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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for znf148

Z-value: 0.29

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Transcription factors associated with znf148

Gene Symbol Gene ID Gene Info
znf148
ENSDARG00000055106 zinc finger protein 148

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
znf148dr11_v1_chr9_+_38629962_386299620.881.5e-06Click!

Activity profile of znf148 motif

Sorted Z-values of znf148 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr19_+_233143 2.23 ENSDART00000175273
syngap1a
synaptic Ras GTPase activating protein 1a
chr22_-_36934040 1.32 ENSDART00000151666
pimr206
Pim proto-oncogene, serine/threonine kinase, related 206
chr5_-_26118855 0.75 ENSDART00000009028
ela3l
elastase 3 like
chr17_-_52521002 0.67 ENSDART00000114931
prox2
prospero homeobox 2
chr25_-_16554757 0.63 ENSDART00000154480
si:ch211-266k8.6
si:ch211-266k8.6
chr2_+_6181383 0.57 ENSDART00000153307
si:ch73-344o19.1
si:ch73-344o19.1
chr3_-_61592417 0.55 ENSDART00000155082
nptx2a
neuronal pentraxin 2a
chr11_-_18705303 0.54 ENSDART00000059732
id1
inhibitor of DNA binding 1
chr6_+_12865137 0.51 ENSDART00000090065
fam117ba
family with sequence similarity 117, member Ba
chr17_+_6667441 0.50 ENSDART00000123503
ENSDART00000180381
ENSDART00000156140
smc6
structural maintenance of chromosomes 6
chr2_-_24907741 0.48 ENSDART00000155013
si:dkey-149i17.11
si:dkey-149i17.11
chr4_-_11751037 0.48 ENSDART00000102301
podxl
podocalyxin-like
chr7_+_568819 0.44 ENSDART00000173716
nrxn2b
neurexin 2b
chr16_+_40560622 0.39 ENSDART00000038294
tp53inp1
tumor protein p53 inducible nuclear protein 1
chr13_-_36535128 0.37 ENSDART00000043312
srsf5a
serine/arginine-rich splicing factor 5a
chr14_-_2933185 0.37 ENSDART00000161677
ENSDART00000162446
ENSDART00000109378
si:dkey-201i24.6
si:dkey-201i24.6
chr1_-_411331 0.36 ENSDART00000092524
rasa3
RAS p21 protein activator 3
chr6_-_8736766 0.33 ENSDART00000143956
cavin2b
caveolae associated protein 2b
chr6_+_50451337 0.31 ENSDART00000155051
mych
myelocytomatosis oncogene homolog
chr16_+_11029762 0.31 ENSDART00000091183
erfl3
Ets2 repressor factor like 3
chr20_+_17739923 0.30 ENSDART00000024627
cdh2
cadherin 2, type 1, N-cadherin (neuronal)
chr24_+_42132962 0.29 ENSDART00000187739
wwp1
WW domain containing E3 ubiquitin protein ligase 1
chr5_+_483965 0.28 ENSDART00000150007
tek
TEK tyrosine kinase, endothelial
chr4_-_8093753 0.28 ENSDART00000133434
wnk1b
WNK lysine deficient protein kinase 1b
chr4_+_11464255 0.28 ENSDART00000008584
gdi2
GDP dissociation inhibitor 2
chr20_+_305035 0.28 ENSDART00000104807
si:dkey-119m7.4
si:dkey-119m7.4
chr3_-_37758487 0.26 ENSDART00000150938
si:dkey-260c8.6
si:dkey-260c8.6
chr25_+_13791627 0.24 ENSDART00000159278
zgc:92873
zgc:92873
chr13_+_12045758 0.22 ENSDART00000079398
ENSDART00000165467
ENSDART00000165880
gng2
guanine nucleotide binding protein (G protein), gamma 2
chr3_-_31804481 0.20 ENSDART00000028270
gfap
glial fibrillary acidic protein
chr22_-_607812 0.19 ENSDART00000145983
cdkn1a
cyclin-dependent kinase inhibitor 1A
chr3_-_1938588 0.18 ENSDART00000013001
ENSDART00000186405
zgc:152753
zgc:152753
chr10_+_38512270 0.18 ENSDART00000109752
serpinh1a
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a
chr24_-_40668208 0.17 ENSDART00000171543
smyhc1
slow myosin heavy chain 1
chr2_-_6182098 0.17 ENSDART00000156167
si:ch73-182a11.2
si:ch73-182a11.2
chr3_-_2591942 0.16 ENSDART00000127971
si:dkey-217f16.5
si:dkey-217f16.5
chr14_-_41556720 0.15 ENSDART00000149244
itga6l
integrin, alpha 6, like
chr13_+_12045475 0.15 ENSDART00000163053
ENSDART00000160812
ENSDART00000158244
gng2
guanine nucleotide binding protein (G protein), gamma 2
chr17_+_45454943 0.14 ENSDART00000074838
kcnk3b
potassium channel, subfamily K, member 3b
chr22_-_11438627 0.14 ENSDART00000007649
mid1ip1b
MID1 interacting protein 1b
chr15_-_2734560 0.14 ENSDART00000153853
ppp5c
protein phosphatase 5, catalytic subunit
chr12_-_41618844 0.14 ENSDART00000160054
dpysl4
dihydropyrimidinase-like 4
chr9_+_56449505 0.13 ENSDART00000187725
CABZ01079480.1

chr24_-_40667800 0.13 ENSDART00000169315
smyhc1
slow myosin heavy chain 1
chr10_+_1638876 0.12 ENSDART00000184484
ENSDART00000060946
ENSDART00000181251
sgsm1b
small G protein signaling modulator 1b
chr18_+_33725576 0.11 ENSDART00000146816
si:dkey-145c18.5
si:dkey-145c18.5
chr1_+_52690448 0.11 ENSDART00000150326
osbp
oxysterol binding protein
chr20_+_50052627 0.11 ENSDART00000188799
cpsf2
cleavage and polyadenylation specific factor 2
chr14_+_18781082 0.10 ENSDART00000108793
si:ch211-111e20.1
si:ch211-111e20.1
chr23_+_44374041 0.10 ENSDART00000136056
ephb4b
eph receptor B4b
chr8_-_14209852 0.10 ENSDART00000005359
def6a
differentially expressed in FDCP 6a homolog (mouse)
chr14_-_26177156 0.10 ENSDART00000014149
fat2
FAT atypical cadherin 2
chr24_-_3419998 0.10 ENSDART00000066839
slc35g2b
solute carrier family 35, member G2b
chr11_+_2434262 0.10 ENSDART00000166445
csnk2a4
casein kinase 2, alpha 4 polypeptide
chr8_+_9866351 0.09 ENSDART00000133985
kcnd1
potassium voltage-gated channel, Shal-related subfamily, member 1
chr14_+_15543331 0.09 ENSDART00000167025
si:dkey-203a12.7
si:dkey-203a12.7
chr9_+_30274637 0.09 ENSDART00000079095
rpgra
retinitis pigmentosa GTPase regulator a
chr6_+_4084739 0.09 ENSDART00000087661
sema5bb
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Bb
chr18_+_2228737 0.09 ENSDART00000165301
rab27a
RAB27A, member RAS oncogene family
chr23_+_28648864 0.09 ENSDART00000189096
l1cama
L1 cell adhesion molecule, paralog a
chr10_+_187760 0.08 ENSDART00000161007
ENSDART00000160651
ets2
v-ets avian erythroblastosis virus E26 oncogene homolog 2
chr13_-_42579437 0.08 ENSDART00000135172
fam83ha
family with sequence similarity 83, member Ha
chr5_+_4564233 0.08 ENSDART00000193435
CABZ01058647.1

chr14_+_7939398 0.08 ENSDART00000189773
cxxc5b
CXXC finger protein 5b
chr10_-_15053507 0.08 ENSDART00000157446
ENSDART00000170441
CLDN23
si:ch211-95j8.5
chr6_+_28877306 0.08 ENSDART00000065137
ENSDART00000123189
ENSDART00000065135
ENSDART00000181512
ENSDART00000130799
tp63
tumor protein p63
chr24_-_21490628 0.07 ENSDART00000181546
atp8a2
ATPase phospholipid transporting 8A2
chr25_-_28587896 0.07 ENSDART00000111908
si:dkeyp-67e1.6
si:dkeyp-67e1.6
chr11_+_44579865 0.07 ENSDART00000173425
nid1b
nidogen 1b
chr17_-_36818176 0.06 ENSDART00000061762
myo6b
myosin VIb
chr7_-_6279138 0.06 ENSDART00000173299
si:ch211-220f21.2
si:ch211-220f21.2
chr8_-_1956632 0.06 ENSDART00000131602
si:dkey-178e17.1
si:dkey-178e17.1
chr10_+_22724059 0.06 ENSDART00000136123
kdm6bb
lysine (K)-specific demethylase 6B, b
chr6_-_9581949 0.06 ENSDART00000144335
cyp27c1
cytochrome P450, family 27, subfamily C, polypeptide 1
chr5_+_41793001 0.06 ENSDART00000136439
ENSDART00000190477
ENSDART00000192289
bcl7a
BCL tumor suppressor 7A
chr13_-_35459928 0.06 ENSDART00000144109
slx4ip
SLX4 interacting protein
chr14_+_7939216 0.05 ENSDART00000171657
cxxc5b
CXXC finger protein 5b
chr6_-_141564 0.05 ENSDART00000151245
ENSDART00000063876
s1pr5b
sphingosine-1-phosphate receptor 5b
chr6_-_52156427 0.05 ENSDART00000082821
rims4
regulating synaptic membrane exocytosis 4
chr15_-_29388012 0.05 ENSDART00000115032
serpinh1b
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b
chr18_-_14337065 0.05 ENSDART00000135703
hsbp1b
heat shock factor binding protein 1b
chr1_-_28885919 0.04 ENSDART00000152182
poglut1
protein O-glucosyltransferase 1
chr21_-_41838284 0.04 ENSDART00000141067
cct6a
chaperonin containing TCP1, subunit 6A (zeta 1)
chr6_+_36459897 0.04 ENSDART00000104248
ENSDART00000145753
lrrc15
leucine rich repeat containing 15
chr20_+_7180298 0.04 ENSDART00000143026
si:dkeyp-51f12.2
si:dkeyp-51f12.2
chr4_+_37406676 0.04 ENSDART00000130981
si:ch73-134f24.1
si:ch73-134f24.1
chr11_+_6116503 0.03 ENSDART00000176170
nr2f6b
nuclear receptor subfamily 2, group F, member 6b
chr10_+_31951338 0.03 ENSDART00000019416
lhfpl6
LHFPL tetraspan subfamily member 6
chr21_-_43474012 0.03 ENSDART00000065104
tmem185
transmembrane protein 185
chr16_+_37876779 0.02 ENSDART00000140148
si:ch211-198c19.1
si:ch211-198c19.1
chr7_-_1101071 0.02 ENSDART00000176053
dctn1a
dynactin 1a
chr4_-_6459863 0.02 ENSDART00000138367
foxp2
forkhead box P2
chr14_-_41556533 0.01 ENSDART00000074401
itga6l
integrin, alpha 6, like
chr13_-_40302710 0.01 ENSDART00000144360
pyroxd2
pyridine nucleotide-disulphide oxidoreductase domain 2
chr16_+_5678071 0.01 ENSDART00000011166
ENSDART00000134198
ENSDART00000131575
zgc:158689
zgc:158689
chr9_-_6927587 0.01 ENSDART00000059092
tmem182a
transmembrane protein 182a
chr13_+_23214100 0.01 ENSDART00000163393
sorbs1
sorbin and SH3 domain containing 1
chr5_+_1933131 0.01 ENSDART00000061693
si:ch73-55i23.1
si:ch73-55i23.1
chr7_-_1918971 0.00 ENSDART00000181759
CABZ01040626.1

Network of associatons between targets according to the STRING database.

First level regulatory network of znf148

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0033631 cell-cell adhesion mediated by integrin(GO:0033631) regulation of cell-cell adhesion mediated by integrin(GO:0033632)
0.1 0.3 GO:0090247 hindbrain structural organization(GO:0021577) dorsal fin morphogenesis(GO:0035142) cell motility involved in somitogenic axis elongation(GO:0090247) cell migration involved in somitogenic axis elongation(GO:0090248)
0.0 0.3 GO:0031444 slow-twitch skeletal muscle fiber contraction(GO:0031444)
0.0 0.4 GO:0043363 nucleate erythrocyte differentiation(GO:0043363)
0.0 0.3 GO:1903288 positive regulation of sodium ion transport(GO:0010765) positive regulation of sodium ion transmembrane transport(GO:1902307) regulation of potassium ion import(GO:1903286) positive regulation of potassium ion import(GO:1903288) positive regulation of sodium ion transmembrane transporter activity(GO:2000651)
0.0 0.3 GO:0051897 positive regulation of protein kinase B signaling(GO:0051897)
0.0 0.1 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.1 GO:0006843 mitochondrial citrate transport(GO:0006843)
0.0 0.5 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.2 GO:0035914 skeletal muscle cell differentiation(GO:0035914)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.5 GO:0031528 microvillus membrane(GO:0031528)
0.0 0.3 GO:0014704 intercalated disc(GO:0014704)
0.0 0.4 GO:0031680 G-protein beta/gamma-subunit complex(GO:0031680)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.1 GO:0005252 open rectifier potassium channel activity(GO:0005252)
0.0 0.3 GO:0001217 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217)
0.0 0.5 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861)
0.0 0.1 GO:0019215 intermediate filament binding(GO:0019215)
0.0 0.3 GO:0005080 protein kinase C binding(GO:0005080)
0.0 0.3 GO:0019869 chloride channel inhibitor activity(GO:0019869) potassium channel inhibitor activity(GO:0019870)
0.0 0.1 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.3 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 0.1 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.0 0.5 PID ALK1 PATHWAY ALK1 signaling events
0.0 0.2 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.3 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR Genes involved in Thromboxane signalling through TP receptor
0.0 0.3 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.2 REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL Genes involved in AKT phosphorylates targets in the cytosol
0.0 0.3 REACTOME TIE2 SIGNALING Genes involved in Tie2 Signaling