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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for bsx

Z-value: 0.63

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Transcription factors associated with bsx

Gene Symbol Gene ID Gene Info
bsx
ENSDARG00000068976 brain-specific homeobox
bsx
ENSDARG00000110782 brain-specific homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bsxdr11_v1_chr10_-_29892486_29892486-0.272.8e-01Click!

Activity profile of bsx motif

Sorted Z-values of bsx motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_18130300 2.47 ENSDART00000169146
zgc:175135
zgc:175135
chr20_-_23426339 1.85 ENSDART00000004625
zar1
zygote arrest 1
chr11_+_18183220 1.74 ENSDART00000113468
LO018315.10

chr11_+_18157260 1.69 ENSDART00000144659
zgc:173545
zgc:173545
chr11_+_18175893 1.62 ENSDART00000177625
zgc:173545
zgc:173545
chr12_-_42368296 1.42 ENSDART00000171075
zgc:111868
zgc:111868
chr3_-_53091946 1.33 ENSDART00000187297
lpar2a
lysophosphatidic acid receptor 2a
chr24_-_10014512 1.10 ENSDART00000124341
ENSDART00000191630
zgc:171474
zgc:171474
chr3_-_53092509 1.06 ENSDART00000062081
lpar2a
lysophosphatidic acid receptor 2a
chr3_-_3448095 1.01 ENSDART00000078886
A2ML1 (1 of many)
si:dkey-46g23.5
chr21_-_43666420 1.00 ENSDART00000139008
ENSDART00000183996
ENSDART00000183395
si:dkey-229d11.3
si:dkey-229d11.5
si:dkey-229d11.3
si:dkey-229d11.5
chr11_-_6452444 0.99 ENSDART00000137879
ENSDART00000134957
ENSDART00000004483
larp6b
La ribonucleoprotein domain family, member 6b
chr24_-_10021341 0.96 ENSDART00000137250
zgc:173856
zgc:173856
chr16_-_24661526 0.95 ENSDART00000058959
pon3.2
paraoxonase 3, tandem duplicate 2
chr5_-_9216758 0.95 ENSDART00000134896
ENSDART00000147000
lrp13
low-density lipoprotein receptor related-protein 13
chr24_+_34069675 0.88 ENSDART00000143995
si:ch211-190p8.2
si:ch211-190p8.2
chr10_+_35554219 0.79 ENSDART00000077373
zdhhc20a
zinc finger, DHHC-type containing 20a
chr3_+_28860283 0.77 ENSDART00000077235
alg1
ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
chr1_-_513762 0.74 ENSDART00000148162
ENSDART00000144606
trmt10c
tRNA methyltransferase 10C, mitochondrial RNase P subunit
chr8_+_10304981 0.72 ENSDART00000160766
pim1
Pim-1 proto-oncogene, serine/threonine kinase
chr2_-_38287987 0.70 ENSDART00000185329
ENSDART00000061677
si:ch211-14a17.6
si:ch211-14a17.6
chr24_+_40860320 0.69 ENSDART00000161351
gorasp1b
golgi reassembly stacking protein 1b
chr10_-_44560165 0.67 ENSDART00000181217
ENSDART00000076084
npm2b
nucleophosmin/nucleoplasmin, 2b
chr16_-_17197546 0.65 ENSDART00000139939
ENSDART00000135146
ENSDART00000063800
ENSDART00000163606
gapdh
glyceraldehyde-3-phosphate dehydrogenase
chr6_+_13806466 0.63 ENSDART00000043522
tmem198b
transmembrane protein 198b
chr24_-_37640705 0.63 ENSDART00000066583
zgc:112496
zgc:112496
chr24_+_26134209 0.60 ENSDART00000038824
tmtopsb
teleost multiple tissue opsin b
chr13_+_21768447 0.55 ENSDART00000100941
chchd1
coiled-coil-helix-coiled-coil-helix domain containing 1
chr13_-_36911118 0.53 ENSDART00000048739
trim9
tripartite motif containing 9
chr20_-_40758410 0.53 ENSDART00000183031
cx34.5
connexin 34.5
chr2_+_8780443 0.53 ENSDART00000137768
zzz3
zinc finger, ZZ-type containing 3
chr12_-_32073611 0.52 ENSDART00000153369
ENSDART00000086531
cox11
cytochrome c oxidase assembly homolog 11 (yeast)
chr14_-_28567845 0.51 ENSDART00000126095
insb
preproinsulin b
chr3_+_56366395 0.50 ENSDART00000154367
cacng5b
calcium channel, voltage-dependent, gamma subunit 5b
chr13_+_17468161 0.49 ENSDART00000008906
znf503
zinc finger protein 503
chr17_+_24821627 0.47 ENSDART00000112389
wdr43
WD repeat domain 43
chr25_-_27621268 0.46 ENSDART00000146205
ENSDART00000073511
hyal6
hyaluronoglucosaminidase 6
chr1_-_55248496 0.45 ENSDART00000098615
nanos3
nanos homolog 3
chr10_-_21362071 0.45 ENSDART00000125167
avd
avidin
chr21_-_2209714 0.45 ENSDART00000163659
zgc:162971
zgc:162971
chr15_+_41027466 0.44 ENSDART00000075940
mtnr1ba
melatonin receptor type 1Ba
chr19_+_7152966 0.44 ENSDART00000080348
brd2a
bromodomain containing 2a
chr19_+_15521997 0.43 ENSDART00000003164
ppp1r8a
protein phosphatase 1, regulatory subunit 8a
chr3_-_26244256 0.43 ENSDART00000103741
ppp4ca
protein phosphatase 4, catalytic subunit a
chr1_-_45662774 0.43 ENSDART00000042158
serhl
serine hydrolase-like
chr10_-_21362320 0.43 ENSDART00000189789
avd
avidin
chr10_-_25217347 0.42 ENSDART00000036906
kpna7
karyopherin alpha 7 (importin alpha 8)
chr21_-_36396334 0.42 ENSDART00000183627
mrpl22
mitochondrial ribosomal protein L22
chr6_-_35046735 0.41 ENSDART00000143649
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1
chr9_-_24031461 0.41 ENSDART00000021218
rpe
ribulose-5-phosphate-3-epimerase
chr6_+_58832155 0.40 ENSDART00000144842
dctn2
dynactin 2 (p50)
chr13_-_3370638 0.40 ENSDART00000029649
prkn
parkin RBR E3 ubiquitin protein ligase
chr16_+_7242610 0.37 ENSDART00000081477
sri
sorcin
chr10_-_23099809 0.37 ENSDART00000148333
ENSDART00000079703
ENSDART00000162444
nle1
notchless homolog 1 (Drosophila)
chr2_+_38892631 0.37 ENSDART00000134040
si:ch211-119o8.4
si:ch211-119o8.4
chr17_+_16046132 0.37 ENSDART00000155005
si:ch73-204p21.2
si:ch73-204p21.2
chr13_-_9841806 0.36 ENSDART00000101949
sfxn4
sideroflexin 4
chr6_+_52212927 0.36 ENSDART00000143458
ywhaba
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a
chr11_-_16152400 0.35 ENSDART00000123665
arpc4l
actin related protein 2/3 complex, subunit 4, like
chr1_-_45049603 0.35 ENSDART00000023336
rps6
ribosomal protein S6
chr7_+_17106160 0.35 ENSDART00000190048
ENSDART00000180004
ENSDART00000013409
prmt3
protein arginine methyltransferase 3
chr1_-_12064715 0.35 ENSDART00000143628
ENSDART00000103406
pla2g12a
phospholipase A2, group XIIA
chr9_-_24030795 0.35 ENSDART00000144163
rpe
ribulose-5-phosphate-3-epimerase
chr8_+_36500061 0.35 ENSDART00000185840
slc7a4
solute carrier family 7, member 4
chr11_-_36350876 0.34 ENSDART00000146495
ENSDART00000020655
psma5
proteasome subunit alpha 5
chr6_-_46474483 0.33 ENSDART00000155761
rdh20
retinol dehydrogenase 20
chr14_+_24935131 0.33 ENSDART00000170871
ppargc1b
peroxisome proliferator-activated receptor gamma, coactivator 1 beta
chr20_-_28433990 0.33 ENSDART00000182824
ENSDART00000193381
wdr21
WD repeat domain 21
chr4_+_14981854 0.33 ENSDART00000067046
cax1
cation/H+ exchanger protein 1
chr16_+_33902006 0.33 ENSDART00000161807
ENSDART00000159474
gnl2
guanine nucleotide binding protein-like 2 (nucleolar)
chr24_-_36271352 0.33 ENSDART00000153682
ENSDART00000155892
si:ch211-40k21.5
si:ch211-40k21.5
chr19_-_5103141 0.33 ENSDART00000150952
tpi1a
triosephosphate isomerase 1a
chr18_-_29896367 0.32 ENSDART00000191303
cmc2
C-x(9)-C motif containing 2
chr12_-_48477031 0.32 ENSDART00000105176
ndufb8
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8
chr24_-_26945390 0.32 ENSDART00000123354
msl2b
male-specific lethal 2 homolog b (Drosophila)
chr17_+_16046314 0.32 ENSDART00000154554
ENSDART00000154338
ENSDART00000155336
si:ch73-204p21.2
si:ch73-204p21.2
chr20_+_18260358 0.32 ENSDART00000187734
ENSDART00000191947
ENSDART00000057039
taf4b
TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr21_+_42226113 0.30 ENSDART00000170362
GABRB2 (1 of many)
gamma-aminobutyric acid type A receptor beta2 subunit
chr2_+_10007113 0.30 ENSDART00000155213
slc35a3b
solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3b
chr25_-_32869794 0.29 ENSDART00000162784
tmem266
transmembrane protein 266
chr23_-_20051369 0.29 ENSDART00000049836
bgnb
biglycan b
chr23_+_39695827 0.29 ENSDART00000113893
ENSDART00000186679
tmco4
transmembrane and coiled-coil domains 4
chr17_+_37253706 0.29 ENSDART00000076004
tmem62
transmembrane protein 62
chr16_-_15988320 0.29 ENSDART00000160883
CABZ01060453.1

chr20_-_45060241 0.29 ENSDART00000185227
klhl29
kelch-like family member 29
chr19_+_12406583 0.28 ENSDART00000013865
ENSDART00000151535
seh1l
SEH1-like (S. cerevisiae)
chr12_+_22580579 0.28 ENSDART00000171725
ENSDART00000192290
capgb
capping protein (actin filament), gelsolin-like b
chr3_-_32596394 0.28 ENSDART00000103239
tspan4b
tetraspanin 4b
chr13_-_11984867 0.28 ENSDART00000157538
npm3
nucleophosmin/nucleoplasmin, 3
chr5_-_19006290 0.27 ENSDART00000137022
golga3
golgin A3
chr25_-_36370292 0.27 ENSDART00000152766
CR354435.1
Histone H2B 1/2
chr12_+_20352400 0.27 ENSDART00000066383
hbae5
hemoglobin, alpha embryonic 5
chr7_+_24528430 0.27 ENSDART00000133022
si:dkeyp-75h12.2
si:dkeyp-75h12.2
chr5_+_1079423 0.27 ENSDART00000172231
si:zfos-128g4.2
si:zfos-128g4.2
chr21_+_25777425 0.27 ENSDART00000021620
cldnd
claudin d
chr20_+_2134816 0.27 ENSDART00000039249
l3mbtl3
l(3)mbt-like 3 (Drosophila)
chr6_+_29707129 0.26 ENSDART00000023549
ENSDART00000164849
phb2b
prohibitin 2b
chr25_+_32755485 0.26 ENSDART00000162188
etfa
electron-transfer-flavoprotein, alpha polypeptide
chr3_-_41791178 0.25 ENSDART00000049687
grifin
galectin-related inter-fiber protein
chr10_+_25947946 0.25 ENSDART00000064393
ufm1
ubiquitin-fold modifier 1
chr3_+_17537352 0.25 ENSDART00000104549
hcrt
hypocretin (orexin) neuropeptide precursor
chr15_-_16177603 0.25 ENSDART00000156352
si:ch211-259g3.4
si:ch211-259g3.4
chr10_+_23099890 0.25 ENSDART00000135890
LTN1
si:dkey-175g6.5
chr12_+_23912074 0.25 ENSDART00000152864
svila
supervillin a
chr21_+_37442458 0.25 ENSDART00000180161
ENSDART00000186950
cox7b
cytochrome c oxidase subunit VIIb
chr3_-_16719244 0.25 ENSDART00000055859
pold1
polymerase (DNA directed), delta 1, catalytic subunit
chr20_-_37813863 0.25 ENSDART00000147529
batf3
basic leucine zipper transcription factor, ATF-like 3
chr5_+_68807170 0.25 ENSDART00000017849
her7
hairy and enhancer of split related-7
chr8_-_53166975 0.25 ENSDART00000114683
rbsn
rabenosyn, RAB effector
chr4_-_14191434 0.24 ENSDART00000142374
ENSDART00000136730
pus7l
pseudouridylate synthase 7-like
chr21_+_38732945 0.24 ENSDART00000076157
rab24
RAB24, member RAS oncogene family
chr7_-_54679595 0.24 ENSDART00000165320
ccnd1
cyclin D1
chr5_-_68333081 0.24 ENSDART00000168786
h1m
linker histone H1M
chr10_-_34002185 0.24 ENSDART00000046599
zar1l
zygote arrest 1-like
chr18_-_26894732 0.23 ENSDART00000147735
ENSDART00000188938
BX470164.1
si:dkey-24l11.2

si:dkey-24l11.2
chr19_-_10330778 0.23 ENSDART00000081465
ENSDART00000136653
ENSDART00000171232
ccdc106b
coiled-coil domain containing 106b
chr13_+_2625150 0.23 ENSDART00000164177
plpp4
phospholipid phosphatase 4
chr25_-_23583101 0.23 ENSDART00000149107
ENSDART00000103704
ENSDART00000184903
nap1l4a
nucleosome assembly protein 1-like 4a
chr19_-_5103313 0.22 ENSDART00000037007
tpi1a
triosephosphate isomerase 1a
chr11_-_1550709 0.22 ENSDART00000110097
si:ch73-303b9.1
si:ch73-303b9.1
chr7_-_23894879 0.22 ENSDART00000123203
vbp1
von Hippel-Lindau binding protein 1
chr23_-_35064785 0.21 ENSDART00000172240
BX294434.1

chr14_-_24110251 0.21 ENSDART00000079226
cpeb4a
cytoplasmic polyadenylation element binding protein 4a
chr11_+_33312601 0.21 ENSDART00000188024
cntnap5l
contactin associated protein-like 5 like
chr3_+_6469754 0.21 ENSDART00000185809
NUP85 (1 of many)
nucleoporin 85
chr4_-_2380173 0.21 ENSDART00000177727
nap1l1
nucleosome assembly protein 1-like 1
chr1_+_11977426 0.21 ENSDART00000103399
tspan5b
tetraspanin 5b
chr3_+_32365811 0.20 ENSDART00000155967
ap2a1
adaptor-related protein complex 2, alpha 1 subunit
chr12_+_10116912 0.20 ENSDART00000189630
si:dkeyp-118b1.2
si:dkeyp-118b1.2
chr10_+_518546 0.20 ENSDART00000128275
npffr1l3
neuropeptide FF receptor 1 like 3
chr25_-_29087925 0.20 ENSDART00000171758
rpp25a
ribonuclease P and MRP subunit p25, a
chr8_-_20243389 0.20 ENSDART00000184904
acer1
alkaline ceramidase 1
chr9_+_50600355 0.20 ENSDART00000187567
fign
fidgetin
chr16_+_42471455 0.20 ENSDART00000166640
si:ch211-215k15.5
si:ch211-215k15.5
chr21_-_2322102 0.20 ENSDART00000162867
zgc:66483
zgc:66483
chr24_-_24111674 0.19 ENSDART00000024606
zgc:112982
zgc:112982
chr14_+_34490445 0.19 ENSDART00000132193
ENSDART00000148044
wnt8a
wingless-type MMTV integration site family, member 8a
chr3_+_18398876 0.19 ENSDART00000141100
ENSDART00000138107
rps2
ribosomal protein S2
chr19_+_31585917 0.18 ENSDART00000132182
gmnn
geminin, DNA replication inhibitor
chr4_-_16833518 0.18 ENSDART00000179867
ldhba
lactate dehydrogenase Ba
chr23_-_25135046 0.18 ENSDART00000184844
ENSDART00000103989
idh3g
isocitrate dehydrogenase 3 (NAD+) gamma
chr19_+_5543072 0.18 ENSDART00000082080
jupb
junction plakoglobin b
chr5_+_50879545 0.18 ENSDART00000128402
nol6
nucleolar protein 6 (RNA-associated)
chr16_+_29509133 0.18 ENSDART00000112116
ctss2.1
cathepsin S, ortholog2, tandem duplicate 1
chr25_+_35375848 0.18 ENSDART00000155721
ano3
anoctamin 3
chr13_+_36984794 0.18 ENSDART00000137328
frmd6
FERM domain containing 6
chr1_-_33645967 0.18 ENSDART00000192758
cldng
claudin g
chr14_+_5936996 0.18 ENSDART00000097144
ENSDART00000126777
kctd8
potassium channel tetramerization domain containing 8
chr2_+_26656283 0.17 ENSDART00000133202
ENSDART00000099208
asph
aspartate beta-hydroxylase
chr10_-_32494499 0.17 ENSDART00000129395
uvrag
UV radiation resistance associated gene
chr16_+_47207691 0.17 ENSDART00000062507
ica1
islet cell autoantigen 1
chr21_+_34088110 0.17 ENSDART00000145123
ENSDART00000029599
ENSDART00000147519
mtmr1b
myotubularin related protein 1b
chr22_-_20166660 0.17 ENSDART00000085913
ENSDART00000188241
btbd2a
BTB (POZ) domain containing 2a
chr12_+_10115964 0.16 ENSDART00000152369
si:dkeyp-118b1.2
si:dkeyp-118b1.2
chr16_-_32304764 0.16 ENSDART00000143859
ENSDART00000134381
mms22l
MMS22-like, DNA repair protein
chr21_-_11654422 0.16 ENSDART00000081614
ENSDART00000132699
cast
calpastatin
chr10_-_32494304 0.16 ENSDART00000028161
uvrag
UV radiation resistance associated gene
chr19_-_205104 0.16 ENSDART00000011890
zbtb22a
zinc finger and BTB domain containing 22a
chr8_-_37249813 0.16 ENSDART00000098634
ENSDART00000140233
ENSDART00000061328
rbm39b
RNA binding motif protein 39b
chr7_-_17816175 0.16 ENSDART00000091272
ENSDART00000173757
ecsit
ECSIT signalling integrator
chr5_+_29794058 0.16 ENSDART00000045410
thy1
Thy-1 cell surface antigen
chr21_+_17768174 0.16 ENSDART00000141380
rxraa
retinoid X receptor, alpha a
chr21_+_4313039 0.16 ENSDART00000141146
HTRA2 (1 of many)
si:dkey-84o3.4
chr22_+_9003090 0.15 ENSDART00000106414
rnh1
ribonuclease/angiogenin inhibitor 1
chr23_-_35790235 0.15 ENSDART00000142369
ENSDART00000141141
ENSDART00000011004
mfsd5
major facilitator superfamily domain containing 5
chr1_-_39983730 0.15 ENSDART00000160066
ing2
inhibitor of growth family, member 2
chr6_+_47846366 0.15 ENSDART00000064842
padi2
peptidyl arginine deiminase, type II
chr2_+_37227011 0.15 ENSDART00000126587
ENSDART00000084958
samd7
sterile alpha motif domain containing 7
chr6_-_25163722 0.15 ENSDART00000192225
znf326
zinc finger protein 326
chr24_-_30843250 0.15 ENSDART00000162920
ptbp2a
polypyrimidine tract binding protein 2a
chr19_+_31873308 0.15 ENSDART00000146560
ENSDART00000133045
si:dkeyp-34f6.4
si:dkeyp-34f6.4
chr11_-_28050559 0.15 ENSDART00000136859
ece1
endothelin converting enzyme 1
chr2_+_50608099 0.15 ENSDART00000185805
ENSDART00000111135
neurod6b
neuronal differentiation 6b
chr5_-_31856681 0.14 ENSDART00000187817
pkn3
protein kinase N3
chr25_+_25516016 0.14 ENSDART00000188980
phrf1
PHD and ring finger domains 1
chr14_-_33334065 0.14 ENSDART00000052761
rpl39
ribosomal protein L39
chr21_-_35325466 0.14 ENSDART00000134780
ENSDART00000145930
ENSDART00000076715
ENSDART00000065341
ENSDART00000162189
ublcp1
ubiquitin-like domain containing CTD phosphatase 1
chr6_+_28208973 0.14 ENSDART00000171216
ENSDART00000171377
ENSDART00000167389
ENSDART00000166988
LSM2 (1 of many)
si:ch73-14h10.2
chr11_-_36341028 0.14 ENSDART00000146093
sort1a
sortilin 1a
chr21_-_11575626 0.14 ENSDART00000133171
cast
calpastatin
chr17_-_6514962 0.14 ENSDART00000163514
dnajc5gb
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b
chr24_+_32668675 0.14 ENSDART00000156638
ENSDART00000155973
si:ch211-282b22.1
si:ch211-282b22.1
chr23_-_4966821 0.13 ENSDART00000147122
ENSDART00000145760
ngfa
nerve growth factor a (beta polypeptide)
chr11_+_26604224 0.13 ENSDART00000030453
ENSDART00000168895
ENSDART00000159505
dynlrb1
dynein, light chain, roadblock-type 1
chr8_+_26253252 0.13 ENSDART00000142031
slc26a6
solute carrier family 26, member 6
chr9_-_35875051 0.13 ENSDART00000013432
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28
chr21_+_45502621 0.13 ENSDART00000166719
si:dkey-223p19.2
si:dkey-223p19.2
chr2_-_32666174 0.13 ENSDART00000133660
puf60a
poly-U binding splicing factor a
chr8_+_31435452 0.12 ENSDART00000145282
selenop
selenoprotein P
chr16_+_39159752 0.12 ENSDART00000122081
sybu
syntabulin (syntaxin-interacting)
chr5_+_6954162 0.12 ENSDART00000086666
stpg2
sperm-tail PG-rich repeat containing 2
chr10_+_33744098 0.12 ENSDART00000147775
rxfp2a
relaxin/insulin-like family peptide receptor 2a
chr25_+_25508495 0.12 ENSDART00000150719
phrf1
PHD and ring finger domains 1
chr22_-_10586191 0.12 ENSDART00000148418
si:dkey-42i9.16
si:dkey-42i9.16
chr15_+_436776 0.12 ENSDART00000008504
med17
mediator complex subunit 17
chr16_-_49646625 0.12 ENSDART00000101629
efhb
EF-hand domain family, member B
chr23_-_19715557 0.12 ENSDART00000143764
rpl10
ribosomal protein L10
chr15_-_16704417 0.12 ENSDART00000155163
caln1
calneuron 1
chr25_+_18965430 0.11 ENSDART00000169742
tdg.1
thymine DNA glycosylase, tandem duplicate 1
chr19_+_2279051 0.11 ENSDART00000182103
itgb8
integrin, beta 8

Network of associatons between targets according to the STRING database.

First level regulatory network of bsx

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.4 GO:0045647 negative regulation of erythrocyte differentiation(GO:0045647)
0.3 0.8 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.7 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.6 GO:0046166 methylglyoxal biosynthetic process(GO:0019242) glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.1 0.4 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.1 0.4 GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.1 0.3 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000448)
0.1 0.2 GO:0072111 spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111)
0.1 0.3 GO:0042755 eating behavior(GO:0042755)
0.1 0.2 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.1 0.2 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 3.3 GO:0070098 chemokine-mediated signaling pathway(GO:0070098)
0.1 0.3 GO:1990564 protein polyufmylation(GO:1990564) protein K69-linked ufmylation(GO:1990592)
0.0 0.2 GO:0031571 mitotic G1 DNA damage checkpoint(GO:0031571)
0.0 0.3 GO:0097340 inhibition of cysteine-type endopeptidase activity(GO:0097340) zymogen inhibition(GO:0097341)
0.0 0.7 GO:0035803 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0 0.7 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:1990403 embryonic brain development(GO:1990403)
0.0 0.6 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.3 GO:0061635 regulation of protein complex stability(GO:0061635)
0.0 0.2 GO:0002159 desmosome assembly(GO:0002159)
0.0 0.3 GO:0070584 mitochondrion morphogenesis(GO:0070584)
0.0 0.4 GO:0030719 P granule organization(GO:0030719)
0.0 0.5 GO:0030214 hyaluronan catabolic process(GO:0030214)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.2 GO:0018197 peptidyl-aspartic acid modification(GO:0018197) peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0 0.3 GO:0043984 histone H4-K16 acetylation(GO:0043984)
0.0 0.3 GO:0051315 attachment of mitotic spindle microtubules to kinetochore(GO:0051315)
0.0 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 1.5 GO:0018198 peptidyl-cysteine modification(GO:0018198)
0.0 0.1 GO:0060074 synapse maturation(GO:0060074)
0.0 0.2 GO:0002931 response to ischemia(GO:0002931)
0.0 0.1 GO:0019240 citrulline biosynthetic process(GO:0019240)
0.0 0.5 GO:0098943 neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943)
0.0 0.7 GO:0007634 optokinetic behavior(GO:0007634)
0.0 0.5 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 0.1 GO:0009438 methylglyoxal metabolic process(GO:0009438)
0.0 0.2 GO:0090342 regulation of cell aging(GO:0090342)
0.0 0.3 GO:0050482 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963)
0.0 0.4 GO:0018216 peptidyl-arginine methylation(GO:0018216)
0.0 0.2 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.2 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0051454 pH elevation(GO:0045852) intracellular pH elevation(GO:0051454)
0.0 0.1 GO:0051645 Golgi localization(GO:0051645) maintenance of centrosome location(GO:0051661)
0.0 2.5 GO:0048545 response to steroid hormone(GO:0048545)
0.0 0.4 GO:0002574 thrombocyte differentiation(GO:0002574)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:0061588 calcium activated phospholipid scrambling(GO:0061588)
0.0 0.3 GO:0015781 pyrimidine nucleotide-sugar transport(GO:0015781) pyrimidine nucleotide-sugar transmembrane transport(GO:0090481)
0.0 0.6 GO:0051014 actin filament severing(GO:0051014)
0.0 0.2 GO:0046512 diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.1 GO:0006895 Golgi to endosome transport(GO:0006895)
0.0 0.4 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0046462 phosphatidylserine catabolic process(GO:0006660) monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0 0.4 GO:0021952 central nervous system projection neuron axonogenesis(GO:0021952)
0.0 0.5 GO:0032543 mitochondrial translation(GO:0032543)
0.0 1.6 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.5 GO:0042255 ribosome assembly(GO:0042255)
0.0 0.4 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.0 GO:0002074 extraocular skeletal muscle development(GO:0002074)
0.0 0.4 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0060049 regulation of protein glycosylation(GO:0060049)
0.0 0.3 GO:0015671 oxygen transport(GO:0015671)
0.0 0.0 GO:0060254 N-terminal protein palmitoylation(GO:0006500) negative regulation of lipoprotein metabolic process(GO:0050748) regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060)
0.0 0.0 GO:0044210 'de novo' CTP biosynthetic process(GO:0044210)
0.0 0.1 GO:0048672 positive regulation of collateral sprouting(GO:0048672)
0.0 0.1 GO:1990108 protein linear deubiquitination(GO:1990108)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0042645 nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.1 0.2 GO:0097189 apoptotic body(GO:0097189)
0.1 0.2 GO:0032545 CURI complex(GO:0032545) UTP-C complex(GO:0034456)
0.1 0.5 GO:0005671 Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.0 0.2 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.3 GO:0072487 MSL complex(GO:0072487)
0.0 0.4 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0044609 DBIRD complex(GO:0044609)
0.0 0.2 GO:0000172 ribonuclease MRP complex(GO:0000172)
0.0 0.3 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.1 GO:0070209 ASTRA complex(GO:0070209)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.3 GO:0031838 haptoglobin-hemoglobin complex(GO:0031838)
0.0 0.2 GO:0030122 AP-2 adaptor complex(GO:0030122)
0.0 1.0 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 0.1 GO:0070847 core mediator complex(GO:0070847)
0.0 0.3 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.1 GO:0032591 dendritic spine membrane(GO:0032591)
0.0 0.1 GO:0031931 TORC1 complex(GO:0031931)
0.0 0.2 GO:0035101 FACT complex(GO:0035101)
0.0 0.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 1.0 GO:0000313 organellar ribosome(GO:0000313) mitochondrial ribosome(GO:0005761)
0.0 0.3 GO:0031312 extrinsic component of organelle membrane(GO:0031312)
0.0 0.2 GO:0005869 dynactin complex(GO:0005869)
0.0 0.0 GO:0097268 cytoophidium(GO:0097268)
0.0 0.5 GO:0032281 AMPA glutamate receptor complex(GO:0032281)
0.0 0.2 GO:0016363 nuclear matrix(GO:0016363)
0.0 0.1 GO:0031616 spindle pole centrosome(GO:0031616)
0.0 1.1 GO:0000786 nucleosome(GO:0000786)
0.0 0.1 GO:0017119 Golgi transport complex(GO:0017119)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0004064 arylesterase activity(GO:0004064)
0.2 3.3 GO:0031726 CCR1 chemokine receptor binding(GO:0031726) CCR4 chemokine receptor binding(GO:0031729)
0.2 0.7 GO:0052905 tRNA (guanine(9)-N(1))-methyltransferase activity(GO:0052905)
0.2 0.9 GO:0009374 biotin binding(GO:0009374)
0.2 2.4 GO:0070915 lysophosphatidic acid receptor activity(GO:0070915)
0.2 0.6 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 0.4 GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity(GO:0004377)
0.1 0.6 GO:0008929 triose-phosphate isomerase activity(GO:0004807) methylglyoxal synthase activity(GO:0008929)
0.1 0.3 GO:0048030 disaccharide binding(GO:0048030)
0.1 0.4 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.3 GO:0015369 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.1 0.4 GO:0008502 melatonin receptor activity(GO:0008502)
0.1 0.3 GO:0030331 estrogen receptor binding(GO:0030331)
0.0 0.4 GO:0004865 protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0 0.3 GO:0010859 calcium-dependent cysteine-type endopeptidase inhibitor activity(GO:0010859)
0.0 0.2 GO:0004597 peptide-aspartate beta-dioxygenase activity(GO:0004597)
0.0 0.7 GO:0032190 acrosin binding(GO:0032190)
0.0 0.8 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.2 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.5 GO:0004415 hyalurononglucosaminidase activity(GO:0004415)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.2 GO:0017040 ceramidase activity(GO:0017040)
0.0 0.1 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.3 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.7 GO:0000030 mannosyltransferase activity(GO:0000030)
0.0 0.1 GO:0008430 selenium binding(GO:0008430)
0.0 0.1 GO:0004576 oligosaccharyl transferase activity(GO:0004576) dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.0 0.3 GO:0031720 haptoglobin binding(GO:0031720)
0.0 0.2 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.4 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.2 GO:0045294 alpha-catenin binding(GO:0045294)
0.0 0.9 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.2 GO:0008568 microtubule-severing ATPase activity(GO:0008568)
0.0 0.1 GO:0004945 angiotensin type II receptor activity(GO:0004945)
0.0 0.2 GO:0044323 retinoic acid-responsive element binding(GO:0044323)
0.0 0.1 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.2 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.3 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.3 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.1 GO:0004329 formate-tetrahydrofolate ligase activity(GO:0004329)
0.0 0.1 GO:0050220 prostaglandin-E synthase activity(GO:0050220)
0.0 0.3 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0000700 mismatch base pair DNA N-glycosylase activity(GO:0000700) pyrimidine-specific mismatch base pair DNA N-glycosylase activity(GO:0008263)
0.0 0.2 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)
0.0 0.0 GO:0003883 CTP synthase activity(GO:0003883)
0.0 0.1 GO:0044736 acid-sensing ion channel activity(GO:0044736)
0.0 0.1 GO:0005165 nerve growth factor receptor binding(GO:0005163) neurotrophin receptor binding(GO:0005165)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 PID IL5 PATHWAY IL5-mediated signaling events
0.0 0.2 PID P38 GAMMA DELTA PATHWAY Signaling mediated by p38-gamma and p38-delta
0.0 0.4 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.2 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway
0.0 0.8 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.2 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions
0.0 0.1 PID INTEGRIN5 PATHWAY Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.0 0.2 PID ARF 3PATHWAY Arf1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 REACTOME ACYL CHAIN REMODELLING OF PI Genes involved in Acyl chain remodelling of PI
0.0 0.5 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.0 0.6 REACTOME GLYCOLYSIS Genes involved in Glycolysis
0.0 0.8 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.2 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.2 REACTOME RETROGRADE NEUROTROPHIN SIGNALLING Genes involved in Retrograde neurotrophin signalling
0.0 0.8 REACTOME RESPIRATORY ELECTRON TRANSPORT Genes involved in Respiratory electron transport
0.0 0.1 REACTOME PLATELET SENSITIZATION BY LDL Genes involved in Platelet sensitization by LDL
0.0 0.2 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.2 REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX Genes involved in Association of licensing factors with the pre-replicative complex
0.0 0.2 REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION Genes involved in Pre-NOTCH Transcription and Translation
0.0 0.4 REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)