PRJNA438478: RNAseq of wild type zebrafish germline
Gene Symbol | Gene ID | Gene Info |
---|---|---|
mafaa
|
ENSDARG00000044155 | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Aa |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
mafaa | dr11_v1_chr6_-_32703317_32703317 | -0.77 | 2.1e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_19596214 | 0.85 |
ENSDART00000183110
|
CABZ01059626.1
|
|
chr5_-_33230794 | 0.47 |
ENSDART00000144273
|
kank1b
|
KN motif and ankyrin repeat domains 1b |
chr6_-_33913184 | 0.41 |
ENSDART00000146373
|
nasp
|
nuclear autoantigenic sperm protein (histone-binding) |
chr12_+_30789611 | 0.36 |
ENSDART00000181501
|
aldh18a1
|
aldehyde dehydrogenase 18 family, member A1 |
chr7_+_27603211 | 0.33 |
ENSDART00000148782
|
cyp2r1
|
cytochrome P450, family 2, subfamily R, polypeptide 1 |
chr21_-_17037907 | 0.25 |
ENSDART00000101263
|
ube2g1b
|
ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) |
chr17_-_20202725 | 0.25 |
ENSDART00000133650
|
ecd
|
ecdysoneless homolog (Drosophila) |
chr9_-_1639884 | 0.22 |
ENSDART00000062850
ENSDART00000150947 |
agps
|
alkylglycerone phosphate synthase |
chr22_+_5574952 | 0.21 |
ENSDART00000171774
|
zgc:171566
|
zgc:171566 |
chr13_-_50463938 | 0.18 |
ENSDART00000083857
|
ccnj
|
cyclin J |
chr5_-_23795688 | 0.17 |
ENSDART00000099084
|
gbgt1l4
|
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 |
chr19_-_48010490 | 0.16 |
ENSDART00000159938
|
FBXL19
|
zgc:158376 |
chr15_-_17138640 | 0.15 |
ENSDART00000080777
|
mrpl28
|
mitochondrial ribosomal protein L28 |
chr7_-_40578733 | 0.14 |
ENSDART00000173926
ENSDART00000010035 |
dnajb6b
|
DnaJ (Hsp40) homolog, subfamily B, member 6b |
chr24_-_38079261 | 0.14 |
ENSDART00000105662
|
crp1
|
C-reactive protein 1 |
chr1_-_26045007 | 0.14 |
ENSDART00000129259
|
gpank1
|
G patch domain and ankyrin repeats 1 |
chr5_-_5326010 | 0.14 |
ENSDART00000161946
|
pbx3a
|
pre-B-cell leukemia homeobox 3a |
chr2_-_57707039 | 0.13 |
ENSDART00000097685
|
CABZ01060891.1
|
|
chr25_+_3217419 | 0.12 |
ENSDART00000104859
|
rccd1
|
RCC1 domain containing 1 |
chr2_-_37465517 | 0.12 |
ENSDART00000139983
|
si:dkey-57k2.6
|
si:dkey-57k2.6 |
chr25_-_4235037 | 0.12 |
ENSDART00000093003
|
syt7a
|
synaptotagmin VIIa |
chr21_-_1642739 | 0.11 |
ENSDART00000151118
|
zgc:152948
|
zgc:152948 |
chr4_-_14486822 | 0.11 |
ENSDART00000048821
|
plxnb2a
|
plexin b2a |
chr24_+_37709191 | 0.11 |
ENSDART00000066558
|
decr2
|
2,4-dienoyl CoA reductase 2, peroxisomal |
chr8_-_21071711 | 0.10 |
ENSDART00000111600
ENSDART00000135204 ENSDART00000131371 ENSDART00000146532 ENSDART00000137606 |
zgc:112962
|
zgc:112962 |
chr8_-_21071476 | 0.10 |
ENSDART00000184184
ENSDART00000100288 |
zgc:112962
|
zgc:112962 |
chr10_-_2788668 | 0.10 |
ENSDART00000131749
ENSDART00000124356 ENSDART00000085031 |
ash2l
|
ash2 (absent, small, or homeotic)-like (Drosophila) |
chr4_-_58448785 | 0.09 |
ENSDART00000172359
|
si:ch211-212k5.3
|
si:ch211-212k5.3 |
chr6_+_42475730 | 0.09 |
ENSDART00000150226
|
mst1ra
|
macrophage stimulating 1 receptor a |
chr12_-_19119176 | 0.08 |
ENSDART00000149180
|
aco2
|
aconitase 2, mitochondrial |
chr14_-_30490763 | 0.08 |
ENSDART00000193166
ENSDART00000183471 ENSDART00000087859 |
micu3b
|
mitochondrial calcium uptake family, member 3b |
chr6_-_25371196 | 0.08 |
ENSDART00000187291
|
PKN2 (1 of many)
|
zgc:153916 |
chr17_-_14966384 | 0.08 |
ENSDART00000105064
|
txndc16
|
thioredoxin domain containing 16 |
chr24_+_80653 | 0.08 |
ENSDART00000158473
ENSDART00000129135 |
reck
|
reversion-inducing-cysteine-rich protein with kazal motifs |
chr6_-_13709591 | 0.08 |
ENSDART00000151771
|
chpfb
|
chondroitin polymerizing factor b |
chr7_-_7493758 | 0.07 |
ENSDART00000036703
|
pfdn2
|
prefoldin subunit 2 |
chr11_+_12719944 | 0.07 |
ENSDART00000054837
ENSDART00000144954 |
ap1s2
|
adaptor-related protein complex 1, sigma 2 subunit |
chr20_+_54323218 | 0.07 |
ENSDART00000191096
|
CABZ01077555.1
|
|
chr12_+_12789853 | 0.07 |
ENSDART00000064839
|
grid1b
|
glutamate receptor, ionotropic, delta 1b |
chr16_-_27676123 | 0.06 |
ENSDART00000180804
|
tbrg4
|
transforming growth factor beta regulator 4 |
chr25_+_459901 | 0.06 |
ENSDART00000154895
|
prtgb
|
protogenin homolog b (Gallus gallus) |
chr25_-_24240797 | 0.05 |
ENSDART00000132790
|
spty2d1
|
SPT2 chromatin protein domain containing 1 |
chr19_-_3777217 | 0.05 |
ENSDART00000160510
|
si:dkey-206d17.15
|
si:dkey-206d17.15 |
chr1_+_52392511 | 0.05 |
ENSDART00000144025
|
si:ch211-217k17.8
|
si:ch211-217k17.8 |
chr11_+_6115621 | 0.05 |
ENSDART00000165031
ENSDART00000027666 ENSDART00000161458 |
nr2f6b
|
nuclear receptor subfamily 2, group F, member 6b |
chr20_-_14321359 | 0.04 |
ENSDART00000145104
|
dlgap2b
|
discs, large (Drosophila) homolog-associated protein 2b |
chr7_+_41421998 | 0.04 |
ENSDART00000083967
|
chpf2
|
chondroitin polymerizing factor 2 |
chr16_+_42465518 | 0.04 |
ENSDART00000058699
|
si:ch211-215k15.4
|
si:ch211-215k15.4 |
chr16_+_4658250 | 0.04 |
ENSDART00000006212
|
LIN28A
|
si:ch1073-284b18.2 |
chr13_-_28272299 | 0.04 |
ENSDART00000006393
|
tlx1
|
T cell leukemia homeobox 1 |
chr16_+_1353894 | 0.04 |
ENSDART00000148426
|
celf3b
|
cugbp, Elav-like family member 3b |
chr5_-_35137365 | 0.04 |
ENSDART00000141218
|
fcho2
|
FCH domain only 2 |
chr3_-_10677890 | 0.04 |
ENSDART00000155382
ENSDART00000171319 |
si:ch1073-144j5.2
|
si:ch1073-144j5.2 |
chr18_+_33591704 | 0.04 |
ENSDART00000185631
ENSDART00000057845 |
si:dkey-47k20.5
|
si:dkey-47k20.5 |
chr8_+_9699111 | 0.03 |
ENSDART00000111853
|
gripap1
|
GRIP1 associated protein 1 |
chr5_+_51102010 | 0.03 |
ENSDART00000110377
|
zgc:194398
|
zgc:194398 |
chr23_+_3538463 | 0.03 |
ENSDART00000172758
|
si:dkey-9l20.3
|
si:dkey-9l20.3 |
chr22_-_27709692 | 0.03 |
ENSDART00000172458
|
CR547131.1
|
|
chr12_+_40905427 | 0.03 |
ENSDART00000170526
ENSDART00000185771 ENSDART00000193945 |
CDH18
|
cadherin 18 |
chr15_+_26940569 | 0.03 |
ENSDART00000189636
ENSDART00000077172 |
bcas3
|
breast carcinoma amplified sequence 3 |
chr23_+_12916062 | 0.03 |
ENSDART00000144268
|
si:dkey-150i13.2
|
si:dkey-150i13.2 |
chr4_+_19700308 | 0.03 |
ENSDART00000027919
|
pax4
|
paired box 4 |
chr4_+_9911534 | 0.03 |
ENSDART00000109452
|
sbf1
|
SET binding factor 1 |
chr1_-_16676177 | 0.03 |
ENSDART00000159038
|
frg1
|
FSHD region gene 1 |
chr8_-_14052349 | 0.02 |
ENSDART00000135811
|
atp2b3a
|
ATPase plasma membrane Ca2+ transporting 3a |
chr25_-_27842654 | 0.02 |
ENSDART00000154852
ENSDART00000156906 |
asb15a
|
ankyrin repeat and SOCS box containing 15a |
chr24_+_6353394 | 0.02 |
ENSDART00000165118
|
CR352329.1
|
|
chr3_-_62417677 | 0.02 |
ENSDART00000101888
|
sstr2b
|
somatostatin receptor 2b |
chr13_+_6295173 | 0.02 |
ENSDART00000163855
|
angpt2a
|
angiopoietin 2a |
chr4_-_50926767 | 0.02 |
ENSDART00000183430
|
si:ch211-208f21.3
|
si:ch211-208f21.3 |
chr1_+_59090583 | 0.02 |
ENSDART00000150658
|
mfap4
|
microfibril associated protein 4 |
chr15_-_18432673 | 0.02 |
ENSDART00000146853
|
ncam1b
|
neural cell adhesion molecule 1b |
chr13_+_4671698 | 0.02 |
ENSDART00000164617
ENSDART00000128494 ENSDART00000165776 |
pla2g12b
|
phospholipase A2, group XIIB |
chr8_-_3336273 | 0.01 |
ENSDART00000081160
|
zgc:173737
|
zgc:173737 |
chr16_-_46567344 | 0.01 |
ENSDART00000127721
|
si:dkey-152b24.7
|
si:dkey-152b24.7 |
chr6_-_131401 | 0.01 |
ENSDART00000151251
|
LRRC8E
|
si:zfos-323e3.4 |
chr3_-_1388936 | 0.01 |
ENSDART00000171278
|
ddx47
|
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 |
chr11_+_25276748 | 0.01 |
ENSDART00000126211
|
cyldb
|
cylindromatosis (turban tumor syndrome), b |
chr13_-_301309 | 0.01 |
ENSDART00000131747
|
chs1
|
chitin synthase 1 |
chr1_+_59090743 | 0.01 |
ENSDART00000100199
|
mfap4
|
microfibril associated protein 4 |
chr25_-_3217115 | 0.01 |
ENSDART00000032390
|
gtf2h1
|
general transcription factor IIH, polypeptide 1 |
chr22_-_775776 | 0.01 |
ENSDART00000149749
|
rbbp5
|
retinoblastoma binding protein 5 |
chr3_-_34055745 | 0.00 |
ENSDART00000151652
|
ighv2-2
|
immunoglobulin heavy variable 2-2 |
chr1_+_59090972 | 0.00 |
ENSDART00000171497
|
mfap4
|
microfibril associated protein 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0034723 | DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723) |
0.1 | 0.2 | GO:0008611 | ether lipid biosynthetic process(GO:0008611) glycerol ether biosynthetic process(GO:0046504) cellular lipid biosynthetic process(GO:0097384) ether biosynthetic process(GO:1901503) |
0.1 | 0.3 | GO:0070640 | vitamin D3 metabolic process(GO:0070640) cellular response to vitamin D(GO:0071305) |
0.1 | 0.2 | GO:0046900 | tetrahydrofolylpolyglutamate metabolic process(GO:0046900) |
0.0 | 0.4 | GO:0055129 | proline biosynthetic process(GO:0006561) L-proline biosynthetic process(GO:0055129) |
0.0 | 0.1 | GO:1903573 | negative regulation of response to endoplasmic reticulum stress(GO:1903573) |
0.0 | 0.1 | GO:1905048 | regulation of metallopeptidase activity(GO:1905048) |
0.0 | 0.1 | GO:0015074 | DNA integration(GO:0015074) |
0.0 | 0.1 | GO:0010847 | regulation of chromatin assembly(GO:0010847) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:1990909 | Wnt signalosome(GO:1990909) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor(GO:0016774) |
0.0 | 0.1 | GO:0003994 | aconitate hydratase activity(GO:0003994) |
0.0 | 0.1 | GO:0047238 | glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238) |
0.0 | 0.2 | GO:0008242 | omega peptidase activity(GO:0008242) |
0.0 | 0.1 | GO:0001042 | RNA polymerase I core binding(GO:0001042) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.0 | 0.3 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |