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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for znf143b

Z-value: 0.34

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Transcription factors associated with znf143b

Gene Symbol Gene ID Gene Info
znf143b
ENSDARG00000041581 zinc finger protein 143b
znf143b
ENSDARG00000111018 zinc finger protein 143b
znf143b
ENSDARG00000112408 zinc finger protein 143b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
znf143bdr11_v1_chr18_-_16937008_169371090.911.3e-07Click!

Activity profile of znf143b motif

Sorted Z-values of znf143b motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr21_-_43636595 1.05 ENSDART00000151115
ENSDART00000151486
ENSDART00000151778
si:ch1073-263o8.2
si:ch1073-263o8.2
chr10_-_8079737 0.82 ENSDART00000059014
ENSDART00000179549
zgc:173443
si:ch211-251f6.6
zgc:173443
si:ch211-251f6.6
chr3_-_3448095 0.70 ENSDART00000078886
A2ML1 (1 of many)
si:dkey-46g23.5
chr9_-_1639884 0.56 ENSDART00000062850
ENSDART00000150947
agps
alkylglycerone phosphate synthase
chr17_+_46387086 0.53 ENSDART00000157079
si:dkey-206p8.1
si:dkey-206p8.1
chr23_+_7692042 0.51 ENSDART00000018512
pofut1
protein O-fucosyltransferase 1
chr16_+_31511739 0.50 ENSDART00000049420
ndrg1b
N-myc downstream regulated 1b
chr17_+_22760126 0.50 ENSDART00000151999
ENSDART00000190442
ttc27
tetratricopeptide repeat domain 27
chr15_-_47193564 0.45 ENSDART00000172453
LSAMP
limbic system-associated membrane protein
chr12_-_1034383 0.45 ENSDART00000152455
ENSDART00000152346
polr3e
polymerase (RNA) III (DNA directed) polypeptide E
chr9_+_14028157 0.43 ENSDART00000134603
si:ch211-67e16.4
si:ch211-67e16.4
chr9_-_8297344 0.42 ENSDART00000180945
si:ch211-145c1.1
si:ch211-145c1.1
chr9_-_55946377 0.37 ENSDART00000161536
ENSDART00000169432
SH3RF3
si:ch211-124n19.2
chr8_+_54263946 0.37 ENSDART00000193119
TMCC1 (1 of many)
transmembrane and coiled-coil domain family 1
chr21_+_7131970 0.36 ENSDART00000161921
zgc:113019
zgc:113019
chr21_+_7605803 0.35 ENSDART00000121813
wdr41
WD repeat domain 41
chr25_+_8925934 0.35 ENSDART00000073914
accs
1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
chr9_-_11676491 0.35 ENSDART00000022358
zc3h15
zinc finger CCCH-type containing 15
chr15_-_41245962 0.34 ENSDART00000155359
smco4
single-pass membrane protein with coiled-coil domains 4
chr15_-_28805493 0.34 ENSDART00000179617
cd3eap
CD3e molecule, epsilon associated protein
chr4_-_9780931 0.34 ENSDART00000134280
ENSDART00000150664
ENSDART00000150304
ENSDART00000080744
svopl
SVOP-like
chr19_-_34970312 0.34 ENSDART00000102896
ndrg1a
N-myc downstream regulated 1a
chr18_+_18000887 0.33 ENSDART00000147797
si:ch211-212o1.2
si:ch211-212o1.2
chr3_+_1219344 0.33 ENSDART00000161945
rrp7a
ribosomal RNA processing 7 homolog A
chr19_+_40069524 0.33 ENSDART00000151365
ENSDART00000140926
zmym4
zinc finger, MYM-type 4
chr3_-_34816893 0.32 ENSDART00000084448
ENSDART00000154696
psmd11a
proteasome 26S subunit, non-ATPase 11a
chr13_-_51846224 0.32 ENSDART00000184663
LT631684.2

chr24_-_26622423 0.31 ENSDART00000182044
tnikb
TRAF2 and NCK interacting kinase b
chr7_-_8344243 0.31 ENSDART00000149510
f13a1b
coagulation factor XIII, A1 polypeptide b
chr3_+_35608385 0.31 ENSDART00000193219
ENSDART00000132703
traf7
TNF receptor-associated factor 7
chr18_-_8380090 0.30 ENSDART00000141581
ENSDART00000081143
sephs1
selenophosphate synthetase 1
chr4_+_14981854 0.30 ENSDART00000067046
cax1
cation/H+ exchanger protein 1
chr15_-_1622468 0.28 ENSDART00000149008
ENSDART00000034456
kpna4
karyopherin alpha 4 (importin alpha 3)
chr15_+_24676905 0.27 ENSDART00000078014
ENSDART00000143137
poldip2
polymerase (DNA-directed), delta interacting protein 2
chr19_-_7358184 0.26 ENSDART00000092379
oxr1b
oxidation resistance 1b
chr14_+_32852388 0.26 ENSDART00000166351
nkrf
NFKB repressing factor
chr14_-_30876708 0.25 ENSDART00000147597
ubl3b
ubiquitin-like 3b
chr14_+_16287968 0.24 ENSDART00000106593
prpf19
pre-mRNA processing factor 19
chr2_-_1227221 0.24 ENSDART00000130897
ABCF3
ATP binding cassette subfamily F member 3
chr18_+_18000695 0.24 ENSDART00000146898
si:ch211-212o1.2
si:ch211-212o1.2
chr5_+_30089715 0.24 ENSDART00000078114
timm8b
translocase of inner mitochondrial membrane 8 homolog B (yeast)
chr16_-_8132742 0.23 ENSDART00000104323
snrka
SNF related kinase a
chr3_-_50066499 0.23 ENSDART00000056618
ENSDART00000154561
mrpl12
mitochondrial ribosomal protein L12
chr3_-_40301467 0.23 ENSDART00000055186
atp5mf
ATP synthase membrane subunit f
chr2_-_34138064 0.23 ENSDART00000133381
cenpl
centromere protein L
chr1_+_53279861 0.22 ENSDART00000035713
rnf150a
ring finger protein 150a
chr15_-_6966221 0.22 ENSDART00000165487
ENSDART00000027657
mrps22
mitochondrial ribosomal protein S22
chr9_+_26086135 0.22 ENSDART00000011910
arglu1a
arginine and glutamate rich 1a
chr4_-_4834617 0.22 ENSDART00000141539
coa6
cytochrome c oxidase assembly factor 6
chr18_+_49969568 0.22 ENSDART00000126916
mob2b
MOB kinase activator 2b
chr13_-_46687097 0.21 ENSDART00000169106
ENSDART00000158202
CABZ01078449.1

chr5_-_32383475 0.21 ENSDART00000141294
fbxw2
F-box and WD repeat domain containing 2
chr4_-_4834347 0.21 ENSDART00000141803
coa6
cytochrome c oxidase assembly factor 6
chr19_+_43715911 0.21 ENSDART00000006344
cap1
CAP, adenylate cyclase-associated protein 1 (yeast)
chr7_-_62003831 0.21 ENSDART00000113585
ENSDART00000062704
plaa
phospholipase A2-activating protein
chr14_-_30876299 0.21 ENSDART00000180305
ubl3b
ubiquitin-like 3b
chr10_-_40826657 0.20 ENSDART00000076304
pcna
proliferating cell nuclear antigen
chr19_-_33996277 0.20 ENSDART00000159384
elmo1
engulfment and cell motility 1 (ced-12 homolog, C. elegans)
chr16_+_19637384 0.20 ENSDART00000184773
ENSDART00000191895
ENSDART00000182020
ENSDART00000135359
macc1
metastasis associated in colon cancer 1
chr2_-_37537887 0.20 ENSDART00000143496
ENSDART00000025841
arhgef18a
rho/rac guanine nucleotide exchange factor (GEF) 18a
chr14_+_32926385 0.19 ENSDART00000139159
lnx2b
ligand of numb-protein X 2b
chr10_-_35186310 0.19 ENSDART00000127805
pom121
POM121 transmembrane nucleoporin
chr19_+_15521997 0.19 ENSDART00000003164
ppp1r8a
protein phosphatase 1, regulatory subunit 8a
chr17_+_37253706 0.19 ENSDART00000076004
tmem62
transmembrane protein 62
chr4_+_288633 0.19 ENSDART00000183304
FO834823.1

chr5_+_34549845 0.19 ENSDART00000139317
aif1l
allograft inflammatory factor 1-like
chr15_+_44184367 0.19 ENSDART00000162918
ENSDART00000110060
zgc:165514
zgc:165514
chr3_+_18050667 0.19 ENSDART00000035531
mettl26
methyltransferase like 26
chr13_+_30506781 0.19 ENSDART00000110884
zmiz1a
zinc finger, MIZ-type containing 1a
chr21_+_30007566 0.19 ENSDART00000149124
ENSDART00000150071
ttc1
tetratricopeptide repeat domain 1
chr1_-_21563040 0.19 ENSDART00000049572
ncapd3
non-SMC condensin II complex, subunit D3
chr16_+_30604387 0.19 ENSDART00000058785
fam210ab
family with sequence similarity 210, member Ab
chr15_-_9257136 0.19 ENSDART00000187901
calm2a
calmodulin 2a (phosphorylase kinase, delta)
chr6_+_12482599 0.19 ENSDART00000090316
stk24b
serine/threonine kinase 24b (STE20 homolog, yeast)
chr22_+_20172018 0.18 ENSDART00000188104
hmg20b
high mobility group 20B
chr6_-_6993046 0.18 ENSDART00000053304
si:ch211-114n24.6
si:ch211-114n24.6
chr2_+_31437547 0.17 ENSDART00000141170
stam
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
chr22_+_38919265 0.17 ENSDART00000148051
senp5
SUMO1/sentrin specific peptidase 5
chr16_+_46401756 0.17 ENSDART00000147370
ENSDART00000144000
rpz2
rapunzel 2
chr10_-_27009413 0.17 ENSDART00000139942
ENSDART00000146983
ENSDART00000132352
uqcc3
ubiquinol-cytochrome c reductase complex assembly factor 3
chr23_-_4019699 0.17 ENSDART00000159780
slc9a8
solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
chr17_-_14780578 0.16 ENSDART00000154690
si:ch211-266o15.1
si:ch211-266o15.1
chr23_-_4019928 0.16 ENSDART00000021062
slc9a8
solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
chr22_-_506522 0.15 ENSDART00000106645
ENSDART00000067637
dstyk
dual serine/threonine and tyrosine protein kinase
chr19_+_31532043 0.15 ENSDART00000136289
tmem64
transmembrane protein 64
chr9_+_20869166 0.15 ENSDART00000147892
wdr3
WD repeat domain 3
chr4_+_1619584 0.15 ENSDART00000148486
scaf11
SR-related CTD-associated factor 11
chr16_-_39267185 0.15 ENSDART00000058550
ENSDART00000133642
gpd1l
glycerol-3-phosphate dehydrogenase 1 like
chr15_+_25452092 0.14 ENSDART00000009545
pak4
p21 protein (Cdc42/Rac)-activated kinase 4
chr19_-_12648122 0.14 ENSDART00000151184
fam210aa
family with sequence similarity 210, member Aa
chr5_-_68641353 0.14 ENSDART00000048432
dlg4a
discs, large homolog 4a (Drosophila)
chr5_+_23136544 0.13 ENSDART00000003428
ENSDART00000109340
ENSDART00000171039
ENSDART00000178821
prps1a
phosphoribosyl pyrophosphate synthetase 1A
chr13_-_27620815 0.13 ENSDART00000139904
kcnq5a
potassium voltage-gated channel, KQT-like subfamily, member 5a
chr10_-_36618674 0.13 ENSDART00000135302
rsf1b.1
remodeling and spacing factor 1b, tandem duplicate 1
chr25_+_12012 0.13 ENSDART00000170348
cntn1a
contactin 1a
chr7_-_34184282 0.13 ENSDART00000183284
smad6a
SMAD family member 6a
chr6_-_17999776 0.13 ENSDART00000183048
ENSDART00000181577
ENSDART00000170597
rptor
regulatory associated protein of MTOR, complex 1
chr2_-_34138400 0.13 ENSDART00000056667
cenpl
centromere protein L
chr5_+_34549365 0.12 ENSDART00000009500
aif1l
allograft inflammatory factor 1-like
chr3_-_18384501 0.12 ENSDART00000027630
kdelr2a
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a
chr2_+_47718605 0.12 ENSDART00000189180
ENSDART00000148824
mbnl1
muscleblind-like splicing regulator 1
chr20_-_9428021 0.12 ENSDART00000025330
rdh14b
retinol dehydrogenase 14b
chr10_-_36633882 0.12 ENSDART00000077161
ENSDART00000137688
rsf1b.1
rsf1b.1
remodeling and spacing factor 1b, tandem duplicate 1
remodeling and spacing factor 1b, tandem duplicate 1
chr25_-_13871118 0.12 ENSDART00000160866
cry2
cryptochrome circadian clock 2
chr5_-_13353810 0.11 ENSDART00000146136
ENSDART00000099602
ENSDART00000004539
ube2l3b
ubiquitin-conjugating enzyme E2L 3b
chr23_+_33947874 0.11 ENSDART00000136104
si:ch211-148l7.4
si:ch211-148l7.4
chr8_+_24299321 0.11 ENSDART00000112046
ENSDART00000183558
ENSDART00000183796
ENSDART00000181395
ENSDART00000184555
ENSDART00000172531
ENSDART00000191663
ENSDART00000184103
ENSDART00000183676
ZNF335
si:ch211-269m15.3
chr20_-_15161669 0.11 ENSDART00000080333
ENSDART00000063882
plpp6
phospholipid phosphatase 6
chr8_+_21254192 0.11 ENSDART00000167718
itpr3
inositol 1,4,5-trisphosphate receptor, type 3
chr22_-_24248420 0.11 ENSDART00000165433
rgs2
regulator of G protein signaling 2
chr17_-_6382392 0.11 ENSDART00000188051
ENSDART00000192560
ENSDART00000137389
ENSDART00000115389
txlnbb
taxilin beta b
chr7_+_25103965 0.11 ENSDART00000192561
ENSDART00000173721
si:dkey-23i12.9
si:dkey-23i12.9
chr3_-_54846444 0.11 ENSDART00000074010
ubald1b
UBA-like domain containing 1b
chr25_-_37227491 0.10 ENSDART00000156647
glg1a
golgi glycoprotein 1a
chr2_-_30912307 0.10 ENSDART00000188653
myl12.2
myosin, light chain 12, genome duplicate 2
chr16_+_42471455 0.10 ENSDART00000166640
si:ch211-215k15.5
si:ch211-215k15.5
chr13_-_49819027 0.10 ENSDART00000067824
b3galnt2
beta-1,3-N-acetylgalactosaminyltransferase 2
chr2_-_23349116 0.10 ENSDART00000099690
fam129ab
family with sequence similarity 129, member Ab
chr22_+_26600834 0.10 ENSDART00000157411
adcy9
adenylate cyclase 9
chr16_-_34212912 0.10 ENSDART00000145017
phactr4b
phosphatase and actin regulator 4b
chr11_-_24532988 0.10 ENSDART00000067078
plekhg5a
pleckstrin homology domain containing, family G (with RhoGef domain) member 5a
chr7_+_50766094 0.10 ENSDART00000165037
si:ch73-380l10.2
si:ch73-380l10.2
chr9_+_27354653 0.10 ENSDART00000134134
tlr20.2
toll-like receptor 20, tandem duplicate 2
chr24_+_39129316 0.09 ENSDART00000155346
tbc1d24
TBC1 domain family, member 24
chr23_+_44263986 0.09 ENSDART00000149194
dlg4b
discs, large homolog 4b (Drosophila)
chr1_-_49950643 0.09 ENSDART00000138301
sgms2
sphingomyelin synthase 2
chr16_-_54187374 0.09 ENSDART00000186989
ENSDART00000190113
LO017872.1

chr5_+_20148671 0.09 ENSDART00000143205
svopa
SV2 related protein a
chr22_-_18779232 0.09 ENSDART00000186726
atp5f1d
ATP synthase F1 subunit delta
chr21_+_4320769 0.08 ENSDART00000168553
HTRA2 (1 of many)
si:dkey-84o3.4
chr17_+_23470967 0.08 ENSDART00000104718
ENSDART00000154716
kif20ba
kinesin family member 20Ba
chr25_-_25646806 0.08 ENSDART00000089066
tbc1d2b
TBC1 domain family, member 2B
chr22_-_10774735 0.08 ENSDART00000081156
timm13
translocase of inner mitochondrial membrane 13 homolog (yeast)
chr2_-_12242695 0.08 ENSDART00000158175
gpr158b
G protein-coupled receptor 158b
chr11_+_44617021 0.08 ENSDART00000158887
rbm34
RNA binding motif protein 34
chr19_-_6631900 0.08 ENSDART00000144571
pvrl2l
poliovirus receptor-related 2 like
chr20_-_15161502 0.08 ENSDART00000187072
plpp6
phospholipid phosphatase 6
chr2_-_13691834 0.08 ENSDART00000186570
CABZ01044235.1

chr5_-_23583446 0.08 ENSDART00000027217
cwc15
CWC15 spliceosome-associated protein homolog (S. cerevisiae)
chr3_+_29179329 0.08 ENSDART00000085216
ENSDART00000190136
cacna1i
calcium channel, voltage-dependent, T type, alpha 1I subunit
chr9_+_27379193 0.08 ENSDART00000142656
tlr20.4
toll-like receptor 20, tandem duplicate 4
chr22_-_18778988 0.08 ENSDART00000019235
atp5f1d
ATP synthase F1 subunit delta
chr10_+_37182626 0.08 ENSDART00000137636
ksr1a
kinase suppressor of ras 1a
chr24_-_31092711 0.07 ENSDART00000168398
hccsb
holocytochrome c synthase b
chr9_+_33158191 0.07 ENSDART00000180786
dopey2
dopey family member 2
chr14_+_41409697 0.07 ENSDART00000173335
bcorl1
BCL6 corepressor-like 1
chr11_+_19060079 0.07 ENSDART00000158123
magi1b
membrane associated guanylate kinase, WW and PDZ domain containing 1b
chr14_+_989733 0.07 ENSDART00000161487
ENSDART00000127317
si:ch73-308l14.2
si:ch73-308l14.2
chr17_+_28706946 0.07 ENSDART00000126967
strn3
striatin, calmodulin binding protein 3
chr17_-_14671098 0.07 ENSDART00000037371
ppp1r13ba
protein phosphatase 1, regulatory subunit 13Ba
chr5_-_15321451 0.06 ENSDART00000139203
txnrd2.1
thioredoxin reductase 2, tandem duplicate 1
chr2_+_53357953 0.06 ENSDART00000187577
celf5b
cugbp, Elav-like family member 5b
chr22_-_5918670 0.06 ENSDART00000141373
si:rp71-36a1.1
si:rp71-36a1.1
chr22_-_2929127 0.06 ENSDART00000123730
ENSDART00000046678
pak2b
p21 protein (Cdc42/Rac)-activated kinase 2b
chr20_+_44498056 0.06 ENSDART00000023763
wdcp
WD repeat and coiled coil containing
chr14_-_28568107 0.06 ENSDART00000042850
ENSDART00000145502
insb
preproinsulin b
chr15_-_11341635 0.06 ENSDART00000055220
rab30
RAB30, member RAS oncogene family
chr10_+_7719796 0.06 ENSDART00000191795
ggcx
gamma-glutamyl carboxylase
chr2_-_57110477 0.06 ENSDART00000181132
slc25a42
solute carrier family 25, member 42
chr19_+_9790806 0.06 ENSDART00000155948
cacng6a
calcium channel, voltage-dependent, gamma subunit 6a
chr5_+_15495351 0.06 ENSDART00000111646
ENSDART00000114446
suds3
SDS3 homolog, SIN3A corepressor complex component
chr15_-_12500938 0.06 ENSDART00000159627
scn4ba
sodium channel, voltage-gated, type IV, beta a
chr17_+_31914877 0.06 ENSDART00000177801
FAM196A (1 of many)
family with sequence similarity 196 member A
chr19_-_1023051 0.06 ENSDART00000158429
tmem42b
transmembrane protein 42b
chr11_+_33312601 0.06 ENSDART00000188024
cntnap5l
contactin associated protein-like 5 like
chr17_+_32571584 0.06 ENSDART00000087565
eva1a
eva-1 homolog A (C. elegans)
chr19_+_41701660 0.06 ENSDART00000033362
gatad2b
GATA zinc finger domain containing 2B
chr11_+_6739433 0.06 ENSDART00000163397
pde4cb
phosphodiesterase 4C, cAMP-specific b
chr18_+_5308392 0.06 ENSDART00000179072
DUT
deoxyuridine triphosphatase
chr19_-_12967986 0.05 ENSDART00000151064
slc25a32a
solute carrier family 25 (mitochondrial folate carrier), member 32a
chr18_-_41164277 0.05 ENSDART00000187766
ENSDART00000185375
CABZ01005876.1

chr1_-_55196103 0.05 ENSDART00000140153
mri1
methylthioribose-1-phosphate isomerase 1
chr2_-_12243213 0.05 ENSDART00000113081
gpr158b
G protein-coupled receptor 158b
chr15_-_18223769 0.05 ENSDART00000139966
or131-1
odorant receptor, family H, subfamily 131, member 1
chr9_+_27876146 0.05 ENSDART00000133997
armc8
armadillo repeat containing 8
chr6_-_50730749 0.05 ENSDART00000157153
ENSDART00000110441
pigu
phosphatidylinositol glycan anchor biosynthesis, class U
chr17_+_44463230 0.05 ENSDART00000130311
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit
chr15_-_766015 0.05 ENSDART00000190648
si:dkey-7i4.15
si:dkey-7i4.15
chr6_+_3693441 0.05 ENSDART00000065256
ppig
peptidylprolyl isomerase G (cyclophilin G)
chr25_-_20258508 0.04 ENSDART00000133860
ENSDART00000006840
ENSDART00000173434
dnm1l
dynamin 1-like
chr5_+_54685175 0.04 ENSDART00000115016
pmchl
pro-melanin-concentrating hormone, like
chr24_+_19591893 0.04 ENSDART00000152026
slco5a1a
solute carrier organic anion transporter family member 5A1a
chr3_-_50127668 0.04 ENSDART00000062116
cldnk
claudin k
chr23_+_3611765 0.04 ENSDART00000181481
si:dkey-9l20.3
si:dkey-9l20.3
chr9_+_29985010 0.04 ENSDART00000020743
cmss1
cms1 ribosomal small subunit homolog (yeast)
chr23_-_24825863 0.04 ENSDART00000112493
syt6a
synaptotagmin VIa
chr22_+_696931 0.04 ENSDART00000149712
ENSDART00000009756
gpr37l1a
G protein-coupled receptor 37 like 1a
chr11_-_2222440 0.04 ENSDART00000162167
smug1
single-strand-selective monofunctional uracil-DNA glycosylase 1
chr21_-_23046606 0.04 ENSDART00000016167
zw10
zw10 kinetochore protein
chr22_+_15747337 0.04 ENSDART00000062582
si:dkeyp-70f9.7
si:dkeyp-70f9.7
chr18_+_33818577 0.04 ENSDART00000131788
olfcq19
olfactory receptor C family, q19
chr19_+_48117995 0.04 ENSDART00000170865
nme2b.1
NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 1
chr11_+_27134116 0.04 ENSDART00000129736
hdac11
histone deacetylase 11
chr15_+_47161917 0.03 ENSDART00000167860
gap43
growth associated protein 43
chr18_+_28102620 0.03 ENSDART00000132342
kiaa1549lb
KIAA1549-like b
chr6_+_53361874 0.03 ENSDART00000180660
si:ch211-161c3.5
si:ch211-161c3.5
chr7_-_11605185 0.03 ENSDART00000169291
ENSDART00000113904
stard5
StAR-related lipid transfer (START) domain containing 5
chr9_-_27442339 0.03 ENSDART00000138602
stxbp5l
syntaxin binding protein 5-like
chr21_+_21791343 0.03 ENSDART00000151654
neu3.1
sialidase 3 (membrane sialidase), tandem duplicate 1
chr16_-_39900665 0.03 ENSDART00000136719
rbms3
RNA binding motif, single stranded interacting protein

Network of associatons between targets according to the STRING database.

First level regulatory network of znf143b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:1901503 ether lipid biosynthetic process(GO:0008611) glycerol ether biosynthetic process(GO:0046504) cellular lipid biosynthetic process(GO:0097384) ether biosynthetic process(GO:1901503)
0.2 0.5 GO:0042998 positive regulation of Golgi to plasma membrane protein transport(GO:0042998) positive regulation of establishment of protein localization to plasma membrane(GO:0090004)
0.1 0.8 GO:0032287 peripheral nervous system myelin maintenance(GO:0032287)
0.1 0.5 GO:0006004 fucose metabolic process(GO:0006004)
0.1 0.2 GO:0097113 AMPA glutamate receptor clustering(GO:0097113) glutamate receptor clustering(GO:0097688)
0.1 0.3 GO:0070987 error-free translesion synthesis(GO:0070987)
0.1 0.2 GO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043518)
0.1 0.2 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1 0.2 GO:0006272 leading strand elongation(GO:0006272)
0.1 0.3 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.0 0.3 GO:0072321 chaperone-mediated protein transport(GO:0072321)
0.0 0.1 GO:0046168 NADH oxidation(GO:0006116) glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.1 GO:0002155 regulation of thyroid hormone mediated signaling pathway(GO:0002155)
0.0 0.1 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.2 GO:0006390 transcription from mitochondrial promoter(GO:0006390)
0.0 0.2 GO:0017062 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.0 0.1 GO:0090299 regulation of neural crest formation(GO:0090299)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.3 GO:0072378 blood coagulation, fibrin clot formation(GO:0072378)
0.0 0.3 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.2 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.1 GO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation(GO:0060394)
0.0 0.4 GO:0008535 respiratory chain complex IV assembly(GO:0008535)
0.0 0.1 GO:0019284 L-methionine biosynthetic process from S-adenosylmethionine(GO:0019284)
0.0 0.2 GO:0060036 notochord cell vacuolation(GO:0060036)
0.0 0.1 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0030816 activation of adenylate cyclase activity(GO:0007190) positive regulation of cAMP metabolic process(GO:0030816) positive regulation of cAMP biosynthetic process(GO:0030819) positive regulation of adenylate cyclase activity(GO:0045762)
0.0 0.3 GO:0097178 ruffle assembly(GO:0097178)
0.0 0.1 GO:0017003 protein-heme linkage(GO:0017003) protein-tetrapyrrole linkage(GO:0017006) cytochrome c-heme linkage(GO:0018063)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.2 GO:0048096 chromatin-mediated maintenance of transcription(GO:0048096)
0.0 0.1 GO:1902514 calcium ion transmembrane transport via high voltage-gated calcium channel(GO:0061577) regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1902514)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.1 GO:0017187 peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0032545 CURI complex(GO:0032545) UTP-C complex(GO:0034456)
0.1 0.2 GO:0031213 RSF complex(GO:0031213)
0.0 0.2 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.2 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.1 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.3 GO:0042645 nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.0 0.3 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.1 GO:0042719 mitochondrial intermembrane space protein transporter complex(GO:0042719)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.2 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.4 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.7 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.2 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.1 GO:0031931 TORC1 complex(GO:0031931)
0.0 0.0 GO:0031417 NatC complex(GO:0031417)
0.0 0.2 GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.0 0.2 GO:0000314 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0071253 connexin binding(GO:0071253)
0.1 0.3 GO:0015369 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.1 0.2 GO:0008179 adenylate cyclase binding(GO:0008179)
0.1 0.2 GO:1901612 cardiolipin binding(GO:1901612)
0.0 0.2 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.4 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.1 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.5 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.3 GO:0015386 monovalent cation:proton antiporter activity(GO:0005451) sodium:proton antiporter activity(GO:0015385) potassium:proton antiporter activity(GO:0015386)
0.0 0.5 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0004865 protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0 0.1 GO:0015228 coenzyme A transmembrane transporter activity(GO:0015228) adenosine 3',5'-bisphosphate transmembrane transporter activity(GO:0071077) AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0008517 folic acid transporter activity(GO:0008517) FAD transmembrane transporter activity(GO:0015230)
0.0 0.5 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.3 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0 0.1 GO:0008488 gamma-glutamyl carboxylase activity(GO:0008488)
0.0 0.1 GO:0004408 holocytochrome-c synthase activity(GO:0004408)
0.0 0.0 GO:0000703 oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity(GO:0000703)
0.0 0.1 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 0.2 GO:0016929 SUMO-specific protease activity(GO:0016929)
0.0 0.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME RNA POL III CHAIN ELONGATION Genes involved in RNA Polymerase III Chain Elongation
0.0 0.6 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.2 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.1 REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS Genes involved in Elevation of cytosolic Ca2+ levels
0.0 0.1 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling