Project
PRJNA438478: RNAseq of wild type zebrafish germline
Navigation
Downloads
Results for hlx1
Z-value: 0.29
Motif logo
Transcription factors associated with hlx1
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
hlx1
|
ENSDARG00000009134 | H2.0-like homeo box 1 (Drosophila) |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| hlx1 | dr11_v1_chr20_-_52199296_52199311 | -0.84 | 1.1e-05 | Click! |
Activity profile of hlx1 motif
Sorted Z-values of hlx1 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr17_-_2590222 | 0.98 |
ENSDART00000185711
|
CR759892.1
|
|
| chr16_+_46401756 | 0.56 |
ENSDART00000147370
ENSDART00000144000 |
rpz2
|
rapunzel 2 |
| chr9_+_45227028 | 0.53 |
ENSDART00000185579
|
adarb1b
|
adenosine deaminase, RNA-specific, B1b |
| chr17_+_7620220 | 0.45 |
ENSDART00000081447
|
fbxo30a
|
F-box protein 30a |
| chr23_-_29394505 | 0.44 |
ENSDART00000017728
|
pgd
|
phosphogluconate dehydrogenase |
| chr10_+_43039947 | 0.30 |
ENSDART00000193434
|
atg10
|
ATG10 autophagy related 10 homolog (S. cerevisiae) |
| chr16_+_46401576 | 0.25 |
ENSDART00000130264
|
rpz
|
rapunzel |
| chr8_+_50953776 | 0.22 |
ENSDART00000013870
|
zgc:56596
|
zgc:56596 |
| chr5_-_23581355 | 0.20 |
ENSDART00000191869
|
cwc15
|
CWC15 spliceosome-associated protein homolog (S. cerevisiae) |
| chr17_+_49281597 | 0.18 |
ENSDART00000155599
|
zgc:113176
|
zgc:113176 |
| chr8_-_11834599 | 0.16 |
ENSDART00000190986
|
rapgef1a
|
Rap guanine nucleotide exchange factor (GEF) 1a |
| chr17_+_9310259 | 0.16 |
ENSDART00000186158
ENSDART00000190329 |
NPAS3
|
neuronal PAS domain protein 3 |
| chr3_-_20040636 | 0.15 |
ENSDART00000104118
|
atxn7l3
|
ataxin 7-like 3 |
| chr9_+_39026311 | 0.14 |
ENSDART00000188203
|
cps1
|
carbamoyl-phosphate synthase 1, mitochondrial |
| chr14_-_7207961 | 0.13 |
ENSDART00000167994
ENSDART00000166532 |
stox2b
|
storkhead box 2b |
| chr22_-_20950448 | 0.13 |
ENSDART00000002029
|
fkbp8
|
FK506 binding protein 8 |
| chr17_+_8799661 | 0.11 |
ENSDART00000105326
|
tonsl
|
tonsoku-like, DNA repair protein |
| chr16_+_7380463 | 0.10 |
ENSDART00000029727
ENSDART00000149086 |
atg5
|
ATG5 autophagy related 5 homolog (S. cerevisiae) |
| chr17_+_8799451 | 0.10 |
ENSDART00000189814
ENSDART00000191577 |
tonsl
|
tonsoku-like, DNA repair protein |
| chr8_+_7801060 | 0.07 |
ENSDART00000161618
|
tfe3a
|
transcription factor binding to IGHM enhancer 3a |
| chr3_+_29714775 | 0.07 |
ENSDART00000041388
|
cacng2a
|
calcium channel, voltage-dependent, gamma subunit 2a |
| chr11_-_16394971 | 0.07 |
ENSDART00000180981
ENSDART00000179925 |
lrig1
|
leucine-rich repeats and immunoglobulin-like domains 1 |
| chr9_-_23118350 | 0.06 |
ENSDART00000020884
|
lypd6
|
LY6/PLAUR domain containing 6 |
| chr13_+_22964868 | 0.03 |
ENSDART00000142129
|
tacr2
|
tachykinin receptor 2 |
| chr7_+_21272833 | 0.02 |
ENSDART00000052942
|
serpinh2
|
serine (or cysteine) peptidase inhibitor, clade H, member 2 |
| chr6_-_28980756 | 0.01 |
ENSDART00000014661
|
glmnb
|
glomulin, FKBP associated protein b |
| chr2_+_29842878 | 0.01 |
ENSDART00000131376
|
si:ch211-207d6.2
|
si:ch211-207d6.2 |
| chr8_-_39952727 | 0.00 |
ENSDART00000181310
|
cabp1a
|
calcium binding protein 1a |
Network of associatons between targets according to the STRING database.
First level regulatory network of hlx1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | GO:0006382 | adenosine to inosine editing(GO:0006382) |
| 0.0 | 0.4 | GO:0006098 | pentose-phosphate shunt(GO:0006098) |
| 0.0 | 0.1 | GO:0043416 | regulation of skeletal muscle tissue regeneration(GO:0043416) |
| 0.0 | 0.1 | GO:0097272 | ammonia homeostasis(GO:0097272) |
| 0.0 | 0.2 | GO:0071816 | tail-anchored membrane protein insertion into ER membrane(GO:0071816) |
| 0.0 | 0.2 | GO:0045292 | mRNA cis splicing, via spliceosome(GO:0045292) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0071818 | BAT3 complex(GO:0071818) |
| 0.0 | 0.2 | GO:0005662 | DNA replication factor A complex(GO:0005662) |
| 0.0 | 0.2 | GO:0071007 | U2-type catalytic step 2 spliceosome(GO:0071007) |
| 0.0 | 0.1 | GO:0034045 | pre-autophagosomal structure membrane(GO:0034045) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0019777 | Atg12 transferase activity(GO:0019777) |
| 0.0 | 0.5 | GO:0003726 | double-stranded RNA adenosine deaminase activity(GO:0003726) |
| 0.0 | 0.1 | GO:0004087 | carbamoyl-phosphate synthase (ammonia) activity(GO:0004087) |