12D miR HR13_24
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Cdx2
|
ENSMUSG00000029646.3 | caudal type homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Cdx2 | mm10_v2_chr5_-_147307264_147307281 | -0.57 | 6.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_44016387 | 2.32 |
ENSMUST00000036174.3
|
Gramd1c
|
GRAM domain containing 1C |
chr4_-_137118135 | 1.79 |
ENSMUST00000154285.1
|
Gm13001
|
predicted gene 13001 |
chr2_-_24048857 | 1.44 |
ENSMUST00000114497.1
|
Hnmt
|
histamine N-methyltransferase |
chr13_+_89540636 | 1.39 |
ENSMUST00000022108.7
|
Hapln1
|
hyaluronan and proteoglycan link protein 1 |
chr9_-_21989427 | 1.24 |
ENSMUST00000045726.6
|
Rgl3
|
ral guanine nucleotide dissociation stimulator-like 3 |
chr19_-_34879452 | 1.18 |
ENSMUST00000036584.5
|
Pank1
|
pantothenate kinase 1 |
chrX_+_164140447 | 1.07 |
ENSMUST00000073973.4
|
Ace2
|
angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 |
chr6_+_71199827 | 0.96 |
ENSMUST00000067492.7
|
Fabp1
|
fatty acid binding protein 1, liver |
chr11_-_99979053 | 0.94 |
ENSMUST00000105051.1
|
Krtap29-1
|
keratin associated protein 29-1 |
chrX_+_139684980 | 0.88 |
ENSMUST00000096313.3
|
Tbc1d8b
|
TBC1 domain family, member 8B |
chr17_-_90088343 | 0.81 |
ENSMUST00000173917.1
|
Nrxn1
|
neurexin I |
chr17_-_91092715 | 0.75 |
ENSMUST00000160800.2
ENSMUST00000159778.1 ENSMUST00000160844.3 |
Nrxn1
|
neurexin I |
chr3_+_40540751 | 0.73 |
ENSMUST00000091186.3
|
Intu
|
inturned planar cell polarity effector homolog (Drosophila) |
chr7_+_131032061 | 0.72 |
ENSMUST00000084509.3
|
Dmbt1
|
deleted in malignant brain tumors 1 |
chr6_-_13839916 | 0.66 |
ENSMUST00000060442.7
|
Gpr85
|
G protein-coupled receptor 85 |
chr11_-_99244058 | 0.63 |
ENSMUST00000103132.3
ENSMUST00000038214.6 |
Krt222
|
keratin 222 |
chr1_+_109993982 | 0.58 |
ENSMUST00000027542.6
|
Cdh7
|
cadherin 7, type 2 |
chr11_-_99993992 | 0.56 |
ENSMUST00000105049.1
|
Krtap17-1
|
keratin associated protein 17-1 |
chr11_+_87663087 | 0.56 |
ENSMUST00000165679.1
|
Rnf43
|
ring finger protein 43 |
chr3_-_90695706 | 0.53 |
ENSMUST00000069960.5
ENSMUST00000117167.1 |
S100a9
|
S100 calcium binding protein A9 (calgranulin B) |
chr1_-_169747634 | 0.53 |
ENSMUST00000027991.5
ENSMUST00000111357.1 |
Rgs4
|
regulator of G-protein signaling 4 |
chr3_+_126597415 | 0.53 |
ENSMUST00000066452.7
ENSMUST00000171289.1 ENSMUST00000106399.1 |
Camk2d
|
calcium/calmodulin-dependent protein kinase II, delta |
chr8_-_105933832 | 0.48 |
ENSMUST00000034368.6
|
Ctrl
|
chymotrypsin-like |
chr10_+_52391606 | 0.48 |
ENSMUST00000067085.4
|
Nepn
|
nephrocan |
chr5_+_13399309 | 0.46 |
ENSMUST00000030714.7
ENSMUST00000141968.1 |
Sema3a
|
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A |
chr4_-_64046925 | 0.41 |
ENSMUST00000107377.3
|
Tnc
|
tenascin C |
chr8_+_54550324 | 0.41 |
ENSMUST00000033918.2
|
Asb5
|
ankyrin repeat and SOCs box-containing 5 |
chr3_+_3634145 | 0.40 |
ENSMUST00000108394.1
|
Hnf4g
|
hepatocyte nuclear factor 4, gamma |
chrX_-_51205990 | 0.39 |
ENSMUST00000114876.2
|
Mbnl3
|
muscleblind-like 3 (Drosophila) |
chr18_+_37755718 | 0.36 |
ENSMUST00000061279.7
|
Pcdhga9
|
protocadherin gamma subfamily A, 9 |
chr13_-_23934156 | 0.35 |
ENSMUST00000052776.2
|
Hist1h2ba
|
histone cluster 1, H2ba |
chr5_-_135744206 | 0.34 |
ENSMUST00000153399.1
ENSMUST00000043378.2 |
Tmem120a
|
transmembrane protein 120A |
chr19_+_8850785 | 0.33 |
ENSMUST00000096257.2
|
Lrrn4cl
|
LRRN4 C-terminal like |
chr12_+_77238093 | 0.33 |
ENSMUST00000177595.1
ENSMUST00000171770.2 |
Fut8
|
fucosyltransferase 8 |
chr3_+_126597299 | 0.33 |
ENSMUST00000106400.2
ENSMUST00000106401.1 |
Camk2d
|
calcium/calmodulin-dependent protein kinase II, delta |
chr14_+_80000292 | 0.32 |
ENSMUST00000088735.3
|
Olfm4
|
olfactomedin 4 |
chr4_+_144893127 | 0.32 |
ENSMUST00000142808.1
|
Dhrs3
|
dehydrogenase/reductase (SDR family) member 3 |
chr14_+_54686171 | 0.30 |
ENSMUST00000038539.6
|
1700123O20Rik
|
RIKEN cDNA 1700123O20 gene |
chr10_+_118204942 | 0.26 |
ENSMUST00000096691.4
|
Il22
|
interleukin 22 |
chr1_-_89933290 | 0.26 |
ENSMUST00000036954.7
|
Gbx2
|
gastrulation brain homeobox 2 |
chr3_-_92485886 | 0.23 |
ENSMUST00000054599.7
|
Sprr1a
|
small proline-rich protein 1A |
chr15_-_101491509 | 0.20 |
ENSMUST00000023718.7
|
5430421N21Rik
|
RIKEN cDNA 5430421N21 gene |
chr10_-_34044302 | 0.19 |
ENSMUST00000048052.5
|
Fam26d
|
family with sequence similarity 26, member D |
chr1_+_12692430 | 0.18 |
ENSMUST00000180062.1
ENSMUST00000177608.1 |
Sulf1
|
sulfatase 1 |
chr11_-_99438143 | 0.16 |
ENSMUST00000017743.2
|
Krt20
|
keratin 20 |
chr17_+_80307396 | 0.15 |
ENSMUST00000068175.5
|
Arhgef33
|
Rho guanine nucleotide exchange factor (GEF) 33 |
chr12_+_113074756 | 0.15 |
ENSMUST00000109729.2
|
Tex22
|
testis expressed gene 22 |
chr1_-_186705980 | 0.14 |
ENSMUST00000045288.8
|
Tgfb2
|
transforming growth factor, beta 2 |
chr13_-_107890059 | 0.14 |
ENSMUST00000105097.2
|
Zswim6
|
zinc finger SWIM-type containing 6 |
chr1_-_144249134 | 0.14 |
ENSMUST00000172388.1
|
Rgs1
|
regulator of G-protein signaling 1 |
chr2_+_74721978 | 0.13 |
ENSMUST00000047904.3
|
Hoxd3
|
homeobox D3 |
chr6_+_17491216 | 0.11 |
ENSMUST00000080469.5
|
Met
|
met proto-oncogene |
chr2_+_4300462 | 0.11 |
ENSMUST00000175669.1
|
Frmd4a
|
FERM domain containing 4A |
chr15_-_101573883 | 0.10 |
ENSMUST00000042957.5
|
Krt75
|
keratin 75 |
chr19_-_47692042 | 0.09 |
ENSMUST00000026045.7
ENSMUST00000086923.5 |
Col17a1
|
collagen, type XVII, alpha 1 |
chr8_+_94386486 | 0.09 |
ENSMUST00000034220.7
|
Herpud1
|
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 |
chrX_+_164090187 | 0.08 |
ENSMUST00000015545.3
|
Tmem27
|
transmembrane protein 27 |
chr12_+_113074475 | 0.07 |
ENSMUST00000012355.7
ENSMUST00000146107.1 |
Tex22
|
testis expressed gene 22 |
chr4_-_109202217 | 0.06 |
ENSMUST00000160774.1
ENSMUST00000030288.7 ENSMUST00000162787.2 |
Osbpl9
|
oxysterol binding protein-like 9 |
chr2_-_64393853 | 0.05 |
ENSMUST00000142353.1
|
Gm13575
|
predicted gene 13575 |
chr6_-_71262232 | 0.04 |
ENSMUST00000129630.2
ENSMUST00000114186.2 ENSMUST00000074301.3 |
Smyd1
|
SET and MYND domain containing 1 |
chr8_+_94386438 | 0.04 |
ENSMUST00000161576.1
|
Herpud1
|
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 |
chr18_+_37513652 | 0.04 |
ENSMUST00000061405.4
|
Pcdhb21
|
protocadherin beta 21 |
chr16_-_79091078 | 0.04 |
ENSMUST00000023566.4
ENSMUST00000060402.5 |
Tmprss15
|
transmembrane protease, serine 15 |
chr8_+_15057646 | 0.03 |
ENSMUST00000033842.3
|
Myom2
|
myomesin 2 |
chr18_+_65582281 | 0.03 |
ENSMUST00000183319.1
|
Zfp532
|
zinc finger protein 532 |
chr15_+_23036449 | 0.02 |
ENSMUST00000164787.1
|
Cdh18
|
cadherin 18 |
chr6_-_122340525 | 0.02 |
ENSMUST00000112600.2
|
Phc1
|
polyhomeotic-like 1 (Drosophila) |
chr5_+_90460889 | 0.01 |
ENSMUST00000031314.8
|
Alb
|
albumin |
chr6_+_38918969 | 0.01 |
ENSMUST00000003017.6
|
Tbxas1
|
thromboxane A synthase 1, platelet |
chr3_-_142169196 | 0.00 |
ENSMUST00000098568.1
|
Bmpr1b
|
bone morphogenetic protein receptor, type 1B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 1.6 | GO:0090126 | protein complex assembly involved in synapse maturation(GO:0090126) |
0.4 | 1.4 | GO:0001692 | histamine metabolic process(GO:0001692) |
0.3 | 1.1 | GO:0015801 | aromatic amino acid transport(GO:0015801) tryptophan transport(GO:0015827) |
0.2 | 0.5 | GO:0070488 | neutrophil aggregation(GO:0070488) |
0.1 | 0.9 | GO:0035022 | positive regulation of Rac protein signal transduction(GO:0035022) |
0.1 | 0.5 | GO:0021828 | cerebral cortex tangential migration using cell-axon interactions(GO:0021824) gonadotrophin-releasing hormone neuronal migration to the hypothalamus(GO:0021828) hypothalamic tangential migration using cell-axon interactions(GO:0021856) facioacoustic ganglion development(GO:1903375) |
0.1 | 0.4 | GO:0060447 | peripheral nervous system axon regeneration(GO:0014012) bud outgrowth involved in lung branching(GO:0060447) |
0.1 | 0.6 | GO:0038018 | Wnt receptor catabolic process(GO:0038018) |
0.1 | 0.3 | GO:0046368 | GDP-L-fucose metabolic process(GO:0046368) |
0.1 | 1.2 | GO:0015937 | coenzyme A biosynthetic process(GO:0015937) |
0.1 | 1.0 | GO:0032000 | positive regulation of fatty acid beta-oxidation(GO:0032000) |
0.1 | 0.7 | GO:0010839 | negative regulation of keratinocyte proliferation(GO:0010839) |
0.0 | 0.1 | GO:0003275 | endocardial cushion fusion(GO:0003274) apoptotic process involved in outflow tract morphogenesis(GO:0003275) regulation of catagen(GO:0051794) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256) |
0.0 | 0.2 | GO:0014846 | esophagus smooth muscle contraction(GO:0014846) |
0.0 | 0.3 | GO:0035093 | spermatogenesis, exchange of chromosomal proteins(GO:0035093) |
0.0 | 0.7 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.0 | 0.3 | GO:0021555 | midbrain-hindbrain boundary morphogenesis(GO:0021555) |
0.0 | 0.1 | GO:1903071 | positive regulation of ER-associated ubiquitin-dependent protein catabolic process(GO:1903071) |
0.0 | 0.3 | GO:0048387 | negative regulation of retinoic acid receptor signaling pathway(GO:0048387) |
0.0 | 0.1 | GO:0070495 | regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495) |
0.0 | 0.2 | GO:0031424 | keratinization(GO:0031424) |
0.0 | 1.0 | GO:0031338 | regulation of vesicle fusion(GO:0031338) |
0.0 | 0.4 | GO:0045662 | negative regulation of myoblast differentiation(GO:0045662) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.1 | 1.6 | GO:0036056 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
0.1 | 1.0 | GO:0045179 | apical cortex(GO:0045179) |
0.0 | 1.0 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 0.9 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 0.1 | GO:1990037 | Lewy body core(GO:1990037) |
0.0 | 0.3 | GO:0042581 | specific granule(GO:0042581) |
0.0 | 0.3 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.0 | 0.7 | GO:0043194 | axon initial segment(GO:0043194) |
0.0 | 0.2 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 1.2 | GO:0030118 | clathrin coat(GO:0030118) |
0.0 | 0.8 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.2 | GO:0004594 | pantothenate kinase activity(GO:0004594) |
0.2 | 1.2 | GO:0008321 | Ral guanyl-nucleotide exchange factor activity(GO:0008321) |
0.2 | 1.1 | GO:0008241 | peptidyl-dipeptidase activity(GO:0008241) |
0.1 | 1.0 | GO:0005324 | long-chain fatty acid transporter activity(GO:0005324) |
0.1 | 1.6 | GO:0097109 | neuroligin family protein binding(GO:0097109) |
0.1 | 0.9 | GO:0019871 | sodium channel inhibitor activity(GO:0019871) |
0.1 | 0.2 | GO:0030280 | structural constituent of epidermis(GO:0030280) |
0.1 | 0.5 | GO:0050786 | Toll-like receptor 4 binding(GO:0035662) RAGE receptor binding(GO:0050786) |
0.1 | 1.4 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.1 | 0.4 | GO:0045545 | syndecan binding(GO:0045545) |
0.0 | 0.3 | GO:0052650 | NADP-retinol dehydrogenase activity(GO:0052650) |
0.0 | 0.1 | GO:0034714 | type III transforming growth factor beta receptor binding(GO:0034714) |
0.0 | 0.2 | GO:0008449 | N-acetylglucosamine-6-sulfatase activity(GO:0008449) |
0.0 | 0.5 | GO:0038191 | neuropilin binding(GO:0038191) |
0.0 | 0.3 | GO:0008417 | fucosyltransferase activity(GO:0008417) |
0.0 | 0.1 | GO:0005008 | hepatocyte growth factor-activated receptor activity(GO:0005008) |
0.0 | 0.8 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.0 | 1.2 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.0 | 0.7 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.0 | 0.6 | GO:0005109 | frizzled binding(GO:0005109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.9 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 0.5 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.4 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 0.1 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.9 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII | Genes involved in CREB phosphorylation through the activation of CaMKII |
0.0 | 0.5 | REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION | Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion |
0.0 | 0.6 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.9 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 0.3 | REACTOME N GLYCAN ANTENNAE ELONGATION IN THE MEDIAL TRANS GOLGI | Genes involved in N-glycan antennae elongation in the medial/trans-Golgi |
0.0 | 0.4 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |