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12D miR HR13_24

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Results for Nr4a3

Z-value: 0.53

Motif logo

Transcription factors associated with Nr4a3

Gene Symbol Gene ID Gene Info
ENSMUSG00000028341.3 nuclear receptor subfamily 4, group A, member 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Nr4a3mm10_v2_chr4_+_48049080_480491140.235.0e-01Click!

Activity profile of Nr4a3 motif

Sorted Z-values of Nr4a3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr9_-_46235260 0.38 ENSMUST00000121916.1
ENSMUST00000034586.2
apolipoprotein C-III
chr19_+_45998131 0.31 ENSMUST00000181820.1
RIKEN cDNA 4930505N22 gene
chr1_-_152386589 0.24 ENSMUST00000162371.1
tRNA splicing endonuclease 15 homolog (S. cerevisiae)
chr7_+_30712209 0.20 ENSMUST00000005692.6
ENSMUST00000170371.1
ATPase, H+/K+ exchanging, gastric, alpha polypeptide
chr1_+_93215899 0.18 ENSMUST00000138595.1
RIKEN cDNA E030010N08 gene
chr4_-_152128858 0.17 ENSMUST00000049305.7
espin
chr2_-_157279519 0.17 ENSMUST00000143663.1
maestro heat-like repeat family member 8
chr6_+_41546730 0.17 ENSMUST00000103299.1
T cell receptor beta, constant 2
chr12_-_110978981 0.16 ENSMUST00000135131.1
ENSMUST00000043459.6
ENSMUST00000128353.1
ankyrin repeat domain 9
chr17_-_35909626 0.16 ENSMUST00000141132.1
alpha tubulin acetyltransferase 1
chr9_-_54661666 0.16 ENSMUST00000128624.1
acyl-CoA synthetase bubblegum family member 1
chr10_+_59403644 0.14 ENSMUST00000009790.7
phospholipase A2, group XIIB
chr9_-_46235631 0.14 ENSMUST00000118649.1
apolipoprotein C-III
chr3_-_104818539 0.13 ENSMUST00000106774.1
ENSMUST00000106775.1
ENSMUST00000166979.1
ENSMUST00000136148.1
Moloney leukemia virus 10
chr8_-_123894736 0.13 ENSMUST00000034453.4
actin, alpha 1, skeletal muscle
chr6_-_138426735 0.13 ENSMUST00000162932.1
LIM domain only 3
chr17_-_35910032 0.12 ENSMUST00000141662.1
ENSMUST00000056034.6
ENSMUST00000077494.6
ENSMUST00000149277.1
ENSMUST00000061052.5
alpha tubulin acetyltransferase 1
chr3_-_104818224 0.12 ENSMUST00000002297.5
Moloney leukemia virus 10
chr16_+_10545390 0.12 ENSMUST00000115827.1
ENSMUST00000038145.6
ENSMUST00000150894.1
C-type lectin domain family 16, member A
chr15_-_79804717 0.12 ENSMUST00000023057.8
neuronal pentraxin receptor
chr5_-_66151903 0.11 ENSMUST00000167950.1
RNA binding motif protein 47
chr4_+_137993016 0.11 ENSMUST00000105830.2
ENSMUST00000084215.5
ENSMUST00000058133.3
ENSMUST00000139759.1
eukaryotic translation initiation factor 4 gamma, 3
chr11_-_3504766 0.11 ENSMUST00000044507.5
inositol polyphosphate 5-phosphatase J
chr7_-_128206346 0.11 ENSMUST00000033049.7
cytochrome c oxidase subunit VIa polypeptide 2
chr17_+_17831004 0.10 ENSMUST00000172097.2
RIKEN cDNA 4930546H06 gene
chr11_+_75510077 0.10 ENSMUST00000042972.6
Rab interacting lysosomal protein
chr12_-_110978618 0.10 ENSMUST00000140788.1
ankyrin repeat domain 9
chr11_+_83850832 0.10 ENSMUST00000021016.3
HNF1 homeobox B
chr7_-_79842287 0.10 ENSMUST00000049004.6
alanyl (membrane) aminopeptidase
chr4_+_134396320 0.10 ENSMUST00000105869.2
platelet-activating factor acetylhydrolase 2
chr6_-_137571007 0.10 ENSMUST00000100841.2
epidermal growth factor receptor pathway substrate 8
chr10_-_127370535 0.09 ENSMUST00000026472.8
inhibin beta-C
chr16_+_10545339 0.09 ENSMUST00000066345.7
ENSMUST00000115824.3
ENSMUST00000155633.1
C-type lectin domain family 16, member A
chr12_-_110978943 0.09 ENSMUST00000142012.1
ankyrin repeat domain 9
chr11_+_83850863 0.09 ENSMUST00000108114.2
HNF1 homeobox B
chrX_+_73675500 0.09 ENSMUST00000171398.1
solute carrier family 6 (neurotransmitter transporter, creatine), member 8
chr3_-_104818266 0.09 ENSMUST00000168015.1
Moloney leukemia virus 10
chr18_-_60624201 0.09 ENSMUST00000155195.2
synaptopodin
chr19_-_4334001 0.09 ENSMUST00000176653.1
lysine (K)-specific demethylase 2A
chr10_-_20725023 0.08 ENSMUST00000020165.7
phosphodiesterase 7B
chr9_-_70141484 0.08 ENSMUST00000034749.8
family with sequence similarity 81, member A
chr8_+_13026024 0.08 ENSMUST00000033820.3
coagulation factor VII
chr4_-_129227883 0.08 ENSMUST00000106051.1
expressed sequence C77080
chr12_-_111672290 0.08 ENSMUST00000001304.7
creatine kinase, brain
chr17_+_34605855 0.07 ENSMUST00000037489.8
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
chr1_+_75435930 0.07 ENSMUST00000037796.7
ENSMUST00000113584.1
ENSMUST00000145166.1
ENSMUST00000143730.1
ENSMUST00000133418.1
ENSMUST00000144874.1
ENSMUST00000140287.1
GDP-mannose pyrophosphorylase A
chr19_-_37207293 0.07 ENSMUST00000132580.1
ENSMUST00000079754.4
ENSMUST00000136286.1
ENSMUST00000126188.1
ENSMUST00000126781.1
cytoplasmic polyadenylation element binding protein 3
chr11_-_100822525 0.07 ENSMUST00000107358.2
signal transducer and activator of transcription 5B
chr4_+_43578921 0.07 ENSMUST00000030190.8
RGP1 retrograde golgi transport homolog (S. cerevisiae)
chr7_-_126475082 0.07 ENSMUST00000032978.6
SH2B adaptor protein 1
chr8_+_119862239 0.07 ENSMUST00000034287.8
kelch-like 36
chr15_-_79141197 0.07 ENSMUST00000169604.1
RIKEN cDNA 1700088E04 gene
chr15_+_100761741 0.06 ENSMUST00000023776.6
solute carrier family 4 (anion exchanger), member 8
chr4_-_41697040 0.06 ENSMUST00000102962.3
ENSMUST00000084701.5
ciliary neurotrophic factor receptor
chr11_+_115475645 0.06 ENSMUST00000035240.6
armadillo repeat containing 7
chr18_-_60624304 0.06 ENSMUST00000097566.3
synaptopodin
chr11_-_115267236 0.06 ENSMUST00000106554.1
glutamate receptor, ionotropic, NMDA2C (epsilon 3)
chr4_+_150914562 0.06 ENSMUST00000135169.1
tumor necrosis factor receptor superfamily, member 9
chr11_+_90638127 0.06 ENSMUST00000020851.8
cytochrome c oxidase assembly protein 11
chr19_+_46152505 0.05 ENSMUST00000026254.7
golgi-specific brefeldin A-resistance factor 1
chr7_-_79466167 0.05 ENSMUST00000073889.7
polymerase (DNA directed), gamma
chr7_-_28598140 0.05 ENSMUST00000040531.8
ENSMUST00000108283.1
sterile alpha motif domain containing 4B
p21 protein (Cdc42/Rac)-activated kinase 4
chr11_-_53423123 0.05 ENSMUST00000036045.5
liver-expressed antimicrobial peptide 2
chr7_-_19715395 0.05 ENSMUST00000032555.9
ENSMUST00000093552.5
translocase of outer mitochondrial membrane 40 homolog (yeast)
chr16_-_20730544 0.05 ENSMUST00000076422.5
thrombopoietin
chr7_-_109616548 0.04 ENSMUST00000077909.1
ENSMUST00000084738.3
suppression of tumorigenicity 5
chr11_+_74649462 0.04 ENSMUST00000092915.5
ENSMUST00000117818.1
clustered mitochondria (cluA/CLU1) homolog
chr13_+_54192106 0.04 ENSMUST00000038101.3
histamine receptor H2
chr2_+_157279065 0.04 ENSMUST00000029171.5
ribophorin II
chr4_+_134397380 0.03 ENSMUST00000105870.1
platelet-activating factor acetylhydrolase 2
chr9_+_110849507 0.03 ENSMUST00000119427.2
protease, serine, 46
chr9_-_119578981 0.03 ENSMUST00000117911.1
ENSMUST00000120420.1
sodium channel, voltage-gated, type V, alpha
chr11_-_61494173 0.03 ENSMUST00000101085.2
ENSMUST00000079080.6
ENSMUST00000108714.1
mitogen-activated protein kinase 7
chr2_+_158794807 0.03 ENSMUST00000029186.7
ENSMUST00000109478.2
ENSMUST00000156893.1
DEAH (Asp-Glu-Ala-His) box polypeptide 35
chr4_+_154960915 0.03 ENSMUST00000049621.6
hairy and enhancer of split 5 (Drosophila)
chr2_+_178141920 0.03 ENSMUST00000103066.3
phosphatase and actin regulator 3
chr7_+_102267795 0.03 ENSMUST00000033289.4
stromal interaction molecule 1
chr6_-_116716888 0.03 ENSMUST00000056623.6
transmembrane protein 72
chr2_+_157279026 0.03 ENSMUST00000116380.2
ribophorin II
chr18_-_62179948 0.03 ENSMUST00000053640.3
adrenergic receptor, beta 2
chr7_+_45897429 0.03 ENSMUST00000140243.1
transmembrane protein 143
chr12_-_84194007 0.03 ENSMUST00000110294.1
ELM2 and Myb/SANT-like domain containing 1
chr15_-_102516806 0.03 ENSMUST00000169162.1
ENSMUST00000023812.2
ENSMUST00000165174.1
ENSMUST00000169367.1
ENSMUST00000169377.1
mitogen-activated protein kinase kinase kinase 12
chr2_-_165283599 0.03 ENSMUST00000155289.1
solute carrier family 35, member C2
chr15_+_76343504 0.03 ENSMUST00000023210.6
cytochrome c-1
chr2_-_59160644 0.03 ENSMUST00000077687.5
coiled-coil domain containing 148
chr19_-_45998479 0.03 ENSMUST00000045396.7
RIKEN cDNA 9130011E15 gene
chr7_-_127345314 0.02 ENSMUST00000060783.5
zinc finger protein 768
chr5_+_66968559 0.02 ENSMUST00000127184.1
LIM and calponin homology domains 1
chr8_-_120668121 0.02 ENSMUST00000034277.7
ER membrane protein complex subunit 8
chr11_+_70657196 0.02 ENSMUST00000157027.1
ENSMUST00000072841.5
ENSMUST00000108548.1
ENSMUST00000126241.1
enolase 3, beta muscle
chr9_+_75071148 0.02 ENSMUST00000123128.1
myosin VA
chr9_-_22085391 0.02 ENSMUST00000179422.1
ENSMUST00000098937.3
ENSMUST00000177967.1
ENSMUST00000180180.1
ECSIT homolog (Drosophila)
chr19_+_44989073 0.02 ENSMUST00000026225.8
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
chr2_-_76868375 0.02 ENSMUST00000149616.1
ENSMUST00000152185.1
ENSMUST00000130915.1
ENSMUST00000155365.1
ENSMUST00000128071.1
titin
chr9_+_22003035 0.02 ENSMUST00000115331.2
ENSMUST00000003493.7
protein kinase C substrate 80K-H
chr6_-_112946754 0.02 ENSMUST00000113169.2
SLIT-ROBO Rho GTPase activating protein 3
chr4_-_126202583 0.02 ENSMUST00000106142.1
ENSMUST00000169403.1
ENSMUST00000130334.1
thyroid hormone receptor associated protein 3
chr1_+_137966529 0.02 ENSMUST00000182158.1
RIKEN cDNA A430106G13 gene
chr11_+_70657687 0.02 ENSMUST00000134087.1
ENSMUST00000170716.1
enolase 3, beta muscle
chr4_+_131873608 0.02 ENSMUST00000053819.3
serine/arginine-rich splicing factor 4
chr4_+_126058557 0.02 ENSMUST00000035497.4
organic solute carrier partner 1
chr4_-_150914401 0.01 ENSMUST00000105675.1
Parkinson disease (autosomal recessive, early onset) 7
chr9_-_22002599 0.01 ENSMUST00000115336.2
ENSMUST00000044926.5
coiled-coil domain containing 151
chr11_+_70764209 0.01 ENSMUST00000060444.5
zinc finger protein 3
chr14_-_21848924 0.01 ENSMUST00000124549.1
catechol-O-methyltransferase domain containing 1
chr4_-_126202757 0.01 ENSMUST00000080919.5
thyroid hormone receptor associated protein 3
chr19_-_4498574 0.01 ENSMUST00000048482.6
RIKEN cDNA 2010003K11 gene
chr2_-_167492826 0.01 ENSMUST00000109211.2
ENSMUST00000057627.9
spermatogenesis associated 2
chr12_+_4082574 0.01 ENSMUST00000020986.7
DnaJ (Hsp40) homolog, subfamily C, member 27
chrX_-_150589844 0.01 ENSMUST00000112725.1
ENSMUST00000112720.1
apurinic/apyrimidinic endonuclease 2
chr8_-_120668058 0.01 ENSMUST00000181333.1
ENSMUST00000181950.1
predicted gene, 27021
ER membrane protein complex subunit 8
chr9_+_75071386 0.01 ENSMUST00000155282.2
myosin VA
chr12_-_111966954 0.00 ENSMUST00000021719.5
RIKEN cDNA 2010107E04 gene
chr5_+_66968416 0.00 ENSMUST00000038188.7
LIM and calponin homology domains 1
chr13_-_41847599 0.00 ENSMUST00000179758.1
androgen dependent TFPI regulating protein
chr11_-_99244058 0.00 ENSMUST00000103132.3
ENSMUST00000038214.6
keratin 222
chr15_-_76200577 0.00 ENSMUST00000169108.1
ENSMUST00000170728.1
plectin
chr9_-_64341145 0.00 ENSMUST00000120760.1
ENSMUST00000168844.2
DIS3 mitotic control homolog (S. cerevisiae)-like
chr13_-_41847482 0.00 ENSMUST00000072012.3
androgen dependent TFPI regulating protein
chrX_+_18162575 0.00 ENSMUST00000044484.6
ENSMUST00000052368.8
lysine (K)-specific demethylase 6A
chr4_-_43578824 0.00 ENSMUST00000030189.7
glucosidase beta 2
chr1_+_36691487 0.00 ENSMUST00000081180.4
cytochrome c oxidase subunit Vb
chr7_-_98162318 0.00 ENSMUST00000107112.1
calpain 5

Network of associatons between targets according to the STRING database.

First level regulatory network of Nr4a3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0010982 regulation of high-density lipoprotein particle clearance(GO:0010982)
0.1 0.3 GO:0071929 alpha-tubulin acetylation(GO:0071929)
0.1 0.3 GO:0035279 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.2 GO:1901146 regulation of pronephros size(GO:0035565) mesonephros morphogenesis(GO:0061206) mesonephric nephron development(GO:0061215) mesonephric nephron morphogenesis(GO:0061228) mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis(GO:0061235) regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis(GO:0061295) negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis(GO:0061296) mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis(GO:1901146)
0.0 0.2 GO:1901097 negative regulation of autophagosome maturation(GO:1901097)
0.0 0.1 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.0 0.1 GO:0015881 creatine transport(GO:0015881)
0.0 0.1 GO:0098886 modification of dendritic spine(GO:0098886)
0.0 0.2 GO:0030046 parallel actin filament bundle assembly(GO:0030046)
0.0 0.1 GO:1900247 cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)
0.0 0.1 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.1 GO:0010641 positive regulation of platelet-derived growth factor receptor signaling pathway(GO:0010641)
0.0 0.1 GO:0030240 skeletal muscle thin filament assembly(GO:0030240)
0.0 0.1 GO:0070973 COPI-coated vesicle budding(GO:0035964) protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.0 GO:2000978 negative regulation of forebrain neuron differentiation(GO:2000978)
0.0 0.1 GO:0060903 positive regulation of meiosis I(GO:0060903)
0.0 0.1 GO:0033058 directional locomotion(GO:0033058)
0.0 0.1 GO:0003360 brainstem development(GO:0003360)
0.0 0.1 GO:2001183 negative regulation of interleukin-12 secretion(GO:2001183)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.0 GO:0001698 gastrin-induced gastric acid secretion(GO:0001698)
0.0 0.1 GO:0046544 development of secondary male sexual characteristics(GO:0046544) response to interleukin-15(GO:0070672)
0.0 0.0 GO:0038163 thrombopoietin-mediated signaling pathway(GO:0038163)
0.0 0.0 GO:0086047 membrane depolarization during Purkinje myocyte cell action potential(GO:0086047)
0.0 0.0 GO:0070375 ERK5 cascade(GO:0070375)
0.0 0.1 GO:0033184 positive regulation of histone ubiquitination(GO:0033184)
0.0 0.2 GO:0010155 regulation of proton transport(GO:0010155)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0036019 endolysosome(GO:0036019)
0.0 0.5 GO:0034363 intermediate-density lipoprotein particle(GO:0034363)
0.0 0.3 GO:0097427 microtubule bundle(GO:0097427)
0.0 0.1 GO:0097444 spine apparatus(GO:0097444)
0.0 0.2 GO:0042571 immunoglobulin complex, circulating(GO:0042571)
0.0 0.1 GO:0031983 vesicle lumen(GO:0031983)
0.0 0.1 GO:0070110 ciliary neurotrophic factor receptor complex(GO:0070110)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0070653 high-density lipoprotein particle receptor binding(GO:0070653)
0.0 0.3 GO:0004468 lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.0 0.1 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.0 0.2 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.0 0.1 GO:0005308 creatine transmembrane transporter activity(GO:0005308)
0.0 0.1 GO:0001847 opsonin receptor activity(GO:0001847)
0.0 0.2 GO:0008556 sodium:potassium-exchanging ATPase activity(GO:0005391) potassium-transporting ATPase activity(GO:0008556)
0.0 0.1 GO:0004111 creatine kinase activity(GO:0004111)
0.0 0.1 GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity(GO:0003847)
0.0 0.1 GO:0045322 unmethylated CpG binding(GO:0045322)
0.0 0.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.1 REACTOME GLYCOPROTEIN HORMONES Genes involved in Glycoprotein hormones
0.0 0.3 REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION Genes involved in Pre-NOTCH Transcription and Translation