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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for phox2a

Z-value: 0.15

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Transcription factors associated with phox2a

Gene Symbol Gene ID Gene Info
phox2a
ENSDARG00000007406 paired like homeobox 2A

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
phox2adr11_v1_chr15_+_47440477_474404770.823.7e-05Click!

Activity profile of phox2a motif

Sorted Z-values of phox2a motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr11_-_2838699 0.46 ENSDART00000066189
lhfpl5a
LHFPL tetraspan subfamily member 5a
chr12_-_35830625 0.31 ENSDART00000180028
CU459056.1

chr17_+_15433518 0.31 ENSDART00000026180
fabp7a
fatty acid binding protein 7, brain, a
chr17_+_15433671 0.28 ENSDART00000149568
fabp7a
fatty acid binding protein 7, brain, a
chr1_-_44704261 0.23 ENSDART00000133210
si:dkey-28b4.8
si:dkey-28b4.8
chr8_+_16025554 0.18 ENSDART00000110171
elavl4
ELAV like neuron-specific RNA binding protein 4
chr4_-_9891874 0.17 ENSDART00000067193
adm2a
adrenomedullin 2a
chr6_+_13117598 0.14 ENSDART00000104744
casp8l1
caspase 8, apoptosis-related cysteine peptidase, like 1
chr20_-_9095105 0.13 ENSDART00000140792
oma1
OMA1 zinc metallopeptidase
chr20_+_41756996 0.11 ENSDART00000186393
fam184a
family with sequence similarity 184, member A
chr1_-_19502322 0.11 ENSDART00000181888
ENSDART00000044030
kitb
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b
chr18_+_2228737 0.09 ENSDART00000165301
rab27a
RAB27A, member RAS oncogene family
chr4_+_6032640 0.08 ENSDART00000157487
tfec
transcription factor EC
chr9_+_21165484 0.07 ENSDART00000177286
si:rp71-68n21.9
si:rp71-68n21.9
chr21_-_13123176 0.06 ENSDART00000144866
ENSDART00000024616
fam219aa
family with sequence similarity 219, member Aa
chr15_-_22074315 0.06 ENSDART00000149830
drd2a
dopamine receptor D2a
chr16_+_28994709 0.05 ENSDART00000088023
gon4l
gon-4-like (C. elegans)
chr12_-_6880694 0.05 ENSDART00000171846
pcdh15b
protocadherin-related 15b
chr1_-_31171242 0.05 ENSDART00000190294
kcnq5b
potassium voltage-gated channel, KQT-like subfamily, member 5b
chr4_-_1801519 0.04 ENSDART00000188604
ENSDART00000135749
nudt4b
nudix (nucleoside diphosphate linked moiety X)-type motif 4b
chr21_+_43328685 0.04 ENSDART00000109620
ENSDART00000139668
sept8a
septin 8a
chr2_-_9818640 0.04 ENSDART00000139499
ENSDART00000165548
ENSDART00000012442
ENSDART00000046587
ap2m1b
adaptor-related protein complex 2, mu 1 subunit, b
chr10_+_42423318 0.04 ENSDART00000134282
npy8ar
neuropeptide Y receptor Y8a
chr22_-_10121880 0.04 ENSDART00000002348
rdh5
retinol dehydrogenase 5 (11-cis/9-cis)
chr11_-_42554290 0.04 ENSDART00000130573
atp6ap1la
ATPase H+ transporting accessory protein 1 like a
chr9_-_9415000 0.04 ENSDART00000146210
si:ch211-214p13.9
si:ch211-214p13.9
chr1_-_45616470 0.04 ENSDART00000150165
atf7ip
activating transcription factor 7 interacting protein
chr16_-_25568512 0.03 ENSDART00000149411
atxn1b
ataxin 1b
chr13_+_22476742 0.03 ENSDART00000078759
ENSDART00000130101
ENSDART00000137220
ENSDART00000133065
ENSDART00000147348
ldb3a
LIM domain binding 3a
chr2_+_2223837 0.03 ENSDART00000101038
ENSDART00000129354
tmie
transmembrane inner ear
chr10_-_22918214 0.03 ENSDART00000163908
rnasekb
ribonuclease, RNase K b
chr15_+_5360407 0.03 ENSDART00000110420
or112-1
odorant receptor, family A, subfamily 112, member 1
chr3_-_56541723 0.03 ENSDART00000156398
ENSDART00000050576
ENSDART00000184874
si:ch211-189a21.1
cyth1a
si:ch211-189a21.1
cytohesin 1a
chr10_-_11261565 0.03 ENSDART00000146727
ptbp3
polypyrimidine tract binding protein 3
chr6_+_24420523 0.03 ENSDART00000185461
tgfbr3
transforming growth factor, beta receptor III
chr21_+_32820175 0.02 ENSDART00000076903
adra2db
adrenergic, alpha-2D-, receptor b
chr16_-_11798994 0.02 ENSDART00000135408
cnfn
cornifelin
chr21_-_42100471 0.02 ENSDART00000166148
gabra1
gamma-aminobutyric acid (GABA) A receptor, alpha 1
chr9_-_32177117 0.02 ENSDART00000078568
sf3b1
splicing factor 3b, subunit 1
chr22_-_8725768 0.01 ENSDART00000189873
ENSDART00000181819
si:ch73-27e22.1
si:ch73-27e22.8
si:ch73-27e22.1
si:ch73-27e22.8
chr14_+_40874608 0.01 ENSDART00000168448
si:ch211-106m9.1
si:ch211-106m9.1
chr15_-_14552101 0.01 ENSDART00000171169
numbl
numb homolog (Drosophila)-like
chr23_+_43255328 0.01 ENSDART00000102712
tgm2a
transglutaminase 2, C polypeptide A
chr7_+_25221757 0.01 ENSDART00000173551
exoc6b
exocyst complex component 6B
chr24_+_28953089 0.01 ENSDART00000153761
rnpc3
RNA-binding region (RNP1, RRM) containing 3
chr17_-_10122204 0.01 ENSDART00000160751
BX088587.1

chr19_+_2631565 0.01 ENSDART00000171487
fam126a
family with sequence similarity 126, member A
chr14_+_17376940 0.01 ENSDART00000054590
ENSDART00000010148
spon2b
spondin 2b, extracellular matrix protein
chr21_+_28478663 0.01 ENSDART00000077887
ENSDART00000134150
slc22a6l
solute carrier family 22 (organic anion transporter), member 6, like
chr13_+_255067 0.00 ENSDART00000102505
foxg1d
forkhead box G1d

Network of associatons between targets according to the STRING database.

First level regulatory network of phox2a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0038093 Fc receptor signaling pathway(GO:0038093)
0.0 0.1 GO:1990845 adaptive thermogenesis(GO:1990845)
0.0 0.5 GO:0060122 inner ear receptor stereocilium organization(GO:0060122)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)