ISMARA results PRJNA438478: RNAseq of wild type zebrafish germline

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

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Motif name	Z-value	Associated genes
rfx3_rfx2+rfx4	15.64	rfx3 NCBI UniProt rfx2 NCBI UniProt rfx4 NCBI UniProt rfx4 NCBI UniProt
rfx7a+rfx7b	5.12	rfx7a NCBI UniProt rfx7b NCBI UniProt
etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3	4.19	etv5b NCBI UniProt etv5a NCBI UniProt etv5a NCBI UniProt etv5b NCBI UniProt elk1 NCBI UniProt elk4 NCBI UniProt etv1 NCBI UniProt elf1 NCBI UniProt erfl3 NCBI UniProt erf NCBI UniProt gabpa NCBI UniProt gabpa NCBI UniProt elk3 NCBI UniProt elk3 NCBI UniProt
elf2a+elf2b	3.53	elf2a NCBI UniProt elf2b NCBI UniProt elf2b NCBI UniProt
spi1a+spi1b	3.26	spi1b NCBI UniProt spi1a NCBI UniProt
snai1a	2.91	snai1a NCBI UniProt
bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1	2.83	bhlhe41 NCBI UniProt bhlhe41 NCBI UniProt bhlhe41 NCBI UniProt tfeb NCBI UniProt usf2 NCBI UniProt tfec NCBI UniProt max NCBI UniProt mntb NCBI UniProt mnta NCBI UniProt mitfa NCBI UniProt mitfb NCBI UniProt mlxipl NCBI UniProt usf1 NCBI UniProt usf1l NCBI UniProt usf1l NCBI UniProt usf1l NCBI UniProt mxi1 NCBI UniProt mxi1 NCBI UniProt srebf1 NCBI UniProt
BX548005.1+smarcc2	2.72	smarcc2 NCBI UniProt BX548005.1 NCBI UniProt
clocka+clockb+npas2	2.72	clockb NCBI UniProt clocka NCBI UniProt npas2 NCBI UniProt npas2 NCBI UniProt
esrrd+esrrga_esrrb_esrra+esrrgb	2.49	esrrga NCBI UniProt esrrd NCBI UniProt esrrb NCBI UniProt esrrgb NCBI UniProt esrra NCBI UniProt

Showing 1 to 10 of 475 entries

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Sample name	Condition	Replicate/Batch
oocyte1_rep1
oocyte1_rep2
oocyte2_rep1
oocyte2_rep2
oocyte3_rep1
oocyte3_rep2
ovary1_rep1
ovary1_rep2
ovary2_rep1
ovary2_rep2
ovary3_rep1
ovary3_rep2
testis1_rep1
testis1_rep2
testis2_rep1
testis2_rep2
testis3_rep1
testis3_rep2

Showing 1 to 18 of 18 entries