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12D miR HR13_24

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Results for Sox13

Z-value: 0.22

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Transcription factors associated with Sox13

Gene Symbol Gene ID Gene Info
ENSMUSG00000070643.5 SRY (sex determining region Y)-box 13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Sox13mm10_v2_chr1_-_133424377_133424404-0.293.9e-01Click!

Activity profile of Sox13 motif

Sorted Z-values of Sox13 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_-_99438143 0.28 ENSMUST00000017743.2
keratin 20
chr7_+_96210107 0.16 ENSMUST00000138760.1
teneurin transmembrane protein 4
chr12_+_8012359 0.14 ENSMUST00000171239.1
apolipoprotein B
chr6_+_122513643 0.14 ENSMUST00000118626.1
microfibrillar associated protein 5
chr12_+_24708984 0.13 ENSMUST00000154588.1
ribonucleotide reductase M2
chr8_+_105427634 0.11 ENSMUST00000067305.6
leucine rich repeat containing 36
chr6_+_122513583 0.11 ENSMUST00000032210.7
ENSMUST00000148517.1
microfibrillar associated protein 5
chr15_-_34356421 0.09 ENSMUST00000179647.1
RIKEN cDNA 9430069I07 gene
chr6_-_56362356 0.09 ENSMUST00000044505.7
ENSMUST00000166102.1
ENSMUST00000164037.1
ENSMUST00000114327.2
phosphodiesterase 1C
chr10_+_53596936 0.06 ENSMUST00000020004.6
ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
chr3_-_75270073 0.06 ENSMUST00000039047.4
serine (or cysteine) peptidase inhibitor, clade I, member 2
chr3_+_34649987 0.05 ENSMUST00000099151.2
SRY-box containing gene 2
chr9_-_75597643 0.04 ENSMUST00000164100.1
tropomodulin 2
chr10_-_53647080 0.04 ENSMUST00000169866.1
family with sequence similarity 184, member A
chr2_+_176236860 0.03 ENSMUST00000166464.1
RIKEN cDNA 2210418O10 gene
chr7_-_121035096 0.03 ENSMUST00000065740.2
predicted gene 9905
chr1_+_135729147 0.03 ENSMUST00000027677.7
cysteine and glycine-rich protein 1
chr5_-_8367982 0.03 ENSMUST00000088761.4
ENSMUST00000115386.1
ENSMUST00000050166.7
ENSMUST00000046838.7
ENSMUST00000115388.2
ENSMUST00000088744.5
ENSMUST00000115385.1
a disintegrin and metallopeptidase domain 22
chr16_-_28929658 0.03 ENSMUST00000100023.1
Mab-21 domain containing 2
chr19_-_19001099 0.03 ENSMUST00000040153.8
ENSMUST00000112828.1
RAR-related orphan receptor beta
chr17_-_68004075 0.03 ENSMUST00000024840.5
Rho GTPase activating protein 28
chr3_-_95251148 0.02 ENSMUST00000125515.2
ENSMUST00000107195.2
BCL2/adenovirus E1B 19kD interacting protein like
chr10_-_116473418 0.02 ENSMUST00000087965.4
ENSMUST00000164271.1
potassium large conductance calcium-activated channel, subfamily M, beta member 4
chr4_+_103143052 0.01 ENSMUST00000106855.1
mesoderm induction early response 1 homolog (Xenopus laevis
chr3_+_60501252 0.01 ENSMUST00000099087.2
muscleblind-like 1 (Drosophila)
chr17_+_24886643 0.01 ENSMUST00000117890.1
ENSMUST00000168265.1
ENSMUST00000120943.1
ENSMUST00000068508.6
ENSMUST00000119829.1
splA/ryanodine receptor domain and SOCS box containing 3
chr5_-_24577467 0.01 ENSMUST00000030795.8
ATP-binding cassette, sub-family F (GCN20), member 2
chr13_-_55426769 0.01 ENSMUST00000170921.1
coagulation factor XII (Hageman factor)
chr2_+_70039114 0.01 ENSMUST00000060208.4
myosin IIIB
chr15_-_50890396 0.01 ENSMUST00000185183.1
trichorhinophalangeal syndrome I (human)
chr3_-_95251049 0.01 ENSMUST00000098871.4
BCL2/adenovirus E1B 19kD interacting protein like
chr7_+_82867327 0.01 ENSMUST00000082237.5
mex3 homolog B (C. elegans)
chr14_+_79515618 0.01 ENSMUST00000110835.1
E74-like factor 1
chr18_+_64887690 0.00 ENSMUST00000163516.1
neural precursor cell expressed, developmentally down-regulated gene 4-like
chr8_-_11008458 0.00 ENSMUST00000040514.6
insulin receptor substrate 2
chr1_-_93101825 0.00 ENSMUST00000112958.2
kinesin family member 1A
chr18_+_37355271 0.00 ENSMUST00000051163.1
protocadherin beta 8

Network of associatons between targets according to the STRING database.

First level regulatory network of Sox13

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0060912 cardiac cell fate specification(GO:0060912)
0.0 0.0 GO:0050973 detection of mechanical stimulus involved in equilibrioception(GO:0050973)
0.0 0.1 GO:0006642 triglyceride mobilization(GO:0006642)
0.0 0.3 GO:0045109 intermediate filament organization(GO:0045109)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005971 ribonucleoside-diphosphate reductase complex(GO:0005971)
0.0 0.2 GO:0001527 microfibril(GO:0001527) fibril(GO:0043205)
0.0 0.1 GO:0031983 vesicle lumen(GO:0031983)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0030023 extracellular matrix constituent conferring elasticity(GO:0030023)
0.0 0.1 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.1 GO:0035473 lipase binding(GO:0035473)
0.0 0.1 GO:0048101 calmodulin-dependent cyclic-nucleotide phosphodiesterase activity(GO:0004117) calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)