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12D miR HR13_24

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Results for Hoxb5

Z-value: 0.44

Motif logo

Transcription factors associated with Hoxb5

Gene Symbol Gene ID Gene Info
ENSMUSG00000038700.3 homeobox B5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Hoxb5mm10_v2_chr11_+_96302595_963025950.471.5e-01Click!

Activity profile of Hoxb5 motif

Sorted Z-values of Hoxb5 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr16_-_44333135 1.69 ENSMUST00000047446.6
SID1 transmembrane family, member 1
chr16_-_44332925 1.37 ENSMUST00000136381.1
SID1 transmembrane family, member 1
chr10_-_81014902 0.62 ENSMUST00000126317.1
ENSMUST00000092285.3
ENSMUST00000117805.1
guanine nucleotide binding protein (G protein), gamma 7
chr6_-_113501818 0.60 ENSMUST00000101059.1
proline-rich transmembrane protein 3
chr1_+_172481788 0.49 ENSMUST00000127052.1
immunoglobulin superfamily, member 9
chr1_+_164249233 0.49 ENSMUST00000169394.1
solute carrier family 19 (thiamine transporter), member 2
chr7_+_19965365 0.47 ENSMUST00000094753.4
carcinoembryonic antigen-related cell adhesion molecule 20
chr9_-_35116804 0.44 ENSMUST00000034537.6
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
chr4_-_131821516 0.42 ENSMUST00000097860.2
protein tyrosine phosphatase, receptor type, U
chr17_-_57087729 0.42 ENSMUST00000071135.5
tubulin, beta 4A class IVA
chr5_+_112449405 0.41 ENSMUST00000100882.2
predicted gene 6588
chr6_+_141249161 0.40 ENSMUST00000043259.7
phosphodiesterase 3A, cGMP inhibited
chr4_+_123233556 0.39 ENSMUST00000040821.4
hairy/enhancer-of-split related with YRPW motif-like
chr7_+_16875302 0.37 ENSMUST00000108493.1
dapper homolog 3, antagonist of beta-catenin (xenopus)
chr8_+_13339656 0.36 ENSMUST00000170909.1
transcription factor Dp 1
chr2_+_125247190 0.33 ENSMUST00000082122.7
deoxyuridine triphosphatase
chr2_+_152962485 0.30 ENSMUST00000099197.2
ENSMUST00000103155.3
tubulin tyrosine ligase-like family, member 9
chr7_-_45466894 0.29 ENSMUST00000033093.8
BCL2-associated X protein
chrX_+_151046131 0.28 ENSMUST00000112685.1
FYVE, RhoGEF and PH domain containing 1
chr7_+_102702331 0.28 ENSMUST00000094124.3
olfactory receptor 558
chr16_+_17070220 0.28 ENSMUST00000141959.1
yippee-like 1 (Drosophila)
chr7_+_3390629 0.27 ENSMUST00000182222.1
calcium channel, voltage-dependent, gamma subunit 8
chr8_+_70594466 0.27 ENSMUST00000019283.9
myo-inositol 1-phosphate synthase A1
chrX_-_134111852 0.26 ENSMUST00000033610.6
NADPH oxidase 1
chr16_+_17070281 0.26 ENSMUST00000090199.3
yippee-like 1 (Drosophila)
chr11_+_4873951 0.24 ENSMUST00000038570.2
4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
chr2_+_85136355 0.23 ENSMUST00000057019.7
apelin receptor
chr16_+_17070127 0.23 ENSMUST00000115729.1
yippee-like 1 (Drosophila)
chr7_-_31150981 0.22 ENSMUST00000085636.6
ENSMUST00000001280.7
GRAM domain containing 1A
chr18_-_61707583 0.21 ENSMUST00000025472.1
prenylcysteine oxidase 1 like
chr9_+_78051938 0.20 ENSMUST00000024104.7
glial cells missing homolog 1 (Drosophila)
chr15_-_95655960 0.20 ENSMUST00000054244.6
developing brain homeobox 2
chr4_-_108848619 0.19 ENSMUST00000164855.1
RIKEN cDNA A730015C16 gene
chr1_+_74544345 0.19 ENSMUST00000027362.7
phospholipase C, delta 4
chr3_+_89215170 0.18 ENSMUST00000029682.4
thrombospondin 3
chr8_+_95081187 0.17 ENSMUST00000034239.7
katanin p80 (WD40-containing) subunit B 1
chrX_-_72656135 0.14 ENSMUST00000055966.6
gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
chr10_-_88683021 0.14 ENSMUST00000004473.8
Spi-C transcription factor (Spi-1/PU.1 related)
chr7_+_25627604 0.14 ENSMUST00000076034.6
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
chr13_+_93304066 0.14 ENSMUST00000109493.1
homer homolog 1 (Drosophila)
chr17_+_47630690 0.13 ENSMUST00000024779.8
ubiquitin specific peptidase 49
chr7_+_45017953 0.13 ENSMUST00000044111.7
Harvey rat sarcoma oncogene, subgroup R
chr4_+_14864076 0.11 ENSMUST00000029875.3
transmembrane protein 55A
chr2_-_5862923 0.11 ENSMUST00000071016.2
predicted gene 13199
chr3_-_89160155 0.11 ENSMUST00000029686.3
hyperpolarization-activated, cyclic nucleotide-gated K+ 3
chr2_-_130629994 0.10 ENSMUST00000110262.1
ENSMUST00000028761.4
FAST kinase domains 5
U box domain containing 5
chr13_+_23695791 0.10 ENSMUST00000041052.2
histone cluster 1, H1t
chr6_+_124512615 0.10 ENSMUST00000068593.7
complement component 1, r subcomponent A
chr4_+_86053887 0.09 ENSMUST00000107178.2
ENSMUST00000048885.5
ENSMUST00000141889.1
ENSMUST00000120678.1
ADAMTS-like 1
chr15_+_12205009 0.09 ENSMUST00000038172.8
myotubularin related protein 12
chr3_+_96525163 0.08 ENSMUST00000049208.9
hemochromatosis type 2 (juvenile) (human homolog)
chr7_+_119896292 0.08 ENSMUST00000106517.1
LYR motif containing 1
chrX_-_60893430 0.08 ENSMUST00000135107.2
SRY-box containing gene 3
chr6_-_128362812 0.08 ENSMUST00000112152.1
ENSMUST00000057421.8
ENSMUST00000112151.1
RAD9-HUS1-RAD1 interacting nuclear orphan 1
chr7_-_123500449 0.07 ENSMUST00000042470.7
ENSMUST00000128217.1
zinc finger with KRAB and SCAN domains 2
chr2_-_153225396 0.07 ENSMUST00000099194.2
TSPY-like 3
chr14_-_63543931 0.07 ENSMUST00000058679.5
myotubularin related protein 9
chr2_+_116067933 0.06 ENSMUST00000156095.1
RIKEN cDNA G630016G05 gene
chr5_+_143933059 0.06 ENSMUST00000166847.1
radial spoke head 10 homolog B (Chlamydomonas)
chr17_-_47691403 0.06 ENSMUST00000152214.1
ENSMUST00000113299.1
prickle homolog 4 (Drosophila)
predicted gene 21981
chr7_-_109083284 0.06 ENSMUST00000120876.1
ENSMUST00000055993.6
resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
chrX_+_7723278 0.06 ENSMUST00000144148.1
WD repeat domain 45
chr19_-_45816007 0.05 ENSMUST00000079431.3
ENSMUST00000026247.6
ENSMUST00000162528.2
Kv channel-interacting protein 2
chr8_+_123332676 0.05 ENSMUST00000010298.6
spire homolog 2 (Drosophila)
chr7_+_127296251 0.05 ENSMUST00000117762.1
integrin alpha L
chr7_+_127296291 0.05 ENSMUST00000106306.2
ENSMUST00000120857.1
integrin alpha L
chr8_-_25597459 0.05 ENSMUST00000079160.6
leucine zipper-EF-hand containing transmembrane protein 2
chr7_+_143005046 0.04 ENSMUST00000009396.6
tetraspanin 32
chr7_+_119895836 0.04 ENSMUST00000106518.1
ENSMUST00000054440.3
LYR motif containing 1
chr6_+_145121727 0.03 ENSMUST00000032396.6
lymphoid-restricted membrane protein
chr7_-_18354944 0.03 ENSMUST00000098783.4
ENSMUST00000003597.8
pregnancy specific glycoprotein 18
chr2_-_164743182 0.03 ENSMUST00000103096.3
WAP four-disulfide core domain 3
chr8_-_24596960 0.02 ENSMUST00000033956.6
indoleamine 2,3-dioxygenase 1
chr9_+_8900459 0.02 ENSMUST00000098986.3
ENSMUST00000070463.3
progesterone receptor
chr9_+_8971791 0.02 ENSMUST00000104915.2
predicted gene 16485
chr7_+_143005677 0.02 ENSMUST00000082008.5
ENSMUST00000105925.1
ENSMUST00000105924.1
tetraspanin 32
chr7_-_28547109 0.02 ENSMUST00000057974.3
non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr17_+_94873986 0.02 ENSMUST00000108007.4
predicted gene, 20939
chr12_+_17924294 0.02 ENSMUST00000169657.1
RIKEN cDNA B430203G13 gene
chr10_+_80300997 0.02 ENSMUST00000140828.1
ENSMUST00000138909.1
adenomatosis polyposis coli 2
chr11_-_74723829 0.01 ENSMUST00000102520.2
platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
chr1_-_193370260 0.01 ENSMUST00000016323.4
calcium/calmodulin-dependent protein kinase I gamma
chr2_-_116065798 0.01 ENSMUST00000110907.1
ENSMUST00000110908.2
Meis homeobox 2
chr17_+_34240015 0.01 ENSMUST00000173764.1
histocompatibility 2, O region beta locus
chr4_-_141874879 0.01 ENSMUST00000036854.3
EF hand domain containing 2
chr14_-_41004517 0.01 ENSMUST00000153830.1
family with sequence similarity 213, member A
chr17_+_47385386 0.01 ENSMUST00000024774.7
ENSMUST00000145462.1
guanylate cyclase activator 1B
chrM_+_11734 0.01 ENSMUST00000082418.1
mitochondrially encoded NADH dehydrogenase 5
chr1_-_193370225 0.01 ENSMUST00000169907.1
calcium/calmodulin-dependent protein kinase I gamma
chr17_+_35076902 0.01 ENSMUST00000172494.1
ENSMUST00000172678.1
ENSMUST00000013910.4
lymphocyte antigen 6 complex, locus G6E
chr7_+_143005638 0.01 ENSMUST00000075172.5
ENSMUST00000105923.1
tetraspanin 32
chrX_-_134111708 0.01 ENSMUST00000159259.1
ENSMUST00000113275.3
NADPH oxidase 1
chr1_-_162937225 0.01 ENSMUST00000178465.1
flavin containing monooxygenase 6
chr7_+_127296369 0.00 ENSMUST00000170971.1
integrin alpha L

Network of associatons between targets according to the STRING database.

First level regulatory network of Hoxb5

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.1 GO:0033227 dsRNA transport(GO:0033227)
0.1 0.3 GO:0006226 dUMP biosynthetic process(GO:0006226)
0.1 0.4 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.1 0.5 GO:0015888 thiamine transport(GO:0015888)
0.1 0.3 GO:0002352 B cell negative selection(GO:0002352) regulation of mitochondrial membrane permeability involved in programmed necrotic cell death(GO:1902445)
0.1 0.4 GO:0072014 proximal tubule development(GO:0072014)
0.1 0.2 GO:0030327 prenylated protein catabolic process(GO:0030327)
0.1 0.3 GO:0045726 positive regulation of integrin biosynthetic process(GO:0045726)
0.1 0.6 GO:0007168 receptor guanylyl cyclase signaling pathway(GO:0007168)
0.1 0.2 GO:0002030 inhibitory G-protein coupled receptor phosphorylation(GO:0002030)
0.0 0.2 GO:0060800 regulation of cell differentiation involved in embryonic placenta development(GO:0060800)
0.0 0.4 GO:0070345 negative regulation of fat cell proliferation(GO:0070345)
0.0 0.2 GO:0031117 positive regulation of microtubule depolymerization(GO:0031117)
0.0 0.1 GO:0030311 poly-N-acetyllactosamine metabolic process(GO:0030309) poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.0 0.1 GO:0035616 histone H2B conserved C-terminal lysine deubiquitination(GO:0035616)
0.0 0.3 GO:0006020 inositol metabolic process(GO:0006020)
0.0 0.4 GO:0035414 negative regulation of catenin import into nucleus(GO:0035414)
0.0 0.0 GO:0070649 formin-nucleated actin cable assembly(GO:0070649)
0.0 0.2 GO:0060346 bone trabecula formation(GO:0060346)
0.0 0.3 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.0 0.1 GO:0002291 T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291)
0.0 0.0 GO:0060748 tertiary branching involved in mammary gland duct morphogenesis(GO:0060748)
0.0 0.1 GO:0000963 mitochondrial RNA processing(GO:0000963)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0033269 internode region of axon(GO:0033269)
0.0 0.3 GO:0071438 invadopodium membrane(GO:0071438)
0.0 0.1 GO:0044316 cone cell pedicle(GO:0044316)
0.0 0.3 GO:0097136 Bcl-2 family protein complex(GO:0097136)
0.0 0.1 GO:0034687 integrin alphaL-beta2 complex(GO:0034687)
0.0 0.1 GO:0070442 integrin alphaIIb-beta3 complex(GO:0070442)
0.0 0.5 GO:0031528 microvillus membrane(GO:0031528)
0.0 0.5 GO:0060077 inhibitory synapse(GO:0060077)
0.0 0.6 GO:0005834 heterotrimeric G-protein complex(GO:0005834)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.1 GO:0051033 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.1 0.4 GO:0035939 microsatellite binding(GO:0035939)
0.1 0.5 GO:0015403 thiamine uptake transmembrane transporter activity(GO:0015403)
0.1 0.4 GO:0047288 beta-galactoside (CMP) alpha-2,3-sialyltransferase activity(GO:0003836) monosialoganglioside sialyltransferase activity(GO:0047288)
0.1 0.3 GO:0030171 voltage-gated proton channel activity(GO:0030171)
0.0 0.1 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.0 0.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.4 GO:0070097 delta-catenin binding(GO:0070097)
0.0 0.3 GO:0051434 BH3 domain binding(GO:0051434)
0.0 0.2 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.1 GO:0030369 ICAM-3 receptor activity(GO:0030369)
0.0 0.2 GO:0008568 microtubule-severing ATPase activity(GO:0008568)
0.0 0.1 GO:0034597 phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity(GO:0034597)
0.0 0.1 GO:0005222 intracellular cAMP activated cation channel activity(GO:0005222)
0.0 0.5 GO:0098632 protein binding involved in cell-cell adhesion(GO:0098632)
0.0 0.1 GO:0031802 type 5 metabotropic glutamate receptor binding(GO:0031802)
0.0 0.4 GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.0 0.3 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0 0.4 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.6 REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA Genes involved in G beta:gamma signalling through PLC beta
0.0 0.3 REACTOME PYRIMIDINE METABOLISM Genes involved in Pyrimidine metabolism