PRJNA438478: RNAseq of wild type zebrafish germline
Gene Symbol | Gene ID | Gene Info |
---|---|---|
msx1b
|
ENSDARG00000008886 | muscle segment homeobox 1b |
msx3
|
ENSDARG00000015674 | muscle segment homeobox 3 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
msx3 | dr11_v1_chr13_+_24662238_24662238 | -0.83 | 2.2e-05 | Click! |
msx1b | dr11_v1_chr1_+_49352900_49352900 | -0.29 | 2.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr24_-_9979342 | 3.20 |
ENSDART00000138576
ENSDART00000191206 |
zgc:171977
|
zgc:171977 |
chr12_-_33357655 | 2.64 |
ENSDART00000066233
ENSDART00000148165 |
slc16a3
|
solute carrier family 16 (monocarboxylate transporter), member 3 |
chr5_-_29512538 | 2.33 |
ENSDART00000098364
|
ehmt1a
|
euchromatic histone-lysine N-methyltransferase 1a |
chr5_+_29794058 | 2.15 |
ENSDART00000045410
|
thy1
|
Thy-1 cell surface antigen |
chr17_-_50071748 | 2.05 |
ENSDART00000075188
|
zgc:113886
|
zgc:113886 |
chr2_+_6253246 | 2.04 |
ENSDART00000058256
ENSDART00000076700 |
zp3b
|
zona pellucida glycoprotein 3b |
chr19_-_8768564 | 1.77 |
ENSDART00000170416
|
si:ch73-350k19.1
|
si:ch73-350k19.1 |
chr9_-_35633827 | 1.56 |
ENSDART00000077745
|
zp2l1
|
zona pellucida glycoprotein 2, like 1 |
chr14_+_34490445 | 1.46 |
ENSDART00000132193
ENSDART00000148044 |
wnt8a
|
wingless-type MMTV integration site family, member 8a |
chr15_+_46344655 | 1.44 |
ENSDART00000155893
|
si:ch1073-340i21.2
|
si:ch1073-340i21.2 |
chr19_-_18127808 | 1.31 |
ENSDART00000108627
|
snx10a
|
sorting nexin 10a |
chr22_-_21150845 | 1.23 |
ENSDART00000027345
|
tmem59l
|
transmembrane protein 59-like |
chr3_-_26191960 | 1.20 |
ENSDART00000113843
|
ypel3
|
yippee-like 3 |
chr19_-_18127629 | 1.18 |
ENSDART00000187722
|
snx10a
|
sorting nexin 10a |
chr3_+_32663865 | 1.08 |
ENSDART00000190240
|
si:dkey-16l2.16
|
si:dkey-16l2.16 |
chr4_-_77260727 | 1.05 |
ENSDART00000075770
|
zgc:162948
|
zgc:162948 |
chr9_-_32343673 | 1.05 |
ENSDART00000078499
|
rftn2
|
raftlin family member 2 |
chr5_-_31926906 | 1.00 |
ENSDART00000187340
|
ssh1b
|
slingshot protein phosphatase 1b |
chr16_-_41714988 | 0.98 |
ENSDART00000138798
|
cep85
|
centrosomal protein 85 |
chr4_+_4849789 | 0.98 |
ENSDART00000130818
ENSDART00000127751 |
ptprz1b
|
protein tyrosine phosphatase, receptor-type, Z polypeptide 1b |
chr8_-_15129573 | 0.97 |
ENSDART00000142358
|
bcar3
|
BCAR3, NSP family adaptor protein |
chr17_-_6618574 | 0.95 |
ENSDART00000184486
|
si:ch211-189e2.3
|
si:ch211-189e2.3 |
chr6_-_9695294 | 0.93 |
ENSDART00000162728
|
nop58
|
NOP58 ribonucleoprotein homolog (yeast) |
chr10_+_17235370 | 0.87 |
ENSDART00000038780
|
sppl3
|
signal peptide peptidase 3 |
chr20_-_51831816 | 0.85 |
ENSDART00000060505
|
mia3
|
melanoma inhibitory activity family, member 3 |
chr5_+_872299 | 0.83 |
ENSDART00000130042
|
fubp3
|
far upstream element (FUSE) binding protein 3 |
chr11_-_40457325 | 0.82 |
ENSDART00000128442
|
tnfrsf1b
|
tumor necrosis factor receptor superfamily, member 1B |
chr10_-_44560165 | 0.82 |
ENSDART00000181217
ENSDART00000076084 |
npm2b
|
nucleophosmin/nucleoplasmin, 2b |
chr21_+_15592426 | 0.80 |
ENSDART00000138207
|
smarcb1b
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b |
chr7_+_59677273 | 0.77 |
ENSDART00000039535
ENSDART00000132044 |
trmt44
|
tRNA methyltransferase 44 homolog |
chr22_-_26274177 | 0.77 |
ENSDART00000060978
|
wdr83
|
WD repeat domain containing 83 |
chr24_-_25144441 | 0.76 |
ENSDART00000152104
|
phldb2b
|
pleckstrin homology-like domain, family B, member 2b |
chr19_-_19871211 | 0.76 |
ENSDART00000170980
|
evx1
|
even-skipped homeobox 1 |
chr24_-_7957581 | 0.72 |
ENSDART00000145815
|
txndc5
|
thioredoxin domain containing 5 |
chr5_+_9224051 | 0.72 |
ENSDART00000139265
|
si:ch211-12e13.12
|
si:ch211-12e13.12 |
chr21_-_38730557 | 0.72 |
ENSDART00000150984
ENSDART00000111885 |
taf9
|
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor |
chr24_-_25004553 | 0.70 |
ENSDART00000080997
ENSDART00000136860 |
zdhhc20b
|
zinc finger, DHHC-type containing 20b |
chr25_+_14697247 | 0.70 |
ENSDART00000180747
|
mpped2
|
metallophosphoesterase domain containing 2b |
chr11_+_2855430 | 0.63 |
ENSDART00000172837
|
kif21b
|
kinesin family member 21B |
chr11_+_31864921 | 0.62 |
ENSDART00000180252
|
diaph3
|
diaphanous-related formin 3 |
chr22_+_2769236 | 0.60 |
ENSDART00000141836
|
si:dkey-20i20.10
|
si:dkey-20i20.10 |
chr23_-_42876596 | 0.57 |
ENSDART00000086156
|
dlgap4a
|
discs, large (Drosophila) homolog-associated protein 4a |
chr19_+_1673599 | 0.57 |
ENSDART00000163127
|
klhl7
|
kelch-like family member 7 |
chr5_+_19933356 | 0.50 |
ENSDART00000088819
|
ankrd13a
|
ankyrin repeat domain 13A |
chr20_+_28803977 | 0.49 |
ENSDART00000153351
ENSDART00000038149 |
fntb
|
farnesyltransferase, CAAX box, beta |
chr25_-_13558172 | 0.46 |
ENSDART00000139970
ENSDART00000133789 ENSDART00000144426 |
ano10b
|
anoctamin 10b |
chr5_-_68093169 | 0.46 |
ENSDART00000051849
|
slc25a11
|
solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 |
chr16_+_33144306 | 0.45 |
ENSDART00000101953
|
rhbdl2
|
rhomboid, veinlet-like 2 (Drosophila) |
chr16_+_20161805 | 0.44 |
ENSDART00000192146
|
c16h2orf66
|
chromosome 16 C2orf66 homolog |
chr23_+_44427188 | 0.44 |
ENSDART00000160207
|
eif4e2rs1
|
eukaryotic translation initiation factor 4E family member 2 related sequence 1 |
chr3_-_31715714 | 0.44 |
ENSDART00000051542
|
ccdc47
|
coiled-coil domain containing 47 |
chr3_-_31716157 | 0.42 |
ENSDART00000193189
|
ccdc47
|
coiled-coil domain containing 47 |
chr9_-_16133263 | 0.41 |
ENSDART00000077187
|
myo1b
|
myosin IB |
chr9_+_18829360 | 0.40 |
ENSDART00000006514
|
gtf2f2b
|
general transcription factor IIF, polypeptide 2b |
chr13_-_9213207 | 0.40 |
ENSDART00000139861
ENSDART00000140524 |
HTRA2 (1 of many)
|
si:dkey-33c12.11 |
chr17_-_35279422 | 0.40 |
ENSDART00000181587
|
adam17a
|
ADAM metallopeptidase domain 17a |
chr25_+_34748860 | 0.39 |
ENSDART00000087364
|
wwp2
|
WW domain containing E3 ubiquitin protein ligase 2 |
chr20_+_46040666 | 0.37 |
ENSDART00000060744
|
si:dkey-7c18.24
|
si:dkey-7c18.24 |
chr18_+_50890749 | 0.36 |
ENSDART00000174109
|
si:ch1073-450f2.1
|
si:ch1073-450f2.1 |
chr2_+_30032303 | 0.36 |
ENSDART00000151841
|
rbm33b
|
RNA binding motif protein 33b |
chr10_-_13343831 | 0.35 |
ENSDART00000135941
|
il11ra
|
interleukin 11 receptor, alpha |
chr20_-_9436521 | 0.32 |
ENSDART00000133000
|
zgc:101840
|
zgc:101840 |
chr4_-_12997348 | 0.32 |
ENSDART00000171451
|
si:dkey-6a5.3
|
si:dkey-6a5.3 |
chr14_+_50937757 | 0.30 |
ENSDART00000163865
|
rnf44
|
ring finger protein 44 |
chr16_+_33144112 | 0.30 |
ENSDART00000183149
|
rhbdl2
|
rhomboid, veinlet-like 2 (Drosophila) |
chr1_+_55730205 | 0.28 |
ENSDART00000148075
|
adgre10
|
adhesion G protein-coupled receptor E10 |
chr18_+_26895994 | 0.27 |
ENSDART00000098347
|
ch25hl1.2
|
cholesterol 25-hydroxylase like 1, tandem duplicate 2 |
chr20_-_45060241 | 0.26 |
ENSDART00000185227
|
klhl29
|
kelch-like family member 29 |
chr14_+_6535426 | 0.26 |
ENSDART00000055961
|
thg1l
|
tRNA-histidine guanylyltransferase 1-like |
chr13_+_35955562 | 0.25 |
ENSDART00000137377
|
si:ch211-67f13.7
|
si:ch211-67f13.7 |
chr13_+_9521629 | 0.25 |
ENSDART00000149870
ENSDART00000137666 |
si:dkey-19p15.4
|
si:dkey-19p15.4 |
chr13_-_9045879 | 0.25 |
ENSDART00000155463
ENSDART00000140041 ENSDART00000137454 |
si:dkey-112g5.11
|
si:dkey-112g5.11 |
chr13_+_9468535 | 0.24 |
ENSDART00000135088
ENSDART00000164270 ENSDART00000099619 ENSDART00000164656 |
HTRA2 (1 of many)
|
si:dkey-265c15.6 |
chr13_+_18321140 | 0.24 |
ENSDART00000180947
|
eif4e1c
|
eukaryotic translation initiation factor 4E family member 1c |
chr14_+_36521005 | 0.23 |
ENSDART00000192286
|
TENM3
|
si:dkey-237h12.3 |
chr19_+_9212031 | 0.23 |
ENSDART00000052930
|
ndufv1
|
NADH dehydrogenase (ubiquinone) flavoprotein 1 |
chr16_+_41171949 | 0.22 |
ENSDART00000135294
|
nek11
|
NIMA-related kinase 11 |
chr8_+_18555559 | 0.22 |
ENSDART00000149523
|
tab3
|
TGF-beta activated kinase 1/MAP3K7 binding protein 3 |
chr19_+_8985230 | 0.22 |
ENSDART00000018973
|
scamp3
|
secretory carrier membrane protein 3 |
chr9_+_35832294 | 0.22 |
ENSDART00000130549
ENSDART00000122169 |
si:dkey-67c22.2
|
si:dkey-67c22.2 |
chr4_-_14185225 | 0.22 |
ENSDART00000147061
|
si:dkey-234l24.8
|
si:dkey-234l24.8 |
chr14_+_20918701 | 0.21 |
ENSDART00000144736
ENSDART00000148204 |
zgc:66433
|
zgc:66433 |
chr17_-_6514962 | 0.21 |
ENSDART00000163514
|
dnajc5gb
|
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b |
chr13_-_9159852 | 0.21 |
ENSDART00000170185
ENSDART00000158697 ENSDART00000143393 ENSDART00000164973 ENSDART00000159910 |
HTRA2 (1 of many)
|
si:dkey-112g5.16 |
chr18_+_43891051 | 0.20 |
ENSDART00000024213
|
cxcr5
|
chemokine (C-X-C motif) receptor 5 |
chr16_-_18960613 | 0.19 |
ENSDART00000183197
|
fhod3b
|
formin homology 2 domain containing 3b |
chr17_-_2834764 | 0.17 |
ENSDART00000024027
|
bdkrb1
|
bradykinin receptor B1 |
chr1_-_48615105 | 0.17 |
ENSDART00000189744
|
LO017711.1
|
|
chr15_-_25518084 | 0.16 |
ENSDART00000158594
|
hif1al
|
hypoxia-inducible factor 1, alpha subunit, like |
chr2_-_3678029 | 0.15 |
ENSDART00000146861
|
mmp16b
|
matrix metallopeptidase 16b (membrane-inserted) |
chr20_-_19511016 | 0.14 |
ENSDART00000168521
|
snx17
|
sorting nexin 17 |
chr15_-_37620167 | 0.14 |
ENSDART00000059582
|
si:ch211-137j23.8
|
si:ch211-137j23.8 |
chr3_+_23692462 | 0.14 |
ENSDART00000145934
|
hoxb7a
|
homeobox B7a |
chr15_-_37683768 | 0.13 |
ENSDART00000059609
|
si:dkey-117a8.3
|
si:dkey-117a8.3 |
chr7_-_8324927 | 0.13 |
ENSDART00000102535
|
f13a1b
|
coagulation factor XIII, A1 polypeptide b |
chr25_+_16116740 | 0.12 |
ENSDART00000139778
|
far1
|
fatty acyl CoA reductase 1 |
chr15_-_37673733 | 0.12 |
ENSDART00000154513
|
si:dkey-117a8.4
|
si:dkey-117a8.4 |
chr21_-_20328375 | 0.12 |
ENSDART00000079593
|
slc26a1
|
solute carrier family 26 (anion exchanger), member 1 |
chr22_+_5532003 | 0.11 |
ENSDART00000106174
|
si:ch73-256j6.2
|
si:ch73-256j6.2 |
chr13_+_23282549 | 0.11 |
ENSDART00000101134
|
khdrbs2
|
KH domain containing, RNA binding, signal transduction associated 2 |
chr25_+_6471401 | 0.11 |
ENSDART00000132927
|
snx33
|
sorting nexin 33 |
chr16_+_35595312 | 0.10 |
ENSDART00000170438
|
si:ch211-1i11.3
|
si:ch211-1i11.3 |
chr15_-_14212777 | 0.10 |
ENSDART00000165572
|
CR925813.1
|
|
chr4_-_75681004 | 0.10 |
ENSDART00000186296
|
si:dkey-71l4.5
|
si:dkey-71l4.5 |
chr22_+_9761930 | 0.10 |
ENSDART00000181107
|
BX664625.5
|
|
chr18_+_44630415 | 0.10 |
ENSDART00000098540
|
bicra
|
BRD4 interacting chromatin remodeling complex associated protein |
chr1_+_29068654 | 0.10 |
ENSDART00000053932
|
cbsa
|
cystathionine-beta-synthase a |
chr15_-_19051152 | 0.10 |
ENSDART00000186453
|
arhgap32a
|
Rho GTPase activating protein 32a |
chr1_+_40801448 | 0.08 |
ENSDART00000187394
|
cpz
|
carboxypeptidase Z |
chr21_-_23503032 | 0.08 |
ENSDART00000101117
|
ncam1a
|
neural cell adhesion molecule 1a |
chr22_+_9114416 | 0.08 |
ENSDART00000190169
|
nlrp15
|
NACHT, LRR and PYD domains-containing protein 15 |
chr11_-_11910225 | 0.07 |
ENSDART00000159922
|
si:ch211-69b7.6
|
si:ch211-69b7.6 |
chr24_+_22485710 | 0.07 |
ENSDART00000146058
|
si:dkey-40h20.1
|
si:dkey-40h20.1 |
chr4_+_19700308 | 0.07 |
ENSDART00000027919
|
pax4
|
paired box 4 |
chr15_-_37719015 | 0.07 |
ENSDART00000154875
|
si:dkey-117a8.1
|
si:dkey-117a8.1 |
chr5_+_7564644 | 0.07 |
ENSDART00000192173
|
CABZ01039096.1
|
|
chr23_+_18527028 | 0.07 |
ENSDART00000190263
ENSDART00000104545 |
avpr2ab
|
arginine vasopressin receptor 2a, duplicate b |
chr10_+_36194527 | 0.06 |
ENSDART00000076810
|
or108-1
|
odorant receptor, family D, subfamily 108, member 1 |
chr13_+_15701596 | 0.06 |
ENSDART00000130832
|
trmt61a
|
tRNA methyltransferase 61A |
chr21_-_37973081 | 0.06 |
ENSDART00000136569
|
ripply1
|
ripply transcriptional repressor 1 |
chr9_+_12444494 | 0.06 |
ENSDART00000102430
|
tmem41aa
|
transmembrane protein 41aa |
chr15_-_37767901 | 0.06 |
ENSDART00000154763
|
si:dkey-42l23.4
|
si:dkey-42l23.4 |
chr16_-_26855936 | 0.06 |
ENSDART00000167320
ENSDART00000078119 |
ino80c
|
INO80 complex subunit C |
chr12_+_3078221 | 0.05 |
ENSDART00000148835
ENSDART00000149427 |
sgca
|
sarcoglycan, alpha |
chr4_-_14162327 | 0.05 |
ENSDART00000138656
|
si:dkey-234l24.1
|
si:dkey-234l24.1 |
chr14_-_1543834 | 0.05 |
ENSDART00000185876
|
CABZ01109480.1
|
|
chr1_-_7975755 | 0.04 |
ENSDART00000141765
|
si:dkey-79f11.7
|
si:dkey-79f11.7 |
chr25_+_19666621 | 0.04 |
ENSDART00000112746
|
zgc:171459
|
zgc:171459 |
chr1_-_25966068 | 0.04 |
ENSDART00000137869
ENSDART00000134192 |
synpo2b
|
synaptopodin 2b |
chr18_+_34225520 | 0.04 |
ENSDART00000126115
|
v2rl1
|
vomeronasal 2 receptor, l1 |
chr4_-_42408339 | 0.03 |
ENSDART00000172612
|
si:ch211-59d8.3
|
si:ch211-59d8.3 |
chr2_+_50608099 | 0.03 |
ENSDART00000185805
ENSDART00000111135 |
neurod6b
|
neuronal differentiation 6b |
chr17_+_24821627 | 0.03 |
ENSDART00000112389
|
wdr43
|
WD repeat domain 43 |
chr17_+_24851951 | 0.03 |
ENSDART00000180746
|
cx35.4
|
connexin 35.4 |
chr17_+_41081977 | 0.03 |
ENSDART00000137091
ENSDART00000143714 |
babam2
|
BRISC and BRCA1 A complex member 2 |
chr8_-_7567815 | 0.02 |
ENSDART00000132536
|
hcfc1b
|
host cell factor C1b |
chr1_+_40801696 | 0.02 |
ENSDART00000147497
|
cpz
|
carboxypeptidase Z |
chr17_+_41081512 | 0.02 |
ENSDART00000056742
|
babam2
|
BRISC and BRCA1 A complex member 2 |
chr24_+_20373605 | 0.02 |
ENSDART00000112349
|
plcd1a
|
phospholipase C, delta 1a |
chr4_-_14173138 | 0.02 |
ENSDART00000142487
|
si:dkey-234l24.7
|
si:dkey-234l24.7 |
chr4_+_54519511 | 0.01 |
ENSDART00000161653
|
znf974
|
zinc finger protein 974 |
chr5_+_27897504 | 0.01 |
ENSDART00000130936
|
adam28
|
ADAM metallopeptidase domain 28 |
chr6_+_52877147 | 0.01 |
ENSDART00000174370
|
or137-8
|
odorant receptor, family H, subfamily 137, member 8 |
chr8_-_45838277 | 0.01 |
ENSDART00000046064
|
ogdha
|
oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) |
chr18_-_46380471 | 0.00 |
ENSDART00000144444
ENSDART00000086772 |
slc19a3b
|
solute carrier family 19 (thiamine transporter), member 3b |
chr21_-_22648007 | 0.00 |
ENSDART00000121788
|
gig2l
|
grass carp reovirus (GCRV)-induced gene 2l |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.5 | GO:0070986 | left/right axis specification(GO:0070986) |
0.5 | 1.5 | GO:0021512 | spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111) |
0.1 | 2.3 | GO:0035803 | binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344) |
0.1 | 0.5 | GO:0018343 | protein farnesylation(GO:0018343) |
0.1 | 0.9 | GO:0006465 | signal peptide processing(GO:0006465) |
0.1 | 0.5 | GO:0071422 | thiosulfate transport(GO:0015709) oxaloacetate transport(GO:0015729) malate transport(GO:0015743) succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422) malate transmembrane transport(GO:0071423) |
0.1 | 0.8 | GO:0021521 | ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573) |
0.1 | 0.8 | GO:0045740 | positive regulation of DNA replication(GO:0045740) |
0.1 | 0.8 | GO:1901534 | positive regulation of hematopoietic progenitor cell differentiation(GO:1901534) |
0.0 | 0.9 | GO:0035459 | cargo loading into vesicle(GO:0035459) |
0.0 | 1.0 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation(GO:0033138) |
0.0 | 0.6 | GO:0098962 | regulation of postsynaptic neurotransmitter receptor activity(GO:0098962) |
0.0 | 0.1 | GO:0019532 | oxalate transport(GO:0019532) |
0.0 | 2.0 | GO:0034968 | histone lysine methylation(GO:0034968) |
0.0 | 0.1 | GO:0021961 | posterior commissure morphogenesis(GO:0021961) |
0.0 | 1.1 | GO:0032456 | endocytic recycling(GO:0032456) |
0.0 | 0.8 | GO:0030488 | tRNA methylation(GO:0030488) |
0.0 | 2.1 | GO:0015718 | monocarboxylic acid transport(GO:0015718) |
0.0 | 1.0 | GO:0035335 | peptidyl-tyrosine dephosphorylation(GO:0035335) |
0.0 | 0.7 | GO:0072015 | glomerular visceral epithelial cell development(GO:0072015) glomerular epithelial cell development(GO:0072310) |
0.0 | 0.7 | GO:0043966 | histone H3 acetylation(GO:0043966) |
0.0 | 0.1 | GO:0006535 | cysteine biosynthetic process from serine(GO:0006535) hydrogen sulfide biosynthetic process(GO:0070814) |
0.0 | 0.7 | GO:0018231 | peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231) |
0.0 | 0.4 | GO:0060021 | palate development(GO:0060021) |
0.0 | 0.2 | GO:0031573 | intra-S DNA damage checkpoint(GO:0031573) |
0.0 | 0.4 | GO:0006509 | membrane protein ectodomain proteolysis(GO:0006509) |
0.0 | 0.2 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.0 | 1.0 | GO:0030837 | negative regulation of actin filament polymerization(GO:0030837) negative regulation of protein polymerization(GO:0032272) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.5 | GO:0097189 | apoptotic body(GO:0097189) |
0.2 | 0.9 | GO:0098553 | integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) |
0.2 | 0.9 | GO:0031428 | box C/D snoRNP complex(GO:0031428) |
0.1 | 0.5 | GO:0005965 | protein farnesyltransferase complex(GO:0005965) |
0.1 | 0.8 | GO:0035060 | brahma complex(GO:0035060) |
0.1 | 0.4 | GO:0005674 | transcription factor TFIIF complex(GO:0005674) |
0.0 | 0.7 | GO:0000124 | SAGA complex(GO:0000124) |
0.0 | 0.9 | GO:0030867 | rough endoplasmic reticulum membrane(GO:0030867) |
0.0 | 0.8 | GO:0045180 | basal cortex(GO:0045180) |
0.0 | 0.7 | GO:0016281 | eukaryotic translation initiation factor 4F complex(GO:0016281) |
0.0 | 0.9 | GO:0070971 | endoplasmic reticulum exit site(GO:0070971) |
0.0 | 0.4 | GO:0005903 | brush border(GO:0005903) |
0.0 | 0.6 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.0 | 0.1 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.1 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 0.6 | GO:0098978 | glutamatergic synapse(GO:0098978) |
0.0 | 0.7 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.0 | 3.7 | GO:0005813 | centrosome(GO:0005813) |
0.0 | 0.1 | GO:0031515 | tRNA (m1A) methyltransferase complex(GO:0031515) |
0.0 | 0.2 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 0.8 | GO:0016300 | tRNA (uracil) methyltransferase activity(GO:0016300) |
0.2 | 2.6 | GO:0015129 | lactate transmembrane transporter activity(GO:0015129) |
0.2 | 2.0 | GO:0035804 | structural constituent of egg coat(GO:0035804) |
0.1 | 2.3 | GO:0002039 | p53 binding(GO:0002039) |
0.1 | 0.5 | GO:0004660 | protein farnesyltransferase activity(GO:0004660) |
0.1 | 0.9 | GO:0042500 | aspartic endopeptidase activity, intramembrane cleaving(GO:0042500) |
0.1 | 0.5 | GO:0015131 | thiosulfate transmembrane transporter activity(GO:0015117) oxaloacetate transmembrane transporter activity(GO:0015131) malate transmembrane transporter activity(GO:0015140) |
0.1 | 0.7 | GO:0016864 | protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864) |
0.0 | 0.9 | GO:0030515 | snoRNA binding(GO:0030515) |
0.0 | 0.3 | GO:0070568 | guanylyltransferase activity(GO:0070568) |
0.0 | 0.7 | GO:0000340 | RNA 7-methylguanosine cap binding(GO:0000340) |
0.0 | 0.3 | GO:0032190 | acrosin binding(GO:0032190) |
0.0 | 0.3 | GO:0000254 | C-4 methylsterol oxidase activity(GO:0000254) |
0.0 | 2.2 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 0.7 | GO:0016251 | obsolete general RNA polymerase II transcription factor activity(GO:0016251) |
0.0 | 1.0 | GO:0005109 | frizzled binding(GO:0005109) |
0.0 | 0.1 | GO:0004122 | cystathionine beta-synthase activity(GO:0004122) |
0.0 | 0.1 | GO:0080019 | fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019) |
0.0 | 0.7 | GO:0019707 | protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707) |
0.0 | 2.8 | GO:0035091 | phosphatidylinositol binding(GO:0035091) |
0.0 | 0.1 | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity(GO:0016429) |
0.0 | 0.2 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) FMN binding(GO:0010181) NADH dehydrogenase (quinone) activity(GO:0050136) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.1 | 0.8 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 1.0 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 0.7 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 1.0 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 0.6 | PID CDC42 PATHWAY | CDC42 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.6 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.2 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 0.7 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.0 | 0.5 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.0 | 0.2 | REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION | Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation |
0.0 | 0.7 | REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING | Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening |