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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for arid5b

Z-value: 0.56

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Transcription factors associated with arid5b

Gene Symbol Gene ID Gene Info
arid5b
ENSDARG00000037196 AT-rich interaction domain 5B

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
arid5bdr11_v1_chr12_+_8373525_8373525-0.873.3e-06Click!

Activity profile of arid5b motif

Sorted Z-values of arid5b motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr21_-_2322102 1.87 ENSDART00000162867
zgc:66483
zgc:66483
chr17_-_2578026 1.63 ENSDART00000065821
zp3.2
zona pellucida glycoprotein 3, tandem duplicate 2
chr5_-_72390259 1.45 ENSDART00000172302
wbp1
WW domain binding protein 1
chr2_-_17114852 1.44 ENSDART00000006549
pif1
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
chr18_-_16953978 1.32 ENSDART00000100126
akip1
A kinase (PRKA) interacting protein 1
chr17_-_2584423 1.32 ENSDART00000013506
zp3.2
zona pellucida glycoprotein 3, tandem duplicate 2
chr13_-_6252498 1.14 ENSDART00000115157
tuba4l
tubulin, alpha 4 like
chr12_+_31783066 1.01 ENSDART00000105584
lrrc59
leucine rich repeat containing 59
chr25_-_17918536 0.95 ENSDART00000148660
arntl1a
aryl hydrocarbon receptor nuclear translocator-like 1a
chr5_-_1218801 0.93 ENSDART00000184398
CABZ01048143.1

chr12_+_46841918 0.91 ENSDART00000157464
adkb
adenosine kinase b
chr14_+_8940326 0.89 ENSDART00000159920
rps6kal
ribosomal protein S6 kinase a, like
chr15_-_37589600 0.83 ENSDART00000154641
proser3
proline and serine rich 3
chr15_-_1036878 0.81 ENSDART00000123844
si:dkey-77f5.3
si:dkey-77f5.3
chr10_-_244745 0.80 ENSDART00000136551
klhl35
kelch-like family member 35
chr9_+_2020667 0.76 ENSDART00000157818
lnpa
limb and neural patterns a
chr18_+_27439680 0.75 ENSDART00000014726
tp53i11b
tumor protein p53 inducible protein 11b
chr20_+_33924235 0.70 ENSDART00000146292
ENSDART00000139609
lmx1a
LIM homeobox transcription factor 1, alpha
chr15_-_5624361 0.70 ENSDART00000176446
ENSDART00000114410
wdr62
WD repeat domain 62
chr8_+_36500061 0.67 ENSDART00000185840
slc7a4
solute carrier family 7, member 4
chr23_-_24542156 0.66 ENSDART00000132265
atp13a2
ATPase 13A2
chr21_+_43172506 0.62 ENSDART00000121725
zcchc10
zinc finger, CCHC domain containing 10
chr25_+_33063762 0.62 ENSDART00000189974
tln2b
talin 2b
chr8_+_36500308 0.60 ENSDART00000098701
slc7a4
solute carrier family 7, member 4
chr25_-_32363341 0.59 ENSDART00000153892
ENSDART00000114385
cep152
centrosomal protein 152
chr23_+_36730713 0.59 ENSDART00000113179
tspan31
tetraspanin 31
chr3_+_23047241 0.58 ENSDART00000103858
b4galnt2.2
beta-1,4-N-acetyl-galactosaminyl transferase 2, tandem duplicate 2
chr2_-_37684641 0.58 ENSDART00000012191
hiat1a
hippocampus abundant transcript 1a
chr2_+_42871831 0.57 ENSDART00000171393
efr3a
EFR3 homolog A (S. cerevisiae)
chr6_-_6254432 0.54 ENSDART00000081952
rtn4a
reticulon 4a
chr25_+_20694177 0.53 ENSDART00000073648
kxd1
KxDL motif containing 1
chr2_-_3077027 0.53 ENSDART00000109319
arf1
ADP-ribosylation factor 1
chr7_+_22792132 0.52 ENSDART00000135207
ENSDART00000146801
rbm4.3
RNA binding motif protein 4.3
chr13_-_30150592 0.51 ENSDART00000143093
sar1ab
secretion associated, Ras related GTPase 1Ab
chr9_+_14023386 0.45 ENSDART00000140199
ENSDART00000124267
si:ch211-67e16.4
si:ch211-67e16.4
chr13_-_30149973 0.45 ENSDART00000041515
sar1ab
secretion associated, Ras related GTPase 1Ab
chr16_+_53387085 0.44 ENSDART00000154223
ENSDART00000101404
kif13a
kinesin family member 13A
chr15_+_21711671 0.43 ENSDART00000136151
NKAPD1
zgc:162339
chr18_+_7543347 0.43 ENSDART00000103467
arf5
ADP-ribosylation factor 5
chr25_-_2355107 0.43 ENSDART00000056121
mrps35
mitochondrial ribosomal protein S35
chr25_+_17244532 0.43 ENSDART00000050379
ENSDART00000171322
kdm7ab
lysine (K)-specific demethylase 7Ab
chr16_-_27224000 0.42 ENSDART00000126347
alg2
asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
chr19_-_10330778 0.41 ENSDART00000081465
ENSDART00000136653
ENSDART00000171232
ccdc106b
coiled-coil domain containing 106b
chr23_-_29505645 0.40 ENSDART00000146458
kif1b
kinesin family member 1B
chr14_-_21238046 0.40 ENSDART00000129743
si:ch211-175m2.5
si:ch211-175m2.5
chr10_+_35275965 0.39 ENSDART00000077404
pora
P450 (cytochrome) oxidoreductase a
chr5_+_64277604 0.39 ENSDART00000111282
qsox2
quiescin Q6 sulfhydryl oxidase 2
chr15_-_1485086 0.39 ENSDART00000191651
si:dkeyp-97b10.3
si:dkeyp-97b10.3
chr22_-_19102256 0.39 ENSDART00000171866
ENSDART00000166295
polrmt
polymerase (RNA) mitochondrial (DNA directed)
chr10_+_2876378 0.38 ENSDART00000192083
ccar2
cell cycle and apoptosis regulator 2
chr21_-_11970199 0.37 ENSDART00000114524
nop56
NOP56 ribonucleoprotein homolog
chr16_-_27677930 0.36 ENSDART00000145991
tbrg4
transforming growth factor beta regulator 4
chr9_-_2892045 0.36 ENSDART00000137201
cdca7a
cell division cycle associated 7a
chr21_-_1625976 0.36 ENSDART00000066621
vmo1b
vitelline membrane outer layer 1 homolog b
chr17_-_7028418 0.36 ENSDART00000188305
ENSDART00000187895
sash1b
SAM and SH3 domain containing 1b
chr23_-_27589754 0.35 ENSDART00000138381
ENSDART00000133721
si:ch211-156j22.4
si:ch211-156j22.4
chr2_-_37744951 0.35 ENSDART00000144807
myo9b
myosin IXb
chr10_+_2876020 0.33 ENSDART00000136618
ENSDART00000133128
ENSDART00000140803
ENSDART00000141505
ccar2
cell cycle and apoptosis regulator 2
chr10_-_18463934 0.33 ENSDART00000133116
ENSDART00000113422
si:dkey-28o19.1
si:dkey-28o19.1
chr6_-_9646275 0.32 ENSDART00000012903
wdr12
WD repeat domain 12
chr15_-_1484795 0.32 ENSDART00000129356
si:dkeyp-97b10.3
si:dkeyp-97b10.3
chr8_+_47342586 0.31 ENSDART00000007624
plch2a
phospholipase C, eta 2a
chr12_+_19976400 0.31 ENSDART00000153177
mkl2a
MKL/myocardin-like 2a
chr8_+_16738282 0.30 ENSDART00000134265
ENSDART00000100698
ercc8
excision repair cross-complementation group 8
chr9_-_2892250 0.30 ENSDART00000140695
cdca7a
cell division cycle associated 7a
chr17_+_10578823 0.30 ENSDART00000134610
mgaa
MGA, MAX dimerization protein a
chr24_+_39638555 0.29 ENSDART00000078313
luc7l
LUC7-like (S. cerevisiae)
chr5_+_30596477 0.28 ENSDART00000124487
hinfp
histone H4 transcription factor
chr7_+_13491452 0.28 ENSDART00000053535
arih1l
ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like
chr11_-_18017918 0.26 ENSDART00000040171
qrich1
glutamine-rich 1
chr18_+_36782930 0.26 ENSDART00000004129
si:ch211-160d20.3
si:ch211-160d20.3
chr2_+_2967255 0.25 ENSDART00000167649
ENSDART00000166449
pik3r3a
phosphoinositide-3-kinase, regulatory subunit 3a (gamma)
chr5_-_72178739 0.25 ENSDART00000050971
rab14l
RAB14, member RAS oncogene family, like
chr5_+_30596632 0.24 ENSDART00000051414
hinfp
histone H4 transcription factor
chr17_+_28611746 0.23 ENSDART00000156711
ENSDART00000113300
mis18bp1
MIS18 binding protein 1
chr19_-_45650994 0.23 ENSDART00000163504
trps1
trichorhinophalangeal syndrome I
chr2_+_31806602 0.23 ENSDART00000086608
ranbp9
RAN binding protein 9
chr24_+_30392834 0.23 ENSDART00000162555
dpyda.1
dihydropyrimidine dehydrogenase a, tandem duplicate 1
chr13_-_31166544 0.21 ENSDART00000146250
ENSDART00000132129
ENSDART00000139591
mapk8a
mitogen-activated protein kinase 8a
chr15_+_24572926 0.21 ENSDART00000155636
ENSDART00000187800
dhrs13b
dehydrogenase/reductase (SDR family) member 13b
chr10_-_29101715 0.21 ENSDART00000149674
ENSDART00000171194
ENSDART00000192019
si:ch211-103f14.3
si:ch211-103f14.3
chr5_+_33488860 0.21 ENSDART00000135571
si:dkey-238j22.1
si:dkey-238j22.1
chr19_+_30884706 0.21 ENSDART00000052126
yars
tyrosyl-tRNA synthetase
chr14_-_8940499 0.21 ENSDART00000129030
zgc:153681
zgc:153681
chr14_+_20351 0.20 ENSDART00000051893
stx18
syntaxin 18
chr16_-_42303856 0.19 ENSDART00000180030
ppox
protoporphyrinogen oxidase
chr23_+_45734011 0.19 ENSDART00000062415
CABZ01088025.1

chr6_-_49063085 0.19 ENSDART00000156124
si:ch211-105j21.9
si:ch211-105j21.9
chr21_-_38581903 0.18 ENSDART00000148939
pof1b
POF1B, actin binding protein
chr22_-_22242884 0.18 ENSDART00000020937
hdgfl2
HDGF like 2
chr12_-_25097520 0.18 ENSDART00000158036
cript
cysteine-rich PDZ-binding protein
chr18_+_3052408 0.16 ENSDART00000181563
kctd14
potassium channel tetramerization domain containing 14
chr23_+_3513201 0.16 ENSDART00000092258
spata2
spermatogenesis associated 2
chr16_+_27224068 0.16 ENSDART00000059013
sec61b
Sec61 translocon beta subunit
chr2_-_50126337 0.13 ENSDART00000009347
exoc3
exocyst complex component 3
chr11_+_7183025 0.13 ENSDART00000046670
ENSDART00000154009
ENSDART00000156974
ENSDART00000125619
thop1
thimet oligopeptidase 1
chr21_-_38582061 0.13 ENSDART00000193891
ENSDART00000124349
pof1b
POF1B, actin binding protein
chr7_+_17716601 0.13 ENSDART00000173792
ENSDART00000080825
rtn3
reticulon 3
chr11_+_1551603 0.12 ENSDART00000185383
ENSDART00000121489
ENSDART00000040577
mybl2b
v-myb avian myeloblastosis viral oncogene homolog-like 2b
chr7_-_60831082 0.11 ENSDART00000073654
ENSDART00000136999
pcxb
pyruvate carboxylase b
chr7_-_52709759 0.11 ENSDART00000136745
ENSDART00000131282
ENSDART00000073766
ENSDART00000161387
ENSDART00000174117
ENSDART00000174355
tcf12
transcription factor 12
chr3_-_34100700 0.11 ENSDART00000151628
ighv6-1
immunoglobulin heavy variable 6-1
chr19_-_32042105 0.10 ENSDART00000088358
znf704
zinc finger protein 704
chr10_-_25657506 0.10 ENSDART00000110751
tiam1a
T cell lymphoma invasion and metastasis 1a
chr12_+_48683208 0.10 ENSDART00000188582
mmp21
matrix metallopeptidase 21
chr21_+_41839443 0.09 ENSDART00000010942
rnf14
ring finger protein 14
chr23_-_27589508 0.09 ENSDART00000178404
si:ch211-156j22.4
si:ch211-156j22.4
chr15_-_31390760 0.08 ENSDART00000190774
or111-6
odorant receptor, family D, subfamily 111, member 6
chr1_+_58602506 0.08 ENSDART00000158425
si:ch73-221f6.1
si:ch73-221f6.1
chr4_-_32458542 0.08 ENSDART00000127211
si:dkey-16p6.1
si:dkey-16p6.1
chr2_+_7295515 0.08 ENSDART00000152987
si:dkeyp-106c3.1
si:dkeyp-106c3.1
chr16_+_13818500 0.07 ENSDART00000135245
flcn
folliculin
chr4_-_68868229 0.07 ENSDART00000159219
si:dkey-264f17.5
si:dkey-264f17.5
chr23_+_20523617 0.07 ENSDART00000176404
adnpb
activity-dependent neuroprotector homeobox b
chr21_+_3021702 0.07 ENSDART00000188235
CABZ01023247.1

chr19_-_21832441 0.06 ENSDART00000151272
ENSDART00000151442
ENSDART00000150168
ENSDART00000148797
ENSDART00000128196
ENSDART00000149259
ENSDART00000052556
ENSDART00000149658
ENSDART00000149639
ENSDART00000148424
mbpa
myelin basic protein a
chr17_+_51224421 0.06 ENSDART00000025229
adi1
acireductone dioxygenase 1
chr23_+_44665230 0.06 ENSDART00000144958
camta2
calmodulin binding transcription activator 2
chr24_-_7728409 0.06 ENSDART00000131392
ptprh
protein tyrosine phosphatase, receptor type, h
chr11_-_23322182 0.06 ENSDART00000111289
kiss1
KiSS-1 metastasis-suppressor
chr4_+_54618332 0.05 ENSDART00000171824
si:ch211-227e10.2
si:ch211-227e10.2
chr13_-_4704353 0.05 ENSDART00000171900
oit3
oncoprotein induced transcript 3
chr16_-_25606235 0.05 ENSDART00000192741
zgc:110410
zgc:110410
chr20_-_49657134 0.05 ENSDART00000151248
col12a1b
collagen, type XII, alpha 1b
chr10_-_28193642 0.05 ENSDART00000019050
rps6kb1a
ribosomal protein S6 kinase b, polypeptide 1a
chr19_-_19379084 0.05 ENSDART00000165206
smarcc1b
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b
chr13_+_18523661 0.05 ENSDART00000034852
tlr4bb
toll-like receptor 4b, duplicate b
chr9_-_29985390 0.05 ENSDART00000134157
il1rapl1a
interleukin 1 receptor accessory protein-like 1a
chr3_-_4303262 0.04 ENSDART00000112819
si:dkey-73p2.2
si:dkey-73p2.2
chr11_+_13224281 0.04 ENSDART00000102557
ENSDART00000178706
abcb11b
ATP-binding cassette, sub-family B (MDR/TAP), member 11b
chr4_-_71151245 0.04 ENSDART00000165415
si:dkey-193i10.4
si:dkey-193i10.4
chr4_-_76205022 0.04 ENSDART00000159687
ENSDART00000187593
si:ch211-106j21.5
si:ch211-106j21.5
chr16_+_14033121 0.04 ENSDART00000135844
rusc1
RUN and SH3 domain containing 1
chr1_+_37195465 0.04 ENSDART00000043855
ENSDART00000192580
ENSDART00000181666
dclk2a
doublecortin-like kinase 2a
chr1_+_37195919 0.04 ENSDART00000159684
ENSDART00000172742
ENSDART00000158395
dclk2a
doublecortin-like kinase 2a
chr10_+_40774215 0.03 ENSDART00000131493
taar19b
trace amine associated receptor 19b
chr8_+_8973425 0.03 ENSDART00000066107
bcap31
B cell receptor associated protein 31
chr4_+_53119675 0.03 ENSDART00000167470
si:dkey-8o9.2
si:dkey-8o9.2
chr4_+_49196098 0.03 ENSDART00000150678
si:dkey-40n15.1
si:dkey-40n15.1
chr10_+_8481660 0.03 ENSDART00000109559
BX682234.1

chr1_+_58066109 0.02 ENSDART00000115190
si:ch211-114l13.4
si:ch211-114l13.4
chr8_-_49201258 0.02 ENSDART00000114584
ENSDART00000142172
zgc:171501
zgc:171501
chr11_-_36474306 0.02 ENSDART00000170678
ENSDART00000123591
usp48
ubiquitin specific peptidase 48
chr23_-_15878879 0.02 ENSDART00000010119
eef1a2
eukaryotic translation elongation factor 1 alpha 2
chr17_-_50022827 0.02 ENSDART00000161008
filip1a
filamin A interacting protein 1a
chr2_+_54827391 0.01 ENSDART00000167269
twsg1a
twisted gastrulation BMP signaling modulator 1a
chr19_+_9666961 0.01 ENSDART00000104596
ENSDART00000132124
si:dkey-14o18.6
si:dkey-14o18.6
chr6_+_58406014 0.01 ENSDART00000044241
kcnq2b
potassium voltage-gated channel, KQT-like subfamily, member 2b
chr12_+_34127573 0.01 ENSDART00000153413
cyth1b
cytohesin 1b
chr11_+_21137948 0.01 ENSDART00000110673
il10
interleukin 10
chr22_+_19478140 0.01 ENSDART00000135291
ENSDART00000136576
si:dkey-78l4.8
si:dkey-78l4.8
chr3_-_28828242 0.01 ENSDART00000151445
si:ch211-76l23.4
si:ch211-76l23.4
chr4_+_57099307 0.00 ENSDART00000131654
si:ch211-238e22.2
si:ch211-238e22.2
chr24_-_6644734 0.00 ENSDART00000167391
arhgap21a
Rho GTPase activating protein 21a
chr6_-_50204262 0.00 ENSDART00000163648
raly
RALY heterogeneous nuclear ribonucleoprotein
chr25_+_35133404 0.00 ENSDART00000188505
hist1h2a2
histone cluster 1 H2A family member 2
chr3_+_709393 0.00 ENSDART00000191970
AL929520.3

chr9_-_11549379 0.00 ENSDART00000187074
fev
FEV (ETS oncogene family)

Network of associatons between targets according to the STRING database.

First level regulatory network of arid5b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:1903373 regulation of endoplasmic reticulum tubular network organization(GO:1903371) positive regulation of endoplasmic reticulum tubular network organization(GO:1903373)
0.2 1.0 GO:0003400 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.2 0.9 GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:0006978) DNA damage response, signal transduction resulting in transcription(GO:0042772)
0.2 2.9 GO:0035803 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.2 0.9 GO:0044209 AMP salvage(GO:0044209)
0.1 0.6 GO:0019276 UDP-N-acetylgalactosamine metabolic process(GO:0019276)
0.1 0.4 GO:0048917 posterior lateral line ganglion development(GO:0048917)
0.1 1.4 GO:0000002 mitochondrial genome maintenance(GO:0000002)
0.1 0.6 GO:0098535 de novo centriole assembly(GO:0098535)
0.1 0.5 GO:0060231 mesenchymal to epithelial transition(GO:0060231)
0.1 0.7 GO:0021588 cerebellum formation(GO:0021588)
0.1 1.3 GO:1901222 regulation of NIK/NF-kappaB signaling(GO:1901222)
0.1 0.4 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 0.3 GO:0090386 phagosome maturation involved in apoptotic cell clearance(GO:0090386) phagolysosome assembly involved in apoptotic cell clearance(GO:0090387)
0.0 0.4 GO:0006390 transcription from mitochondrial promoter(GO:0006390)
0.0 0.4 GO:0044528 regulation of mitochondrial mRNA stability(GO:0044528)
0.0 0.2 GO:0006212 uracil catabolic process(GO:0006212) uracil metabolic process(GO:0019860)
0.0 0.4 GO:0072386 plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.0 0.3 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 0.2 GO:0060544 regulation of necrotic cell death(GO:0010939) regulation of necroptotic process(GO:0060544)
0.0 0.5 GO:0032418 lysosome localization(GO:0032418)
0.0 0.9 GO:0009648 photoperiodism(GO:0009648)
0.0 0.4 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.0 0.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 1.0 GO:0046579 positive regulation of Ras protein signal transduction(GO:0046579) positive regulation of small GTPase mediated signal transduction(GO:0051057)
0.0 0.3 GO:0043551 regulation of lipid kinase activity(GO:0043550) regulation of phosphatidylinositol 3-kinase activity(GO:0043551)
0.0 0.7 GO:0006406 mRNA export from nucleus(GO:0006406) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.0 0.3 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.7 GO:0048538 thymus development(GO:0048538)
0.0 0.1 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.5 GO:0060872 semicircular canal development(GO:0060872)
0.0 0.1 GO:0051601 exocyst localization(GO:0051601)
0.0 0.1 GO:0071265 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine biosynthetic process(GO:0071265) L-methionine salvage(GO:0071267)
0.0 0.4 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.2 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.0 GO:0032782 canalicular bile acid transport(GO:0015722) bile acid secretion(GO:0032782)
0.0 0.1 GO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway(GO:0030511) positive regulation of cellular response to transforming growth factor beta stimulus(GO:1903846)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0098826 endoplasmic reticulum tubular network membrane(GO:0098826)
0.2 0.6 GO:0098536 deuterosome(GO:0098536)
0.2 0.7 GO:0044609 DBIRD complex(GO:0044609)
0.1 0.3 GO:0070545 PeBoW complex(GO:0070545)
0.1 0.7 GO:0000347 THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445)
0.1 0.9 GO:0034751 aryl hydrocarbon receptor complex(GO:0034751)
0.1 0.4 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 1.0 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 1.4 GO:0005657 replication fork(GO:0005657)
0.0 0.2 GO:0005784 Sec61 translocon complex(GO:0005784)
0.0 0.5 GO:0031083 BLOC-1 complex(GO:0031083)
0.0 0.4 GO:0000314 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 1.0 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.3 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.3 GO:0071141 SMAD protein complex(GO:0071141)
0.0 0.3 GO:0045335 phagocytic vesicle(GO:0045335)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778) condensed nuclear chromosome, centromeric region(GO:0000780)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0043139 5'-3' DNA helicase activity(GO:0043139)
0.3 2.9 GO:0035804 structural constituent of egg coat(GO:0035804)
0.2 0.9 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.4 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971)
0.1 0.4 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.1 0.4 GO:0000033 alpha-1,3-mannosyltransferase activity(GO:0000033)
0.1 0.4 GO:0003958 NADPH-hemoprotein reductase activity(GO:0003958)
0.1 0.9 GO:0004711 ribosomal protein S6 kinase activity(GO:0004711)
0.0 0.2 GO:0002061 uracil binding(GO:0002058) pyrimidine nucleobase binding(GO:0002061) dihydropyrimidine dehydrogenase (NADP+) activity(GO:0017113)
0.0 0.4 GO:0051920 peroxiredoxin activity(GO:0051920)
0.0 0.1 GO:0004736 pyruvate carboxylase activity(GO:0004736)
0.0 0.7 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 1.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.2 GO:0016909 JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909)
0.0 0.2 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 0.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.4 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.0 0.6 GO:0008376 acetylgalactosaminyltransferase activity(GO:0008376)
0.0 0.4 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.0 GO:0001875 lipopolysaccharide receptor activity(GO:0001875)
0.0 0.0 GO:0015126 canalicular bile acid transmembrane transporter activity(GO:0015126) bile acid-exporting ATPase activity(GO:0015432)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 1.4 PID TELOMERASE PATHWAY Regulation of Telomerase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 0.8 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.0 0.2 REACTOME METABOLISM OF PORPHYRINS Genes involved in Metabolism of porphyrins
0.0 0.2 REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere