Project

PRJNA438478: RNAseq of wild type zebrafish germline

Navigation
Downloads

Results for pou6f1

Z-value: 0.45

Motif logo

logo of

Transcription factors associated with pou6f1

Gene Symbol Gene ID Gene Info
pou6f1
ENSDARG00000011570 POU class 6 homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
pou6f1dr11_v1_chr23_-_33702900_337029000.881.2e-06Click!

Activity profile of pou6f1 motif

Sorted Z-values of pou6f1 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr21_+_25777425 1.00 ENSDART00000021620
cldnd
claudin d
chr1_-_53468160 0.96 ENSDART00000143349
zgc:66455
zgc:66455
chr7_-_19364813 0.89 ENSDART00000173977
ntn4
netrin 4
chr16_-_29387215 0.74 ENSDART00000148787
s100a1
S100 calcium binding protein A1
chr21_-_13690712 0.65 ENSDART00000065817
pou5f3
POU domain, class 5, transcription factor 3
chr7_+_38717624 0.51 ENSDART00000132522
syt13
synaptotagmin XIII
chr9_+_34151367 0.47 ENSDART00000143991
gpr161
G protein-coupled receptor 161
chr15_-_931815 0.45 ENSDART00000106627
ENSDART00000102239
ENSDART00000184754
ENSDART00000186733
zgc:162936
zgc:162936
chr15_-_33172246 0.44 ENSDART00000158666
nbeab
neurobeachin b
chr18_-_43866001 0.40 ENSDART00000150218
treh
trehalase (brush-border membrane glycoprotein)
chr3_+_1219344 0.38 ENSDART00000161945
rrp7a
ribosomal RNA processing 7 homolog A
chr18_-_43866526 0.37 ENSDART00000111309
treh
trehalase (brush-border membrane glycoprotein)
chr10_-_45058886 0.36 ENSDART00000159347
mrps24
mitochondrial ribosomal protein S24
chr13_+_43400443 0.35 ENSDART00000084321
dact2
dishevelled-binding antagonist of beta-catenin 2
chr1_-_51710225 0.35 ENSDART00000057601
ENSDART00000152745
snrpb2
small nuclear ribonucleoprotein polypeptide B2
chr4_-_72609118 0.34 ENSDART00000174077
si:cabz01054396.2
si:cabz01054396.2
chr2_-_21625493 0.30 ENSDART00000137169
zgc:55781
zgc:55781
chr2_-_20981907 0.29 ENSDART00000113384
lyrm4
LYR motif containing 4
chr18_+_34181655 0.29 ENSDART00000130831
ENSDART00000109535
gmps
guanine monophosphate synthase
chr18_-_20608025 0.27 ENSDART00000090156
ENSDART00000151980
bcl2l13
BCL2 like 13
chr2_-_37312927 0.27 ENSDART00000141214
skila
SKI-like proto-oncogene a
chr5_-_39736383 0.27 ENSDART00000127123
rasgef1ba
RasGEF domain family, member 1Ba
chr24_-_25096199 0.26 ENSDART00000185076
phldb2b
pleckstrin homology-like domain, family B, member 2b
chr2_+_29249204 0.26 ENSDART00000168957
cdh18a
cadherin 18, type 2a
chr14_-_28565675 0.26 ENSDART00000193961
insb
preproinsulin b
chr14_-_28566238 0.25 ENSDART00000172547
insb
preproinsulin b
chr18_+_3243292 0.25 ENSDART00000166580
pak1
p21 protein (Cdc42/Rac)-activated kinase 1
chr9_-_16218097 0.25 ENSDART00000190503
myo1b
myosin IB
chr7_+_13988075 0.24 ENSDART00000186812
furina
furin (paired basic amino acid cleaving enzyme) a
chr15_-_5720583 0.24 ENSDART00000158034
ENSDART00000190332
ENSDART00000109599
urb1
URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
chr16_-_25368048 0.24 ENSDART00000132445
rbfa
ribosome binding factor A
chr4_-_2380173 0.24 ENSDART00000177727
nap1l1
nucleosome assembly protein 1-like 1
chr7_+_48297842 0.24 ENSDART00000052123
slc25a44b
solute carrier family 25, member 44 b
chr24_-_16979728 0.24 ENSDART00000005331
klhl15
kelch-like family member 15
chr2_+_38892631 0.23 ENSDART00000134040
si:ch211-119o8.4
si:ch211-119o8.4
chr22_-_11829436 0.22 ENSDART00000126784
ptpn4b
protein tyrosine phosphatase, non-receptor type 4b
chr12_+_32729470 0.22 ENSDART00000175712
rbfox3a
RNA binding fox-1 homolog 3a
chr2_+_29249561 0.20 ENSDART00000099157
cdh18a
cadherin 18, type 2a
chr1_+_50968908 0.19 ENSDART00000150353
ENSDART00000012842
mdh1aa
malate dehydrogenase 1Aa, NAD (soluble)
chr1_+_19649545 0.19 ENSDART00000054575
tmem192
transmembrane protein 192
chr6_-_9676108 0.18 ENSDART00000169915
nop58
NOP58 ribonucleoprotein homolog (yeast)
chr17_-_24587686 0.17 ENSDART00000143084
aftphb
aftiphilin b
chr21_+_40292801 0.17 ENSDART00000174220
si:ch211-218m3.16
si:ch211-218m3.16
chr25_-_8625601 0.17 ENSDART00000155280
GDPGP1
zgc:153343
chr25_+_28555584 0.17 ENSDART00000157046
SLC15A5
si:ch211-190o6.3
chr7_+_53498152 0.16 ENSDART00000184497
znf609b
zinc finger protein 609b
chr25_-_20666754 0.16 ENSDART00000158418
csk
C-terminal Src kinase
chr14_+_3287740 0.15 ENSDART00000186290
cdx1a
caudal type homeobox 1a
chr11_+_11303458 0.15 ENSDART00000162486
ENSDART00000160703
si:dkey-23f9.4
si:dkey-23f9.4
chr22_-_11520405 0.15 ENSDART00000063157
slc26a11
solute carrier family 26 (anion exchanger), member 11
chr9_-_6624663 0.15 ENSDART00000092537
GPR45
si:dkeyp-118h3.5
chr2_-_27619954 0.15 ENSDART00000144826
tgs1
trimethylguanosine synthase 1
chr3_-_34136368 0.14 ENSDART00000136900
ENSDART00000186125
clpp
caseinolytic mitochondrial matrix peptidase proteolytic subunit
chr21_-_40938382 0.14 ENSDART00000008593
yipf5
Yip1 domain family, member 5
chr11_-_14813029 0.13 ENSDART00000004920
ENSDART00000122645
sgta
small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr1_-_34335752 0.12 ENSDART00000140157
si:dkey-24h22.5
si:dkey-24h22.5
chr3_-_34136778 0.12 ENSDART00000131951
clpp
caseinolytic mitochondrial matrix peptidase proteolytic subunit
chr8_+_37168570 0.12 ENSDART00000098636
csf1b
colony stimulating factor 1b (macrophage)
chr11_+_41981959 0.12 ENSDART00000055707
her15.1
hairy and enhancer of split-related 15, tandem duplicate 1
chr7_+_41147732 0.12 ENSDART00000185388
puf60b
poly-U binding splicing factor b
chr25_-_20666328 0.11 ENSDART00000098076
csk
C-terminal Src kinase
chr18_-_40773413 0.11 ENSDART00000133797
vaspb
vasodilator stimulated phosphoprotein b
chr14_+_46003973 0.11 ENSDART00000145241
ENSDART00000141545
slu7
SLU7 homolog, splicing factor
chr24_-_32408404 0.11 ENSDART00000144157
si:ch211-56a11.2
si:ch211-56a11.2
chr22_+_34710473 0.10 ENSDART00000155906
hoga1
4-hydroxy-2-oxoglutarate aldolase 1
chr14_-_31465905 0.10 ENSDART00000173108
gpc3
glypican 3
chr22_+_34710036 0.10 ENSDART00000025820
hoga1
4-hydroxy-2-oxoglutarate aldolase 1
chr2_-_12243213 0.09 ENSDART00000113081
gpr158b
G protein-coupled receptor 158b
chr21_-_30166097 0.09 ENSDART00000130676
hbegfb
heparin-binding EGF-like growth factor b
chr9_-_38036984 0.09 ENSDART00000134574
hacd2
3-hydroxyacyl-CoA dehydratase 2
chr11_+_33628104 0.09 ENSDART00000165318
thsd7bb
thrombospondin, type I, domain containing 7Bb
chr17_+_8799451 0.09 ENSDART00000189814
ENSDART00000191577
tonsl
tonsoku-like, DNA repair protein
chr18_+_33276609 0.09 ENSDART00000137208
v2rx3
vomeronasal 2 receptor, x3
chr13_+_3938526 0.08 ENSDART00000012759
yipf3
Yip1 domain family, member 3
chr22_-_15385442 0.08 ENSDART00000090975
tmem264
transmembrane protein 264
chr13_-_46200240 0.08 ENSDART00000056984
ftr69
finTRIM family, member 69
chr23_+_45860676 0.07 ENSDART00000012234
syap1
synapse associated protein 1
chr4_-_75505048 0.07 ENSDART00000163665
si:dkey-71l4.5
si:dkey-71l4.5
chr9_-_44953349 0.07 ENSDART00000135156
vil1
villin 1
chr9_-_1469083 0.07 ENSDART00000144096
rbm45
RNA binding motif protein 45
chr9_+_11034314 0.07 ENSDART00000032695
asic4a
acid-sensing (proton-gated) ion channel family member 4a
chr1_+_11992 0.06 ENSDART00000161842
cep97
centrosomal protein 97
chr22_+_2793382 0.06 ENSDART00000144980
si:dkey-20i20.8
si:dkey-20i20.8
chr1_+_52633367 0.06 ENSDART00000134658
slc44a1a
solute carrier family 44 (choline transporter), member 1a
chr1_+_33634186 0.06 ENSDART00000075626
htr1fb
5-hydroxytryptamine (serotonin) receptor 1Fb
chr4_-_19028861 0.06 ENSDART00000166374
si:dkey-31f5.11
si:dkey-31f5.11
chr4_+_25431990 0.06 ENSDART00000176982
prkcq
protein kinase C, theta
chr10_+_36345176 0.06 ENSDART00000099397
or105-1
odorant receptor, family C, subfamily 105, member 1
chr21_-_7953792 0.06 ENSDART00000124486
si:dkey-163m14.10
si:dkey-163m14.10
chr3_+_40796110 0.05 ENSDART00000014729
arpc1a
actin related protein 2/3 complex, subunit 1A
chr6_+_52938534 0.05 ENSDART00000174150
BX649282.2

chr2_-_21349425 0.05 ENSDART00000171699
hhatla
hedgehog acyltransferase like, a
chr1_+_58535306 0.05 ENSDART00000165673
zgc:172091
zgc:172091
chr4_+_14826299 0.05 ENSDART00000067035
shisal1a
shisa like 1a
chr4_-_31784872 0.05 ENSDART00000182911
si:dkey-19c16.12
si:dkey-19c16.12
chr13_-_24825691 0.05 ENSDART00000142745
slka
STE20-like kinase a
chr17_-_30366705 0.04 ENSDART00000154906
si:ch211-139l2.1
si:ch211-139l2.1
chr24_+_22485710 0.04 ENSDART00000146058
si:dkey-40h20.1
si:dkey-40h20.1
chr2_+_29842878 0.04 ENSDART00000131376
si:ch211-207d6.2
si:ch211-207d6.2
chr2_-_57941037 0.04 ENSDART00000131420
si:dkeyp-68b7.5
si:dkeyp-68b7.5
chr13_+_18533005 0.04 ENSDART00000136024
ftr14l
finTRIM family, member 14-like
chr4_+_47751483 0.04 ENSDART00000160043
si:ch211-196f19.1
si:ch211-196f19.1
chr19_+_10847118 0.04 ENSDART00000189784
apoa4a
apolipoprotein A-IV a
chr13_+_25434932 0.04 ENSDART00000128562
si:dkey-51a16.9
si:dkey-51a16.9
chr21_-_26918901 0.04 ENSDART00000100685
lrfn4a
leucine rich repeat and fibronectin type III domain containing 4a
chr23_+_35650771 0.03 ENSDART00000005158
ccnt1
cyclin T1
chr17_-_49443399 0.03 ENSDART00000155293
cga
glycoprotein hormones, alpha polypeptide
chr15_-_33640890 0.03 ENSDART00000167705
stard13b
StAR-related lipid transfer (START) domain containing 13b
chr17_-_2817035 0.03 ENSDART00000152002
gpr65
G protein-coupled receptor 65
chr22_+_25672155 0.03 ENSDART00000087769
si:ch211-250e5.2
si:ch211-250e5.2
chr15_+_46357080 0.03 ENSDART00000155571
ENSDART00000156541
wu:fb18f06
wu:fb18f06
chr22_+_2504524 0.03 ENSDART00000136686
znf1170
zinc finger protein 1170
chr16_-_11798994 0.03 ENSDART00000135408
cnfn
cornifelin
chr5_-_35953472 0.02 ENSDART00000143448
rxfp2l
relaxin/insulin-like family peptide receptor 2, like
chr4_+_5848229 0.02 ENSDART00000161101
ENSDART00000067357
lyrm5a
LYR motif containing 5a
chr19_-_5265155 0.02 ENSDART00000145003
prf1.3
perforin 1.3
chr16_-_21038015 0.02 ENSDART00000059239
snx10b
sorting nexin 10b
chr2_+_6243144 0.02 ENSDART00000058258
gng5
guanine nucleotide binding protein (G protein), gamma 5
chr3_-_21288202 0.02 ENSDART00000191766
ENSDART00000187319
fam171a2a
family with sequence similarity 171, member A2a
chr15_+_24704798 0.02 ENSDART00000192470
LRRC75A
si:dkey-151p21.7
chr1_+_45121393 0.02 ENSDART00000142702
muc13a
mucin 13a, cell surface associated
chr21_+_25231160 0.02 ENSDART00000063089
ENSDART00000139127
gng8
guanine nucleotide binding protein (G protein), gamma 8
chr6_-_54107269 0.02 ENSDART00000190017
hyal2a
hyaluronoglucosaminidase 2a
chr2_-_27319914 0.02 ENSDART00000182011
dsela
dermatan sulfate epimerase-like a
chr9_-_44953664 0.02 ENSDART00000188558
ENSDART00000185210
vil1
villin 1
chr3_-_28250722 0.02 ENSDART00000165936
rbfox1
RNA binding fox-1 homolog 1
chr9_-_22339582 0.02 ENSDART00000134805
crygm2d1
crystallin, gamma M2d1
chr18_+_50523870 0.01 ENSDART00000151593
ubl7b
ubiquitin-like 7b (bone marrow stromal cell-derived)
chr20_-_10288156 0.01 ENSDART00000064110
si:dkey-63b1.1
si:dkey-63b1.1
chr15_-_16098531 0.01 ENSDART00000080377
aldoca
aldolase C, fructose-bisphosphate, a
chr24_-_21404367 0.01 ENSDART00000152093
atp8a2
ATPase phospholipid transporting 8A2
chr17_+_12698532 0.00 ENSDART00000064509
ENSDART00000136830
stmn4l
stathmin-like 4, like
chr25_+_3648497 0.00 ENSDART00000160017
CABZ01058261.1

chr1_+_11822 0.00 ENSDART00000166393
cep97
centrosomal protein 97
chr25_+_31958911 0.00 ENSDART00000191394
ENSDART00000090727
ENSDART00000185893
duox
dual oxidase
chr3_+_33341640 0.00 ENSDART00000186352
pyya
peptide YYa

Network of associatons between targets according to the STRING database.

First level regulatory network of pou6f1

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0005991 trehalose metabolic process(GO:0005991)
0.2 1.0 GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.1 0.2 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.6 GO:0043696 dedifferentiation(GO:0043696) cell dedifferentiation(GO:0043697)
0.1 0.4 GO:1900108 negative regulation of nodal signaling pathway(GO:1900108)
0.1 0.3 GO:0060368 regulation of Fc receptor mediated stimulatory signaling pathway(GO:0060368)
0.0 0.1 GO:1903646 regulation of protein folding(GO:1903332) positive regulation of protein folding(GO:1903334) regulation of chaperone-mediated protein folding(GO:1903644) positive regulation of chaperone-mediated protein folding(GO:1903646)
0.0 0.9 GO:0048251 elastic fiber assembly(GO:0048251)
0.0 0.3 GO:0003232 bulbus arteriosus development(GO:0003232)
0.0 0.2 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.9 GO:0070831 basement membrane assembly(GO:0070831)
0.0 0.3 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.2 GO:0046487 glyoxylate metabolic process(GO:0046487)
0.0 0.1 GO:0072673 lamellipodium morphogenesis(GO:0072673) regulation of lamellipodium morphogenesis(GO:2000392)
0.0 0.2 GO:0060971 embryonic heart tube left/right pattern formation(GO:0060971)
0.0 0.4 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.0 GO:0060262 N-terminal protein palmitoylation(GO:0006500) negative regulation of lipoprotein metabolic process(GO:0050748) regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060)
0.0 0.3 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.5 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.0 0.1 GO:0060976 coronary vasculature development(GO:0060976)
0.0 0.0 GO:0010893 positive regulation of steroid biosynthetic process(GO:0010893)
0.0 0.5 GO:0014046 dopamine secretion(GO:0014046) regulation of dopamine secretion(GO:0014059)
0.0 0.4 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.3 GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway(GO:0030512) negative regulation of cellular response to transforming growth factor beta stimulus(GO:1903845)
0.0 0.1 GO:2000273 positive regulation of epidermal growth factor-activated receptor activity(GO:0045741) positive regulation of receptor activity(GO:2000273)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0032545 CURI complex(GO:0032545) UTP-C complex(GO:0034456)
0.0 0.1 GO:0072380 TRC complex(GO:0072380)
0.0 0.9 GO:0005605 basal lamina(GO:0005605) laminin complex(GO:0043256)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.2 GO:0030121 AP-1 adaptor complex(GO:0030121)
0.0 0.1 GO:0032433 filopodium tip(GO:0032433)
0.0 0.4 GO:0000314 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.4 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.2 GO:0005903 brush border(GO:0005903)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.3 GO:0045180 basal cortex(GO:0045180)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0015927 alpha,alpha-trehalase activity(GO:0004555) trehalase activity(GO:0015927)
0.0 0.4 GO:0030619 U1 snRNA binding(GO:0030619)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.7 GO:0048306 calcium-dependent protein binding(GO:0048306)
0.0 0.1 GO:0018812 3-hydroxyacyl-CoA dehydratase activity(GO:0018812) 3-hydroxy-behenoyl-CoA dehydratase activity(GO:0102344) 3-hydroxy-lignoceroyl-CoA dehydratase activity(GO:0102345)
0.0 0.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.2 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.1 GO:0004865 protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0 0.1 GO:0005522 profilin binding(GO:0005522)
0.0 0.1 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.5 GO:0001786 phosphatidylserine binding(GO:0001786)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.0 0.3 PID S1P S1P2 PATHWAY S1P2 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 REACTOME DIGESTION OF DIETARY CARBOHYDRATE Genes involved in Digestion of dietary carbohydrate
0.1 0.3 REACTOME PD1 SIGNALING Genes involved in PD-1 signaling
0.0 0.3 REACTOME CD28 DEPENDENT VAV1 PATHWAY Genes involved in CD28 dependent Vav1 pathway
0.0 0.9 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling
0.0 0.3 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis