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12D miR HR13_24

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Results for Hoxc6

Z-value: 0.24

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Transcription factors associated with Hoxc6

Gene Symbol Gene ID Gene Info
ENSMUSG00000001661.4 homeobox C6

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Hoxc6mm10_v2_chr15_+_103009479_103009507-0.097.9e-01Click!

Activity profile of Hoxc6 motif

Sorted Z-values of Hoxc6 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_92485886 0.46 ENSMUST00000054599.7
small proline-rich protein 1A
chr14_+_75242287 0.37 ENSMUST00000022576.8
carboxypeptidase B2 (plasma)
chr3_-_113574242 0.34 ENSMUST00000142505.2
amylase 1, salivary
chr19_+_32619997 0.31 ENSMUST00000025833.6
3'-phosphoadenosine 5'-phosphosulfate synthase 2
chrX_+_164162167 0.24 ENSMUST00000131543.1
angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
chr10_+_112165676 0.23 ENSMUST00000170013.1
calcyphosphine 2
chrX_-_143933204 0.22 ENSMUST00000112851.1
ENSMUST00000112856.2
ENSMUST00000033642.3
doublecortin
chrX_-_143933089 0.19 ENSMUST00000087313.3
doublecortin
chr10_-_53647080 0.17 ENSMUST00000169866.1
family with sequence similarity 184, member A
chr8_-_109962127 0.16 ENSMUST00000001722.7
ENSMUST00000051430.6
MARVEL (membrane-associating) domain containing 3
chr7_+_73740277 0.16 ENSMUST00000107456.2
family with sequence similarity 174, member B
chr6_-_65144908 0.15 ENSMUST00000031982.4
hematopoietic prostaglandin D synthase
chr19_+_26748268 0.13 ENSMUST00000175791.1
ENSMUST00000176698.1
ENSMUST00000177252.1
ENSMUST00000176475.1
ENSMUST00000112637.2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr4_-_147642496 0.12 ENSMUST00000133006.1
ENSMUST00000037565.7
ENSMUST00000105720.1
RIKEN cDNA 2610305D13 gene
chr7_-_109731708 0.12 ENSMUST00000035372.1
achaete-scute complex homolog 3 (Drosophila)
chr6_-_30693676 0.12 ENSMUST00000169422.1
ENSMUST00000115131.1
ENSMUST00000115130.2
ENSMUST00000031810.8
centrosomal protein 41
chr5_+_24413406 0.12 ENSMUST00000049346.5
acid-sensing (proton-gated) ion channel 3
chr11_-_58733223 0.11 ENSMUST00000075607.2
olfactory receptor 317
chr1_+_88103229 0.11 ENSMUST00000113135.3
ENSMUST00000113138.1
UDP glucuronosyltransferase 1 family, polypeptide A6A
UDP glucuronosyltransferase 1 family, polypeptide A6B
chr3_-_113532288 0.10 ENSMUST00000132353.1
amylase 2a1
chr3_+_151437887 0.09 ENSMUST00000046977.7
EGF, latrophilin seven transmembrane domain containing 1
chr1_+_88134786 0.08 ENSMUST00000113134.1
ENSMUST00000140092.1
UDP glucuronosyltransferase 1 family, polypeptide A6A
chr5_+_17574268 0.08 ENSMUST00000030568.7
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr14_+_27000362 0.07 ENSMUST00000035433.8
homeobox gene expressed in ES cells
chr15_-_50889043 0.07 ENSMUST00000183997.1
ENSMUST00000183757.1
trichorhinophalangeal syndrome I (human)
chr18_+_37484955 0.07 ENSMUST00000053856.4
protocadherin beta 17
chr4_+_99656299 0.07 ENSMUST00000087285.3
forkhead box D3
chr7_-_34655500 0.06 ENSMUST00000032709.1
potassium channel tetramerisation domain containing 15
chr3_+_5218546 0.06 ENSMUST00000026284.6
zinc finger homeodomain 4
chr4_+_144893127 0.06 ENSMUST00000142808.1
dehydrogenase/reductase (SDR family) member 3
chr8_-_9976294 0.05 ENSMUST00000095476.4
ligase IV, DNA, ATP-dependent
chr10_+_23938572 0.05 ENSMUST00000079134.4
trace amine-associated receptor 2
chr4_+_33062999 0.05 ENSMUST00000108162.1
ENSMUST00000024035.2
gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
chr5_-_121191365 0.05 ENSMUST00000100770.2
ENSMUST00000054547.7
protein tyrosine phosphatase, non-receptor type 11
chr15_-_50889691 0.05 ENSMUST00000165201.2
ENSMUST00000184458.1
trichorhinophalangeal syndrome I (human)
chr7_+_5020376 0.04 ENSMUST00000076251.4
zinc finger protein 865
chr5_-_128953303 0.04 ENSMUST00000111346.1
RIMS binding protein 2
chr5_-_110046486 0.03 ENSMUST00000167969.1
predicted gene, 17655
chr3_+_5218516 0.03 ENSMUST00000175866.1
zinc finger homeodomain 4
chr10_-_61784014 0.03 ENSMUST00000020283.4
H2A histone family, member Y2
chr6_-_112288837 0.03 ENSMUST00000053559.4
RIKEN cDNA 5031434C07 gene
chr1_-_43827751 0.03 ENSMUST00000128261.1
ENSMUST00000126008.1
ENSMUST00000139451.1
UDP-glucuronate decarboxylase 1
chr7_-_16285454 0.03 ENSMUST00000174270.1
coiled-coil domain containing 9
chr7_-_24299310 0.03 ENSMUST00000145131.1
zinc finger protein 61
chr10_-_70655934 0.02 ENSMUST00000162144.1
ENSMUST00000162793.1
phytanoyl-CoA hydroxylase interacting protein-like
chr1_-_53706775 0.02 ENSMUST00000094964.5
dynein, axonemal, heavy chain 7A
chr15_+_100154379 0.02 ENSMUST00000023768.6
ENSMUST00000108971.2
DIP2 disco-interacting protein 2 homolog B (Drosophila)
chr11_+_109426223 0.02 ENSMUST00000103061.1
archaelysin family metallopeptidase 2
chr7_-_115846080 0.02 ENSMUST00000166207.1
SRY-box containing gene 6
chr8_-_84249701 0.01 ENSMUST00000019506.7
DNA segment, Chr 8, ERATO Doi 738, expressed
chr19_+_6364557 0.01 ENSMUST00000155973.1
splicing factor 1
chr2_+_150786735 0.01 ENSMUST00000045441.7
brain glycogen phosphorylase
chr4_-_36056726 0.00 ENSMUST00000108124.3
leucine rich repeat and Ig domain containing 2
chr1_-_22315792 0.00 ENSMUST00000164877.1
regulating synaptic membrane exocytosis 1
chr7_+_123123870 0.00 ENSMUST00000094053.5
trinucleotide repeat containing 6a
chr1_-_138175238 0.00 ENSMUST00000182536.1
protein tyrosine phosphatase, receptor type, C

Network of associatons between targets according to the STRING database.

First level regulatory network of Hoxc6

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0003331 regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331)
0.1 0.3 GO:0000103 sulfate assimilation(GO:0000103)
0.1 0.2 GO:0015827 angiotensin-mediated drinking behavior(GO:0003051) aromatic amino acid transport(GO:0015801) tryptophan transport(GO:0015827)
0.0 0.2 GO:2000255 negative regulation of male germ cell proliferation(GO:2000255)
0.0 0.1 GO:0050915 sensory perception of sour taste(GO:0050915)
0.0 0.4 GO:0048672 positive regulation of collateral sprouting(GO:0048672)
0.0 0.5 GO:0031424 keratinization(GO:0031424)
0.0 0.0 GO:2000847 negative regulation of corticosteroid hormone secretion(GO:2000847) negative regulation of glucocorticoid secretion(GO:2000850)
0.0 0.2 GO:0052696 flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697)
0.0 0.1 GO:0035887 aortic smooth muscle cell differentiation(GO:0035887)
0.0 0.2 GO:1902414 protein localization to cell junction(GO:1902414)
0.0 0.1 GO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching(GO:0060666)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 GO:0001533 cornified envelope(GO:0001533)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0030280 structural constituent of epidermis(GO:0030280)
0.0 0.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.0 0.2 GO:0004667 prostaglandin-D synthase activity(GO:0004667)
0.0 0.2 GO:0008241 peptidyl-dipeptidase activity(GO:0008241)
0.0 0.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.4 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.1 GO:0015280 ligand-gated sodium channel activity(GO:0015280)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES Genes involved in Cytosolic sulfonation of small molecules