028098.11|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr3_+_88857929_88857975	0.291014	UGGUCCC	ENSMUST00000186583.7|Ash1l|ENSMUSG00000028053.14|ASH1 like histone lysine methyltransferase
mm39_v1_chr2_-_164876690_164876787	0.274015	UGGUCCC	ENSMUST00000122070.2|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000121377.8|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000153905.2|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000040381.15|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5
mm39_v1_chr4_+_54947976_54948054	0.26575	UGGUCCC	ENSMUST00000098070.10|Zfp462|ENSMUSG00000060206.12|zinc finger protein 462
mm39_v1_chr5_-_138153956_138154006	0.247695	UGGUCCC	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr15_-_79718423_79718447	0.24654	UGGUCCC	ENSMUST00000109623.8|Cbx6|ENSMUSG00000089715.13|chromobox 6	ENSMUST00000023060.13|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000089299.6|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000109625.8|Cbx6|ENSMUSG00000089715.13|chromobox 6
mm39_v1_chr10_+_127928622_127928700	0.23944	UGGUCCC	ENSMUST00000219072.2|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000045621.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000170054.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A
mm39_v1_chr8_+_96078886_96078957	0.237424	UGGUCCC	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr19_-_60569323_60569468	0.223304	UGGUCCC	ENSMUST00000111460.5|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000166712.9|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000081790.15|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1
mm39_v1_chr17_-_34243608_34243654	0.20896	UGGUCCC	ENSMUST00000025183.9|Ring1|ENSMUSG00000024325.9|ring finger protein 1
mm39_v1_chr11_-_78277384_78277433	0.192435	UGGUCCC	ENSMUST00000108294.2|Foxn1|ENSMUSG00000002057.5|forkhead box N1
mm39_v1_chr4_-_129083335_129083387	0.189232	UGGUCCC	ENSMUST00000106061.9|S100pbp|ENSMUSG00000040928.16|S100P binding protein	ENSMUST00000072431.13|S100pbp|ENSMUSG00000040928.16|S100P binding protein
mm39_v1_chr1_+_191449946_191450017	0.186545	UGGUCCC	ENSMUST00000133076.7|Lpgat1|ENSMUSG00000026623.17|lysophosphatidylglycerol acyltransferase 1	ENSMUST00000110855.8|Lpgat1|ENSMUSG00000026623.17|lysophosphatidylglycerol acyltransferase 1
mm39_v1_chr11_+_20493306_20493338	0.179723	UGGUCCC	ENSMUST00000093292.11|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr19_-_7218512_7218566	0.164998	UGGUCCC	ENSMUST00000025675.11|Naa40|ENSMUSG00000024764.11|N(alpha)-acetyltransferase 40, NatD catalytic subunit
mm39_v1_chr6_-_85046430_85046505	0.151158	UGGUCCC	ENSMUST00000160197.6|Exoc6b|ENSMUSG00000033769.17|exocyst complex component 6B
mm39_v1_chr1_-_22845124_22845203	0.14623	UGGUCCC	ENSMUST00000115273.10|Rims1|ENSMUSG00000041670.20|regulating synaptic membrane exocytosis 1
mm39_v1_chr11_-_120524362_120524431	0.122472	UGGUCCC	ENSMUST00000058162.14|Mafg|ENSMUSG00000051510.14|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm39_v1_chr8_-_48166955_48166973	0.112973	UGGUCCC	ENSMUST00000212175.2|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein	ENSMUST00000038738.7|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein
mm39_v1_chr5_-_34093678_34093757	0.112927	UGGUCCC	ENSMUST00000030993.8|Nelfa|ENSMUSG00000029111.8|negative elongation factor complex member A, Whsc2
mm39_v1_chr19_+_8718777_8718820	0.10925	UGGUCCC	ENSMUST00000176381.8|Stx5a|ENSMUSG00000010110.18|syntaxin 5A
mm39_v1_chr13_-_54835508_54835623	0.107255	UGGUCCC	ENSMUST00000177950.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44	ENSMUST00000146931.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44
mm39_v1_chr4_-_156319232_156319332	0.100195	UGGUCCC	ENSMUST00000105569.5|Klhl17|ENSMUSG00002076083.1|kelch-like 17
mm39_v1_chr11_+_78079243_78079311	0.0945468	UGGUCCC	ENSMUST00000002128.14|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family	ENSMUST00000150941.8|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family
mm39_v1_chr11_-_103588605_103588724	0.0789259	UGGUCCC	ENSMUST00000021329.14|Gosr2|ENSMUSG00000020946.14|golgi SNAP receptor complex member 2
mm39_v1_chr7_+_99184645_99184709	0.0686832	UGGUCCC	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr10_+_22520910_22521008	0.0389648	UGGUCCC	ENSMUST00000042261.5|Slc2a12|ENSMUSG00000037490.6|solute carrier family 2 (facilitated glucose transporter), member 12
mm39_v1_chr10_-_116984386_116984452	0.0296053	UGGUCCC	ENSMUST00000020381.5|Frs2|ENSMUSG00000020170.5|fibroblast growth factor receptor substrate 2
mm39_v1_chr11_+_105183463_105183495	0.0135137	UGGUCCC	ENSMUST00000100335.10|Mrc2|ENSMUSG00000020695.15|mannose receptor, C type 2	ENSMUST00000021038.5|Mrc2|ENSMUSG00000020695.15|mannose receptor, C type 2
