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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for ybx1

Z-value: 0.32

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Transcription factors associated with ybx1

Gene Symbol Gene ID Gene Info
ybx1
ENSDARG00000004757 Y box binding protein 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ybx1dr11_v1_chr8_-_47152001_471520860.814.4e-05Click!

Activity profile of ybx1 motif

Sorted Z-values of ybx1 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr23_+_6795531 0.60 ENSDART00000092131
si:ch211-117c9.5
si:ch211-117c9.5
chr15_+_1148074 0.54 ENSDART00000152638
ENSDART00000152466
ENSDART00000188011
mlf1
myeloid leukemia factor 1
chr11_-_30352333 0.50 ENSDART00000030794
tmem169a
transmembrane protein 169a
chr4_-_2545310 0.47 ENSDART00000150619
ENSDART00000140760
e2f7
E2F transcription factor 7
chr3_+_62317990 0.46 ENSDART00000058719
znf1124
zinc finger protein 1124
chr10_+_36026576 0.45 ENSDART00000193786
hmgb1a
high mobility group box 1a
chr23_+_6795709 0.43 ENSDART00000149136
si:ch211-117c9.5
si:ch211-117c9.5
chr10_+_39084354 0.42 ENSDART00000158245
si:ch73-1a9.3
si:ch73-1a9.3
chr22_+_17248145 0.39 ENSDART00000136908
axdnd1
axonemal dynein light chain domain containing 1
chr15_-_19677511 0.37 ENSDART00000043743
si:dkey-4p15.3
si:dkey-4p15.3
chr24_+_24923166 0.36 ENSDART00000065288
pcyt1ba
phosphate cytidylyltransferase 1, choline, beta a
chr16_+_4838808 0.36 ENSDART00000179363
ibtk
inhibitor of Bruton agammaglobulinemia tyrosine kinase
chr21_+_244503 0.35 ENSDART00000162889
stard4
StAR-related lipid transfer (START) domain containing 4
chr20_+_16743056 0.35 ENSDART00000050308
calm1b
calmodulin 1b
chr1_+_50921266 0.33 ENSDART00000006538
otx2a
orthodenticle homeobox 2a
chr7_+_24391129 0.29 ENSDART00000108753
poln
polymerase (DNA directed) nu
chr7_-_22981796 0.28 ENSDART00000167565
si:dkey-171c9.3
si:dkey-171c9.3
chr14_-_12071679 0.27 ENSDART00000165581
tmsb1
thymosin beta 1
chr6_-_34958274 0.26 ENSDART00000113097
hsd17b7
hydroxysteroid (17-beta) dehydrogenase 7
chr2_+_33747509 0.24 ENSDART00000134187
si:dkey-31m5.5
si:dkey-31m5.5
chr11_-_18604542 0.24 ENSDART00000171183
zmynd8
zinc finger, MYND-type containing 8
chr23_+_44634187 0.24 ENSDART00000143688
si:ch73-265d7.2
si:ch73-265d7.2
chr23_-_38054 0.22 ENSDART00000170393
CABZ01074076.1

chr2_+_24352497 0.22 ENSDART00000134909
pimr68
Pim proto-oncogene, serine/threonine kinase, related 68
chr10_+_43994471 0.21 ENSDART00000138242
ENSDART00000186359
cldn5b
claudin 5b
chr1_-_20928772 0.21 ENSDART00000078277
msmo1
methylsterol monooxygenase 1
chr18_+_44795711 0.21 ENSDART00000110229
ENSDART00000188262
ENSDART00000139526
fam118b
family with sequence similarity 118, member B
chr19_+_32166702 0.20 ENSDART00000021798
fabp11a
fatty acid binding protein 11a
chr18_+_21273749 0.20 ENSDART00000143265
hydin
HYDIN, axonemal central pair apparatus protein
chr11_-_18604317 0.20 ENSDART00000182081
zmynd8
zinc finger, MYND-type containing 8
chr14_+_3038473 0.20 ENSDART00000026021
ENSDART00000150000
cd74a
CD74 molecule, major histocompatibility complex, class II invariant chain a
chr4_-_16545085 0.20 ENSDART00000033188
btg1
B-cell translocation gene 1, anti-proliferative
chr25_-_3647277 0.20 ENSDART00000166363
si:ch211-272n13.3
si:ch211-272n13.3
chr1_+_26071869 0.20 ENSDART00000059264
mxd4
MAX dimerization protein 4
chr9_+_2499627 0.19 ENSDART00000160782
wipf1a
WAS/WASL interacting protein family, member 1a
chr22_+_38173960 0.19 ENSDART00000010537
cp
ceruloplasmin
chr5_+_70155935 0.19 ENSDART00000165570
rgs3a
regulator of G protein signaling 3a
chr1_+_51386649 0.18 ENSDART00000152289
atg4da
autophagy related 4D, cysteine peptidase a
chr10_+_9159279 0.18 ENSDART00000064968
rasgef1bb
RasGEF domain family, member 1Bb
chr19_+_770300 0.18 ENSDART00000062518
gstr
glutathione S-transferase rho
chr12_+_46960579 0.18 ENSDART00000149032
oat
ornithine aminotransferase
chr25_+_36405021 0.18 ENSDART00000152801
ankrd27
ankyrin repeat domain 27 (VPS9 domain)
chr24_-_41220538 0.18 ENSDART00000150207
acvr2ba
activin A receptor type 2Ba
chr3_-_8765165 0.18 ENSDART00000191131
CABZ01058333.1

chr25_+_10458990 0.18 ENSDART00000130354
ENSDART00000044738
ric8a
RIC8 guanine nucleotide exchange factor A
chr10_+_35257651 0.18 ENSDART00000028940
styxl1
serine/threonine/tyrosine interacting-like 1
chr6_-_35446110 0.18 ENSDART00000058773
rgs16
regulator of G protein signaling 16
chr18_+_50089000 0.18 ENSDART00000058936
scamp5b
secretory carrier membrane protein 5b
chr5_-_68074592 0.17 ENSDART00000165052
ENSDART00000018792
spag7
sperm associated antigen 7
chr9_+_13120419 0.17 ENSDART00000141005
fam117bb
family with sequence similarity 117, member Bb
chr19_+_56351 0.17 ENSDART00000168334
col14a1b
collagen, type XIV, alpha 1b
chr15_+_43166511 0.17 ENSDART00000011737
flj13639
flj13639
chr19_-_1855368 0.17 ENSDART00000029646
rplp1
ribosomal protein, large, P1
chr22_-_36875264 0.16 ENSDART00000137548
kng1
kininogen 1
chr24_-_39772045 0.16 ENSDART00000087441
GFOD1
si:ch211-276f18.2
chr18_+_62932 0.16 ENSDART00000052638
slc27a2a
solute carrier family 27 (fatty acid transporter), member 2a
chr8_+_53269657 0.16 ENSDART00000184212
gnb1a
guanine nucleotide binding protein (G protein), beta polypeptide 1a
chr12_+_8822717 0.16 ENSDART00000021628
reep3b
receptor accessory protein 3b
chr12_-_35885349 0.16 ENSDART00000085662
cep131
centrosomal protein 131
chr12_-_33582382 0.15 ENSDART00000009794
ENSDART00000136617
tdrkh
tudor and KH domain containing
chr7_+_1521834 0.15 ENSDART00000174007
si:cabz01102082.1
si:cabz01102082.1
chr25_+_4541211 0.15 ENSDART00000129978
pnpla2
patatin-like phospholipase domain containing 2
chr4_+_11375894 0.15 ENSDART00000190471
ENSDART00000143963
pcloa
piccolo presynaptic cytomatrix protein a
chr18_+_30567945 0.15 ENSDART00000078894
irf8
interferon regulatory factor 8
chr23_-_35483163 0.14 ENSDART00000138660
ENSDART00000113643
ENSDART00000189269
fbxo25
F-box protein 25
chr4_-_8060962 0.14 ENSDART00000146622
wnk1b
WNK lysine deficient protein kinase 1b
chr4_+_4509996 0.14 ENSDART00000028694
gnsa
glucosamine (N-acetyl)-6-sulfatase a
chr7_+_22981441 0.14 ENSDART00000182887
ccnb3
cyclin B3
chr20_-_54259780 0.14 ENSDART00000172631
fkbp3
FK506 binding protein 3
chr1_+_49651016 0.14 ENSDART00000074380
ENSDART00000101017
tsga10
testis specific, 10
chr1_+_58840889 0.14 ENSDART00000098308
tmed1b
transmembrane p24 trafficking protein 1b
chr5_+_31983098 0.14 ENSDART00000007458
ppp6c
protein phosphatase 6, catalytic subunit
chr25_-_4148719 0.14 ENSDART00000112880
ENSDART00000023278
fads2
fatty acid desaturase 2
chr6_+_52350443 0.14 ENSDART00000151612
ENSDART00000151349
si:ch211-239j9.1
si:ch211-239j9.1
chr1_+_54037077 0.13 ENSDART00000109386
triobpa
TRIO and F-actin binding protein a
chr19_-_6134802 0.13 ENSDART00000140051
cica
capicua transcriptional repressor a
chr14_+_80685 0.13 ENSDART00000188443
stag3
stromal antigen 3
chr24_+_7631797 0.13 ENSDART00000187464
cavin1b
caveolae associated protein 1b
chr7_+_22981909 0.13 ENSDART00000122449
ccnb3
cyclin B3
chr3_+_62217479 0.13 ENSDART00000175012
BX470259.4

chr20_+_37866171 0.13 ENSDART00000153190
vash2
vasohibin 2
chr19_-_26769867 0.13 ENSDART00000043776
ENSDART00000159489
ENSDART00000138675
prrc2a
proline-rich coiled-coil 2A
chr20_+_47434709 0.13 ENSDART00000067776
rab10
RAB10, member RAS oncogene family
chr19_-_26770083 0.12 ENSDART00000193811
ENSDART00000174455
prrc2a
proline-rich coiled-coil 2A
chr25_-_35110695 0.12 ENSDART00000099859
hist1h2a10
histone cluster 1 H2A family member 10
chr21_+_19070921 0.12 ENSDART00000029874
nkx6.1
NK6 homeobox 1
chr18_+_22606259 0.12 ENSDART00000128965
bcar1
breast cancer anti-estrogen resistance 1
chr25_-_3470910 0.11 ENSDART00000029067
ENSDART00000186737
hbp1
HMG-box transcription factor 1
chr9_+_29548195 0.11 ENSDART00000176057
rnf17
ring finger protein 17
chr23_-_46034609 0.11 ENSDART00000158712
zgc:65873
zgc:65873
chr6_-_16981321 0.11 ENSDART00000154585
pimr29
Pim proto-oncogene, serine/threonine kinase, related 29
chr4_-_76370630 0.11 ENSDART00000168831
ENSDART00000174313
si:ch73-158p21.3
si:ch73-158p21.3
chr22_-_16180467 0.11 ENSDART00000171331
ENSDART00000185607
vcam1b
vascular cell adhesion molecule 1b
chr1_+_25801648 0.10 ENSDART00000129471
gucy1b1
guanylate cyclase 1 soluble subunit beta 1
chr21_-_26490186 0.10 ENSDART00000009889
zgc:110540
zgc:110540
chr12_+_10706772 0.10 ENSDART00000158227
top2a
DNA topoisomerase II alpha
chr24_-_24271629 0.10 ENSDART00000135060
rps6ka3b
ribosomal protein S6 kinase, polypeptide 3b
chr1_-_50527964 0.10 ENSDART00000024984
papss1
3'-phosphoadenosine 5'-phosphosulfate synthase 1
chr7_+_22982201 0.10 ENSDART00000134116
ccnb3
cyclin B3
chr21_-_293146 0.10 ENSDART00000157781
plgrkt
plasminogen receptor, C-terminal lysine transmembrane protein
chr17_-_43287290 0.10 ENSDART00000156885
EML5
si:dkey-1f12.3
chr3_-_3328097 0.10 ENSDART00000193140
tmem184bb
transmembrane protein 184bb
chr11_+_35050253 0.10 ENSDART00000124800
fam212aa
family with sequence similarity 212, member Aa
chr10_+_29816681 0.10 ENSDART00000100022
h2afx1
H2A histone family member X1
chr22_-_22301672 0.09 ENSDART00000111711
chaf1a
chromatin assembly factor 1, subunit A (p150)
chr6_+_16804761 0.09 ENSDART00000155204
pimr6
Pim proto-oncogene, serine/threonine kinase, related 6
chr5_+_45138934 0.09 ENSDART00000041412
ENSDART00000136002
smarca2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr3_+_62353650 0.09 ENSDART00000112428
iqck
IQ motif containing K
chr20_-_53366137 0.09 ENSDART00000146001
wasf1
WAS protein family, member 1
chr18_-_3166726 0.09 ENSDART00000165002
aqp11
aquaporin 11
chr6_+_37752781 0.09 ENSDART00000154364
herc2
HECT and RLD domain containing E3 ubiquitin protein ligase 2
chr10_+_22782522 0.09 ENSDART00000079498
ENSDART00000145558
si:ch211-237l4.6
si:ch211-237l4.6
chr18_+_16986903 0.09 ENSDART00000142088
si:ch211-218c6.8
si:ch211-218c6.8
chr3_-_13147310 0.09 ENSDART00000160840
prkar1b
protein kinase, cAMP-dependent, regulatory, type I, beta
chr22_+_36875400 0.08 ENSDART00000158293
mccc1
methylcrotonoyl-CoA carboxylase 1 (alpha)
chr6_-_48094342 0.08 ENSDART00000137458
slc2a1b
solute carrier family 2 (facilitated glucose transporter), member 1b
chr3_-_5964557 0.08 ENSDART00000184738
BX284638.1

chr25_+_35051656 0.08 ENSDART00000133379
hist2h3c
histone cluster 2, H3c
chr9_+_27411502 0.08 ENSDART00000143994
si:dkey-193n17.9
si:dkey-193n17.9
chr13_+_12671513 0.08 ENSDART00000010517
eif4eb
eukaryotic translation initiation factor 4eb
chr14_-_8903435 0.08 ENSDART00000160584
zgc:153681
zgc:153681
chr16_-_12095144 0.08 ENSDART00000145106
pex5
peroxisomal biogenesis factor 5
chr12_-_48671612 0.08 ENSDART00000007202
zgc:92749
zgc:92749
chr10_+_44903676 0.08 ENSDART00000158553
zgc:114173
zgc:114173
chr15_-_6615555 0.08 ENSDART00000152725
atm
ATM serine/threonine kinase
chr23_-_2037566 0.08 ENSDART00000191312
ENSDART00000127443
prdm5
PR domain containing 5
chr1_-_18803919 0.08 ENSDART00000020970
pgm2
phosphoglucomutase 2
chr6_+_102506 0.07 ENSDART00000172678
ldlrb
low density lipoprotein receptor b
chr3_-_3327573 0.07 ENSDART00000136319
ENSDART00000166667
tmem184bb
transmembrane protein 184bb
chr5_+_24086227 0.07 ENSDART00000051549
ENSDART00000177458
ENSDART00000135934
tp53
tumor protein p53
chr15_-_19250543 0.07 ENSDART00000092705
ENSDART00000138895
igsf9ba
immunoglobulin superfamily, member 9Ba
chr25_-_19433244 0.07 ENSDART00000154778
map1ab
microtubule-associated protein 1Ab
chr22_-_12693833 0.07 ENSDART00000129768
ENSDART00000044574
adarb1a
adenosine deaminase, RNA-specific, B1a
chr18_-_18942098 0.07 ENSDART00000100458
si:dkey-73n10.1
si:dkey-73n10.1
chr13_+_4440869 0.07 ENSDART00000156323
tbxtb
T-box transcription factor Tb
chr11_+_45436703 0.07 ENSDART00000168295
ENSDART00000173293
sos1
son of sevenless homolog 1 (Drosophila)
chr18_-_2549198 0.07 ENSDART00000186516
CABZ01070631.1

chr6_-_50704689 0.07 ENSDART00000074100
osgn1
oxidative stress induced growth inhibitor 1
chr4_+_308697 0.06 ENSDART00000174021
ENSDART00000131419
ENSDART00000067489
si:ch211-51e12.7
si:ch211-51e12.7
chr8_+_8927870 0.06 ENSDART00000081985
pim2
Pim-2 proto-oncogene, serine/threonine kinase
chr8_-_44015210 0.06 ENSDART00000186879
ENSDART00000188965
ENSDART00000001313
ENSDART00000188902
ENSDART00000185935
ENSDART00000147869
rimbp2
rimbp2
RIMS binding protein 2
RIMS binding protein 2
chr25_-_6389713 0.06 ENSDART00000083539
sin3aa
SIN3 transcription regulator family member Aa
chr7_-_18617187 0.06 ENSDART00000172419
si:ch211-119e14.1
si:ch211-119e14.1
chr18_+_660578 0.06 ENSDART00000161203
CELF6
si:dkey-205h23.2
chr12_+_25432627 0.06 ENSDART00000011662
ppm1bb
protein phosphatase, Mg2+/Mn2+ dependent, 1Bb
chr19_-_10881141 0.06 ENSDART00000162793
psmd4a
proteasome 26S subunit, non-ATPase 4a
chr2_+_58877162 0.06 ENSDART00000122174
CABZ01085658.1

chr3_+_17878466 0.05 ENSDART00000180218
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7
chr23_-_41651759 0.05 ENSDART00000146808
si:ch73-184c24.1
si:ch73-184c24.1
chr16_+_6750289 0.05 ENSDART00000167736
znf236
zinc finger protein 236
chr3_+_1492174 0.05 ENSDART00000112979
sox10
SRY (sex determining region Y)-box 10
chr14_-_970853 0.05 ENSDART00000130801
acsl1b
acyl-CoA synthetase long chain family member 1b
chr7_-_69636502 0.05 ENSDART00000126739
tspan5a
tetraspanin 5a
chr6_-_218882 0.05 ENSDART00000008398
c1qtnf6b
C1q and TNF related 6b
chr3_-_62403550 0.05 ENSDART00000055055
sox8b
SRY (sex determining region Y)-box 8b
chr3_+_17878124 0.05 ENSDART00000166430
ENSDART00000163421
ENSDART00000121473
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7
chr16_-_44349845 0.05 ENSDART00000170932
rims2a
regulating synaptic membrane exocytosis 2a
chr25_+_35553542 0.05 ENSDART00000113723
spi1a
Spi-1 proto-oncogene a
chr23_+_2778813 0.05 ENSDART00000142621
top1
DNA topoisomerase I
chr25_-_36361697 0.05 ENSDART00000152388
si:ch211-113a14.22
si:ch211-113a14.22
chr10_-_15644904 0.05 ENSDART00000138389
ENSDART00000101191
ENSDART00000186559
ENSDART00000122170
smc5
structural maintenance of chromosomes 5
chr3_-_21062706 0.05 ENSDART00000155605
ENSDART00000153686
ENSDART00000157168
ENSDART00000156614
ENSDART00000155743
ENSDART00000156275
fam57ba
family with sequence similarity 57, member Ba
chr5_-_14500622 0.05 ENSDART00000099566
si:ch211-244o22.2
si:ch211-244o22.2
chr2_-_42091926 0.04 ENSDART00000142663
si:dkey-97a13.12
si:dkey-97a13.12
chr18_-_49116382 0.04 ENSDART00000174157
BX663503.3

chr24_-_39186185 0.04 ENSDART00000123019
ENSDART00000191114
nubp2
nucleotide binding protein 2 (MinD homolog, E. coli)
chr11_-_40519886 0.04 ENSDART00000172819
miip
migration and invasion inhibitory protein
chr7_-_6466119 0.04 ENSDART00000173138
zgc:112234
zgc:112234
chr11_+_18612166 0.04 ENSDART00000162694
ncoa3
nuclear receptor coactivator 3
chr7_+_57108823 0.04 ENSDART00000184943
ENSDART00000055956
enosf1
enolase superfamily member 1
chr4_+_29967255 0.04 ENSDART00000150383
znf1128
zinc finger protein 1128
chr10_-_35236949 0.04 ENSDART00000145804
ypel2a
yippee-like 2a
chr16_+_45930962 0.04 ENSDART00000124689
ENSDART00000041811
otud7b
OTU deubiquitinase 7B
chr6_+_56147812 0.04 ENSDART00000150219
tfap2c
transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
chr1_+_54069450 0.04 ENSDART00000108601
ENSDART00000187878
dcaf15
DDB1 and CUL4 associated factor 15
chr7_-_31794476 0.04 ENSDART00000142385
nap1l4b
nucleosome assembly protein 1-like 4b
chr5_+_42092227 0.04 ENSDART00000097583
ENSDART00000171678
ubb
ubiquitin B
chr21_-_12119711 0.04 ENSDART00000131538
celf4
CUGBP, Elav-like family member 4
chr13_-_30645965 0.04 ENSDART00000109307
zcchc24
zinc finger, CCHC domain containing 24
chr13_+_42602406 0.04 ENSDART00000133388
ENSDART00000147996
mlh1
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
chr11_+_77526 0.04 ENSDART00000193521
CABZ01072242.1

chr1_-_20271138 0.04 ENSDART00000185931
ndst3
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
chr11_-_42554290 0.04 ENSDART00000130573
atp6ap1la
ATPase H+ transporting accessory protein 1 like a
chr13_-_856525 0.03 ENSDART00000143356
TMEM14A
zgc:163080
chr16_-_52646789 0.03 ENSDART00000035761
ubr5
ubiquitin protein ligase E3 component n-recognin 5
chr6_+_3710865 0.03 ENSDART00000170781
phospho2
phosphatase, orphan 2
chr11_+_440305 0.03 ENSDART00000082517
rab43
RAB43, member RAS oncogene family
chr4_-_240737 0.03 ENSDART00000166186
RERG
si:cabz01085950.1
chr15_+_26941063 0.03 ENSDART00000149957
bcas3
breast carcinoma amplified sequence 3
chr23_+_37185247 0.03 ENSDART00000146269
vwa5b1
von Willebrand factor A domain containing 5B1
chr19_-_10881486 0.03 ENSDART00000168852
ENSDART00000160438
PSMD4 (1 of many)
psmd4a
proteasome 26S subunit, non-ATPase 4
proteasome 26S subunit, non-ATPase 4a
chr1_-_9644630 0.03 ENSDART00000123725
ENSDART00000161164
ugt5b3
UDP glucuronosyltransferase 5 family, polypeptide B3
chr22_-_4439311 0.03 ENSDART00000169317
uhrf1
ubiquitin-like with PHD and ring finger domains 1
chr17_-_31221655 0.03 ENSDART00000145010
ENSDART00000137834
ENSDART00000132858
pcmtl
l-isoaspartyl protein carboxyl methyltransferase, like
chr21_+_5888641 0.03 ENSDART00000091331
prodha
proline dehydrogenase (oxidase) 1a
chr15_-_31177324 0.03 ENSDART00000008854
wsb1
WD repeat and SOCS box containing 1
chr3_-_1146497 0.03 ENSDART00000149061
si:ch73-211l13.2
si:ch73-211l13.2
chr23_+_14590483 0.03 ENSDART00000088359
ENSDART00000184868
si:rp71-79p20.2
si:rp71-79p20.2
chr6_+_8622228 0.03 ENSDART00000110470
tspeara
thrombospondin-type laminin G domain and EAR repeats a
chr13_-_856701 0.03 ENSDART00000140423
TMEM14A
zgc:163080

Network of associatons between targets according to the STRING database.

First level regulatory network of ybx1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0032877 regulation of DNA endoreduplication(GO:0032875) positive regulation of DNA endoreduplication(GO:0032877) DNA endoreduplication(GO:0042023)
0.1 0.4 GO:0070508 sterol import(GO:0035376) cholesterol import(GO:0070508)
0.1 0.3 GO:0070987 error-free translesion synthesis(GO:0070987)
0.1 0.2 GO:0002468 dendritic cell antigen processing and presentation(GO:0002468) macrophage cytokine production(GO:0010934) regulation of macrophage cytokine production(GO:0010935) positive regulation of macrophage cytokine production(GO:0060907) negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.1 0.2 GO:0071470 cellular response to osmotic stress(GO:0071470)
0.0 0.1 GO:0045649 regulation of macrophage differentiation(GO:0045649)
0.0 0.2 GO:2001244 positive regulation of intrinsic apoptotic signaling pathway(GO:2001244)
0.0 0.2 GO:0030575 nuclear body organization(GO:0030575) Cajal body organization(GO:0030576)
0.0 0.2 GO:0010896 regulation of triglyceride catabolic process(GO:0010896) positive regulation of triglyceride catabolic process(GO:0010898)
0.0 0.2 GO:2000051 regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591) negative regulation of non-canonical Wnt signaling pathway(GO:2000051)
0.0 0.1 GO:0050428 sulfate assimilation(GO:0000103) purine ribonucleoside bisphosphate metabolic process(GO:0034035) purine ribonucleoside bisphosphate biosynthetic process(GO:0034036) 3'-phosphoadenosine 5'-phosphosulfate metabolic process(GO:0050427) 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process(GO:0050428)
0.0 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.1 GO:0099548 trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by nitric oxide(GO:0099548)
0.0 0.1 GO:0010755 regulation of plasminogen activation(GO:0010755)
0.0 0.1 GO:0032197 regulation of transposition, RNA-mediated(GO:0010525) negative regulation of transposition, RNA-mediated(GO:0010526) transposition, RNA-mediated(GO:0032197) positive regulation of neuron apoptotic process(GO:0043525) positive regulation of neuron death(GO:1901216)
0.0 0.2 GO:1900047 negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047)
0.0 0.2 GO:0035735 intraciliary transport involved in cilium morphogenesis(GO:0035735)
0.0 0.4 GO:0009409 response to cold(GO:0009409)
0.0 0.2 GO:0055129 arginine catabolic process(GO:0006527) proline biosynthetic process(GO:0006561) L-proline biosynthetic process(GO:0055129)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.3 GO:0003406 retinal pigment epithelium development(GO:0003406)
0.0 0.2 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 0.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.2 GO:0021694 cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0 0.1 GO:0090527 actin filament reorganization(GO:0090527)
0.0 0.1 GO:1904071 presynaptic active zone assembly(GO:1904071)
0.0 0.5 GO:0010389 regulation of G2/M transition of mitotic cell cycle(GO:0010389)
0.0 0.2 GO:0045022 early endosome to late endosome transport(GO:0045022) vesicle-mediated transport between endosomal compartments(GO:0098927)
0.0 0.0 GO:0051026 chiasma assembly(GO:0051026)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.2 GO:0042613 MHC class II protein complex(GO:0042613)
0.0 0.1 GO:0033186 CAF-1 complex(GO:0033186)
0.0 0.2 GO:0001669 acrosomal vesicle(GO:0001669)
0.0 0.1 GO:0098982 GABA-ergic synapse(GO:0098982)
0.0 0.2 GO:0048179 activin receptor complex(GO:0048179)
0.0 0.1 GO:0032593 insulin-responsive compartment(GO:0032593)
0.0 0.2 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.2 GO:0015030 Cajal body(GO:0015030)
0.0 0.1 GO:0033181 plasma membrane proton-transporting V-type ATPase complex(GO:0033181)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0004105 choline-phosphate cytidylyltransferase activity(GO:0004105)
0.1 0.5 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217)
0.0 0.2 GO:0043295 glutathione binding(GO:0043295)
0.0 0.1 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0004779 adenylylsulfate kinase activity(GO:0004020) sulfate adenylyltransferase activity(GO:0004779) sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.1 GO:0042134 rRNA primary transcript binding(GO:0042134)
0.0 0.2 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0004485 methylcrotonoyl-CoA carboxylase activity(GO:0004485)
0.0 0.4 GO:0008301 DNA binding, bending(GO:0008301)
0.0 0.4 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.2 GO:0001965 G-protein alpha-subunit binding(GO:0001965)
0.0 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.2 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0 0.1 GO:0008603 cAMP-dependent protein kinase regulator activity(GO:0008603)
0.0 0.1 GO:0055056 D-glucose transmembrane transporter activity(GO:0055056)
0.0 0.2 GO:0017002 activin-activated receptor activity(GO:0017002)
0.0 0.4 GO:0051018 protein kinase A binding(GO:0051018)
0.0 0.2 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.0 0.2 GO:0031682 G-protein gamma-subunit binding(GO:0031682)
0.0 0.1 GO:0005052 peroxisome matrix targeting signal-1 binding(GO:0005052)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID INTEGRIN A4B1 PATHWAY Alpha4 beta1 integrin signaling events
0.0 0.8 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules
0.0 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.1 REACTOME GRB2 SOS PROVIDES LINKAGE TO MAPK SIGNALING FOR INTERGRINS Genes involved in GRB2:SOS provides linkage to MAPK signaling for Intergrins
0.0 0.3 REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D Genes involved in Metabolism of steroid hormones and vitamins A and D
0.0 0.2 REACTOME INTRINSIC PATHWAY Genes involved in Intrinsic Pathway
0.0 0.2 REACTOME IRON UPTAKE AND TRANSPORT Genes involved in Iron uptake and transport