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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for nkx2.2a

Z-value: 0.24

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Transcription factors associated with nkx2.2a

Gene Symbol Gene ID Gene Info
nkx2.2a
ENSDARG00000053298 NK2 homeobox 2a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nkx2.2adr11_v1_chr17_-_42213822_422138220.223.8e-01Click!

Activity profile of nkx2.2a motif

Sorted Z-values of nkx2.2a motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr24_-_33308045 0.25 ENSDART00000149711
slc4a2b
solute carrier family 4 (anion exchanger), member 2b
chr7_+_22792895 0.25 ENSDART00000184407
rbm4.3
RNA binding motif protein 4.3
chr19_+_24039830 0.22 ENSDART00000100422
rit1
Ras-like without CAAX 1
chr2_+_51818039 0.20 ENSDART00000170353
acvr2bb
activin A receptor type 2Bb
chr11_+_42422371 0.20 ENSDART00000163780
dennd6aa
DENN/MADD domain containing 6Aa
chrM_+_12897 0.19 ENSDART00000093622
mt-nd5
NADH dehydrogenase 5, mitochondrial
chr22_-_8006342 0.18 ENSDART00000162028
sc:d217
sc:d217
chr2_-_38225388 0.18 ENSDART00000146485
ENSDART00000128043
acin1a
apoptotic chromatin condensation inducer 1a
chr13_+_47710434 0.18 ENSDART00000188724
TMEM87B
transmembrane protein 87B
chr5_-_54481692 0.17 ENSDART00000165719
fbxw5
F-box and WD repeat domain containing 5
chr20_-_9194257 0.17 ENSDART00000133012
ylpm1
YLP motif containing 1
chr16_-_54919260 0.17 ENSDART00000156533
kdf1a
keratinocyte differentiation factor 1a
chr10_+_44984946 0.16 ENSDART00000182520
h2afvb
H2A histone family, member Vb
chr1_-_23294753 0.16 ENSDART00000013263
ugdh
UDP-glucose 6-dehydrogenase
chr11_-_11518469 0.16 ENSDART00000104254
krt15
keratin 15
chr19_-_27827744 0.16 ENSDART00000181620
papd7
PAP associated domain containing 7
chr4_-_4570475 0.16 ENSDART00000184955
rassf3
Ras association (RalGDS/AF-6) domain family member 3
chr10_-_32851847 0.15 ENSDART00000134255
trim37
tripartite motif containing 37
chr7_+_22792132 0.15 ENSDART00000135207
ENSDART00000146801
rbm4.3
RNA binding motif protein 4.3
chr17_+_19481049 0.14 ENSDART00000024194
kif11
kinesin family member 11
chr10_-_10018120 0.14 ENSDART00000132375
strbp
spermatid perinuclear RNA binding protein
chr6_-_8465656 0.14 ENSDART00000178887
si:dkey-217d24.6
si:dkey-217d24.6
chr20_+_25712276 0.14 ENSDART00000121585
ENSDART00000185772
cep135
centrosomal protein 135
chr4_-_72609735 0.14 ENSDART00000174299
ENSDART00000159227
si:cabz01054394.6
si:cabz01054394.6
chr14_+_46342882 0.14 ENSDART00000193707
ENSDART00000060577
tmem33
transmembrane protein 33
chr1_-_40341306 0.14 ENSDART00000190649
maml3
mastermind-like transcriptional coactivator 3
chr15_+_15266025 0.14 ENSDART00000112974
ENSDART00000184450
c2cd3
C2 calcium-dependent domain containing 3
chr6_+_10338554 0.14 ENSDART00000186936
cobll1a
cordon-bleu WH2 repeat protein-like 1a
chr16_-_33105677 0.14 ENSDART00000145055
pnrc2
proline-rich nuclear receptor coactivator 2
chr19_+_7575341 0.14 ENSDART00000134271
s100u
S100 calcium binding protein U
chr22_+_23430688 0.14 ENSDART00000160457
dennd1b
DENN/MADD domain containing 1B
chr21_-_21790372 0.13 ENSDART00000151094
xrra1
X-ray radiation resistance associated 1
chr16_-_4610255 0.13 ENSDART00000081852
ENSDART00000123253
ENSDART00000127554
ENSDART00000029485
arnt
aryl hydrocarbon receptor nuclear translocator
chr13_-_38730267 0.13 ENSDART00000157524
lmbrd1
LMBR1 domain containing 1
chr24_+_17069420 0.13 ENSDART00000014787
pip4k2aa
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a
chr2_+_31437547 0.13 ENSDART00000141170
stam
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr9_+_28140089 0.13 ENSDART00000046880
plekhm3
pleckstrin homology domain containing, family M, member 3
chr7_+_41887429 0.13 ENSDART00000115090
gpt2
glutamic pyruvate transaminase (alanine aminotransferase) 2
chr14_-_48786708 0.13 ENSDART00000169730
si:ch211-199b20.3
si:ch211-199b20.3
chr11_+_34522554 0.13 ENSDART00000109833
zmat3
zinc finger, matrin-type 3
chr21_+_19547806 0.13 ENSDART00000159707
ENSDART00000184869
ENSDART00000181321
ENSDART00000058487
ENSDART00000058485
rai14
retinoic acid induced 14
chr11_+_42422638 0.13 ENSDART00000042599
ENSDART00000181175
dennd6aa
DENN/MADD domain containing 6Aa
chr16_-_39267185 0.13 ENSDART00000058550
ENSDART00000133642
gpd1l
glycerol-3-phosphate dehydrogenase 1 like
chr10_+_41945890 0.13 ENSDART00000063013
ENSDART00000128313
tmem120b
transmembrane protein 120B
chr11_+_25064519 0.12 ENSDART00000016181
ndrg3a
ndrg family member 3a
chr4_-_27129697 0.12 ENSDART00000131240
zbed4
zinc finger, BED-type containing 4
chr5_+_41143563 0.12 ENSDART00000011229
sub1b
SUB1 homolog, transcriptional regulator b
chr24_-_2423791 0.12 ENSDART00000190402
rreb1a
ras responsive element binding protein 1a
chr10_+_36441124 0.12 ENSDART00000185626
uspl1
ubiquitin specific peptidase like 1
chr8_-_1698155 0.12 ENSDART00000186159
CABZ01065417.1

chr16_-_31284922 0.12 ENSDART00000142638
mroh1
maestro heat-like repeat family member 1
chr10_-_7988396 0.12 ENSDART00000141445
ENSDART00000024282
ewsr1a
EWS RNA-binding protein 1a
chr2_-_32387441 0.12 ENSDART00000148202
ubtfl
upstream binding transcription factor, like
chr22_+_28818291 0.12 ENSDART00000136032
tp53bp2b
tumor protein p53 binding protein, 2b
chr3_+_31662126 0.12 ENSDART00000113441
mylk5
myosin, light chain kinase 5
chr23_-_270847 0.12 ENSDART00000191867
anks1aa
ankyrin repeat and sterile alpha motif domain containing 1Aa
chr2_+_2967255 0.11 ENSDART00000167649
ENSDART00000166449
pik3r3a
phosphoinositide-3-kinase, regulatory subunit 3a (gamma)
chr16_-_47427016 0.11 ENSDART00000074575
sept7b
septin 7b
chr22_-_34979139 0.11 ENSDART00000116455
ENSDART00000133537
arhgap19
Rho GTPase activating protein 19
chr18_+_26428829 0.11 ENSDART00000190779
ENSDART00000193226
ENSDART00000110746
blm
Bloom syndrome, RecQ helicase-like
chr8_-_11016766 0.11 ENSDART00000064066
bcas2
BCAS2, pre-mRNA processing factor
chr8_-_49764156 0.11 ENSDART00000177589
ENSDART00000189142
hnrnpk
heterogeneous nuclear ribonucleoprotein K
chr6_+_11438972 0.11 ENSDART00000029314
col5a2b
collagen, type V, alpha 2b
chr11_+_3308656 0.11 ENSDART00000082458
sarnp
SAP domain containing ribonucleoprotein
chr2_-_32262287 0.11 ENSDART00000056621
ENSDART00000039717
fam49ba
family with sequence similarity 49, member Ba
chr12_-_11349899 0.11 ENSDART00000079645
zgc:174164
zgc:174164
chr11_+_12811906 0.11 ENSDART00000123445
rtel1
regulator of telomere elongation helicase 1
chr1_-_681116 0.10 ENSDART00000165894
adamts1
ADAM metallopeptidase with thrombospondin type 1 motif, 1
chr17_+_30205258 0.10 ENSDART00000076596
ENSDART00000153795
spata17
spermatogenesis associated 17
chr6_+_21227621 0.10 ENSDART00000193583
prkca
protein kinase C, alpha
chr16_-_22585289 0.10 ENSDART00000134239
ENSDART00000193959
ENSDART00000077998
si:dkey-238m4.3
cgna
si:dkey-238m4.3
cingulin a
chr17_+_21887823 0.10 ENSDART00000131929
ENSDART00000165192
plekha1a
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a
chr5_+_43782267 0.10 ENSDART00000130355
nos2a
nitric oxide synthase 2a, inducible
chr1_-_9858508 0.10 ENSDART00000147904
mad1l1
mitotic arrest deficient 1 like 1
chr19_+_29798064 0.10 ENSDART00000167803
ENSDART00000051804
marcksl1b
MARCKS-like 1b
chr13_-_33317323 0.10 ENSDART00000110295
ENSDART00000144848
ENSDART00000136701
tmem234
transmembrane protein 234
chr23_+_19813677 0.10 ENSDART00000139192
ENSDART00000142308
emd
emerin (Emery-Dreifuss muscular dystrophy)
chr1_-_625875 0.10 ENSDART00000167331
appa
amyloid beta (A4) precursor protein a
chr7_-_64770456 0.10 ENSDART00000192618
zdhhc21
zinc finger, DHHC-type containing 21
chr13_-_865193 0.10 ENSDART00000187053
AL929536.7

chr20_-_53963515 0.10 ENSDART00000110252
ppp2r5cb
protein phosphatase 2, regulatory subunit B', gamma b
chr2_+_50477779 0.10 ENSDART00000122716
CABZ01067973.1

chr3_+_39579393 0.10 ENSDART00000055170
cln3
ceroid-lipofuscinosis, neuronal 3
chr12_+_33361948 0.10 ENSDART00000124982
fasn
fatty acid synthase
chr11_-_30636163 0.09 ENSDART00000140516
zgc:153665
zgc:153665
chr18_-_17145111 0.09 ENSDART00000090446
zc3h18
zinc finger CCCH-type containing 18
chr3_+_16668609 0.09 ENSDART00000185646
zgc:55558
zgc:55558
chr25_-_5119162 0.09 ENSDART00000153961
shisal1b
shisa like 1b
chr11_+_18873113 0.09 ENSDART00000103969
ENSDART00000103968
magi1b
membrane associated guanylate kinase, WW and PDZ domain containing 1b
chr23_+_6795709 0.09 ENSDART00000149136
si:ch211-117c9.5
si:ch211-117c9.5
chr3_+_31093455 0.09 ENSDART00000153074
si:dkey-66i24.9
si:dkey-66i24.9
chr19_+_34230108 0.09 ENSDART00000141950
galnt12
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
chr4_-_12914163 0.09 ENSDART00000140002
ENSDART00000145917
ENSDART00000141355
ENSDART00000067135
msrb3
methionine sulfoxide reductase B3
chr6_+_1724889 0.09 ENSDART00000157415
acvr2ab
activin A receptor type 2Ab
chr23_-_36934944 0.09 ENSDART00000109976
ENSDART00000162179
acap3a
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a
chr7_-_40122139 0.09 ENSDART00000173982
si:ch73-174h16.5
si:ch73-174h16.5
chr22_+_17248145 0.09 ENSDART00000136908
axdnd1
axonemal dynein light chain domain containing 1
chr24_+_5935377 0.09 ENSDART00000191989
ENSDART00000185932
ENSDART00000131768
abi1a
abl-interactor 1a
chr3_-_26805455 0.08 ENSDART00000180648
pigq
phosphatidylinositol glycan anchor biosynthesis, class Q
chr22_+_38049130 0.08 ENSDART00000097533
wwtr1
WW domain containing transcription regulator 1
chr14_-_49133426 0.08 ENSDART00000042421
ppp2ca
protein phosphatase 2, catalytic subunit, alpha isozyme
chr17_+_50074372 0.08 ENSDART00000113644
vps39
vacuolar protein sorting 39 homolog (S. cerevisiae)
chr23_-_14990865 0.08 ENSDART00000147799
ndrg3b
ndrg family member 3b
chr3_-_31875138 0.08 ENSDART00000155298
limd2
LIM domain containing 2
chr16_-_8132742 0.08 ENSDART00000104323
snrka
SNF related kinase a
chr9_+_35016201 0.08 ENSDART00000182404
gabpa
GA binding protein transcription factor, alpha subunit
chr13_+_33368140 0.08 ENSDART00000033848
brf1a
BRF1, RNA polymerase III transcription initiation factor a
chr19_+_14352332 0.08 ENSDART00000164386
arid1ab
AT rich interactive domain 1Ab (SWI-like)
chr13_-_22699024 0.08 ENSDART00000016946
glud1a
glutamate dehydrogenase 1a
chr3_-_26806032 0.08 ENSDART00000143710
pigq
phosphatidylinositol glycan anchor biosynthesis, class Q
chr1_-_54622227 0.08 ENSDART00000049010
tekt4
tektin 4
chr15_-_28569786 0.08 ENSDART00000127845
ssh2a
slingshot protein phosphatase 2a
chr12_+_33320884 0.08 ENSDART00000188988
csnk1db
casein kinase 1, delta b
chr1_+_37196106 0.08 ENSDART00000008756
ENSDART00000157503
ENSDART00000162971
ENSDART00000191004
ENSDART00000078206
ENSDART00000045111
dclk2a
doublecortin-like kinase 2a
chr21_+_30662263 0.08 ENSDART00000154758
ENSDART00000138664
clcn5a
chloride channel, voltage-sensitive 5a
chr14_-_858985 0.08 ENSDART00000148687
ENSDART00000149375
slc34a1a
solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a
chr14_-_25956804 0.08 ENSDART00000135627
ENSDART00000146022
ENSDART00000039660
sparc
secreted protein, acidic, cysteine-rich (osteonectin)
chr5_-_38777852 0.08 ENSDART00000131603
si:dkey-58f10.4
si:dkey-58f10.4
chr7_+_20109968 0.08 ENSDART00000146335
zgc:114045
zgc:114045
chr16_+_32729223 0.08 ENSDART00000125663
si:dkey-165n16.1
si:dkey-165n16.1
chr8_+_3431671 0.08 ENSDART00000017850
ctu1
cytosolic thiouridylase subunit 1 homolog (S. pombe)
chr5_-_23473312 0.08 ENSDART00000140310
si:dkeyp-20g2.3
si:dkeyp-20g2.3
chr7_+_42328578 0.08 ENSDART00000149082
phkb
phosphorylase kinase, beta
chr7_-_7766920 0.08 ENSDART00000173376
intu
inturned planar cell polarity protein
chr24_+_15655069 0.08 ENSDART00000042943
ENSDART00000181296
fbxo15
F-box protein 15
chr17_+_27723490 0.08 ENSDART00000123588
ENSDART00000170462
ENSDART00000169708
qkia
QKI, KH domain containing, RNA binding a
chr5_-_10082244 0.07 ENSDART00000036421
chek2
checkpoint kinase 2
chr23_+_6795531 0.07 ENSDART00000092131
si:ch211-117c9.5
si:ch211-117c9.5
chr16_+_17763848 0.07 ENSDART00000149408
ENSDART00000148878
them4
thioesterase superfamily member 4
chr9_+_34950942 0.07 ENSDART00000077800
tfdp1a
transcription factor Dp-1, a
chr24_-_7587401 0.07 ENSDART00000093163
galnt11
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
chr9_-_33781845 0.07 ENSDART00000008737
efhc2
EF-hand domain (C-terminal) containing 2
chr24_+_41989108 0.07 ENSDART00000169725
zbtb14
zinc finger and BTB domain containing 14
chr15_-_20731297 0.07 ENSDART00000114464
tpst1
tyrosylprotein sulfotransferase 1
chr5_-_19444930 0.07 ENSDART00000136259
ENSDART00000188499
kctd10
potassium channel tetramerization domain containing 10
chr12_-_5188413 0.07 ENSDART00000161988
fra10ac1
FRA10A associated CGG repeat 1
chr24_-_26518972 0.07 ENSDART00000097792
tnikb
TRAF2 and NCK interacting kinase b
chr23_-_17451264 0.07 ENSDART00000190748
tpd52l2b
tumor protein D52-like 2b
chr24_+_10039165 0.07 ENSDART00000144186
pou6f2
POU class 6 homeobox 2
chr9_-_15208129 0.07 ENSDART00000137043
ENSDART00000131512
pard3bb
par-3 family cell polarity regulator beta b
chr15_+_31526225 0.07 ENSDART00000154456
wdr95
WD40 repeat domain 95
chr6_+_9793791 0.07 ENSDART00000149896
als2b
amyotrophic lateral sclerosis 2b (juvenile)
chr22_-_21676364 0.07 ENSDART00000183668
tle2b
transducin like enhancer of split 2b
chr12_-_25150239 0.07 ENSDART00000038415
ENSDART00000135368
rhoq
ras homolog family member Q
chr2_-_10877228 0.07 ENSDART00000138718
ENSDART00000034246
cdc7
cell division cycle 7 homolog (S. cerevisiae)
chr7_+_13527971 0.07 ENSDART00000020542
plekho2
pleckstrin homology domain containing, family O member 2
chr14_+_23717165 0.07 ENSDART00000006373
ndfip1
Nedd4 family interacting protein 1
chr12_-_3705862 0.07 ENSDART00000193864
ENSDART00000185857
CABZ01069040.1

chr7_+_71586485 0.07 ENSDART00000165582
smchd1
structural maintenance of chromosomes flexible hinge domain containing 1
chr5_+_5406503 0.07 ENSDART00000124022
mapkap1
mitogen-activated protein kinase associated protein 1
chr11_-_11961706 0.07 ENSDART00000115249
abcc10
ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr2_+_33051730 0.06 ENSDART00000177902
ENSDART00000187903
rnf220a
ring finger protein 220a
chr14_-_38889840 0.06 ENSDART00000035779
zgc:101583
zgc:101583
chr23_+_20431388 0.06 ENSDART00000132920
ENSDART00000102963
ENSDART00000109899
ENSDART00000140219
slc35c2
solute carrier family 35 (GDP-fucose transporter), member C2
chr22_-_16270462 0.06 ENSDART00000105681
cdc14ab
cell division cycle 14Ab
chr20_-_54245256 0.06 ENSDART00000170482
prpf39
PRP39 pre-mRNA processing factor 39 homolog (yeast)
chr25_+_8407892 0.06 ENSDART00000153536
muc5.2
mucin 5.2
chr3_-_15487111 0.06 ENSDART00000011320
nfatc2ip
nuclear factor of activated T cells 2 interacting protein
chr13_-_31164749 0.06 ENSDART00000049180
mapk8a
mitogen-activated protein kinase 8a
chr20_+_812012 0.06 ENSDART00000179299
ENSDART00000137135
mei4
meiosis-specific, MEI4 homolog (S. cerevisiae)
chr10_-_5135788 0.06 ENSDART00000108587
ENSDART00000138537
sec31a
SEC31 homolog A, COPII coat complex component
chr14_+_14043793 0.06 ENSDART00000164376
rraga
Ras-related GTP binding A
chr3_+_46315016 0.06 ENSDART00000157199
mkl2b
MKL/myocardin-like 2b
chr23_+_36730713 0.06 ENSDART00000113179
tspan31
tetraspanin 31
chr22_-_15562933 0.06 ENSDART00000141528
ankmy1
ankyrin repeat and MYND domain containing 1
chr19_-_10656667 0.06 ENSDART00000081379
ENSDART00000151456
ENSDART00000143271
ENSDART00000182126
olah
oleoyl-ACP hydrolase
chr2_-_7185460 0.06 ENSDART00000092078
rc3h1b
ring finger and CCCH-type domains 1b
chr20_-_33507458 0.06 ENSDART00000140287
paplnb
papilin b, proteoglycan-like sulfated glycoprotein
chr15_-_20731638 0.06 ENSDART00000170616
tpst1
tyrosylprotein sulfotransferase 1
chr19_-_32940040 0.06 ENSDART00000179947
azin1b
antizyme inhibitor 1b
chr7_-_69636502 0.06 ENSDART00000126739
tspan5a
tetraspanin 5a
chr13_+_33368503 0.06 ENSDART00000139650
brf1a
BRF1, RNA polymerase III transcription initiation factor a
chr4_+_37992753 0.06 ENSDART00000193890
CR759843.2

chr24_-_37272116 0.06 ENSDART00000022999
ube2ib
ubiquitin-conjugating enzyme E2Ib
chr25_-_10615504 0.06 ENSDART00000156797
ppp6r3
protein phosphatase 6, regulatory subunit 3
chr17_+_27545183 0.06 ENSDART00000129392
pacrg
PARK2 co-regulated
chr1_-_58601636 0.06 ENSDART00000141143
si:ch73-236c18.8
si:ch73-236c18.8
chr3_-_34136778 0.06 ENSDART00000131951
clpp
caseinolytic mitochondrial matrix peptidase proteolytic subunit
chr9_+_43799829 0.06 ENSDART00000186240
ube2e3
ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
chr21_-_27221535 0.05 ENSDART00000138266
mark2a
MAP/microtubule affinity-regulating kinase 2a
chr5_+_54497730 0.05 ENSDART00000157722
tmem203
transmembrane protein 203
chr25_-_30047477 0.05 ENSDART00000164859
CR759810.1

chr19_+_24896409 0.05 ENSDART00000049840
eya3
EYA transcriptional coactivator and phosphatase 3
chr1_-_1894722 0.05 ENSDART00000165669
si:ch211-132g1.3
si:ch211-132g1.3
chr1_-_51261420 0.05 ENSDART00000168685
kif16ba
kinesin family member 16Ba
chr13_-_18863680 0.05 ENSDART00000109277
lzts2a
leucine zipper, putative tumor suppressor 2a
chr25_+_3358701 0.05 ENSDART00000104877
chchd3b
coiled-coil-helix-coiled-coil-helix domain containing 3b
chr15_-_23529945 0.05 ENSDART00000152543
hmbsb
hydroxymethylbilane synthase, b
chr12_-_8817999 0.05 ENSDART00000113148
jmjd1cb
jumonji domain containing 1Cb
chr12_+_34770531 0.05 ENSDART00000153320
slc38a10
solute carrier family 38, member 10
chr12_-_4424424 0.05 ENSDART00000152314
si:ch211-173d10.1
si:ch211-173d10.1
chr15_+_6786757 0.05 ENSDART00000013278
sirt2
sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
chr6_-_41085692 0.05 ENSDART00000181463
srsf3a
serine/arginine-rich splicing factor 3a
chr19_+_26923274 0.05 ENSDART00000148439
ENSDART00000148877
nelfe
negative elongation factor complex member E
chr6_-_36795111 0.05 ENSDART00000160669
ENSDART00000104256
ENSDART00000187751
ENSDART00000161928
ENSDART00000183264
opa1
optic atrophy 1 (autosomal dominant)
chr14_-_25985698 0.05 ENSDART00000172909
ENSDART00000123053
atox1
antioxidant 1 copper chaperone
chr12_-_24812403 0.05 ENSDART00000185517
foxn2b
forkhead box N2b
chr11_+_37638873 0.05 ENSDART00000186384
ENSDART00000184291
ENSDART00000131782
ENSDART00000140502
sh2d5
SH2 domain containing 5
chr16_-_25400257 0.05 ENSDART00000040756
zgc:136493
zgc:136493
chr16_-_41465542 0.05 ENSDART00000169116
ENSDART00000187446
cpne4a
copine IVa

Network of associatons between targets according to the STRING database.

First level regulatory network of nkx2.2a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0015990 energy coupled proton transmembrane transport, against electrochemical gradient(GO:0015988) electron transport coupled proton transport(GO:0015990)
0.0 0.1 GO:1901187 regulation of ephrin receptor signaling pathway(GO:1901187)
0.0 0.2 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.0 0.1 GO:0046168 NADH oxidation(GO:0006116) glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.1 GO:0061181 regulation of chondrocyte development(GO:0061181)
0.0 0.1 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.1 GO:0044806 G-quadruplex DNA unwinding(GO:0044806)
0.0 0.1 GO:2000378 negative regulation of reactive oxygen species metabolic process(GO:2000378)
0.0 0.1 GO:0072156 proximal/distal pattern formation involved in nephron development(GO:0072047) distal tubule morphogenesis(GO:0072156) proximal/distal pattern formation involved in pronephric nephron development(GO:0072196)
0.0 0.1 GO:1904867 nuclear body organization(GO:0030575) Cajal body organization(GO:0030576) protein localization to nuclear body(GO:1903405) protein localization to Cajal body(GO:1904867) protein localization to nucleoplasm(GO:1990173)
0.0 0.1 GO:0010457 centriole-centriole cohesion(GO:0010457)
0.0 0.2 GO:0003188 heart valve formation(GO:0003188) atrioventricular valve formation(GO:0003190)
0.0 0.0 GO:1903251 multi-ciliated epithelial cell differentiation(GO:1903251)
0.0 0.1 GO:0030091 protein repair(GO:0030091)
0.0 0.2 GO:0046600 negative regulation of centriole replication(GO:0046600)
0.0 0.1 GO:2000425 regulation of apoptotic cell clearance(GO:2000425)
0.0 0.1 GO:0030213 hyaluronan biosynthetic process(GO:0030213)
0.0 0.1 GO:1901339 regulation of store-operated calcium channel activity(GO:1901339)
0.0 0.1 GO:0051660 establishment of centrosome localization(GO:0051660)
0.0 0.1 GO:0030828 regulation of cGMP metabolic process(GO:0030823) positive regulation of cGMP metabolic process(GO:0030825) regulation of cGMP biosynthetic process(GO:0030826) positive regulation of cGMP biosynthetic process(GO:0030828) regulation of guanylate cyclase activity(GO:0031282) positive regulation of guanylate cyclase activity(GO:0031284)
0.0 0.1 GO:0006477 protein sulfation(GO:0006477) peptidyl-tyrosine sulfation(GO:0006478)
0.0 0.1 GO:0048387 negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
0.0 0.1 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.1 GO:0008594 photoreceptor cell morphogenesis(GO:0008594) negative regulation of epithelial to mesenchymal transition(GO:0010719)
0.0 0.1 GO:0036306 embryonic heart tube elongation(GO:0036306)
0.0 0.3 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.0 0.1 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.1 GO:0015809 arginine transport(GO:0015809)
0.0 0.1 GO:0044341 sodium-dependent phosphate transport(GO:0044341)
0.0 0.1 GO:0032447 tRNA wobble position uridine thiolation(GO:0002143) protein urmylation(GO:0032447)
0.0 0.1 GO:0045444 fat cell differentiation(GO:0045444)
0.0 0.1 GO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.1 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.1 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.0 0.0 GO:0033335 anal fin development(GO:0033335)
0.0 0.1 GO:0090134 establishment or maintenance of cytoskeleton polarity(GO:0030952) mesendoderm migration(GO:0090133) cell migration involved in mesendoderm migration(GO:0090134)
0.0 0.1 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.0 GO:0098838 folic acid transport(GO:0015884) drug transport(GO:0015893) methotrexate transport(GO:0051958) reduced folate transmembrane transport(GO:0098838)
0.0 0.1 GO:0051898 negative regulation of protein kinase B signaling(GO:0051898)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.1 GO:1902047 polyamine transport(GO:0015846) polyamine transmembrane transport(GO:1902047) regulation of polyamine transmembrane transport(GO:1902267) positive regulation of polyamine transmembrane transport(GO:1902269)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.0 0.1 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.2 GO:0016234 inclusion body(GO:0016234)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.3 GO:0048179 activin receptor complex(GO:0048179)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.1 GO:0043220 compact myelin(GO:0043218) Schmidt-Lanterman incisure(GO:0043220)
0.0 0.1 GO:1990131 EGO complex(GO:0034448) Gtr1-Gtr2 GTPase complex(GO:1990131)
0.0 0.1 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.0 GO:0031466 Cul5-RING ubiquitin ligase complex(GO:0031466)
0.0 0.1 GO:1902636 kinociliary basal body(GO:1902636)
0.0 0.1 GO:0035060 brahma complex(GO:0035060)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0032183 SUMO binding(GO:0032183)
0.0 0.2 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.1 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.2 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.1 GO:0000995 transcription factor activity, core RNA polymerase III binding(GO:0000995)
0.0 0.3 GO:0017002 activin-activated receptor activity(GO:0017002)
0.0 0.1 GO:0008476 protein-tyrosine sulfotransferase activity(GO:0008476)
0.0 0.0 GO:1901612 cardiolipin binding(GO:1901612)
0.0 0.1 GO:0031419 cobalamin binding(GO:0031419)
0.0 0.0 GO:0016618 hydroxypyruvate reductase activity(GO:0016618) glyoxylate reductase (NADP) activity(GO:0030267)
0.0 0.1 GO:0004517 nitric-oxide synthase activity(GO:0004517)
0.0 0.1 GO:0061656 SUMO conjugating enzyme activity(GO:0061656)
0.0 0.1 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.1 GO:0050699 WW domain binding(GO:0050699)
0.0 0.1 GO:0005436 sodium:phosphate symporter activity(GO:0005436)
0.0 0.1 GO:0042903 tubulin deacetylase activity(GO:0042903)
0.0 0.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.2 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.0 GO:0015350 reduced folate carrier activity(GO:0008518) methotrexate transporter activity(GO:0015350)
0.0 0.1 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.1 GO:0042978 ornithine decarboxylase activator activity(GO:0042978)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME SIGNALLING TO P38 VIA RIT AND RIN Genes involved in Signalling to p38 via RIT and RIN
0.0 0.1 REACTOME NOTCH HLH TRANSCRIPTION PATHWAY Genes involved in Notch-HLH transcription pathway
0.0 0.1 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.1 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.0 0.1 REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE Genes involved in Regulation of Insulin Secretion by Acetylcholine