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12D miR HR13_24

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Results for GGCAAGA

Z-value: 0.15

Motif logo

miRNA associated with seed GGCAAGA

NamemiRBASE accession
MIMAT0000538

Activity profile of GGCAAGA motif

Sorted Z-values of GGCAAGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr9_+_103112072 0.06 ENSMUST00000035155.6
RAB6B, member RAS oncogene family
chr19_+_4510472 0.05 ENSMUST00000068004.6
pyruvate carboxylase
chr7_+_25306085 0.04 ENSMUST00000119703.1
ENSMUST00000108409.1
transmembrane protein 145
chr15_-_43869993 0.03 ENSMUST00000067469.4
transmembrane protein 74
chr10_+_69212634 0.03 ENSMUST00000020101.5
Rho-related BTB domain containing 1
chr4_+_120854786 0.03 ENSMUST00000071093.2
regulating synaptic membrane exocytosis 3
chr7_+_25077205 0.02 ENSMUST00000179556.1
ENSMUST00000053410.9
zinc finger protein 574
chr6_-_118197732 0.02 ENSMUST00000032201.5
ENSMUST00000088790.3
ret proto-oncogene
chr1_-_166002591 0.02 ENSMUST00000111429.4
ENSMUST00000176800.1
POU domain, class 2, transcription factor 1
chr4_+_8691303 0.02 ENSMUST00000051558.3
chromodomain helicase DNA binding protein 7
chr8_+_82863351 0.02 ENSMUST00000078525.5
ring finger protein 150
chr2_+_102658640 0.02 ENSMUST00000080210.3
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr13_+_37826225 0.02 ENSMUST00000128570.1
ras responsive element binding protein 1
chr16_+_24393350 0.02 ENSMUST00000038053.6
LIM domain containing preferred translocation partner in lipoma
chr4_-_126429501 0.02 ENSMUST00000069097.6
argonaute RISC catalytic subunit 3
chr19_-_58794436 0.02 ENSMUST00000028299.4
RIKEN cDNA 1700019N19 gene
chr7_-_15999495 0.02 ENSMUST00000094821.3
glioma tumor suppressor candidate region gene 1
chr15_+_30172570 0.02 ENSMUST00000081728.5
catenin (cadherin associated protein), delta 2
chr6_+_91684061 0.02 ENSMUST00000032185.7
solute carrier family 6 (neurotransmitter transporter, taurine), member 6
chr7_-_116443439 0.02 ENSMUST00000170430.1
phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
chr14_-_65262391 0.02 ENSMUST00000131309.1
frizzled homolog 3 (Drosophila)
chr12_+_24831583 0.01 ENSMUST00000110942.3
ENSMUST00000078902.6
membrane bound O-acyltransferase domain containing 2
chr10_+_94036001 0.01 ENSMUST00000020208.4
FYVE, RhoGEF and PH domain containing 6
chrX_+_143099594 0.01 ENSMUST00000165829.1
retrotransposon gag domain containing 1
chr9_-_75683992 0.01 ENSMUST00000034699.6
secretogranin III
chr7_-_134938264 0.01 ENSMUST00000171394.1
family with sequence similarity 196, member A
chr4_-_20778527 0.01 ENSMUST00000119374.1
Na+/K+ transporting ATPase interacting 3
chr16_+_21204755 0.01 ENSMUST00000006112.6
Eph receptor B3
chr19_+_25236959 0.01 ENSMUST00000049400.8
KN motif and ankyrin repeat domains 1
chr11_-_3722189 0.01 ENSMUST00000102950.3
ENSMUST00000101632.3
oxysterol binding protein 2
chr13_+_54371340 0.01 ENSMUST00000026985.8
complexin 2
chr9_+_57589442 0.01 ENSMUST00000053230.6
unc-51-like kinase 3
chr9_-_89622986 0.01 ENSMUST00000044491.6
cDNA sequence AF529169
chr19_+_44562841 0.01 ENSMUST00000040455.4
hypoxia-inducible factor 1, alpha subunit inhibitor
chr5_-_122900267 0.01 ENSMUST00000031435.7
lysine (K)-specific demethylase 2B
chr8_-_105979413 0.01 ENSMUST00000034371.7
dipeptidase 3
chr4_-_132884509 0.01 ENSMUST00000030698.4
syntaxin 12
chr11_+_80300866 0.01 ENSMUST00000017836.7
rhomboid, veinlet-like 3 (Drosophila)
chr19_+_27322539 0.01 ENSMUST00000056708.3
potassium channel, subfamily V, member 2
chr1_-_165934900 0.01 ENSMUST00000069609.5
ENSMUST00000111427.2
ENSMUST00000111426.4
POU domain, class 2, transcription factor 1
chr8_+_14095849 0.01 ENSMUST00000152652.1
ENSMUST00000133298.1
discs, large (Drosophila) homolog-associated protein 2
chr12_-_104751900 0.01 ENSMUST00000041987.6
dicer 1, ribonuclease type III
chr19_-_24477356 0.01 ENSMUST00000099556.1
family with sequence similarity 122, member A
chr13_-_116309639 0.01 ENSMUST00000036060.6
ISL1 transcription factor, LIM/homeodomain
chr13_-_55362782 0.01 ENSMUST00000021940.7
lectin, mannose-binding 2
chr5_-_115158169 0.01 ENSMUST00000053271.5
ENSMUST00000112121.1
malectin
chr17_-_85090204 0.01 ENSMUST00000072406.3
ENSMUST00000171795.1
prolyl endopeptidase-like
chr11_-_103638862 0.01 ENSMUST00000107014.1
ENSMUST00000021328.7
lysozyme-like 6
chr10_+_50895651 0.01 ENSMUST00000020071.3
single-minded homolog 1 (Drosophila)
chr18_+_38250240 0.01 ENSMUST00000025314.5
RIKEN cDNA 0610009O20 gene
chr11_+_75531690 0.01 ENSMUST00000149727.1
ENSMUST00000042561.7
ENSMUST00000108433.1
ENSMUST00000143035.1
solute carrier family 43, member 2
chr12_-_85374696 0.01 ENSMUST00000040766.7
transmembrane emp24-like trafficking protein 10 (yeast)
chr1_-_165460430 0.01 ENSMUST00000027856.7
DDB1 and CUL4 associated factor 6
chr3_-_94786469 0.01 ENSMUST00000107273.1
cingulin
chr15_-_93275151 0.01 ENSMUST00000057896.4
ENSMUST00000049484.6
glucoside xylosyltransferase 1
chr1_-_13372434 0.01 ENSMUST00000081713.4
nuclear receptor coactivator 2
chr3_+_103575275 0.01 ENSMUST00000090697.4
synaptotagmin VI
chr2_+_65845767 0.01 ENSMUST00000122912.1
cysteine-serine-rich nuclear protein 3
chr4_-_134187019 0.01 ENSMUST00000040271.5
centrosomal protein 85
chr11_-_89418948 0.01 ENSMUST00000050983.1
RIKEN cDNA 4932411E22 gene
chr16_+_42907563 0.01 ENSMUST00000151244.1
ENSMUST00000114694.2
zinc finger and BTB domain containing 20
chr6_-_120038647 0.01 ENSMUST00000088646.5
ENSMUST00000177761.1
ENSMUST00000088644.6
ENSMUST00000060043.6
WNK lysine deficient protein kinase 1
chr11_-_86993682 0.01 ENSMUST00000018571.4
yippee-like 2 (Drosophila)
chr1_+_194619815 0.01 ENSMUST00000027952.5
plexin A2
chr4_+_106561027 0.01 ENSMUST00000047973.3
24-dehydrocholesterol reductase
chr1_-_56972437 0.01 ENSMUST00000042857.7
special AT-rich sequence binding protein 2
chr17_+_72918298 0.01 ENSMUST00000024857.6
limb-bud and heart
chr6_-_83775767 0.01 ENSMUST00000014892.6
testis expressed gene 261
chr9_-_75611308 0.01 ENSMUST00000064433.3
tropomodulin 2
chr8_+_107150621 0.01 ENSMUST00000034400.3
cytochrome b5 type B
chr5_-_92083455 0.01 ENSMUST00000169094.1
ENSMUST00000167918.1
GTPase activating protein (SH3 domain) binding protein 2
chr17_+_35823230 0.01 ENSMUST00000001569.8
ENSMUST00000174080.1
flotillin 1
chr7_-_35754394 0.01 ENSMUST00000051377.8
dpy-19-like 3 (C. elegans)
chr12_+_111538101 0.01 ENSMUST00000166123.1
eukaryotic translation initiation factor 5
chr3_+_126596951 0.01 ENSMUST00000106402.1
calcium/calmodulin-dependent protein kinase II, delta
chr7_+_134670667 0.01 ENSMUST00000084488.4
dedicator of cytokinesis 1
chr3_+_28263205 0.01 ENSMUST00000159236.2
TRAF2 and NCK interacting kinase
chr2_+_118901428 0.01 ENSMUST00000036578.6
bromo adjacent homology domain containing 1
chrX_-_164980310 0.01 ENSMUST00000004715.1
ENSMUST00000112248.2
motile sperm domain containing 2
chr1_+_60746358 0.01 ENSMUST00000027165.2
CD28 antigen
chr4_+_126103940 0.01 ENSMUST00000116286.2
ENSMUST00000094761.4
ENSMUST00000139524.1
serine/threonine kinase 40
chr16_+_13671922 0.01 ENSMUST00000035426.5
RIKEN cDNA 3110001I22 gene
chr19_-_6941428 0.01 ENSMUST00000025909.4
ENSMUST00000099774.3
G protein-coupled receptor 137
chr10_-_117845935 0.01 ENSMUST00000064667.7
RAS related protein 1b
chr5_-_76304474 0.01 ENSMUST00000075159.1
circadian locomotor output cycles kaput
chr17_+_47630690 0.01 ENSMUST00000024779.8
ubiquitin specific peptidase 49
chr7_+_97332311 0.01 ENSMUST00000054107.5
potassium channel tetramerisation domain containing 21
chr8_-_124949165 0.01 ENSMUST00000034469.5
EGL nine homolog 1 (C. elegans)
chr3_+_103914560 0.01 ENSMUST00000106806.1
rosbin, round spermatid basic protein 1
chr8_+_114205590 0.01 ENSMUST00000049509.6
ENSMUST00000150963.1
vesicle amine transport protein 1 homolog-like (T. californica)
chr9_+_45138437 0.01 ENSMUST00000060125.5
sodium channel, type IV, beta
chr16_-_4679703 0.01 ENSMUST00000038552.6
ENSMUST00000090480.4
coronin 7
chr12_+_55155104 0.01 ENSMUST00000110708.2
signal recognition particle 54B
chr12_+_84996309 0.01 ENSMUST00000168977.1
ENSMUST00000021670.8
YLP motif containing 1
chr17_+_86167777 0.00 ENSMUST00000097275.2
protein kinase C, epsilon
chr13_-_111808938 0.00 ENSMUST00000109267.2
mitogen-activated protein kinase kinase kinase 1
chr2_-_64097994 0.00 ENSMUST00000131615.2
fidgetin
chr1_+_162570687 0.00 ENSMUST00000050010.4
ENSMUST00000150040.1
vesicle-associated membrane protein 4
chr2_-_33371400 0.00 ENSMUST00000113164.1
ENSMUST00000091039.2
ENSMUST00000042615.6
Ral GEF with PH domain and SH3 binding motif 1
chr6_+_39381175 0.00 ENSMUST00000031986.4
RAB19, member RAS oncogene family
chr2_+_173737492 0.00 ENSMUST00000067530.4
vesicle-associated membrane protein, associated protein B and C
chr2_+_14604252 0.00 ENSMUST00000114723.2
calcium channel, voltage-dependent, beta 2 subunit
chr17_+_26138661 0.00 ENSMUST00000074370.3
ENSMUST00000118904.2
ENSMUST00000163421.1
axin 1
chr3_-_9610074 0.00 ENSMUST00000041124.7
zinc finger protein 704
chr16_+_33251415 0.00 ENSMUST00000023502.4
sorting nexin 4
chr6_+_4903298 0.00 ENSMUST00000035813.2
protein phosphatase 1, regulatory (inhibitor) subunit 9A
chr9_-_52679429 0.00 ENSMUST00000098768.2
expressed sequence AI593442
chr19_-_3575708 0.00 ENSMUST00000113997.2
ENSMUST00000025846.8
ENSMUST00000172362.1
protein phosphatase 6, regulatory subunit 3
chr11_-_120633594 0.00 ENSMUST00000058162.7
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
chr16_+_5050012 0.00 ENSMUST00000052449.5
ubinuclein 1
chr8_-_60983215 0.00 ENSMUST00000004430.7
ENSMUST00000110301.1
ENSMUST00000093490.2
chloride channel 3
chr15_+_86214431 0.00 ENSMUST00000063414.8
TBC1 domain family, member 22a
chr8_-_25201349 0.00 ENSMUST00000084512.4
ENSMUST00000084030.4
transforming, acidic coiled-coil containing protein 1
chr19_+_40831248 0.00 ENSMUST00000025983.6
ENSMUST00000120057.1
cyclin J
chr18_+_64887690 0.00 ENSMUST00000163516.1
neural precursor cell expressed, developmentally down-regulated gene 4-like
chr12_+_110737949 0.00 ENSMUST00000095410.2
WD repeat domain 20A
chr13_-_85288999 0.00 ENSMUST00000109552.2
RAS p21 protein activator 1
chr2_-_39226343 0.00 ENSMUST00000028087.3
protein phosphatase 6, catalytic subunit
chr16_-_4789984 0.00 ENSMUST00000004173.5
cell death inducing Trp53 target 1
chr6_+_149408973 0.00 ENSMUST00000086829.4
ENSMUST00000111513.2
bicaudal D homolog 1 (Drosophila)
chr12_+_55089202 0.00 ENSMUST00000021407.10
signal recognition particle 54A
chr3_+_58576636 0.00 ENSMUST00000107924.1
selenoprotein T
chr5_+_64803513 0.00 ENSMUST00000165536.1
Kruppel-like factor 3 (basic)
chr5_-_149636331 0.00 ENSMUST00000074846.7
ENSMUST00000110498.1
ENSMUST00000127977.1
ENSMUST00000132412.1
heat shock 105kDa/110kDa protein 1
chr1_-_151428440 0.00 ENSMUST00000064771.5
SWT1 RNA endoribonuclease homolog (S. cerevisiae)
chr10_-_25200110 0.00 ENSMUST00000100012.2
A kinase (PRKA) anchor protein 7
chr7_-_100583072 0.00 ENSMUST00000152876.1
ENSMUST00000150042.1
mitochondrial ribosomal protein L48
chr11_+_100574904 0.00 ENSMUST00000103120.4
2',3'-cyclic nucleotide 3' phosphodiesterase
chr11_+_75732869 0.00 ENSMUST00000067664.3
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
chr12_-_51971289 0.00 ENSMUST00000040583.5
HEAT repeat containing 5A
chr6_-_32588192 0.00 ENSMUST00000115096.2
plexin A4
chr5_+_123394782 0.00 ENSMUST00000111596.1
ENSMUST00000068237.5
MLX interacting protein
chr2_-_179976646 0.00 ENSMUST00000041618.7
TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr4_-_129335324 0.00 ENSMUST00000102598.3
retinoblastoma binding protein 4
chr14_-_79771305 0.00 ENSMUST00000039568.5
protocadherin 8
chr12_-_85339346 0.00 ENSMUST00000040992.7
NIMA (never in mitosis gene a)-related expressed kinase 9
chr13_+_93308006 0.00 ENSMUST00000079086.6
homer homolog 1 (Drosophila)
chr17_-_47688028 0.00 ENSMUST00000113301.1
ENSMUST00000113302.3
translocase of outer mitochondrial membrane 6 homolog (yeast)
chr4_+_116720920 0.00 ENSMUST00000045542.6
ENSMUST00000106459.1
testis-specific kinase 2
chr9_-_52168111 0.00 ENSMUST00000165519.1
zinc finger CCCH type containing 12C
chr12_+_110485710 0.00 ENSMUST00000084985.3
ENSMUST00000109832.1
protein phosphatase 2, regulatory subunit B (B56), gamma isoform
chr15_+_68928414 0.00 ENSMUST00000022954.6
KH domain containing, RNA binding, signal transduction associated 3
chr9_+_111311674 0.00 ENSMUST00000078626.3
tetratricopeptide repeat and ankyrin repeat containing 1
chr10_+_128377086 0.00 ENSMUST00000014642.3
ankyrin repeat domain 52
chr11_-_12037391 0.00 ENSMUST00000093321.5
growth factor receptor bound protein 10
chr6_-_59426279 0.00 ENSMUST00000051065.4
GPRIN family member 3
chrX_+_151344171 0.00 ENSMUST00000073364.5
family with sequence similarity 120, member C
chr1_-_16519284 0.00 ENSMUST00000162751.1
ENSMUST00000027052.6
ENSMUST00000149320.2
staufen (RNA binding protein) homolog 2 (Drosophila)
chr17_-_79896028 0.00 ENSMUST00000068282.5
ENSMUST00000112437.1
atlastin GTPase 2
chr15_-_98607611 0.00 ENSMUST00000096224.4
adenylate cyclase 6
chr2_-_35200923 0.00 ENSMUST00000028238.8
ENSMUST00000113025.1
RAB14, member RAS oncogene family
chr4_-_133753611 0.00 ENSMUST00000145664.2
ENSMUST00000105897.3
AT rich interactive domain 1A (SWI-like)
chr12_+_80644212 0.00 ENSMUST00000085245.5
solute carrier family 39 (zinc transporter), member 9
chr6_+_38433913 0.00 ENSMUST00000160583.1
ubinuclein 2
chr4_-_141723401 0.00 ENSMUST00000102484.4
ENSMUST00000177592.1
DNA-damage inducible protein 2
regulatory solute carrier protein, family 1, member 1
chr19_+_6276725 0.00 ENSMUST00000025684.3
EH-domain containing 1
chr9_+_52047150 0.00 ENSMUST00000163153.1
radixin
chr7_+_97579868 0.00 ENSMUST00000042399.7
ENSMUST00000107153.1
remodeling and spacing factor 1
chr6_+_8948608 0.00 ENSMUST00000160300.1
neurexophilin 1
chr19_-_41263931 0.00 ENSMUST00000025989.8
transmembrane 9 superfamily member 3
chrX_-_36645359 0.00 ENSMUST00000051906.6
A kinase (PRKA) anchor protein 17B
chr18_-_46525940 0.00 ENSMUST00000036226.5
fem-1 homolog c (C.elegans)
chr13_-_99516537 0.00 ENSMUST00000064762.4
microtubule-associated protein 1B
chr19_+_55316313 0.00 ENSMUST00000095950.2
vesicle transport through interaction with t-SNAREs 1A
chr5_-_67427794 0.00 ENSMUST00000169190.1
BEN domain containing 4
chr15_+_44428073 0.00 ENSMUST00000060652.3
enhancer of yellow 2 homolog (Drosophila)
chr9_+_108986163 0.00 ENSMUST00000052724.3
urocortin 2
chr11_-_106193511 0.00 ENSMUST00000007444.7
ENSMUST00000152008.1
ENSMUST00000103072.3
ENSMUST00000106867.1
STE20-related kinase adaptor alpha
chr4_+_106911470 0.00 ENSMUST00000030367.8
ENSMUST00000149926.1
single-stranded DNA binding protein 3
chr1_+_153899937 0.00 ENSMUST00000086199.5
glutamate-ammonia ligase (glutamine synthetase)
chr16_-_46496955 0.00 ENSMUST00000023335.6
ENSMUST00000023334.8
poliovirus receptor-related 3
chr1_-_169747634 0.00 ENSMUST00000027991.5
ENSMUST00000111357.1
regulator of G-protein signaling 4
chr12_+_111039334 0.00 ENSMUST00000084968.7
REST corepressor 1
chr2_-_156992021 0.00 ENSMUST00000109558.1
ENSMUST00000069600.6
ENSMUST00000072298.6
N-myc downstream regulated gene 3
chr13_+_44731265 0.00 ENSMUST00000173246.1
jumonji, AT rich interactive domain 2
chr12_-_98901478 0.00 ENSMUST00000065716.6
echinoderm microtubule associated protein like 5
chr4_-_133672601 0.00 ENSMUST00000062118.4
ENSMUST00000067902.6
phosphatidylinositol glycan anchor biosynthesis, class V

Network of associatons between targets according to the STRING database.

First level regulatory network of GGCAAGA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0019072 viral genome packaging(GO:0019072) viral RNA genome packaging(GO:0019074)