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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for bbx

Z-value: 0.17

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Transcription factors associated with bbx

Gene Symbol Gene ID Gene Info
bbx
ENSDARG00000012699 BBX high mobility group box domain containing

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bbxdr11_v1_chr10_-_28525611_28525611-0.762.4e-04Click!

Activity profile of bbx motif

Sorted Z-values of bbx motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_72003301 0.32 ENSDART00000012918
ENSDART00000182268
ENSDART00000185750
psmd9
proteasome 26S subunit, non-ATPase 9
chr23_+_19670085 0.31 ENSDART00000031872
kctd6b
potassium channel tetramerization domain containing 6b
chr9_-_30555725 0.24 ENSDART00000079222
chaf1b
chromatin assembly factor 1, subunit B
chr1_-_524433 0.19 ENSDART00000147610
si:ch73-41e3.7
si:ch73-41e3.7
chr10_-_43771447 0.19 ENSDART00000052307
arrdc3b
arrestin domain containing 3b
chr11_-_12104917 0.17 ENSDART00000136108
mrpl45
mitochondrial ribosomal protein L45
chr8_+_52701811 0.17 ENSDART00000179692
bcl2l16
BCL2 like 16
chr14_-_4177311 0.16 ENSDART00000128129
si:dkey-185e18.7
si:dkey-185e18.7
chr24_-_20926812 0.15 ENSDART00000130958
ccdc58
coiled-coil domain containing 58
chr13_-_7233811 0.15 ENSDART00000162026
ninl
ninein-like
chr2_-_41518340 0.14 ENSDART00000130830
otomp
otolith matrix protein
chr11_+_2416064 0.14 ENSDART00000067117
ube2v1
ubiquitin-conjugating enzyme E2 variant 1
chr12_+_41348969 0.14 ENSDART00000171352
si:ch211-27e6.1
si:ch211-27e6.1
chr20_-_25626693 0.13 ENSDART00000132247
paics
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr20_-_25626198 0.13 ENSDART00000126716
paics
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr20_-_25626428 0.13 ENSDART00000136475
paics
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
chr8_+_23034718 0.13 ENSDART00000184512
ythdf1
YTH N(6)-methyladenosine RNA binding protein 1
chr5_+_69733096 0.13 ENSDART00000169013
arl6ip4
ADP-ribosylation factor-like 6 interacting protein 4
chr17_+_24718272 0.12 ENSDART00000007271
mtfr1l
mitochondrial fission regulator 1-like
chr8_-_40205712 0.12 ENSDART00000158927
anapc5
anaphase promoting complex subunit 5
chr13_+_6086730 0.11 ENSDART00000049328
fam120b
family with sequence similarity 120B
chr23_+_35504824 0.11 ENSDART00000082647
ENSDART00000159218
acp1
acid phosphatase 1
chr20_+_25626479 0.11 ENSDART00000143883
ppat
phosphoribosyl pyrophosphate amidotransferase
chr23_+_22656477 0.11 ENSDART00000009337
ENSDART00000133322
eno1a
enolase 1a, (alpha)
chr21_+_38732945 0.10 ENSDART00000076157
rab24
RAB24, member RAS oncogene family
chr12_-_9700605 0.10 ENSDART00000161063
heatr1
HEAT repeat containing 1
chr24_-_28229618 0.10 ENSDART00000145290
bcl2a
BCL2, apoptosis regulator a
chr2_+_22659787 0.09 ENSDART00000043956
zgc:161973
zgc:161973
chr15_-_15983183 0.09 ENSDART00000154841
synrg
synergin, gamma
chr19_+_33093395 0.07 ENSDART00000019459
fam91a1
family with sequence similarity 91, member A1
chr11_-_7410537 0.07 ENSDART00000009859
adgrl4
adhesion G protein-coupled receptor L4
chr6_+_14980761 0.07 ENSDART00000087782
mrps9
mitochondrial ribosomal protein S9
chr10_-_16062565 0.07 ENSDART00000188728
si:dkey-184a18.5
si:dkey-184a18.5
chr19_+_33093577 0.07 ENSDART00000180317
fam91a1
family with sequence similarity 91, member A1
chr16_-_24195252 0.07 ENSDART00000136205
ENSDART00000048599
ENSDART00000161547
rps19
ribosomal protein S19
chr7_-_54320088 0.07 ENSDART00000172396
fadd
Fas (tnfrsf6)-associated via death domain
chr6_-_43922813 0.07 ENSDART00000123341
prok2
prokineticin 2
chr6_-_35052388 0.07 ENSDART00000181000
ENSDART00000170116
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1
chr12_+_23812530 0.06 ENSDART00000066331
svila
supervillin a
chr15_-_15983428 0.06 ENSDART00000115129
synrg
synergin, gamma
chr12_+_4222854 0.06 ENSDART00000144881
mapk7
mitogen-activated protein kinase 7
chr5_+_37744625 0.06 ENSDART00000014031
dpf2
D4, zinc and double PHD fingers family 2
chr23_-_24343363 0.05 ENSDART00000166392
fam131c
family with sequence similarity 131, member C
chr15_-_20190052 0.04 ENSDART00000157149
exoc3l2b
exocyst complex component 3-like 2b
chr23_+_3721042 0.04 ENSDART00000143323
smim29
small integral membrane protein 29
chr20_+_3934516 0.04 ENSDART00000165732
clec11a
C-type lectin domain containing 11A
chr7_-_50395059 0.04 ENSDART00000191150
vps33b
vacuolar protein sorting 33B
chr7_-_50395395 0.04 ENSDART00000065868
vps33b
vacuolar protein sorting 33B
chr25_+_20215964 0.04 ENSDART00000139235
tnnt2d
troponin T2d, cardiac
chr17_+_8212477 0.04 ENSDART00000064665
slc18b1
solute carrier family 18, subfamily B, member 1
chr1_-_28831848 0.04 ENSDART00000148536
GK3P
zgc:172295
chr21_+_29077509 0.04 ENSDART00000128561
ecscr
endothelial cell surface expressed chemotaxis and apoptosis regulator
chr7_+_5910467 0.04 ENSDART00000173232
si:ch211-113a14.22
si:ch211-113a14.22
chr15_-_35212462 0.04 ENSDART00000043960
agfg1a
ArfGAP with FG repeats 1a
chr16_-_30826712 0.03 ENSDART00000122474
ptk2ab
protein tyrosine kinase 2ab
chr9_-_7640692 0.03 ENSDART00000135616
dnajb2
DnaJ (Hsp40) homolog, subfamily B, member 2
chr18_-_17724295 0.03 ENSDART00000121553
fam192a
family with sequence similarity 192, member A
chr12_-_31484677 0.03 ENSDART00000066578
tectb
tectorin beta
chr20_+_50852356 0.03 ENSDART00000167517
ENSDART00000168396
gphnb
gephyrin b
chr13_-_9608943 0.03 ENSDART00000058066
cpxm1a
carboxypeptidase X (M14 family), member 1a
chr13_-_24669258 0.03 ENSDART00000000831
znf511
zinc finger protein 511
chr20_-_20248408 0.03 ENSDART00000183234
ppp2r5ea
protein phosphatase 2, regulatory subunit B', epsilon isoform a
chr16_+_16978424 0.03 ENSDART00000143128
rpl18
ribosomal protein L18
chr13_-_50565338 0.03 ENSDART00000062684
blnk
B cell linker
chr14_-_30808174 0.03 ENSDART00000173262
prss23
protease, serine, 23
chr3_-_37759969 0.02 ENSDART00000151105
ENSDART00000151208
si:dkey-260c8.6
si:dkey-260c8.6
chr11_-_18323059 0.02 ENSDART00000182590
SFMBT1
Scm like with four mbt domains 1
chr15_-_19051152 0.02 ENSDART00000186453
arhgap32a
Rho GTPase activating protein 32a
chr15_-_15357178 0.02 ENSDART00000106120
ywhag2
3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2
chr16_+_16977786 0.02 ENSDART00000043173
ENSDART00000132150
rpl18
ribosomal protein L18
chr18_+_39060687 0.02 ENSDART00000098729
ENSDART00000136367
zgc:171509
zgc:171509
chr4_-_73548389 0.02 ENSDART00000174327
ENSDART00000150753
ENSDART00000170775
si:ch73-266f23.1
si:ch73-266f23.1
chr19_+_10860485 0.02 ENSDART00000169962
si:ch73-347e22.4
si:ch73-347e22.4
chr9_-_10532591 0.02 ENSDART00000175269
thsd7ba
thrombospondin, type I, domain containing 7Ba
chr23_-_30781875 0.02 ENSDART00000114628
ENSDART00000180949
ENSDART00000191313
myt1a
myelin transcription factor 1a
chr14_+_33458294 0.02 ENSDART00000075278
atp1b4
ATPase Na+/K+ transporting subunit beta 4
chr1_+_29858032 0.02 ENSDART00000054066
zic2b
zic family member 2 (odd-paired homolog, Drosophila) b
chr8_-_36469117 0.02 ENSDART00000111240
mhc2dab
major histocompatibility complex class II DAB gene
chr14_+_36628131 0.02 ENSDART00000188625
ENSDART00000125345
TENM3
si:dkey-237h12.3
chr2_+_49246099 0.02 ENSDART00000179089
sema6ba
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
chr3_-_34816893 0.02 ENSDART00000084448
ENSDART00000154696
psmd11a
proteasome 26S subunit, non-ATPase 11a
chr17_+_8799661 0.02 ENSDART00000105326
tonsl
tonsoku-like, DNA repair protein
chr9_+_40546677 0.02 ENSDART00000132911
vwc2l
von Willebrand factor C domain containing protein 2-like
chr19_+_40856807 0.02 ENSDART00000139083
gngt1
guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
chr15_+_23528310 0.02 ENSDART00000152523
si:dkey-182i3.8
si:dkey-182i3.8
chr16_+_41570653 0.02 ENSDART00000102665
aste1a
asteroid homolog 1a
chr15_+_16886196 0.02 ENSDART00000139296
ENSDART00000049196
gdpd1
glycerophosphodiester phosphodiesterase domain containing 1
chr25_+_22107643 0.01 ENSDART00000089680
sigirr
single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
chr8_+_20951590 0.01 ENSDART00000138728
si:dkeyp-82a1.1
si:dkeyp-82a1.1
chr1_-_45039726 0.01 ENSDART00000186188
smu1b
SMU1, DNA replication regulator and spliceosomal factor b
chr2_-_10188598 0.01 ENSDART00000189122
dmbx1a
diencephalon/mesencephalon homeobox 1a
chr8_-_22157301 0.01 ENSDART00000158383
nphp4
nephronophthisis 4
chr4_+_5215950 0.01 ENSDART00000140613
galnt8b.2
polypeptide N-acetylgalactosaminyltransferase 8b, tandem duplicate 2
chr16_+_25316973 0.01 ENSDART00000086409
dync1i1
dynein, cytoplasmic 1, intermediate chain 1
chr1_-_9104631 0.01 ENSDART00000146642
si:ch211-14k19.8
si:ch211-14k19.8
chr1_+_55662491 0.01 ENSDART00000152386
adgre8
adhesion G protein-coupled receptor E8
chr1_+_55583116 0.01 ENSDART00000152163
adgre19
adhesion G protein-coupled receptor E19
chr6_+_36839509 0.01 ENSDART00000190605
ENSDART00000104160
zgc:110788
zgc:110788
chr4_+_16323970 0.01 ENSDART00000190651
BX322608.1

chr7_+_42460302 0.01 ENSDART00000004120
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18
chr18_+_15616167 0.01 ENSDART00000080454
slc17a8
solute carrier family 17 (vesicular glutamate transporter), member 8
chr15_+_36310442 0.01 ENSDART00000154678
gmnc
geminin coiled-coil domain containing
chr17_-_24439672 0.01 ENSDART00000155020
wdpcp
WD repeat containing planar cell polarity effector
chr11_+_10548171 0.01 ENSDART00000191497
b3gnt5a
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a
chr7_-_50604626 0.01 ENSDART00000073903
ENSDART00000174031
crtc3
CREB regulated transcription coactivator 3
chr16_+_12740790 0.01 ENSDART00000132957
epn1
epsin 1
chr1_+_12767318 0.01 ENSDART00000162652
pcdh10a
protocadherin 10a
chr2_+_19633493 0.01 ENSDART00000147989
pimr54
Pim proto-oncogene, serine/threonine kinase, related 54
chr9_+_48755638 0.01 ENSDART00000047401
abcb11a
ATP-binding cassette, sub-family B (MDR/TAP), member 11a
chr19_-_3773905 0.01 ENSDART00000168433
btr20
bloodthirsty-related gene family, member 20
chr1_+_23784905 0.01 ENSDART00000171951
ENSDART00000188521
ENSDART00000183029
ENSDART00000187183
slit2
slit homolog 2 (Drosophila)
chr7_+_11459235 0.01 ENSDART00000159611
il16
interleukin 16
chr4_+_11135048 0.01 ENSDART00000142389
cracr2ab
calcium release activated channel regulator 2Ab
chr4_-_5595237 0.01 ENSDART00000109854
vegfab
vascular endothelial growth factor Ab
chr23_-_30781510 0.01 ENSDART00000183364
myt1a
myelin transcription factor 1a
chr5_-_55933420 0.01 ENSDART00000050966
slc25a46
solute carrier family 25, member 46
chr10_-_29892486 0.01 ENSDART00000099983
bsx
brain-specific homeobox
chr5_-_42883761 0.01 ENSDART00000167374
BX323596.2

chr3_-_8265158 0.01 ENSDART00000171310
cyp2k6
cytochrome P450, family 2, subfamily K, polypeptide 6
chr16_-_41465542 0.01 ENSDART00000169116
ENSDART00000187446
cpne4a
copine IVa
chr16_+_14707960 0.01 ENSDART00000137912
col14a1a
collagen, type XIV, alpha 1a
chr15_-_5222924 0.01 ENSDART00000128924
or128-4
odorant receptor, family E, subfamily 128, member 4
chr4_+_74551606 0.01 ENSDART00000174339
kcna1b
potassium voltage-gated channel, shaker-related subfamily, member 1b
chr4_-_67969695 0.01 ENSDART00000190016
si:ch211-223k15.1
si:ch211-223k15.1
chr2_+_54804385 0.01 ENSDART00000172309
twsg1a
twisted gastrulation BMP signaling modulator 1a
chr18_-_4957022 0.01 ENSDART00000101686
zbbx
zinc finger, B-box domain containing
chr14_+_21005372 0.01 ENSDART00000170638
pimr195
Pim proto-oncogene, serine/threonine kinase, related 195
chr3_+_53511936 0.01 ENSDART00000177083
zmp:0000001048
zmp:0000001048
chr14_+_31766144 0.01 ENSDART00000075676
tmtops3a
teleost multiple tissue opsin 3a
chr21_-_22648007 0.01 ENSDART00000121788
gig2l
grass carp reovirus (GCRV)-induced gene 2l
chr8_-_36370552 0.01 ENSDART00000097932
ENSDART00000148323
si:busm1-104n07.3
si:busm1-104n07.3
chr1_+_55563532 0.01 ENSDART00000152549
adgre15
adhesion G protein-coupled receptor E15
chr6_-_39344259 0.01 ENSDART00000104074
zgc:158846
zgc:158846
chr22_+_35930526 0.01 ENSDART00000169242
LO016987.1

chr25_-_12730260 0.01 ENSDART00000171834
klhdc4
kelch domain containing 4
chr3_+_4113551 0.01 ENSDART00000192309
LO018551.1

chr8_+_20438884 0.01 ENSDART00000016422
ENSDART00000133794
mknk2b
MAP kinase interacting serine/threonine kinase 2b
chr23_+_579893 0.00 ENSDART00000189098
BX323461.1

chr1_-_33351780 0.00 ENSDART00000178996
gyg2
glycogenin 2
chr6_-_54816567 0.00 ENSDART00000150079
tnni1b
troponin I type 1b (skeletal, slow)
chr3_+_12755535 0.00 ENSDART00000161286
cyp2k17
cytochrome P450, family 2, subfamily K, polypeptide17
chr3_+_32553714 0.00 ENSDART00000165638
pax10
paired box 10
chr22_+_19230434 0.00 ENSDART00000132929
si:dkey-21e2.8
si:dkey-21e2.8
chr20_-_32752457 0.00 ENSDART00000153287
si:dkey-6f10.3
si:dkey-6f10.3
chr16_+_32014552 0.00 ENSDART00000047570
mboat7
membrane bound O-acyltransferase domain containing 7
chr11_+_40812590 0.00 ENSDART00000186690
errfi1a
ERBB receptor feedback inhibitor 1a
chr3_-_36612877 0.00 ENSDART00000167164
si:dkeyp-72e1.7
si:dkeyp-72e1.7
chr20_-_17259573 0.00 ENSDART00000166397
AL928808.1

chr22_+_9939901 0.00 ENSDART00000169777
ENSDART00000081420
zgc:171686
zgc:171686
chr11_+_30058139 0.00 ENSDART00000112254
nhsb
Nance-Horan syndrome b (congenital cataracts and dental anomalies)
chr21_-_22678195 0.00 ENSDART00000171231
gig2g
grass carp reovirus (GCRV)-induced gene 2g
chr20_+_5132138 0.00 ENSDART00000081351
ENSDART00000157685
cyp46a1.1
cytochrome P450, family 46, subfamily A, polypeptide 1, tandem duplicate 1
chr7_-_1163829 0.00 ENSDART00000181937
CT030017.1

chr4_+_57194439 0.00 ENSDART00000075265
si:dkey-16p6.4
si:dkey-16p6.4
chr17_+_21546993 0.00 ENSDART00000182387
chst15
carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
chr4_+_65061448 0.00 ENSDART00000172380
si:dkey-14o6.2
si:dkey-14o6.2
chr6_-_19042294 0.00 ENSDART00000159461
si:rp71-81e14.2
si:rp71-81e14.2
chr16_-_27566552 0.00 ENSDART00000142102
zgc:153215
zgc:153215
chr1_+_19535144 0.00 ENSDART00000103089
si:dkey-245p14.4
si:dkey-245p14.4
chr10_-_42751641 0.00 ENSDART00000182734
ENSDART00000113926
zgc:100918
zgc:100918
chr4_-_76102637 0.00 ENSDART00000186496
zgc:110171
zgc:110171
chr24_+_35981471 0.00 ENSDART00000157373
obscnb
obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b
chr16_-_20492799 0.00 ENSDART00000014769
chn2
chimerin 2
chr1_+_55643198 0.00 ENSDART00000060693
adgre7
adhesion G protein-coupled receptor E7
chr8_-_14091886 0.00 ENSDART00000137857
si:ch211-229n2.7
si:ch211-229n2.7
chr16_-_40373836 0.00 ENSDART00000134498
si:dkey-242e21.3
si:dkey-242e21.3
chr25_-_16076257 0.00 ENSDART00000140780
ovch2
ovochymase 2
chr1_+_45121393 0.00 ENSDART00000142702
muc13a
mucin 13a, cell surface associated
chr4_+_60296027 0.00 ENSDART00000172479
si:dkey-248e17.5
si:dkey-248e17.5
chr12_+_27156943 0.00 ENSDART00000153030
ENSDART00000001737
skap1
src kinase associated phosphoprotein 1
chr2_-_24403153 0.00 ENSDART00000177510
zgc:154006
zgc:154006
chr4_-_36032930 0.00 ENSDART00000191414
zgc:174180
zgc:174180

Network of associatons between targets according to the STRING database.

First level regulatory network of bbx

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.1 GO:0034454 microtubule anchoring at centrosome(GO:0034454)
0.0 0.2 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 0.3 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0036462 TRAIL-activated apoptotic signaling pathway(GO:0036462)
0.0 0.1 GO:0045943 positive regulation of transcription from RNA polymerase I promoter(GO:0045943)
0.0 0.1 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889)
0.0 0.1 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.0 GO:0072579 establishment of synaptic specificity at neuromuscular junction(GO:0007529) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040) glycine receptor clustering(GO:0072579)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0033186 CAF-1 complex(GO:0033186)
0.0 0.1 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371)
0.0 0.1 GO:0033263 CORVET complex(GO:0033263)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity(GO:0004639)
0.0 0.2 GO:0035197 siRNA binding(GO:0035197)
0.0 0.1 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.1 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.0 GO:0061599 molybdopterin adenylyltransferase activity(GO:0061598) molybdopterin molybdotransferase activity(GO:0061599)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis