mm39_v1_chr6_+_114259596_114259777	38.545	UGUGCUU	ENSMUST00000032454.8|Slc6a1|ENSMUSG00000030310.11|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm39_v1_chr5_+_37025810_37025914	38.2079	UGUGCUU	ENSMUST00000031003.11|Ppp2r2c|ENSMUSG00000029120.11|protein phosphatase 2, regulatory subunit B, gamma
mm39_v1_chr13_-_54914366_54914408	37.8292	UGUGCUU	ENSMUST00000036825.14|Sncb|ENSMUSG00000034891.14|synuclein, beta
mm39_v1_chr7_+_108610032_108610042	36.273	UGUGCUU	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr19_-_8816530_8816632	35.7597	UGUGCUU	ENSMUST00000096259.6|Gng3|ENSMUSG00000071658.6|guanine nucleotide binding protein (G protein), gamma 3
mm39_v1_chr2_+_102488985_102489014	33.551	UGUGCUU	ENSMUST00000080210.10|Slc1a2|ENSMUSG00000005089.16|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm39_v1_chr8_-_70573465_70573523	31.8804	UGUGCUU	ENSMUST00000002412.9|Ncan|ENSMUSG00000002341.9|neurocan
mm39_v1_chr2_-_127363251_127363295	30.7223	UGUGCUU	ENSMUST00000028850.15|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin	ENSMUST00000103215.11|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin
mm39_v1_chr3_+_96088467_96088483	29.912	UGUGCUU	ENSMUST00000035371.9|Sv2a|ENSMUSG00000038486.10|synaptic vesicle glycoprotein 2 a
mm39_v1_chr1_-_83385911_83385943	29.2874	UGUGCUU	ENSMUST00000160953.8|Sphkap|ENSMUSG00000026163.18|SPHK1 interactor, AKAP domain containing
mm39_v1_chr7_-_127423641_127423751	29.1706	UGUGCUU	ENSMUST00000106267.5|Stx1b|ENSMUSG00000030806.7|syntaxin 1B
mm39_v1_chr11_+_42310557_42310612	28.8821	UGUGCUU	ENSMUST00000007797.10|Gabrb2|ENSMUSG00000007653.13|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm39_v1_chr3_+_75464837_75464869	28.6688	UGUGCUU	ENSMUST00000161776.8|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1	ENSMUST00000029423.9|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm39_v1_chr3_-_80710097_80710147	28.4845	UGUGCUU	ENSMUST00000075316.10|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)	ENSMUST00000107745.8|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm39_v1_chr3_-_107425316_107425339	28.3525	UGUGCUU	ENSMUST00000169449.8|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17	ENSMUST00000029499.15|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17
mm39_v1_chr2_-_32737208_32737235	27.3208	UGUGCUU	ENSMUST00000077458.7|Stxbp1|ENSMUSG00000026797.17|syntaxin binding protein 1	ENSMUST00000208840.2|Stxbp1|ENSMUSG00000026797.17|syntaxin binding protein 1
mm39_v1_chr2_+_92745426_92745460	27.1013	UGUGCUU	ENSMUST00000028648.3|Syt13|ENSMUSG00000027220.3|synaptotagmin XIII
mm39_v1_chr17_+_81251997_81252073	26.2784	UGUGCUU	ENSMUST00000025092.5|Tmem178|ENSMUSG00000024245.5|transmembrane protein 178
mm39_v1_chr7_+_57069417_57069440	25.9119	UGUGCUU	ENSMUST00000085240.11|Gabrb3|ENSMUSG00000033676.14|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm39_v1_chr7_-_108682491_108682544	25.6398	UGUGCUU	ENSMUST00000120876.2|Ric3|ENSMUSG00000048330.15|RIC3 acetylcholine receptor chaperone	ENSMUST00000055993.13|Ric3|ENSMUSG00000048330.15|RIC3 acetylcholine receptor chaperone
mm39_v1_chr15_+_91949032_91949052	25.3088	UGUGCUU	ENSMUST00000169825.8|Cntn1|ENSMUSG00000055022.15|contactin 1
mm39_v1_chr16_-_67417768_67417810	25.1332	UGUGCUU	ENSMUST00000114292.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2	ENSMUST00000120898.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2
mm39_v1_chr17_+_24707711_24707849	24.7379	UGUGCUU	ENSMUST00000024958.9|Caskin1|ENSMUSG00000033597.10|CASK interacting protein 1	ENSMUST00000234717.2|Caskin1|ENSMUSG00000033597.10|CASK interacting protein 1
mm39_v1_chr10_-_80861239_80861246	24.6975	UGUGCUU	ENSMUST00000055125.5|Diras1|ENSMUSG00000043670.5|DIRAS family, GTP-binding RAS-like 1
mm39_v1_chr8_+_55407872_55407889	24.5037	UGUGCUU	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr4_+_42916666_42916713	24.456	UGUGCUU	ENSMUST00000132173.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24	ENSMUST00000107975.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24
mm39_v1_chr4_+_120711974_120712041	24.2292	UGUGCUU	ENSMUST00000071093.9|Rims3|ENSMUSG00000032890.18|regulating synaptic membrane exocytosis 3
mm39_v1_chr10_-_108846816_108846844	24.1145	UGUGCUU	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr13_-_52685305_52685321	23.3458	UGUGCUU	ENSMUST00000057442.8|Diras2|ENSMUSG00000047842.8|DIRAS family, GTP-binding RAS-like 2
mm39_v1_chr5_+_130477642_130477671	22.9345	UGUGCUU	ENSMUST00000111288.4|Caln1|ENSMUSG00000060371.13|calneuron 1
mm39_v1_chr1_+_115612458_115612486	22.761	UGUGCUU	ENSMUST00000043725.9|Cntnap5a|ENSMUSG00000070695.5|contactin associated protein-like 5A
mm39_v1_chr8_+_96429665_96429698	22.6133	UGUGCUU	ENSMUST00000073139.14|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000080666.8|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000212160.2|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4
mm39_v1_chr13_-_14697770_14697811	22.4804	UGUGCUU	ENSMUST00000110516.3|Hecw1|ENSMUSG00000021301.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr2_-_104240679_104240679	21.7872	UGUGCUU	ENSMUST00000136156.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000141159.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000089726.10|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene
mm39_v1_chr8_-_72124359_72124416	21.7634	UGUGCUU	ENSMUST00000177517.8|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A	ENSMUST00000030170.15|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A
mm39_v1_chr10_-_81318489_81318559	21.4434	UGUGCUU	ENSMUST00000120508.8|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5	ENSMUST00000238823.2|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5	ENSMUST00000118763.8|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5
mm39_v1_chr16_+_11802445_11802445	21.2311	UGUGCUU	ENSMUST00000170672.9|Shisa9|ENSMUSG00000022494.16|shisa family member 9	ENSMUST00000023138.8|Shisa9|ENSMUSG00000022494.16|shisa family member 9
mm39_v1_chr3_-_125732255_125732268	20.89	UGUGCUU	ENSMUST00000057944.12|Ugt8a|ENSMUSG00000032854.13|UDP galactosyltransferase 8A
mm39_v1_chr15_+_30172716_30172748	20.5277	UGUGCUU	ENSMUST00000081728.7|Ctnnd2|ENSMUSG00000022240.11|catenin (cadherin associated protein), delta 2
mm39_v1_chr6_+_21215472_21215502	20.4612	UGUGCUU	ENSMUST00000081542.6|Kcnd2|ENSMUSG00000060882.6|potassium voltage-gated channel, Shal-related family, member 2
mm39_v1_chr6_+_86055048_86055071	20.4118	UGUGCUU	ENSMUST00000032069.8|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chr1_+_191873078_191873130	20.2948	UGUGCUU	ENSMUST00000078470.12|Kcnh1|ENSMUSG00000058248.13|potassium voltage-gated channel, subfamily H (eag-related), member 1	ENSMUST00000110844.3|Kcnh1|ENSMUSG00000058248.13|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm39_v1_chr12_+_29578354_29578468	20.0077	UGUGCUU	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr6_+_103487973_103488039	19.7551	UGUGCUU	ENSMUST00000066905.9|Chl1|ENSMUSG00000030077.12|cell adhesion molecule L1-like
mm39_v1_chr5_+_27109679_27109709	19.6629	UGUGCUU	ENSMUST00000120555.8|Dpp6|ENSMUSG00000061576.16|dipeptidylpeptidase 6
mm39_v1_chr9_-_44710480_44710604	19.0462	UGUGCUU	ENSMUST00000214833.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213972.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000214431.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213363.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000114705.9|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000002100.8|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25
mm39_v1_chr18_-_25886750_25886807	18.886	UGUGCUU	ENSMUST00000224553.2|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4	ENSMUST00000025117.14|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4
mm39_v1_chr3_-_33136153_33136217	18.733	UGUGCUU	ENSMUST00000108225.10|Pex5l|ENSMUSG00000027674.17|peroxisomal biogenesis factor 5-like
mm39_v1_chr13_+_89687915_89687915	18.5961	UGUGCUU	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr5_+_125609440_125609457	18.2943	UGUGCUU	ENSMUST00000031446.7|Tmem132b|ENSMUSG00000070498.4|transmembrane protein 132B
mm39_v1_chr18_+_36098090_36098165	18.1291	UGUGCUU	ENSMUST00000176873.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000177432.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000175734.2|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2
mm39_v1_chr3_-_158267771_158267939	18.1197	UGUGCUU	ENSMUST00000199890.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000238317.3|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000200137.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000106044.6|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7
mm39_v1_chr7_+_120991489_120991513	17.6916	UGUGCUU	ENSMUST00000084628.5|Hs3st2|ENSMUSG00000046321.9|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm39_v1_chr11_+_7013422_7013489	17.628	UGUGCUU	ENSMUST00000020706.5|Adcy1|ENSMUSG00000020431.6|adenylate cyclase 1
mm39_v1_chr13_+_75237939_75237952	17.4961	UGUGCUU	ENSMUST00000022075.6|Pcsk1|ENSMUSG00000021587.6|proprotein convertase subtilisin/kexin type 1
mm39_v1_chr7_+_51271742_51271762	17.4109	UGUGCUU	ENSMUST00000032710.7|Slc17a6|ENSMUSG00000030500.7|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm39_v1_chr12_-_67269323_67269354	16.9636	UGUGCUU	ENSMUST00000037181.16|Mdga2|ENSMUSG00000034912.19|MAM domain containing glycosylphosphatidylinositol anchor 2
mm39_v1_chr1_-_22845124_22845203	16.9114	UGUGCUU	ENSMUST00000115273.10|Rims1|ENSMUSG00000041670.20|regulating synaptic membrane exocytosis 1
mm39_v1_chr2_+_71811526_71811631	16.6762	UGUGCUU	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr6_-_126621751_126621768	16.6614	UGUGCUU	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr17_-_91400499_91400504	16.367	UGUGCUU	ENSMUST00000160844.10|Nrxn1|ENSMUSG00000024109.19|neurexin I
mm39_v1_chr14_+_119375753_119375753	16.3109	UGUGCUU	ENSMUST00000065904.5|Hs6st3|ENSMUSG00000053465.7|heparan sulfate 6-O-sulfotransferase 3
mm39_v1_chr10_+_52566616_52566651	16.2825	UGUGCUU	ENSMUST00000105473.3|Slc35f1|ENSMUSG00000038602.8|solute carrier family 35, member F1
mm39_v1_chr7_+_90739904_90739959	16.277	UGUGCUU	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr11_+_17001818_17001899	16.246	UGUGCUU	ENSMUST00000058159.6|Cnrip1|ENSMUSG00000044629.6|cannabinoid receptor interacting protein 1
mm39_v1_chr11_+_54194624_54194670	16.1837	UGUGCUU	ENSMUST00000093106.12|Acsl6|ENSMUSG00000020333.18|acyl-CoA synthetase long-chain family member 6
mm39_v1_chr6_-_144994534_144994551	16.0595	UGUGCUU	ENSMUST00000032402.12|Bcat1|ENSMUSG00000030268.18|branched chain aminotransferase 1, cytosolic
mm39_v1_chr5_-_129030367_129030550	15.9819	UGUGCUU	ENSMUST00000111346.6|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2	ENSMUST00000200470.5|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2
mm39_v1_chr5_+_34153328_34153375	15.9062	UGUGCUU	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr15_+_80171435_80171453	15.8758	UGUGCUU	ENSMUST00000160424.8|Cacna1i|ENSMUSG00000022416.16|calcium channel, voltage-dependent, alpha 1I subunit
mm39_v1_chr10_-_5872386_5872405	15.8043	UGUGCUU	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr14_+_27344385_27344500	15.7264	UGUGCUU	ENSMUST00000210135.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000090302.6|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000211087.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr11_-_97466035_97466061	15.2922	UGUGCUU	ENSMUST00000107596.9|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238314.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238597.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238342.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1
mm39_v1_chr11_-_94364914_94365024	15.102	UGUGCUU	ENSMUST00000107786.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107791.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000103166.9|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107792.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000100561.10|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107793.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107788.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107790.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107789.8|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000107785.2|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit	ENSMUST00000021234.15|Cacna1g|ENSMUSG00000020866.18|calcium channel, voltage-dependent, T type, alpha 1G subunit
mm39_v1_chr13_-_95386776_95386844	15.0068	UGUGCUU	ENSMUST00000162153.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000160957.9|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000159598.2|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B	ENSMUST00000162412.8|Pde8b|ENSMUSG00000021684.18|phosphodiesterase 8B
mm39_v1_chr9_+_111268131_111268165	14.8826	UGUGCUU	ENSMUST00000111879.5|Dclk3|ENSMUSG00000032500.11|doublecortin-like kinase 3
mm39_v1_chr2_+_54326329_54326434	14.8811	UGUGCUU	ENSMUST00000112636.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13	ENSMUST00000112635.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13	ENSMUST00000112634.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13
mm39_v1_chr8_+_67150055_67150080	14.5755	UGUGCUU	ENSMUST00000039303.7|Npy1r|ENSMUSG00000036437.7|neuropeptide Y receptor Y1
mm39_v1_chr9_+_26645024_26645120	14.3728	UGUGCUU	ENSMUST00000160899.8|B3gat1|ENSMUSG00000045994.18|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	ENSMUST00000161431.3|B3gat1|ENSMUSG00000045994.18|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	ENSMUST00000159799.8|B3gat1|ENSMUSG00000045994.18|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
mm39_v1_chr8_+_24159669_24159690	14.3414	UGUGCUU	ENSMUST00000042352.11|Zmat4|ENSMUSG00000037492.17|zinc finger, matrin type 4	ENSMUST00000207301.2|Zmat4|ENSMUSG00000037492.17|zinc finger, matrin type 4
mm39_v1_chr6_+_107506678_107506741	14.284	UGUGCUU	ENSMUST00000049285.10|Lrrn1|ENSMUSG00000034648.10|leucine rich repeat protein 1, neuronal
mm39_v1_chr2_-_163760603_163760603	14.1953	UGUGCUU	ENSMUST00000044734.3|Rims4|ENSMUSG00000035226.6|regulating synaptic membrane exocytosis 4
mm39_v1_chr16_-_74208180_74208314	14.1238	UGUGCUU	ENSMUST00000117200.8|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr9_-_108067552_108067617	13.9799	UGUGCUU	ENSMUST00000035208.14|Bsn|ENSMUSG00000032589.15|bassoon
mm39_v1_chr9_-_113855776_113855833	13.9637	UGUGCUU	ENSMUST00000035090.14|Fbxl2|ENSMUSG00000032507.16|F-box and leucine-rich repeat protein 2
mm39_v1_chr7_-_118594365_118594434	13.8708	UGUGCUU	ENSMUST00000008878.10|Gprc5b|ENSMUSG00000008734.10|G protein-coupled receptor, family C, group 5, member B
mm39_v1_chr9_+_34400016_34400041	13.815	UGUGCUU	ENSMUST00000187625.7|Kirrel3|ENSMUSG00000032036.16|kirre like nephrin family adhesion molecule 3
mm39_v1_chr5_+_146321757_146321804	13.7718	UGUGCUU	ENSMUST00000016143.9|Wasf3|ENSMUSG00000029636.12|WASP family, member 3
mm39_v1_chr2_+_156262756_156262837	13.7546	UGUGCUU	ENSMUST00000103137.10|Epb41l1|ENSMUSG00000027624.21|erythrocyte membrane protein band 4.1 like 1
mm39_v1_chr6_+_45036970_45037001	13.7439	UGUGCUU	ENSMUST00000114641.8|Cntnap2|ENSMUSG00000039419.18|contactin associated protein-like 2
mm39_v1_chr1_-_25267894_25267916	13.4243	UGUGCUU	ENSMUST00000126626.8|Adgrb3|ENSMUSG00000033569.18|adhesion G protein-coupled receptor B3
mm39_v1_chr15_-_78602971_78602971	13.3999	UGUGCUU	ENSMUST00000088592.6|Elfn2|ENSMUSG00000043460.8|leucine rich repeat and fibronectin type III, extracellular 2
mm39_v1_chr15_+_99568208_99568278	13.3885	UGUGCUU	ENSMUST00000023758.9|Asic1|ENSMUSG00000023017.11|acid-sensing (proton-gated) ion channel 1
mm39_v1_chr2_-_162502994_162503067	13.3098	UGUGCUU	ENSMUST00000109442.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109445.9|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109443.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109441.2|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T
mm39_v1_chr12_+_95658987_95659011	13.3081	UGUGCUU	ENSMUST00000057324.4|Flrt2|ENSMUSG00000047414.7|fibronectin leucine rich transmembrane protein 2
mm39_v1_chr6_-_85479962_85480016	13.2084	UGUGCUU	ENSMUST00000159062.8|Fbxo41|ENSMUSG00000047013.16|F-box protein 41
mm39_v1_chr19_-_5135510_5135559	12.8859	UGUGCUU	ENSMUST00000140389.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000151413.2|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000077066.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A
mm39_v1_chrX_+_65692924_65693001	12.8851	UGUGCUU	ENSMUST00000166241.2|Slitrk2|ENSMUSG00000036790.6|SLIT and NTRK-like family, member 2
mm39_v1_chr7_+_29003382_29003432	12.8427	UGUGCUU	ENSMUST00000049977.13|Dpf1|ENSMUSG00000030584.15|D4, zinc and double PHD fingers family 1
mm39_v1_chr9_+_45049687_45049701	12.5987	UGUGCUU	ENSMUST00000060125.7|Scn4b|ENSMUSG00000046480.7|sodium channel, type IV, beta
mm39_v1_chr2_+_28337953_28337953	12.4657	UGUGCUU	ENSMUST00000189694.2|Ppp1r26|ENSMUSG00000035829.14|protein phosphatase 1, regulatory subunit 26	ENSMUST00000040324.14|Ppp1r26|ENSMUSG00000035829.14|protein phosphatase 1, regulatory subunit 26
mm39_v1_chr3_+_138447956_138448094	12.4196	UGUGCUU	ENSMUST00000029800.9|Tspan5|ENSMUSG00000028152.11|tetraspanin 5
mm39_v1_chr11_-_90281721_90281753	11.9469	UGUGCUU	ENSMUST00000004051.8|Hlf|ENSMUSG00000003949.17|hepatic leukemia factor
mm39_v1_chr2_-_52566583_52566601	11.9382	UGUGCUU	ENSMUST00000178799.8|Cacnb4|ENSMUSG00000017412.16|calcium channel, voltage-dependent, beta 4 subunit
mm39_v1_chr9_+_45029080_45029179	11.7133	UGUGCUU	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr2_-_167032068_167032093	11.6171	UGUGCUU	ENSMUST00000059826.10|Kcnb1|ENSMUSG00000050556.10|potassium voltage gated channel, Shab-related subfamily, member 1
mm39_v1_chr4_+_137434767_137434838	11.3807	UGUGCUU	ENSMUST00000097837.11|Rap1gap|ENSMUSG00000041351.17|Rap1 GTPase-activating protein
mm39_v1_chr1_+_42734889_42734937	11.3223	UGUGCUU	ENSMUST00000054883.4|Pou3f3|ENSMUSG00000045515.5|POU domain, class 3, transcription factor 3
mm39_v1_chr19_-_18978463_18978483	11.2225	UGUGCUU	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr8_+_84626715_84626740	11.1663	UGUGCUU	ENSMUST00000141158.8|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1
mm39_v1_chr4_+_125384481_125384495	11.0311	UGUGCUU	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr1_+_42992109_42992188	10.9234	UGUGCUU	ENSMUST00000179766.3|Gpr45|ENSMUSG00000041907.10|G protein-coupled receptor 45
mm39_v1_chr13_+_83652352_83652374	10.9047	UGUGCUU	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr13_-_55635851_55635924	10.8936	UGUGCUU	ENSMUST00000109921.9|Dbn1|ENSMUSG00000034675.18|drebrin 1	ENSMUST00000109923.9|Dbn1|ENSMUSG00000034675.18|drebrin 1	ENSMUST00000021950.15|Dbn1|ENSMUSG00000034675.18|drebrin 1
mm39_v1_chr9_-_4796217_4796267	10.8625	UGUGCUU	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr4_+_119671688_119671723	10.6629	UGUGCUU	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr4_-_25800083_25800146	10.6157	UGUGCUU	ENSMUST00000084770.5|Fut9|ENSMUSG00000055373.9|fucosyltransferase 9
mm39_v1_chr6_-_57802131_57802151	10.5672	UGUGCUU	ENSMUST00000204878.3|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000145608.7|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000203212.3|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000114297.5|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1
mm39_v1_chrX_+_158197568_158197585	10.5605	UGUGCUU	ENSMUST00000112471.9|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2
mm39_v1_chr2_+_106523532_106523624	10.515	UGUGCUU	ENSMUST00000111063.8|Mpped2|ENSMUSG00000016386.16|metallophosphoesterase domain containing 2
mm39_v1_chr15_-_48655329_48655459	10.4592	UGUGCUU	ENSMUST00000160658.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000100670.10|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000162830.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3
mm39_v1_chr11_-_100363551_100363585	10.4516	UGUGCUU	ENSMUST00000056665.4|Klhl11|ENSMUSG00000048732.6|kelch-like 11
mm39_v1_chr7_-_100021514_100021514	10.426	UGUGCUU	ENSMUST00000032963.10|Ppme1|ENSMUSG00000030718.10|protein phosphatase methylesterase 1
mm39_v1_chr4_+_24973419_24973419	10.3279	UGUGCUU	ENSMUST00000038920.2|Gpr63|ENSMUSG00000040372.3|G protein-coupled receptor 63
mm39_v1_chr18_-_16942289_16942384	10.3142	UGUGCUU	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr2_+_179084220_179084235	10.3007	UGUGCUU	ENSMUST00000000314.13|Cdh4|ENSMUSG00000000305.13|cadherin 4
mm39_v1_chr17_-_30107544_30107682	10.2987	UGUGCUU	ENSMUST00000171691.9|Mdga1|ENSMUSG00000043557.17|MAM domain containing glycosylphosphatidylinositol anchor 1
mm39_v1_chr8_-_39128662_39128699	10.2948	UGUGCUU	ENSMUST00000118896.2|Sgcz|ENSMUSG00000039539.14|sarcoglycan zeta
mm39_v1_chr5_-_18565353_18565395	10.2921	UGUGCUU	ENSMUST00000074694.7|Gnai1|ENSMUSG00000057614.7|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm39_v1_chr17_-_56447332_56447385	10.2624	UGUGCUU	ENSMUST00000001256.11|Sema6b|ENSMUSG00000001227.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm39_v1_chr2_+_151923449_151923544	10.2208	UGUGCUU	ENSMUST00000064061.4|Scrt2|ENSMUSG00000060257.3|scratch family zinc finger 2
mm39_v1_chr1_+_165123358_165123358	10.201	UGUGCUU	ENSMUST00000178700.8|Gpr161|ENSMUSG00000040836.16|G protein-coupled receptor 161
mm39_v1_chr1_-_184731672_184731767	10.1052	UGUGCUU	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr16_-_45830575_45830587	9.94458	UGUGCUU	ENSMUST00000130481.2|Plcxd2|ENSMUSG00000087141.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm39_v1_chr17_-_25155868_25155976	9.9232	UGUGCUU	ENSMUST00000115228.9|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000117509.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121723.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000119115.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121787.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000088345.12|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000120035.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000115229.10|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000178969.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3
mm39_v1_chr14_+_103887644_103887679	9.76891	UGUGCUU	ENSMUST00000069443.14|Slain1|ENSMUSG00000055717.14|SLAIN motif family, member 1
mm39_v1_chr7_+_26958150_26958240	9.72264	UGUGCUU	ENSMUST00000079258.7|Numbl|ENSMUSG00000063160.13|numb-like
mm39_v1_chr7_-_35453818_35453879	9.67801	UGUGCUU	ENSMUST00000051377.15|Dpy19l3|ENSMUSG00000043671.15|dpy-19-like 3 (C. elegans)
mm39_v1_chr12_+_102095260_102095433	9.52144	UGUGCUU	ENSMUST00000079020.12|Slc24a4|ENSMUSG00000041771.15|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm39_v1_chr1_+_15382676_15382676	9.51888	UGUGCUU	ENSMUST00000170146.3|Kcnb2|ENSMUSG00000092083.5|potassium voltage gated channel, Shab-related subfamily, member 2
mm39_v1_chr7_-_34512101_34512119	9.47415	UGUGCUU	ENSMUST00000078686.8|Chst8|ENSMUSG00000060402.9|carbohydrate sulfotransferase 8	ENSMUST00000205259.2|Chst8|ENSMUSG00000060402.9|carbohydrate sulfotransferase 8	ENSMUST00000154629.3|Chst8|ENSMUSG00000060402.9|carbohydrate sulfotransferase 8
mm39_v1_chr2_+_130292168_130292229	9.47104	UGUGCUU	ENSMUST00000028769.14|Ptpra|ENSMUSG00000027303.19|protein tyrosine phosphatase, receptor type, A	ENSMUST00000230981.2|Ptpra|ENSMUSG00000027303.19|protein tyrosine phosphatase, receptor type, A
mm39_v1_chrX_-_72868544_72868592	9.29239	UGUGCUU	ENSMUST00000002080.12|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4	ENSMUST00000114438.3|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4
mm39_v1_chr19_-_50667079_50667134	9.16918	UGUGCUU	ENSMUST00000209413.2|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1	ENSMUST00000072685.13|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1	ENSMUST00000164039.9|Sorcs1|ENSMUSG00000043531.17|sortilin-related VPS10 domain containing receptor 1
mm39_v1_chr16_-_18052937_18053048	9.15839	UGUGCUU	ENSMUST00000076957.7|Zdhhc8|ENSMUSG00000060166.7|zinc finger, DHHC domain containing 8
mm39_v1_chr1_-_72576089_72576158	9.09096	UGUGCUU	ENSMUST00000047786.6|Marchf4|ENSMUSG00000039372.6|membrane associated ring-CH-type finger 4
mm39_v1_chr9_-_56068282_56068360	9.05968	UGUGCUU	ENSMUST00000034876.10|Tspan3|ENSMUSG00000032324.12|tetraspanin 3
mm39_v1_chr12_-_80807454_80807502	9.03767	UGUGCUU	ENSMUST00000073251.8|Ccdc177|ENSMUSG00000062961.8|coiled-coil domain containing 177
mm39_v1_chr10_+_128247598_128247627	8.99817	UGUGCUU	ENSMUST00000096386.13|Rnf41|ENSMUSG00000025373.15|ring finger protein 41
mm39_v1_chr17_-_88105422_88105476	8.97855	UGUGCUU	ENSMUST00000055221.9|Kcnk12|ENSMUSG00000050138.9|potassium channel, subfamily K, member 12
mm39_v1_chr5_+_20112500_20112549	8.88716	UGUGCUU	ENSMUST00000101558.10|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr12_+_80509869_80509974	8.8647	UGUGCUU	ENSMUST00000038185.10|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr8_+_63404395_63404434	8.8502	UGUGCUU	ENSMUST00000119068.8|Spock3|ENSMUSG00000054162.16|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm39_v1_chr15_-_53765869_53765926	8.80962	UGUGCUU	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr2_+_116951855_116951880	8.66182	UGUGCUU	ENSMUST00000028829.13|Spred1|ENSMUSG00000027351.15|sprouty protein with EVH-1 domain 1, related sequence
mm39_v1_chrX_-_166906307_166906330	8.39288	UGUGCUU	ENSMUST00000112149.9|Frmpd4|ENSMUSG00000049176.17|FERM and PDZ domain containing 4
mm39_v1_chr5_-_113458563_113458654	8.30762	UGUGCUU	ENSMUST00000154248.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000112325.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000048112.13|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1
mm39_v1_chr3_-_56091096_56091122	8.07556	UGUGCUU	ENSMUST00000029374.8|Nbea|ENSMUSG00000027799.13|neurobeachin
mm39_v1_chr3_-_138780937_138781008	7.94829	UGUGCUU	ENSMUST00000098574.9|Rap1gds1|ENSMUSG00000028149.13|RAP1, GTP-GDP dissociation stimulator 1
mm39_v1_chr11_+_6339061_6339082	7.80455	UGUGCUU	ENSMUST00000109787.8|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr5_-_113163339_113163434	7.79846	UGUGCUU	ENSMUST00000197776.2|Grk3|ENSMUSG00000042249.12|G protein-coupled receptor kinase 3	ENSMUST00000065167.9|Grk3|ENSMUSG00000042249.12|G protein-coupled receptor kinase 3
mm39_v1_chr2_-_125565307_125565457	7.79333	UGUGCUU	ENSMUST00000042246.14|Shc4|ENSMUSG00000035109.15|SHC (Src homology 2 domain containing) family, member 4
mm39_v1_chr16_-_15412371_15412396	7.76607	UGUGCUU	ENSMUST00000115776.2|Ube2v2|ENSMUSG00000022674.16|ubiquitin-conjugating enzyme E2 variant 2	ENSMUST00000115777.10|Ube2v2|ENSMUSG00000022674.16|ubiquitin-conjugating enzyme E2 variant 2
mm39_v1_chr10_+_56253418_56253434	7.72483	UGUGCUU	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr1_+_6557455_6557563	7.675	UGUGCUU	ENSMUST00000140079.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131494.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr14_-_65335479_65335555	7.64083	UGUGCUU	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr11_+_105480796_105480857	7.60769	UGUGCUU	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr1_-_127605660_127605758	7.60612	UGUGCUU	ENSMUST00000160616.8|Tmem163|ENSMUSG00000026347.14|transmembrane protein 163
mm39_v1_chr18_+_24842493_24842512	7.52395	UGUGCUU	ENSMUST00000037097.9|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3	ENSMUST00000234526.2|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3	ENSMUST00000234834.2|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3
mm39_v1_chr10_-_10958031_10958116	7.44823	UGUGCUU	ENSMUST00000105561.9|Grm1|ENSMUSG00000019828.14|glutamate receptor, metabotropic 1	ENSMUST00000044306.13|Grm1|ENSMUSG00000019828.14|glutamate receptor, metabotropic 1
mm39_v1_chr8_+_94537460_94537471	7.39803	UGUGCUU	ENSMUST00000034198.15|Gnao1|ENSMUSG00000031748.17|guanine nucleotide binding protein, alpha O	ENSMUST00000125716.8|Gnao1|ENSMUSG00000031748.17|guanine nucleotide binding protein, alpha O
mm39_v1_chr10_+_89580849_89580884	7.36714	UGUGCUU	ENSMUST00000020112.7|Uhrf1bp1l|ENSMUSG00000019951.11|UHRF1 (ICBP90) binding protein 1-like
mm39_v1_chr19_-_7460600_7460651	7.22091	UGUGCUU	ENSMUST00000235593.2|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000088171.12|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000065304.13|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000025667.14|Rtn3|ENSMUSG00000024758.16|reticulon 3
mm39_v1_chr3_+_98289755_98289836	7.15685	UGUGCUU	ENSMUST00000056096.15|Zfp697|ENSMUSG00000050064.15|zinc finger protein 697
mm39_v1_chr1_+_132226308_132226370	7.1491	UGUGCUU	ENSMUST00000046071.5|Klhdc8a|ENSMUSG00000042115.5|kelch domain containing 8A
mm39_v1_chr12_-_75224099_75224133	7.01542	UGUGCUU	ENSMUST00000042299.4|Kcnh5|ENSMUSG00000034402.4|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm39_v1_chr18_-_77652820_77652858	6.99119	UGUGCUU	ENSMUST00000026494.14|Rnf165|ENSMUSG00000025427.16|ring finger protein 165	ENSMUST00000182024.2|Rnf165|ENSMUSG00000025427.16|ring finger protein 165
mm39_v1_chr18_-_38345010_38345106	6.96579	UGUGCUU	ENSMUST00000159405.3|Pcdh1|ENSMUSG00000051375.16|protocadherin 1	ENSMUST00000160721.8|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr12_+_3415143_3415207	6.9429	UGUGCUU	ENSMUST00000020999.7|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr3_+_96503944_96503979	6.93697	UGUGCUU	ENSMUST00000058943.8|Ankrd34a|ENSMUSG00000049097.10|ankyrin repeat domain 34A
mm39_v1_chr4_-_22488296_22488366	6.7824	UGUGCUU	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr14_-_80008745_80008758	6.76168	UGUGCUU	ENSMUST00000039568.11|Pcdh8|ENSMUSG00000036422.11|protocadherin 8	ENSMUST00000195355.2|Pcdh8|ENSMUSG00000036422.11|protocadherin 8
mm39_v1_chr9_-_52590686_52590737	6.73337	UGUGCUU	ENSMUST00000098768.3|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442	ENSMUST00000213843.2|AI593442|ENSMUSG00000078307.4|expressed sequence AI593442
mm39_v1_chrX_-_36166529_36166557	6.71753	UGUGCUU	ENSMUST00000057093.8|Nkrf|ENSMUSG00000044149.8|NF-kappaB repressing factor
mm39_v1_chr9_-_58111589_58111612	6.71189	UGUGCUU	ENSMUST00000217578.2|Islr|ENSMUSG00000037206.16|immunoglobulin superfamily containing leucine-rich repeat	ENSMUST00000114144.9|Islr2|ENSMUSG00000051243.15|immunoglobulin superfamily containing leucine-rich repeat 2	ENSMUST00000214649.2|Islr2|ENSMUSG00000051243.15|immunoglobulin superfamily containing leucine-rich repeat 2
mm39_v1_chr11_-_85030761_85030864	6.53847	UGUGCUU	ENSMUST00000108075.9|Usp32|ENSMUSG00000000804.15|ubiquitin specific peptidase 32
mm39_v1_chr6_-_85310393_85310424	6.50123	UGUGCUU	ENSMUST00000059034.13|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000045846.12|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000113788.2|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5
mm39_v1_chr11_-_20781009_20781056	6.48706	UGUGCUU	ENSMUST00000047028.9|Lgalsl|ENSMUSG00000042363.15|lectin, galactoside binding-like
mm39_v1_chr12_+_84498196_84498292	6.48199	UGUGCUU	ENSMUST00000137170.3|Lin52|ENSMUSG00000085793.3|lin-52 homolog (C. elegans)
mm39_v1_chr7_-_121306476_121306685	6.48136	UGUGCUU	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr7_+_99184645_99184709	6.37461	UGUGCUU	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr12_+_84161095_84161165	6.36443	UGUGCUU	ENSMUST00000123491.8|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000046340.9|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000136159.2|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1
mm39_v1_chr7_+_99030621_99030781	6.29316	UGUGCUU	ENSMUST00000037528.10|Gdpd5|ENSMUSG00000035314.11|glycerophosphodiester phosphodiesterase domain containing 5
mm39_v1_chr12_-_72117865_72117899	6.09617	UGUGCUU	ENSMUST00000050649.6|Gpr135|ENSMUSG00000043398.6|G protein-coupled receptor 135
mm39_v1_chr11_+_19874354_19874375	5.96369	UGUGCUU	ENSMUST00000093299.13|Spred2|ENSMUSG00000045671.18|sprouty-related EVH1 domain containing 2
mm39_v1_chr3_+_28835425_28835493	5.57563	UGUGCUU	ENSMUST00000060500.9|Eif5a2|ENSMUSG00000050192.9|eukaryotic translation initiation factor 5A2
mm39_v1_chr4_+_57434247_57434369	5.53167	UGUGCUU	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chr9_-_66702750_66702804	5.47012	UGUGCUU	ENSMUST00000034934.15|Aph1b|ENSMUSG00000032375.16|aph1 homolog B, gamma secretase subunit
mm39_v1_chr11_-_54678433_54678531	5.44238	UGUGCUU	ENSMUST00000153209.8|Cdc42se2|ENSMUSG00000052298.13|CDC42 small effector 2	ENSMUST00000064104.13|Cdc42se2|ENSMUSG00000052298.13|CDC42 small effector 2
mm39_v1_chr13_+_20274708_20274803	5.37363	UGUGCUU	ENSMUST00000072519.7|Elmo1|ENSMUSG00000041112.18|engulfment and cell motility 1
mm39_v1_chr2_-_131871725_131871921	5.33538	UGUGCUU	ENSMUST00000028814.15|Rassf2|ENSMUSG00000027339.16|Ras association (RalGDS/AF-6) domain family member 2
mm39_v1_chr4_-_41503046_41503122	5.3281	UGUGCUU	ENSMUST00000054920.5|Myorg|ENSMUSG00000046312.5|myogenesis regulating glycosidase (putative)
mm39_v1_chr9_+_3532778_3532778	5.2784	UGUGCUU	ENSMUST00000115733.3|Gucy1a2|ENSMUSG00000041624.11|guanylate cyclase 1, soluble, alpha 2
mm39_v1_chr5_-_140634773_140634807	5.27097	UGUGCUU	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr12_-_107969853_107969872	5.26602	UGUGCUU	ENSMUST00000066060.11|Bcl11b|ENSMUSG00000048251.16|B cell leukemia/lymphoma 11B
mm39_v1_chr6_-_143892814_143892837	5.25665	UGUGCUU	ENSMUST00000124233.7|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000144289.4|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111748.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr11_+_97253221_97253377	5.24123	UGUGCUU	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr7_-_134539993_134540159	5.21728	UGUGCUU	ENSMUST00000171394.3|Insyn2a|ENSMUSG00000073805.6|inhibitory synaptic factor 2A
mm39_v1_chr8_-_100143029_100143103	5.18101	UGUGCUU	ENSMUST00000155527.8|Cdh8|ENSMUSG00000036510.18|cadherin 8	ENSMUST00000142129.8|Cdh8|ENSMUSG00000036510.18|cadherin 8	ENSMUST00000093249.11|Cdh8|ENSMUSG00000036510.18|cadherin 8	ENSMUST00000142475.3|Cdh8|ENSMUSG00000036510.18|cadherin 8	ENSMUST00000128860.8|Cdh8|ENSMUSG00000036510.18|cadherin 8
mm39_v1_chr1_-_52991993_52992013	5.14777	UGUGCUU	ENSMUST00000050567.11|1700019D03Rik|ENSMUSG00000043629.13|RIKEN cDNA 1700019D03 gene
mm39_v1_chr2_-_33777874_33777958	5.13491	UGUGCUU	ENSMUST00000041555.10|Mvb12b|ENSMUSG00000038740.10|multivesicular body subunit 12B
mm39_v1_chr3_-_36744269_36744319	5.12723	UGUGCUU	ENSMUST00000029271.5|Trpc3|ENSMUSG00000027716.14|transient receptor potential cation channel, subfamily C, member 3
mm39_v1_chr5_+_117271632_117271714	5.08914	UGUGCUU	ENSMUST00000179276.8|Taok3|ENSMUSG00000061288.14|TAO kinase 3	ENSMUST00000092889.12|Taok3|ENSMUSG00000061288.14|TAO kinase 3	ENSMUST00000145640.8|Taok3|ENSMUSG00000061288.14|TAO kinase 3
mm39_v1_chr4_-_117354249_117354274	5.05817	UGUGCUU	ENSMUST00000030439.15|Rnf220|ENSMUSG00000028677.20|ring finger protein 220
mm39_v1_chr14_-_55329734_55329781	4.93536	UGUGCUU	ENSMUST00000036328.9|Zfhx2|ENSMUSG00000040721.10|zinc finger homeobox 2
mm39_v1_chr11_-_6425877_6425917	4.92141	UGUGCUU	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr15_-_66158445_66158509	4.87805	UGUGCUU	ENSMUST00000070256.9|Kcnq3|ENSMUSG00000056258.10|potassium voltage-gated channel, subfamily Q, member 3
mm39_v1_chr3_+_114697710_114697747	4.828	UGUGCUU	ENSMUST00000081752.13|Olfm3|ENSMUSG00000027965.16|olfactomedin 3
mm39_v1_chrX_-_59224449_59224541	4.80848	UGUGCUU	ENSMUST00000063507.11|Mcf2|ENSMUSG00000031139.17|mcf.2 transforming sequence
mm39_v1_chr15_-_36794741_36794791	4.76844	UGUGCUU	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr19_+_23118545_23118627	4.73063	UGUGCUU	ENSMUST00000036884.3|Klf9|ENSMUSG00000033863.3|Kruppel-like factor 9
mm39_v1_chr1_-_176102840_176102875	4.65807	UGUGCUU	ENSMUST00000111166.2|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5	ENSMUST00000065967.14|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5
mm39_v1_chr2_+_49677688_49677740	4.64876	UGUGCUU	ENSMUST00000028103.13|Lypd6b|ENSMUSG00000026765.13|LY6/PLAUR domain containing 6B
mm39_v1_chr18_+_22478146_22478146	4.62951	UGUGCUU	ENSMUST00000120223.8|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3	ENSMUST00000097655.4|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3
mm39_v1_chr19_+_42078859_42078939	4.6161	UGUGCUU	ENSMUST00000235932.2|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha	ENSMUST00000066778.6|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha
mm39_v1_chr9_-_57375269_57375357	4.56038	UGUGCUU	ENSMUST00000215059.2|Scamp5|ENSMUSG00000040722.8|secretory carrier membrane protein 5	ENSMUST00000046587.8|Scamp5|ENSMUSG00000040722.8|secretory carrier membrane protein 5	ENSMUST00000214256.2|Scamp5|ENSMUSG00000040722.8|secretory carrier membrane protein 5
mm39_v1_chr12_-_27392356_27392573	4.52024	UGUGCUU	ENSMUST00000079063.7|Sox11|ENSMUSG00000063632.7|SRY (sex determining region Y)-box 11
mm39_v1_chr4_+_152358648_152358819	4.47071	UGUGCUU	ENSMUST00000105650.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153	ENSMUST00000105651.8|Gpr153|ENSMUSG00000042804.14|G protein-coupled receptor 153
mm39_v1_chr2_+_69727563_69727591	4.4683	UGUGCUU	ENSMUST00000055758.16|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3	ENSMUST00000112251.9|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3
mm39_v1_chr15_-_84739292_84739327	4.45828	UGUGCUU	ENSMUST00000016768.12|Phf21b|ENSMUSG00000016624.16|PHD finger protein 21B
mm39_v1_chr11_+_102175757_102175857	4.45602	UGUGCUU	ENSMUST00000036376.13|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2	ENSMUST00000100387.11|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2
mm39_v1_chr19_-_10282218_10282318	4.4247	UGUGCUU	ENSMUST00000039327.11|Dagla|ENSMUSG00000035735.11|diacylglycerol lipase, alpha
mm39_v1_chr17_+_64203017_64203059	4.41187	UGUGCUU	ENSMUST00000000129.14|Fer|ENSMUSG00000000127.16|fer (fms/fps related) protein kinase
mm39_v1_chr17_+_86475205_86475223	4.28402	UGUGCUU	ENSMUST00000097275.9|Prkce|ENSMUSG00000045038.15|protein kinase C, epsilon
mm39_v1_chr16_+_32882882_32882919	4.1942	UGUGCUU	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chrX_+_20714782_20714828	4.16098	UGUGCUU	ENSMUST00000001155.11|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000122312.8|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000120356.8|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000122850.2|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase
mm39_v1_chr10_-_94780695_94780724	4.13362	UGUGCUU	ENSMUST00000099337.5|Plxnc1|ENSMUSG00000074785.6|plexin C1
mm39_v1_chr16_+_55794244_55794255	4.12188	UGUGCUU	ENSMUST00000050248.9|Zbtb11|ENSMUSG00000022601.12|zinc finger and BTB domain containing 11
mm39_v1_chr8_-_107064615_107064640	4.09939	UGUGCUU	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr2_+_71042050_71042138	4.0395	UGUGCUU	ENSMUST00000112142.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112139.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112140.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112138.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2
mm39_v1_chr15_-_103248512_103248527	4.0071	UGUGCUU	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr7_-_44578834_44578942	4.00695	UGUGCUU	ENSMUST00000107857.11|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000167930.8|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000085399.13|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000166972.9|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit
mm39_v1_chr8_-_124242072_124242151	3.94282	UGUGCUU	ENSMUST00000177240.8|Dbndd1|ENSMUSG00000031970.17|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm39_v1_chr2_-_39080701_39080762	3.87916	UGUGCUU	ENSMUST00000142872.2|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion	ENSMUST00000038874.12|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion
mm39_v1_chr6_+_108760025_108760096	3.86653	UGUGCUU	ENSMUST00000032196.9|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr5_-_38842084_38842169	3.86615	UGUGCUU	ENSMUST00000057258.11|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000178760.2|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000179555.8|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000180214.8|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B
mm39_v1_chr10_-_78188153_78188294	3.8628	UGUGCUU	ENSMUST00000001240.12|Agpat3|ENSMUSG00000001211.16|1-acylglycerol-3-phosphate O-acyltransferase 3
mm39_v1_chrX_-_142716200_142716307	3.8026	UGUGCUU	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr12_-_5425682_5425705	3.8022	UGUGCUU	ENSMUST00000020958.9|Klhl29|ENSMUSG00000020627.11|kelch-like 29
mm39_v1_chr1_+_44159106_44159147	3.77666	UGUGCUU	ENSMUST00000114709.3|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing	ENSMUST00000129068.2|Bivm|ENSMUSG00000041684.12|basic, immunoglobulin-like variable motif containing
mm39_v1_chr16_+_72460029_72460077	3.76523	UGUGCUU	ENSMUST00000023600.8|Robo1|ENSMUSG00000022883.12|roundabout guidance receptor 1
mm39_v1_chr11_+_29323618_29323777	3.75091	UGUGCUU	ENSMUST00000040182.13|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A	ENSMUST00000109477.2|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A
mm39_v1_chr19_-_58443830_58443889	3.65846	UGUGCUU	ENSMUST00000026076.14|Gfra1|ENSMUSG00000025089.16|glial cell line derived neurotrophic factor family receptor alpha 1
mm39_v1_chr17_+_50816296_50816431	3.62047	UGUGCUU	ENSMUST00000043938.8|Plcl2|ENSMUSG00000038910.8|phospholipase C-like 2
mm39_v1_chr1_-_182169150_182169190	3.56628	UGUGCUU	ENSMUST00000051431.10|Fbxo28|ENSMUSG00000047539.10|F-box protein 28
mm39_v1_chr5_+_48140480_48140504	3.5393	UGUGCUU	ENSMUST00000173107.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174313.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174421.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000170109.9|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2
mm39_v1_chr3_-_97796001_97796135	3.52082	UGUGCUU	ENSMUST00000168438.9|Pde4dip|ENSMUSG00000038170.16|phosphodiesterase 4D interacting protein (myomegalin)	ENSMUST00000090750.12|Pde4dip|ENSMUSG00000038170.16|phosphodiesterase 4D interacting protein (myomegalin)
mm39_v1_chrX_+_7688528_7688528	3.50799	UGUGCUU	ENSMUST00000009875.5|Kcnd1|ENSMUSG00000009731.5|potassium voltage-gated channel, Shal-related family, member 1
mm39_v1_chr1_-_9369463_9369531	3.46241	UGUGCUU	ENSMUST00000140295.8|Sntg1|ENSMUSG00000025909.17|syntrophin, gamma 1
mm39_v1_chr4_+_28813125_28813139	3.42351	UGUGCUU	ENSMUST00000080934.11|Epha7|ENSMUSG00000028289.13|Eph receptor A7	ENSMUST00000029964.12|Epha7|ENSMUSG00000028289.13|Eph receptor A7
mm39_v1_chr6_+_149310471_149310593	3.3456	UGUGCUU	ENSMUST00000086829.11|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1	ENSMUST00000111513.9|Bicd1|ENSMUSG00000003452.16|BICD cargo adaptor 1
mm39_v1_chr12_-_98867431_98867534	3.29682	UGUGCUU	ENSMUST00000065716.8|Eml5|ENSMUSG00000051166.11|echinoderm microtubule associated protein like 5
mm39_v1_chr10_-_77254041_77254111	3.2568	UGUGCUU	ENSMUST00000020496.14|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1	ENSMUST00000098374.9|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1	ENSMUST00000105406.8|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1
mm39_v1_chr11_-_86884507_86884538	3.25422	UGUGCUU	ENSMUST00000018571.5|Ypel2|ENSMUSG00000018427.9|yippee like 2
mm39_v1_chr14_-_26390986_26391038	3.23188	UGUGCUU	ENSMUST00000052932.10|Pde12|ENSMUSG00000043702.10|phosphodiesterase 12
mm39_v1_chr19_+_36532061_36532115	3.18505	UGUGCUU	ENSMUST00000169036.9|Hectd2|ENSMUSG00000041180.14|HECT domain E3 ubiquitin protein ligase 2	ENSMUST00000047247.12|Hectd2|ENSMUSG00000041180.14|HECT domain E3 ubiquitin protein ligase 2
mm39_v1_chr1_-_131455039_131455123	3.16174	UGUGCUU	ENSMUST00000097588.9|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2	ENSMUST00000186543.7|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2
mm39_v1_chr18_+_69478790_69478882	3.1022	UGUGCUU	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr2_+_130748380_130748421	3.03053	UGUGCUU	ENSMUST00000028781.9|Atrn|ENSMUSG00000027312.15|attractin
mm39_v1_chr4_+_155575792_155575877	2.99374	UGUGCUU	ENSMUST00000165335.8|Gnb1|ENSMUSG00000029064.16|guanine nucleotide binding protein (G protein), beta 1	ENSMUST00000105616.10|Gnb1|ENSMUSG00000029064.16|guanine nucleotide binding protein (G protein), beta 1	ENSMUST00000030940.14|Gnb1|ENSMUSG00000029064.16|guanine nucleotide binding protein (G protein), beta 1
mm39_v1_chr7_+_100256617_100256815	2.9593	UGUGCUU	ENSMUST00000107048.8|Rab6a|ENSMUSG00000030704.15|RAB6A, member RAS oncogene family	ENSMUST00000032946.10|Rab6a|ENSMUSG00000030704.15|RAB6A, member RAS oncogene family
mm39_v1_chr1_-_58625431_58625482	2.93987	UGUGCUU	ENSMUST00000161000.2|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B	ENSMUST00000161600.8|Fam126b|ENSMUSG00000038174.15|family with sequence similarity 126, member B
mm39_v1_chr10_+_115854118_115854328	2.90598	UGUGCUU	ENSMUST00000063470.11|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr2_-_140513382_140513399	2.87861	UGUGCUU	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chrX_-_6085069_6085069	2.87289	UGUGCUU	ENSMUST00000103006.4|Nudt10|ENSMUSG00000073293.5|nudix (nucleoside diphosphate linked moiety X)-type motif 10
mm39_v1_chr3_-_104960437_104960467	2.8663	UGUGCUU	ENSMUST00000077548.12|Cttnbp2nl|ENSMUSG00000062127.12|CTTNBP2 N-terminal like
mm39_v1_chr11_+_34264757_34264822	2.81491	UGUGCUU	ENSMUST00000165963.9|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B	ENSMUST00000093192.4|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B
mm39_v1_chr9_-_121534025_121534107	2.74937	UGUGCUU	ENSMUST00000078547.12|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein	ENSMUST00000111560.10|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein
mm39_v1_chrX_-_103024847_103024893	2.72501	UGUGCUU	ENSMUST00000121153.8|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting	ENSMUST00000070705.6|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting
mm39_v1_chr3_-_89067462_89067521	2.7095	UGUGCUU	ENSMUST00000029686.4|Hcn3|ENSMUSG00000028051.11|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm39_v1_chr4_+_101276474_101276547	2.68538	UGUGCUU	ENSMUST00000102780.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106946.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106945.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4
mm39_v1_chr7_-_99770653_99770772	2.6727	UGUGCUU	ENSMUST00000208670.2|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit	ENSMUST00000032969.14|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit
mm39_v1_chr13_+_92747586_92747624	2.62259	UGUGCUU	ENSMUST00000049488.9|Serinc5|ENSMUSG00000021703.10|serine incorporator 5
mm39_v1_chrX_+_71006577_71006619	2.59758	UGUGCUU	ENSMUST00000048790.7|Prrg3|ENSMUSG00000033361.14|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm39_v1_chr1_+_89382491_89382643	2.58874	UGUGCUU	ENSMUST00000027521.15|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	ENSMUST00000190096.7|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm39_v1_chr10_-_26249952_26250084	2.58656	UGUGCUU	ENSMUST00000105519.10|L3mbtl3|ENSMUSG00000039089.16|L3MBTL3 histone methyl-lysine binding protein	ENSMUST00000040219.13|L3mbtl3|ENSMUSG00000039089.16|L3MBTL3 histone methyl-lysine binding protein
mm39_v1_chr14_-_122703089_122703089	2.52221	UGUGCUU	ENSMUST00000039118.7|Zic5|ENSMUSG00000041703.8|zinc finger protein of the cerebellum 5
mm39_v1_chr2_-_130681978_130682070	2.48086	UGUGCUU	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr11_+_105069591_105069633	2.47669	UGUGCUU	ENSMUST00000106939.9|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)
mm39_v1_chr9_-_70564403_70564470	2.40574	UGUGCUU	ENSMUST00000213380.2|Mindy2|ENSMUSG00000042444.11|MINDY lysine 48 deubiquitinase 2	ENSMUST00000049031.6|Mindy2|ENSMUSG00000042444.11|MINDY lysine 48 deubiquitinase 2
mm39_v1_chr6_-_32565127_32565148	2.39147	UGUGCUU	ENSMUST00000115096.4|Plxna4|ENSMUSG00000029765.13|plexin A4
mm39_v1_chr1_+_166828982_166828999	2.37231	UGUGCUU	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr9_-_66741998_66742008	2.31971	UGUGCUU	ENSMUST00000169282.8|Aph1c|ENSMUSG00000053040.14|aph1 homolog C, gamma secretase subunit
mm39_v1_chr2_-_25982160_25982189	2.28552	UGUGCUU	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr15_-_76406602_76406699	2.27755	UGUGCUU	ENSMUST00000096365.5|Scrt1|ENSMUSG00000048385.10|scratch family zinc finger 1
mm39_v1_chr9_+_4309799_4309859	2.26687	UGUGCUU	ENSMUST00000049648.9|Kbtbd3|ENSMUSG00000025893.9|kelch repeat and BTB (POZ) domain containing 3	ENSMUST00000212221.2|Kbtbd3|ENSMUSG00000025893.9|kelch repeat and BTB (POZ) domain containing 3
mm39_v1_chrX_-_23231245_23231329	2.26518	UGUGCUU	ENSMUST00000115313.8|Klhl13|ENSMUSG00000036782.14|kelch-like 13
mm39_v1_chr2_+_30306116_30306154	2.23439	UGUGCUU	ENSMUST00000113601.10|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator	ENSMUST00000113603.10|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator
mm39_v1_chr4_+_21776261_21776297	2.19934	UGUGCUU	ENSMUST00000065111.15|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000040429.12|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000148304.8|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45
mm39_v1_chrX_-_112095181_112095219	2.1979	UGUGCUU	ENSMUST00000026607.15|Chm|ENSMUSG00000025531.15|choroidermia (RAB escort protein 1)	ENSMUST00000113388.3|Chm|ENSMUSG00000025531.15|choroidermia (RAB escort protein 1)
mm39_v1_chr12_-_87247082_87247228	2.18176	UGUGCUU	ENSMUST00000037418.7|Tmed8|ENSMUSG00000034111.7|transmembrane p24 trafficking protein 8
mm39_v1_chr1_-_57011595_57011661	2.11108	UGUGCUU	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr2_-_166904902_166904967	2.10347	UGUGCUU	ENSMUST00000048988.14|Znfx1|ENSMUSG00000039501.15|zinc finger, NFX1-type containing 1
mm39_v1_chr8_-_25691380_25691465	2.02363	UGUGCUU	ENSMUST00000084512.11|Tacc1|ENSMUSG00000065954.12|transforming, acidic coiled-coil containing protein 1
mm39_v1_chr12_-_32111214_32111302	1.98005	UGUGCUU	ENSMUST00000003079.12|Prkar2b|ENSMUSG00000002997.16|protein kinase, cAMP dependent regulatory, type II beta	ENSMUST00000036497.16|Prkar2b|ENSMUSG00000002997.16|protein kinase, cAMP dependent regulatory, type II beta
mm39_v1_chr19_-_36034740_36034773	1.97743	UGUGCUU	ENSMUST00000164639.8|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7	ENSMUST00000166074.2|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7	ENSMUST00000099505.4|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7
mm39_v1_chr1_-_192717958_192718036	1.95198	UGUGCUU	ENSMUST00000016344.9|Syt14|ENSMUSG00000016200.15|synaptotagmin XIV
mm39_v1_chr6_-_38230890_38231089	1.92239	UGUGCUU	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr2_-_63014622_63014681	1.89954	UGUGCUU	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr9_+_74944896_74944983	1.89674	UGUGCUU	ENSMUST00000168166.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000169492.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000170308.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19
mm39_v1_chr2_-_165997551_165997589	1.88839	UGUGCUU	ENSMUST00000109249.9|Sulf2|ENSMUSG00000006800.15|sulfatase 2	ENSMUST00000146497.9|Sulf2|ENSMUSG00000006800.15|sulfatase 2
mm39_v1_chr18_+_37130860_37130933	1.84411	UGUGCUU	ENSMUST00000115659.6|Pcdha9|ENSMUSG00000103770.2|protocadherin alpha 9
mm39_v1_chr4_+_54947976_54948054	1.78949	UGUGCUU	ENSMUST00000098070.10|Zfp462|ENSMUSG00000060206.12|zinc finger protein 462
mm39_v1_chr10_+_27950809_27950870	1.76524	UGUGCUU	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr11_+_69792642_69792720	1.76491	UGUGCUU	ENSMUST00000177138.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000108617.10|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000177476.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000061837.11|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4
mm39_v1_chr2_-_34645241_34645268	1.71868	UGUGCUU	ENSMUST00000102800.9|Gapvd1|ENSMUSG00000026867.20|GTPase activating protein and VPS9 domains 1
mm39_v1_chr12_+_87490666_87490716	1.71638	UGUGCUU	ENSMUST00000161023.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160488.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000077462.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160880.2|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein
mm39_v1_chr19_-_7319157_7319195	1.71352	UGUGCUU	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr2_+_151384403_151384423	1.7085	UGUGCUU	ENSMUST00000044011.12|Fkbp1a|ENSMUSG00000032966.15|FK506 binding protein 1a
mm39_v1_chr10_-_8761777_8761821	1.65484	UGUGCUU	ENSMUST00000015449.6|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr4_-_126323291_126323349	1.63914	UGUGCUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr15_-_82796308_82796390	1.63446	UGUGCUU	ENSMUST00000109510.10|Tcf20|ENSMUSG00000041852.16|transcription factor 20	ENSMUST00000048966.7|Tcf20|ENSMUSG00000041852.16|transcription factor 20
mm39_v1_chr15_-_28025920_28025970	1.63254	UGUGCUU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr16_-_3690243_3690275	1.59578	UGUGCUU	ENSMUST00000090522.5|Zfp597|ENSMUSG00000039789.8|zinc finger protein 597
mm39_v1_chr5_+_43390513_43390580	1.59033	UGUGCUU	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr1_-_192538031_192538064	1.55874	UGUGCUU	ENSMUST00000155579.8|Sertad4|ENSMUSG00000016262.15|SERTA domain containing 4
mm39_v1_chrX_-_103244784_103244810	1.55261	UGUGCUU	ENSMUST00000118314.8|Nexmif|ENSMUSG00000046449.16|neurite extension and migration factor
mm39_v1_chr1_+_23801007_23801080	1.54984	UGUGCUU	ENSMUST00000063663.6|B3gat2|ENSMUSG00000026156.9|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm39_v1_chr4_+_13743424_13743478	1.54607	UGUGCUU	ENSMUST00000006761.10|Runx1t1|ENSMUSG00000006586.16|RUNX1 translocation partner 1
mm39_v1_chr19_+_59249316_59249333	1.51456	UGUGCUU	ENSMUST00000026084.5|Slc18a2|ENSMUSG00000025094.9|solute carrier family 18 (vesicular monoamine), member 2
mm39_v1_chr15_-_90563510_90563635	1.51424	UGUGCUU	ENSMUST00000014777.9|Cpne8|ENSMUSG00000052560.16|copine VIII	ENSMUST00000064391.12|Cpne8|ENSMUSG00000052560.16|copine VIII
mm39_v1_chr14_-_104760051_104760143	1.50268	UGUGCUU	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr11_-_51748450_51748511	1.49081	UGUGCUU	ENSMUST00000020655.14|Jade2|ENSMUSG00000020387.16|jade family PHD finger 2	ENSMUST00000109090.8|Jade2|ENSMUSG00000020387.16|jade family PHD finger 2
mm39_v1_chr9_-_16289527_16289527	1.43257	UGUGCUU	ENSMUST00000082170.6|Fat3|ENSMUSG00000074505.7|FAT atypical cadherin 3
mm39_v1_chr11_-_77380492_77380527	1.40529	UGUGCUU	ENSMUST00000037593.14|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b	ENSMUST00000092892.10|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b
mm39_v1_chr19_+_22425565_22425596	1.35558	UGUGCUU	ENSMUST00000037901.14|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr2_+_69553141_69553189	1.34532	UGUGCUU	ENSMUST00000090858.10|Ppig|ENSMUSG00000042133.17|peptidyl-prolyl isomerase G (cyclophilin G)
mm39_v1_chr4_-_94867300_94867344	1.32462	UGUGCUU	ENSMUST00000075872.4|Mysm1|ENSMUSG00000062627.10|myb-like, SWIRM and MPN domains 1
mm39_v1_chrX_-_73129195_73129296	1.32152	UGUGCUU	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chrX_+_152020744_152020838	1.31547	UGUGCUU	ENSMUST00000112574.9|Klf8|ENSMUSG00000041649.14|Kruppel-like factor 8
mm39_v1_chr14_+_30437556_30437600	1.28245	UGUGCUU	ENSMUST00000054230.12|Sfmbt1|ENSMUSG00000006527.17|Scm-like with four mbt domains 1
mm39_v1_chr2_+_76236870_76236936	1.23017	UGUGCUU	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr5_+_67417908_67418054	1.17835	UGUGCUU	ENSMUST00000037918.12|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000162543.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000161233.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000160352.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33
mm39_v1_chr1_+_63485002_63485102	1.15322	UGUGCUU	ENSMUST00000087374.10|Adam23|ENSMUSG00000025964.16|a disintegrin and metallopeptidase domain 23
mm39_v1_chr19_-_29625755_29625825	1.12493	UGUGCUU	ENSMUST00000159692.8|Ermp1|ENSMUSG00000046324.13|endoplasmic reticulum metallopeptidase 1
mm39_v1_chr11_+_59553296_59553369	1.07903	UGUGCUU	ENSMUST00000072031.13|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000066330.15|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000108751.8|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000116371.8|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein
mm39_v1_chr19_-_12773472_12773510	0.926984	UGUGCUU	ENSMUST00000038627.9|Zfp91|ENSMUSG00000024695.17|zinc finger protein 91
mm39_v1_chr6_+_142332941_142333017	0.914394	UGUGCUU	ENSMUST00000032372.7|Golt1b|ENSMUSG00000030245.11|golgi transport 1B
mm39_v1_chr9_+_59485475_59485620	0.904294	UGUGCUU	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr13_-_93636224_93636333	0.859599	UGUGCUU	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr8_+_27532583_27532616	0.856552	UGUGCUU	ENSMUST00000033875.10|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein	ENSMUST00000209525.2|Plpbp|ENSMUSG00000031485.16|pyridoxal phosphate binding protein
mm39_v1_chr6_-_24664959_24665039	0.776686	UGUGCUU	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr14_+_4230569_4230642	0.771894	UGUGCUU	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr1_+_156386414_156386619	0.754694	UGUGCUU	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr1_+_136059101_136059142	0.752769	UGUGCUU	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr6_-_128332789_128332819	0.748742	UGUGCUU	ENSMUST00000001562.9|Tulp3|ENSMUSG00000001521.13|tubby-like protein 3
mm39_v1_chrX_-_73009933_73009982	0.714064	UGUGCUU	ENSMUST00000114372.3|Hcfc1|ENSMUSG00000031386.15|host cell factor C1	ENSMUST00000033761.13|Hcfc1|ENSMUSG00000031386.15|host cell factor C1
mm39_v1_chr1_+_127701901_127701975	0.696401	UGUGCUU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr6_+_30401864_30401997	0.689349	UGUGCUU	ENSMUST00000068240.13|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000068259.10|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000132581.8|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10
mm39_v1_chr12_-_31684588_31684679	0.67681	UGUGCUU	ENSMUST00000020979.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29	ENSMUST00000177962.9|Bcap29|ENSMUSG00000020650.16|B cell receptor associated protein 29
mm39_v1_chrX_-_71962017_71962042	0.673387	UGUGCUU	ENSMUST00000114551.10|Cetn2|ENSMUSG00000031347.13|centrin 2
mm39_v1_chr5_+_73648368_73648452	0.668688	UGUGCUU	ENSMUST00000113558.8|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	ENSMUST00000063882.12|Dcun1d4|ENSMUSG00000051674.16|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm39_v1_chr4_-_70453140_70453224	0.626421	UGUGCUU	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr4_-_136684082_136684176	0.603176	UGUGCUU	ENSMUST00000030420.9|Epha8|ENSMUSG00000028661.9|Eph receptor A8
mm39_v1_chr10_+_3690348_3690432	0.594336	UGUGCUU	ENSMUST00000120274.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr5_-_22549688_22549708	0.545607	UGUGCUU	ENSMUST00000062372.14|Reln|ENSMUSG00000042453.15|reelin	ENSMUST00000161356.8|Reln|ENSMUSG00000042453.15|reelin
mm39_v1_chr1_+_64571942_64572013	0.545196	UGUGCUU	ENSMUST00000171164.8|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000187811.7|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000049932.12|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000087366.11|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr4_+_131600918_131600992	0.54413	UGUGCUU	ENSMUST00000053819.6|Srsf4|ENSMUSG00000028911.17|serine and arginine-rich splicing factor 4
mm39_v1_chr19_-_55087849_55087925	0.540804	UGUGCUU	ENSMUST00000061856.6|Gpam|ENSMUSG00000024978.12|glycerol-3-phosphate acyltransferase, mitochondrial
mm39_v1_chr11_-_23447866_23447962	0.532105	UGUGCUU	ENSMUST00000128559.2|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2	ENSMUST00000147157.8|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2	ENSMUST00000109539.8|Ahsa2|ENSMUSG00000020288.14|AHA1, activator of heat shock protein ATPase 2
mm39_v1_chr14_-_67309866_67309925	0.513091	UGUGCUU	ENSMUST00000225380.2|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha	ENSMUST00000089230.7|Ppp2r2a|ENSMUSG00000022052.10|protein phosphatase 2, regulatory subunit B, alpha
mm39_v1_chr9_-_48747232_48747262	0.456467	UGUGCUU	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr9_+_78020554_78020659	0.43624	UGUGCUU	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chrX_+_52001108_52001238	0.427734	UGUGCUU	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr17_-_52139693_52139706	0.421109	UGUGCUU	ENSMUST00000144331.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr3_-_31023547_31023573	0.412476	UGUGCUU	ENSMUST00000064718.12|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000177992.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000129817.9|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000168645.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000108255.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000099163.5|Phc3|ENSMUSG00000037652.16|polyhomeotic 3
mm39_v1_chr4_-_4793274_4793382	0.393928	UGUGCUU	ENSMUST00000084949.3|Bpnt2|ENSMUSG00000066324.3|3'(2'), 5'-bisphosphate nucleotidase 2
mm39_v1_chr5_-_4154681_4154802	0.378414	UGUGCUU	ENSMUST00000001507.5|Cyp51|ENSMUSG00000001467.6|cytochrome P450, family 51
mm39_v1_chr9_+_119723931_119723979	0.371366	UGUGCUU	ENSMUST00000036561.8|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000217472.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000215307.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48
mm39_v1_chr9_+_114517812_114517881	0.366318	UGUGCUU	ENSMUST00000047404.7|Dync1li1|ENSMUSG00000032435.10|dynein cytoplasmic 1 light intermediate chain 1
mm39_v1_chr19_+_53517528_53517545	0.366076	UGUGCUU	ENSMUST00000038287.7|Dusp5|ENSMUSG00000034765.7|dual specificity phosphatase 5
mm39_v1_chr6_-_148732946_148732992	0.35929	UGUGCUU	ENSMUST00000048418.14|Ipo8|ENSMUSG00000040029.16|importin 8
mm39_v1_chr18_-_62044871_62044925	0.358885	UGUGCUU	ENSMUST00000166783.3|Ablim3|ENSMUSG00000032735.16|actin binding LIM protein family, member 3	ENSMUST00000049378.15|Ablim3|ENSMUSG00000032735.16|actin binding LIM protein family, member 3
mm39_v1_chr16_+_51851588_51851705	0.356039	UGUGCUU	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr5_-_22755274_22755384	0.355397	UGUGCUU	ENSMUST00000030872.12|Orc5|ENSMUSG00000029012.12|origin recognition complex, subunit 5
mm39_v1_chr14_+_51162425_51162463	0.337336	UGUGCUU	ENSMUST00000049411.12|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000136753.8|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000154288.3|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1
mm39_v1_chr1_-_152778373_152778421	0.318863	UGUGCUU	ENSMUST00000073441.13|Smg7|ENSMUSG00000042772.16|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	ENSMUST00000111836.4|Smg7|ENSMUSG00000042772.16|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm39_v1_chr9_-_50920236_50920380	0.315813	UGUGCUU	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr11_-_120269517_120269605	0.278286	UGUGCUU	ENSMUST00000026448.10|Faap100|ENSMUSG00000025384.16|Fanconi anemia core complex associated protein 100
mm39_v1_chr5_+_77122530_77122575	0.261122	UGUGCUU	ENSMUST00000101087.10|Srp72|ENSMUSG00000036323.15|signal recognition particle 72	ENSMUST00000120550.2|Srp72|ENSMUSG00000036323.15|signal recognition particle 72
mm39_v1_chr2_+_167345009_167345144	0.251986	UGUGCUU	ENSMUST00000078050.7|Rnf114|ENSMUSG00000006418.18|ring finger protein 114
mm39_v1_chr8_+_34089597_34089684	0.238487	UGUGCUU	ENSMUST00000009774.11|Ppp2cb|ENSMUSG00000009630.11|protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
mm39_v1_chr17_-_83939316_83939335	0.221154	UGUGCUU	ENSMUST00000234613.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3	ENSMUST00000051482.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3
mm39_v1_chr6_+_71470833_71470902	0.203375	UGUGCUU	ENSMUST00000064637.11|Rnf103|ENSMUSG00000052656.13|ring finger protein 103	ENSMUST00000114178.8|Rnf103|ENSMUSG00000052656.13|ring finger protein 103
mm39_v1_chr14_-_4808744_4808823	0.161038	UGUGCUU	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr9_-_123680927_123680974	0.157859	UGUGCUU	ENSMUST00000184082.3|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1	ENSMUST00000167595.9|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1
mm39_v1_chr13_-_55684317_55684471	0.107455	UGUGCUU	ENSMUST00000021956.9|Ddx41|ENSMUSG00000021494.10|DEAD box helicase 41	ENSMUST00000224765.2|Ddx41|ENSMUSG00000021494.10|DEAD box helicase 41
mm39_v1_chr7_+_28455563_28455599	0.0720301	UGUGCUU	ENSMUST00000178767.3|Ccer2|ENSMUSG00000096257.3|coiled-coil glutamate-rich protein 2
mm39_v1_chr8_+_106581719_106581781	0.0638469	UGUGCUU	ENSMUST00000040445.9|Thap11|ENSMUSG00000036442.9|THAP domain containing 11
mm39_v1_chr2_+_181138958_181139009	0.0501057	UGUGCUU	ENSMUST00000149163.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000000844.15|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000184849.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000108800.8|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2	ENSMUST00000069712.9|Tpd52l2|ENSMUSG00000000827.19|tumor protein D52-like 2
mm39_v1_chr12_+_86288626_86288711	0.0382291	UGUGCUU	ENSMUST00000221368.2|Gpatch2l|ENSMUSG00000021254.10|G patch domain containing 2 like	ENSMUST00000071106.6|Gpatch2l|ENSMUSG00000021254.10|G patch domain containing 2 like
mm39_v1_chr16_-_21513317_21513415	0.00601976	UGUGCUU	ENSMUST00000231592.2|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene	ENSMUST00000053336.8|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene
