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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for irf1a

Z-value: 0.52

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Transcription factors associated with irf1a

Gene Symbol Gene ID Gene Info
irf1a
ENSDARG00000043492 interferon regulatory factor 1a

Activity profile of irf1a motif

Sorted Z-values of irf1a motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_37638873 1.60 ENSDART00000186384
ENSDART00000184291
ENSDART00000131782
ENSDART00000140502
sh2d5
SH2 domain containing 5
chr14_+_36414856 1.46 ENSDART00000123343
ENSDART00000015761
neil3
nei-like DNA glycosylase 3
chr3_-_34586403 1.44 ENSDART00000151515
sept9a
septin 9a
chr3_-_3398383 1.23 ENSDART00000047865
si:dkey-46g23.2
si:dkey-46g23.2
chr6_+_38896158 1.22 ENSDART00000029930
ENSDART00000131347
slc48a1b
solute carrier family 48 (heme transporter), member 1b
chr9_+_37754845 1.19 ENSDART00000100592
pdia5
protein disulfide isomerase family A, member 5
chr9_-_20853439 1.17 ENSDART00000028247
ENSDART00000133321
gdap2
ganglioside induced differentiation associated protein 2
chr17_+_25833947 1.11 ENSDART00000044328
ENSDART00000154604
acss1
acyl-CoA synthetase short chain family member 1
chr1_-_52790724 1.06 ENSDART00000139577
ENSDART00000100937
patl1
protein associated with topoisomerase II homolog 1 (yeast)
chr20_-_23254876 1.06 ENSDART00000141510
ociad1
OCIA domain containing 1
chr5_-_26247215 1.03 ENSDART00000136806
erap1b
endoplasmic reticulum aminopeptidase 1b
chr6_+_29861288 1.02 ENSDART00000166782
dlg1
discs, large homolog 1 (Drosophila)
chr7_-_54430505 1.00 ENSDART00000167905
ano1
anoctamin 1, calcium activated chloride channel
chr19_+_42336523 0.96 ENSDART00000151304
anp32e
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr5_-_38248347 0.87 ENSDART00000084917
ENSDART00000139479
slc12a9
solute carrier family 12, member 9
chr18_-_38270430 0.86 ENSDART00000139519
caprin1b
cell cycle associated protein 1b
chr9_-_14273652 0.86 ENSDART00000135458
abcb6b
ATP-binding cassette, sub-family B (MDR/TAP), member 6b
chr23_-_36449111 0.84 ENSDART00000110478
zgc:174906
zgc:174906
chr2_-_38287987 0.82 ENSDART00000185329
ENSDART00000061677
si:ch211-14a17.6
si:ch211-14a17.6
chr7_-_60351876 0.82 ENSDART00000098563
plcb3
phospholipase C, beta 3 (phosphatidylinositol-specific)
chr16_+_26439518 0.79 ENSDART00000041787
trim35-28
tripartite motif containing 35-28
chr3_-_36127234 0.76 ENSDART00000130917
coil
coilin p80
chr2_-_55797318 0.76 ENSDART00000158147
calr3b
calreticulin 3b
chr2_-_42552666 0.75 ENSDART00000141399
dip2cb
disco-interacting protein 2 homolog Cb
chr8_+_54081819 0.73 ENSDART00000005857
ENSDART00000161795
prickle2a
prickle homolog 2a
chr7_-_19369002 0.72 ENSDART00000165680
ntn4
netrin 4
chr3_+_36127287 0.71 ENSDART00000058605
ENSDART00000182500
scpep1
serine carboxypeptidase 1
chr22_-_8006342 0.69 ENSDART00000162028
sc:d217
sc:d217
chr12_-_13549538 0.68 ENSDART00000133895
ghdc
GH3 domain containing
chr15_+_20352123 0.67 ENSDART00000011030
ENSDART00000163532
ENSDART00000169537
ENSDART00000161047
il15l
interleukin 15, like
chr5_+_32815745 0.64 ENSDART00000181535
crata
carnitine O-acetyltransferase a
chr1_-_38361496 0.64 ENSDART00000015323
fbxo8
F-box protein 8
chr3_+_24094581 0.62 ENSDART00000138270
ENSDART00000131509
copz2
coatomer protein complex, subunit zeta 2
chr6_+_41554794 0.61 ENSDART00000165424
srgap3
SLIT-ROBO Rho GTPase activating protein 3
chr21_-_26715270 0.61 ENSDART00000053794
banf1
barrier to autointegration factor 1
chr12_-_37299646 0.61 ENSDART00000146142
ENSDART00000085201
pmp22b
peripheral myelin protein 22b
chr13_+_7578111 0.60 ENSDART00000175431
gbf1
golgi brefeldin A resistant guanine nucleotide exchange factor 1
chr5_-_26247671 0.59 ENSDART00000145187
erap1b
endoplasmic reticulum aminopeptidase 1b
chr9_+_22631672 0.58 ENSDART00000101770
ENSDART00000126015
ENSDART00000145005
etv5a
ets variant 5a
chr16_+_26439939 0.58 ENSDART00000143073
trim35-28
tripartite motif containing 35-28
chr5_-_26247973 0.57 ENSDART00000098527
erap1b
endoplasmic reticulum aminopeptidase 1b
chr3_+_48473346 0.56 ENSDART00000166294
metrnl
meteorin, glial cell differentiation regulator-like
chr10_-_42147318 0.56 ENSDART00000134890
dusp11
dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
chr18_+_14329231 0.56 ENSDART00000151641
zgc:173742
zgc:173742
chr10_-_1961576 0.55 ENSDART00000042441
tdgf1
teratocarcinoma-derived growth factor 1
chr18_-_38270077 0.55 ENSDART00000185546
caprin1b
cell cycle associated protein 1b
chr15_+_45591669 0.54 ENSDART00000157459
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae)
chr4_+_279669 0.54 ENSDART00000184884
CABZ01085275.1

chr5_+_51111766 0.53 ENSDART00000188552
pomt1
protein-O-mannosyltransferase 1
chr8_-_51367298 0.51 ENSDART00000060628
chmp7
charged multivesicular body protein 7
chr7_+_66884291 0.50 ENSDART00000187499
sbf2
SET binding factor 2
chr5_+_52625975 0.49 ENSDART00000170341
ENSDART00000168317
apba1a
amyloid beta (A4) precursor protein-binding, family A, member 1a
chr1_-_52201266 0.48 ENSDART00000143805
ENSDART00000023757
rab3da
RAB3D, member RAS oncogene family, a
chr8_-_5847533 0.48 ENSDART00000192489
CABZ01102147.1

chr9_+_41459759 0.47 ENSDART00000132501
ENSDART00000100265
nemp2
nuclear envelope integral membrane protein 2
chr18_-_38270596 0.46 ENSDART00000098889
caprin1b
cell cycle associated protein 1b
chr20_+_49787584 0.46 ENSDART00000193458
ENSDART00000181511
ENSDART00000185850
ENSDART00000185613
ENSDART00000191671
CABZ01078261.1

chr9_-_23765480 0.43 ENSDART00000027212
si:ch211-219a4.6
si:ch211-219a4.6
chr5_-_57723929 0.43 ENSDART00000144237
gig2p
grass carp reovirus (GCRV)-induced gene 2p
chr23_+_43668756 0.42 ENSDART00000112598
otud4
OTU deubiquitinase 4
chr7_+_22792895 0.42 ENSDART00000184407
rbm4.3
RNA binding motif protein 4.3
chr14_-_48786708 0.42 ENSDART00000169730
si:ch211-199b20.3
si:ch211-199b20.3
chr18_+_8812549 0.41 ENSDART00000017619
impdh1a
IMP (inosine 5'-monophosphate) dehydrogenase 1a
chr8_+_47897734 0.40 ENSDART00000140266
mfn2
mitofusin 2
chr7_+_54260004 0.39 ENSDART00000171909
pacsin3
protein kinase C and casein kinase substrate in neurons 3
chr3_-_37148594 0.39 ENSDART00000140855
mlx
MLX, MAX dimerization protein
chr7_+_26049818 0.38 ENSDART00000173611
si:dkey-6n21.12
si:dkey-6n21.12
chr16_-_40459104 0.37 ENSDART00000032389
plekhf2
pleckstrin homology domain containing, family F (with FYVE domain) member 2
chr8_-_19051906 0.37 ENSDART00000089024
sema6bb
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb
chr5_-_23715027 0.37 ENSDART00000139020
gbgt1l1
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
chr15_-_16384184 0.37 ENSDART00000154504
fam222bb
family with sequence similarity 222, member Bb
chr7_+_66884570 0.36 ENSDART00000082664
sbf2
SET binding factor 2
chr3_+_19336286 0.36 ENSDART00000111528
kri1
KRI1 homolog
chr22_-_11520405 0.36 ENSDART00000063157
slc26a11
solute carrier family 26 (anion exchanger), member 11
chr18_-_6534516 0.36 ENSDART00000009217
ddx11
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
chr23_-_21763598 0.36 ENSDART00000145408
vps13d
vacuolar protein sorting 13 homolog D (S. cerevisiae)
chr1_-_55058795 0.36 ENSDART00000187293
peli1a
pellino E3 ubiquitin protein ligase 1a
chr20_-_38525467 0.35 ENSDART00000061417
si:ch211-245h14.1
si:ch211-245h14.1
chr18_-_6534357 0.35 ENSDART00000192886
ddx11
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
chr14_-_14746767 0.35 ENSDART00000183755
ENSDART00000190938
ogt.1
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1
chr23_-_12906228 0.34 ENSDART00000138807
ndnl2
necdin-like 2
chr16_+_48631412 0.34 ENSDART00000154273
pbx2
pre-B-cell leukemia homeobox 2
chr22_-_36926342 0.34 ENSDART00000151804
si:dkey-37m8.11
si:dkey-37m8.11
chr10_-_45229877 0.34 ENSDART00000169281
pargl
poly (ADP-ribose) glycohydrolase, like
chr11_-_30341431 0.32 ENSDART00000078378
cflara
CASP8 and FADD-like apoptosis regulator a
chr3_+_15394428 0.32 ENSDART00000133168
atxn2l
ataxin 2-like
chr20_-_3403033 0.32 ENSDART00000092264
rev3l
REV3-like, polymerase (DNA directed), zeta, catalytic subunit
chr2_+_24374669 0.32 ENSDART00000133818
nr2f6a
nuclear receptor subfamily 2, group F, member 6a
chr7_-_30492018 0.31 ENSDART00000099639
ENSDART00000162705
ENSDART00000173663
adam10a
ADAM metallopeptidase domain 10a
chr6_+_9793791 0.31 ENSDART00000149896
als2b
amyotrophic lateral sclerosis 2b (juvenile)
chr12_+_6098713 0.31 ENSDART00000139054
sgms1
sphingomyelin synthase 1
chr6_-_45869127 0.31 ENSDART00000062459
ENSDART00000180563
rbm19
RNA binding motif protein 19
chr25_-_13553055 0.31 ENSDART00000103831
ENSDART00000139290
ano10b
anoctamin 10b
chr14_+_22397251 0.30 ENSDART00000185239
ENSDART00000124072
ENSDART00000054977
atp7a
ATPase copper transporting alpha
chr6_-_1566186 0.30 ENSDART00000156305
trim107
tripartite motif containing 107
chr6_+_42338309 0.29 ENSDART00000015277
gpx1b
glutathione peroxidase 1b
chr3_-_48612078 0.29 ENSDART00000169923
ndel1b
nudE neurodevelopment protein 1-like 1b
chr22_-_10158038 0.29 ENSDART00000047444
rbck1
RanBP-type and C3HC4-type zinc finger containing 1
chr16_-_11986321 0.29 ENSDART00000148666
ENSDART00000029121
usp5
ubiquitin specific peptidase 5 (isopeptidase T)
chr25_-_27722309 0.29 ENSDART00000148121
zgc:153935
zgc:153935
chr11_+_1584747 0.27 ENSDART00000154583
si:dkey-40c23.2
si:dkey-40c23.2
chr22_-_12862415 0.26 ENSDART00000145156
ENSDART00000137280
glsa
glutaminase a
chr6_-_1566407 0.25 ENSDART00000112118
trim107
tripartite motif containing 107
chr25_-_27722614 0.24 ENSDART00000190154
zgc:153935
zgc:153935
chr18_+_14684115 0.24 ENSDART00000108469
spata2l
spermatogenesis associated 2-like
chr23_+_39970425 0.24 ENSDART00000165376
fyco1a
FYVE and coiled-coil domain containing 1a
chr21_+_40695345 0.23 ENSDART00000143594
ccdc82
coiled-coil domain containing 82
chr5_-_31856681 0.22 ENSDART00000187817
pkn3
protein kinase N3
chr3_+_938438 0.22 ENSDART00000165671
irgf4
immunity-related GTPase family, f4
chr5_-_31857345 0.22 ENSDART00000112546
pkn3
protein kinase N3
chr22_+_32235922 0.22 ENSDART00000114531
ENSDART00000136125
rbm15b
RNA binding motif protein 15B
chr6_-_19271210 0.21 ENSDART00000163628
ENSDART00000159124
zgc:174863
zgc:174863
chr18_+_32992646 0.21 ENSDART00000172671
olfcg5
olfactory receptor C family, g5
chr17_-_28811747 0.20 ENSDART00000001444
g2e3
G2/M-phase specific E3 ubiquitin protein ligase
chr20_-_36408836 0.20 ENSDART00000076419
lbr
lamin B receptor
chr10_-_210703 0.19 ENSDART00000059476
psmg1
proteasome (prosome, macropain) assembly chaperone 1
chr20_-_31497300 0.18 ENSDART00000046841
sash1a
SAM and SH3 domain containing 1a
chr13_-_49144799 0.18 ENSDART00000030939
ENSDART00000148922
disc1
disrupted in schizophrenia 1
chr3_-_40136743 0.18 ENSDART00000149546
myo15aa
myosin XVAa
chr9_+_34334156 0.18 ENSDART00000144272
pou2f1b
POU class 2 homeobox 1b
chr5_+_36895860 0.17 ENSDART00000134493
srsf7a
serine/arginine-rich splicing factor 7a
chr17_-_35076730 0.17 ENSDART00000146590
mboat2a
membrane bound O-acyltransferase domain containing 2a
chr21_-_22635245 0.16 ENSDART00000115224
ENSDART00000101782
nectin1a
nectin cell adhesion molecule 1a
chr9_-_9960940 0.16 ENSDART00000092164
prmt2
protein arginine methyltransferase 2
chr15_+_15786160 0.16 ENSDART00000130670
ENSDART00000090939
tada2a
transcriptional adaptor 2A
chr22_+_36902352 0.15 ENSDART00000036273
trim35-20
tripartite motif containing 35-20
chr18_+_50525109 0.15 ENSDART00000098390
ubl7b
ubiquitin-like 7b (bone marrow stromal cell-derived)
chr19_+_20178978 0.15 ENSDART00000145115
ENSDART00000151175
tra2a
transformer 2 alpha homolog
chr6_-_1566581 0.14 ENSDART00000192993
trim107
tripartite motif containing 107
chr1_-_52447364 0.14 ENSDART00000140740
si:ch211-217k17.10
si:ch211-217k17.10
chr22_+_1589407 0.14 ENSDART00000175704
si:ch211-255f4.11
si:ch211-255f4.11
chr20_+_26683933 0.13 ENSDART00000139852
ENSDART00000077751
foxq1b
forkhead box Q1b
chr7_-_27696958 0.13 ENSDART00000173470
calca
calcitonin/calcitonin-related polypeptide, alpha
chr21_-_11632403 0.13 ENSDART00000171708
ENSDART00000138619
ENSDART00000136308
ENSDART00000144770
cast
calpastatin
chr19_-_11248982 0.13 ENSDART00000091237
irgf3
immunity-related GTPase family, f3
chr1_-_8141135 0.13 ENSDART00000152295
FAM83G
si:dkeyp-9d4.4
chr1_-_46989650 0.13 ENSDART00000129072
ENSDART00000150507
si:dkey-22n8.3
si:dkey-22n8.3
chr22_-_5553007 0.13 ENSDART00000165269
zgc:171601
zgc:171601
chr1_-_8000428 0.12 ENSDART00000133098
si:dkey-79f11.5
si:dkey-79f11.5
chr17_+_4578552 0.12 ENSDART00000038730
ENSDART00000182146
zmp:0000000619
zmp:0000000619
chr18_-_14901437 0.12 ENSDART00000145842
ENSDART00000008035
trabd
TraB domain containing
chr21_+_35328025 0.12 ENSDART00000136211
rars
arginyl-tRNA synthetase
chr4_+_53268458 0.12 ENSDART00000165335
si:dkey-250k10.1
si:dkey-250k10.1
chr22_-_6465060 0.11 ENSDART00000081687
zgc:172133
zgc:172133
chr8_+_22491947 0.11 ENSDART00000125805
si:ch211-261n11.8
si:ch211-261n11.8
chr17_+_27134806 0.11 ENSDART00000151901
rps6ka1
ribosomal protein S6 kinase a, polypeptide 1
chr3_-_22366032 0.10 ENSDART00000029849
ifnphi1
interferon phi 1
chr22_-_7461603 0.10 ENSDART00000170630
BX511034.6

chr7_-_1992306 0.09 ENSDART00000053660
zgc:171424
zgc:171424
chr5_-_41841675 0.09 ENSDART00000141683
si:dkey-65b12.6
si:dkey-65b12.6
chr19_+_7938121 0.09 ENSDART00000140053
ENSDART00000146649
si:dkey-266f7.5
si:dkey-266f7.5
chr4_-_76129431 0.09 ENSDART00000162809
si:ch211-106j21.2
si:ch211-106j21.2
chr22_+_5858467 0.09 ENSDART00000137295
si:dkey-222f2.7
si:dkey-222f2.7
chr4_+_43523363 0.09 ENSDART00000141093
si:dkeyp-53e4.4
si:dkeyp-53e4.4
chr4_-_51693601 0.08 ENSDART00000189025
ENSDART00000185516
ENSDART00000189576
si:dkeyp-90h9.1
si:dkeyp-90h9.1
chr7_-_2309236 0.08 ENSDART00000173356
si:dkey-187j14.8
si:dkey-187j14.8
chr4_+_33862438 0.08 ENSDART00000165044
si:dkey-28i19.3
si:dkey-28i19.3
chr15_-_8177919 0.08 ENSDART00000101463
bach1a
BTB and CNC homology 1, basic leucine zipper transcription factor 1 a
chr22_+_9994833 0.08 ENSDART00000172696
ENSDART00000192101
BX324216.1

chr10_-_7347311 0.08 ENSDART00000168885
nrg1
neuregulin 1
chr4_-_76079075 0.08 ENSDART00000158469
si:ch211-232d10.3
si:ch211-232d10.3
chr4_-_31699147 0.08 ENSDART00000187481
ENSDART00000182491
ENSDART00000187359
si:dkey-16p6.1
si:dkey-16p6.1
chr4_+_53115165 0.08 ENSDART00000157470
si:dkey-8o9.2
si:dkey-8o9.2
chr4_-_75641117 0.07 ENSDART00000182165
si:dkey-71l4.2
si:dkey-71l4.2
chr2_+_49667767 0.07 ENSDART00000191013
ENSDART00000193757
ENSDART00000187134
ENSDART00000189100
BX323861.3

chr3_-_10739625 0.07 ENSDART00000156144
zgc:112965
zgc:112965
chr4_-_76027176 0.07 ENSDART00000165718
si:dkey-71l4.1
si:dkey-71l4.1
chr4_-_42398699 0.07 ENSDART00000164183
si:ch211-59d8.2
si:ch211-59d8.2
chr1_+_524388 0.07 ENSDART00000020327
mrpl16
mitochondrial ribosomal protein L16
chr1_+_58360935 0.07 ENSDART00000140754
si:dkey-222h21.1
si:dkey-222h21.1
chr4_-_71177075 0.06 ENSDART00000185934
si:dkey-193i10.4
si:dkey-193i10.4
chr17_+_18810904 0.06 ENSDART00000130899
si:dkey-288a3.2
si:dkey-288a3.2
chr4_-_51692811 0.06 ENSDART00000159625
si:dkeyp-90h9.1
si:dkeyp-90h9.1
chr3_+_58092212 0.06 ENSDART00000156059
si:ch211-256e16.7
si:ch211-256e16.7
chr12_-_17035339 0.06 ENSDART00000152814
ifit9
interferon-induced protein with tetratricopeptide repeats 9
chr18_-_12858016 0.06 ENSDART00000130343
parp12a
poly (ADP-ribose) polymerase family, member 12a
chr4_+_71366326 0.06 ENSDART00000170807
si:ch211-76m11.8
si:ch211-76m11.8
chr4_+_29703166 0.06 ENSDART00000132876
si:ch211-214c20.1
si:ch211-214c20.1
chr4_-_75511162 0.06 ENSDART00000157651
si:dkey-71l4.5
si:dkey-71l4.5
chr3_-_7940522 0.06 ENSDART00000159710
ENSDART00000167201
trim35-25
tripartite motif containing 35-25
chr4_+_60482963 0.06 ENSDART00000157679
si:dkey-211i20.2
si:dkey-211i20.2
chr4_-_31668228 0.06 ENSDART00000161639
ENSDART00000159931
si:dkey-16p6.1
si:dkey-16p6.1
chr4_-_46915024 0.06 ENSDART00000169913
si:ch211-134c10.1
si:ch211-134c10.1
chr22_+_11520249 0.05 ENSDART00000063147
sgsh
N-sulfoglucosamine sulfohydrolase (sulfamidase)
chr3_+_1724941 0.05 ENSDART00000193402
BX321875.2

chr3_-_29688370 0.05 ENSDART00000151147
ENSDART00000151679
si:ch73-233k15.2
si:ch73-233k15.2
chr4_+_68591587 0.05 ENSDART00000189881
ENSDART00000162142
si:dkey-16p6.1
si:dkey-16p6.1
chr4_-_71153608 0.05 ENSDART00000190144
ENSDART00000158406
si:dkey-193i10.4
si:dkey-193i10.4
chr4_+_59061652 0.05 ENSDART00000150447
znf1127
zinc finger protein 1127
chr15_+_30323491 0.05 ENSDART00000048847
nos2b
nitric oxide synthase 2b, inducible
chr20_-_28638871 0.05 ENSDART00000184779
rgs6
regulator of G protein signaling 6
chr4_-_54604598 0.05 ENSDART00000160825
ENSDART00000185361
si:ch211-227e10.3
si:ch211-227e10.3
chr4_+_44713555 0.05 ENSDART00000145036
si:dkey-191j3.2
si:dkey-191j3.2
chr4_-_71177255 0.04 ENSDART00000182457
si:dkey-193i10.4
si:dkey-193i10.4
chr22_-_15693085 0.04 ENSDART00000141861
si:ch1073-396h14.1
si:ch1073-396h14.1
chr7_-_1965927 0.04 ENSDART00000053656
si:cabz01040626.2
si:cabz01040626.2
chr4_-_75869738 0.04 ENSDART00000170963
si:dkey-261j11.2
si:dkey-261j11.2
chr2_-_48539673 0.04 ENSDART00000168202
CR391991.4

chr2_+_42294944 0.04 ENSDART00000140599
ENSDART00000178811
ftr06
finTRIM family, member 6
chr13_-_298454 0.04 ENSDART00000135782
chs1
chitin synthase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of irf1a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:1901836 regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901836)
0.2 2.1 GO:0015886 heme transport(GO:0015886) iron coordination entity transport(GO:1901678)
0.2 1.1 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.2 0.6 GO:0090008 hypoblast development(GO:0090008)
0.2 1.1 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.2 0.8 GO:0030575 nuclear body organization(GO:0030575) Cajal body organization(GO:0030576)
0.1 1.5 GO:0002483 antigen processing and presentation of endogenous peptide antigen(GO:0002483) antigen processing and presentation of endogenous antigen(GO:0019883) antigen processing and presentation of endogenous peptide antigen via MHC class I(GO:0019885)
0.1 0.6 GO:0019254 carnitine metabolic process, CoA-linked(GO:0019254)
0.1 0.5 GO:0044034 viral genome replication(GO:0019079) negative stranded viral RNA replication(GO:0039689) viral RNA genome replication(GO:0039694) RNA replication(GO:0039703) multi-organism biosynthetic process(GO:0044034)
0.1 0.4 GO:2000660 regulation of interleukin-1-mediated signaling pathway(GO:2000659) negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.1 0.4 GO:0008592 regulation of Toll signaling pathway(GO:0008592)
0.1 0.3 GO:0021755 eurydendroid cell differentiation(GO:0021755)
0.1 0.4 GO:0035332 positive regulation of hippo signaling(GO:0035332)
0.1 0.3 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.4 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447)
0.1 0.3 GO:0097039 protein linear polyubiquitination(GO:0097039)
0.1 0.4 GO:0048662 regulation of smooth muscle cell proliferation(GO:0048660) negative regulation of smooth muscle cell proliferation(GO:0048662)
0.1 0.2 GO:0019062 virion attachment to host cell(GO:0019062) adhesion of symbiont to host(GO:0044406) adhesion of symbiont to host cell(GO:0044650)
0.1 0.3 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 0.6 GO:0060217 hemangioblast cell differentiation(GO:0060217)
0.1 0.4 GO:0045053 protein retention in Golgi apparatus(GO:0045053)
0.0 0.3 GO:0010269 response to selenium ion(GO:0010269)
0.0 0.3 GO:0060052 neurofilament cytoskeleton organization(GO:0060052)
0.0 0.8 GO:0035803 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0 0.2 GO:1901098 positive regulation of autophagosome maturation(GO:1901098)
0.0 0.8 GO:0090279 regulation of calcium ion import(GO:0090279)
0.0 0.7 GO:0042119 granulocyte activation(GO:0036230) neutrophil activation(GO:0042119)
0.0 1.0 GO:2000134 negative regulation of cell cycle G1/S phase transition(GO:1902807) negative regulation of G1/S transition of mitotic cell cycle(GO:2000134)
0.0 0.4 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 1.0 GO:0043486 histone exchange(GO:0043486)
0.0 1.5 GO:0006284 base-excision repair(GO:0006284)
0.0 0.3 GO:0006686 sphingomyelin biosynthetic process(GO:0006686)
0.0 1.0 GO:0055064 chloride ion homeostasis(GO:0055064)
0.0 0.5 GO:0035269 protein O-linked mannosylation(GO:0035269)
0.0 0.6 GO:0006265 DNA topological change(GO:0006265)
0.0 0.3 GO:0006543 glutamate biosynthetic process(GO:0006537) glutamine catabolic process(GO:0006543)
0.0 0.5 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.3 GO:1902042 regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902041) negative regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902042)
0.0 1.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.1 GO:0071514 genetic imprinting(GO:0071514)
0.0 0.4 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.2 GO:0035066 positive regulation of histone acetylation(GO:0035066)
0.0 0.1 GO:0097340 inhibition of cysteine-type endopeptidase activity(GO:0097340) zymogen inhibition(GO:0097341)
0.0 0.3 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.0 0.4 GO:0097320 membrane tubulation(GO:0097320)
0.0 0.8 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 1.9 GO:0017148 negative regulation of translation(GO:0017148)
0.0 0.1 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.6 GO:0030261 chromosome condensation(GO:0030261)
0.0 1.4 GO:0061640 cytoskeleton-dependent cytokinesis(GO:0061640)
0.0 0.6 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.4 GO:0008272 sulfate transport(GO:0008272)
0.0 0.4 GO:0006509 membrane protein ectodomain proteolysis(GO:0006509)
0.0 0.1 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.5 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:0000812 Swr1 complex(GO:0000812)
0.1 0.6 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 1.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.8 GO:0015030 Cajal body(GO:0015030)
0.0 1.4 GO:0031105 septin ring(GO:0005940) septin complex(GO:0031105) septin cytoskeleton(GO:0032156)
0.0 0.5 GO:0000815 ESCRT III complex(GO:0000815)
0.0 1.0 GO:0031594 neuromuscular junction(GO:0031594)
0.0 1.1 GO:0030496 midbody(GO:0030496)
0.0 0.3 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.2 GO:0071797 LUBAC complex(GO:0071797)
0.0 0.7 GO:0005637 nuclear inner membrane(GO:0005637)
0.0 0.5 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.8 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.4 GO:0030686 90S preribosome(GO:0030686)
0.0 1.6 GO:0014069 postsynaptic density(GO:0014069)
0.0 1.2 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.1 GO:0015232 heme transporter activity(GO:0015232)
0.2 1.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.2 0.6 GO:0004092 carnitine O-acetyltransferase activity(GO:0004092)
0.2 0.8 GO:0030620 U2 snRNA binding(GO:0030620)
0.1 0.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.1 0.4 GO:0032184 SUMO polymer binding(GO:0032184)
0.1 0.6 GO:0098518 polynucleotide phosphatase activity(GO:0098518)
0.1 0.3 GO:1902945 metalloendopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902945)
0.1 1.5 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 0.3 GO:0004649 poly(ADP-ribose) glycohydrolase activity(GO:0004649)
0.1 0.4 GO:0003938 IMP dehydrogenase activity(GO:0003938)
0.1 0.3 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 0.3 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262) protein O-GlcNAc transferase activity(GO:0097363)
0.1 1.7 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 0.3 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.0 0.8 GO:0032190 acrosin binding(GO:0032190)
0.0 0.6 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.6 GO:0070697 activin receptor binding(GO:0070697)
0.0 0.5 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.9 GO:0015377 cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379)
0.0 0.3 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.1 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.0 0.4 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.0 0.8 GO:0004629 phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629)
0.0 0.7 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.3 GO:0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097199)
0.0 0.1 GO:0010859 calcium-dependent cysteine-type endopeptidase inhibitor activity(GO:0010859)
0.0 0.4 GO:0008271 secondary active sulfate transmembrane transporter activity(GO:0008271)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 1.2 GO:0019208 phosphatase regulator activity(GO:0019208)
0.0 0.6 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 1.0 GO:0019902 phosphatase binding(GO:0019902)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.0 1.1 PID HDAC CLASSIII PATHWAY Signaling events mediated by HDAC Class III
0.0 0.6 PID GLYPICAN 1PATHWAY Glypican 1 network
0.0 0.6 PID ARF6 PATHWAY Arf6 signaling events
0.0 0.6 PID ARF 3PATHWAY Arf1 pathway
0.0 1.0 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 REACTOME ETHANOL OXIDATION Genes involved in Ethanol oxidation
0.1 0.6 REACTOME INTEGRATION OF PROVIRUS Genes involved in Integration of provirus
0.1 0.8 REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.1 1.1 REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS Genes involved in Ionotropic activity of Kainate Receptors
0.1 0.6 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 1.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.6 REACTOME SIGNALING BY NODAL Genes involved in Signaling by NODAL
0.0 1.9 REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0 0.7 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling
0.0 0.5 REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.0 0.6 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.3 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis