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12D miR HR13_24

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Results for AGGUAGU

Z-value: 0.36

Motif logo

miRNA associated with seed AGGUAGU

NamemiRBASE accession
MIMAT0000518
MIMAT0001081

Activity profile of AGGUAGU motif

Sorted Z-values of AGGUAGU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_-_96005872 0.48 ENSMUST00000013559.2
insulin-like growth factor 2 mRNA binding protein 1
chr10_-_45470201 0.40 ENSMUST00000079390.6
lin-28 homolog B (C. elegans)
chr6_-_145048809 0.34 ENSMUST00000032402.5
branched chain aminotransferase 1, cytosolic
chr11_+_94936224 0.30 ENSMUST00000001547.7
collagen, type I, alpha 1
chr9_+_111311674 0.29 ENSMUST00000078626.3
tetratricopeptide repeat and ankyrin repeat containing 1
chr6_-_49214954 0.29 ENSMUST00000031838.7
insulin-like growth factor 2 mRNA binding protein 3
chr6_+_4505493 0.29 ENSMUST00000031668.8
collagen, type I, alpha 2
chr9_+_72806874 0.28 ENSMUST00000055535.8
protogenin homolog (Gallus gallus)
chr1_+_45311538 0.24 ENSMUST00000087883.6
collagen, type III, alpha 1
chr8_+_117157972 0.19 ENSMUST00000064488.4
ENSMUST00000162997.1
giant axonal neuropathy
chr7_+_16130285 0.17 ENSMUST00000168693.1
solute carrier family 8 (sodium/calcium exchanger), member 2
chr1_+_86303221 0.16 ENSMUST00000113306.2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
chr10_-_120476469 0.16 ENSMUST00000072777.7
ENSMUST00000159699.1
high mobility group AT-hook 2
chr4_-_134018829 0.15 ENSMUST00000051674.2
lin-28 homolog A (C. elegans)
chr17_-_68004075 0.14 ENSMUST00000024840.5
Rho GTPase activating protein 28
chr6_+_4747306 0.14 ENSMUST00000175823.1
ENSMUST00000176204.1
ENSMUST00000166678.1
paternally expressed 10
chr17_+_27556613 0.11 ENSMUST00000117600.1
ENSMUST00000114888.3
high mobility group AT-hook 1
chrX_-_104201126 0.11 ENSMUST00000056502.6
ENSMUST00000118314.1
expressed sequence C77370
chrX_+_93654863 0.11 ENSMUST00000113933.2
phosphate cytidylyltransferase 1, choline, beta isoform
chr4_+_140700487 0.11 ENSMUST00000071169.2
regulator of chromosome condensation 2
chr7_+_44442398 0.10 ENSMUST00000058667.8
leucine rich repeat containing 4B
chr12_-_27342696 0.10 ENSMUST00000079063.5
SRY-box containing gene 11
chr3_+_145292472 0.10 ENSMUST00000029848.4
ENSMUST00000139001.1
collagen, type XXIV, alpha 1
chrX_+_36328353 0.09 ENSMUST00000016383.3
LON peptidase N-terminal domain and ring finger 3
chr8_-_84104773 0.09 ENSMUST00000041367.7
DDB1 and CUL4 associated factor 15
chr2_+_152081529 0.09 ENSMUST00000064061.3
scratch homolog 2, zinc finger protein (Drosophila)
chr7_+_120842824 0.09 ENSMUST00000047875.8
eukaryotic elongation factor-2 kinase
chrX_-_111697069 0.09 ENSMUST00000113422.2
ENSMUST00000038472.5
highly divergent homeobox
chr3_+_68468162 0.08 ENSMUST00000182532.1
schwannomin interacting protein 1
chr15_+_8109313 0.08 ENSMUST00000163765.1
nucleoporin 155
chr9_-_103364970 0.08 ENSMUST00000116517.2
carnitine deficiency-associated gene expressed in ventricle 3
chr13_+_96924674 0.08 ENSMUST00000171324.1
glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
chr15_+_55307743 0.07 ENSMUST00000023053.5
ENSMUST00000110221.2
ENSMUST00000110217.3
collagen, type XIV, alpha 1
chr15_+_102990576 0.06 ENSMUST00000001703.6
homeobox C8
chr11_+_96286623 0.06 ENSMUST00000049352.7
homeobox B7
chr16_-_46010212 0.06 ENSMUST00000130481.1
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr2_+_112379204 0.06 ENSMUST00000028552.3
katanin p80 subunit B like 1
chr6_-_52217505 0.06 ENSMUST00000048715.6
homeobox A7
chr10_-_123196916 0.05 ENSMUST00000020334.7
ubiquitin specific peptidase 15
chr9_+_52047150 0.05 ENSMUST00000163153.1
radixin
chr15_+_11064764 0.05 ENSMUST00000061318.7
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
chr1_-_168431695 0.05 ENSMUST00000176790.1
pre B cell leukemia homeobox 1
chr11_+_57801575 0.05 ENSMUST00000020826.5
SAP30-like
chr8_-_47352348 0.05 ENSMUST00000110367.2
storkhead box 2
chr11_+_44617310 0.05 ENSMUST00000081265.5
ENSMUST00000101326.3
ENSMUST00000109268.1
early B cell factor 1
chr11_-_76846968 0.04 ENSMUST00000021201.5
carboxypeptidase D
chr9_-_50617428 0.04 ENSMUST00000131351.1
ENSMUST00000171462.1
expressed sequence AU019823
chr3_-_92083132 0.04 ENSMUST00000058150.6
loricrin
chrX_+_110814390 0.04 ENSMUST00000078229.3
POU domain, class 3, transcription factor 4
chr15_+_6708372 0.04 ENSMUST00000061656.6
RPTOR independent companion of MTOR, complex 2
chr15_-_6874969 0.04 ENSMUST00000022746.6
ENSMUST00000176826.1
oncostatin M receptor
chr16_+_87698904 0.04 ENSMUST00000026703.5
BTB and CNC homology 1
chr8_+_23669653 0.04 ENSMUST00000042352.4
zinc finger, matrin type 4
chr3_-_10440054 0.04 ENSMUST00000099223.4
ENSMUST00000029047.6
sorting nexin 16
chr15_+_89253035 0.04 ENSMUST00000088788.3
protein phosphatase 6, regulatory subunit 2
chr2_+_156196642 0.04 ENSMUST00000037401.8
PHD finger protein 20
chr2_+_60209887 0.04 ENSMUST00000102748.4
ENSMUST00000102747.1
membrane-associated ring finger (C3HC4) 7
chr5_-_135545108 0.04 ENSMUST00000060311.8
huntingtin interacting protein 1
chr10_+_127677064 0.04 ENSMUST00000118612.1
ENSMUST00000048099.4
transmembrane protein 194
chr1_+_132007606 0.04 ENSMUST00000086556.5
ELK4, member of ETS oncogene family
chrX_-_48454152 0.03 ENSMUST00000114958.1
E74-like factor 4 (ets domain transcription factor)
chr19_+_30030439 0.03 ENSMUST00000025739.7
ubiquitin-like, containing PHD and RING finger domains 2
chrX_+_138914422 0.03 ENSMUST00000064937.7
ENSMUST00000113052.1
Nik related kinase
chr6_+_134920401 0.03 ENSMUST00000067327.4
ENSMUST00000003115.6
cyclin-dependent kinase inhibitor 1B
chr6_+_14901344 0.03 ENSMUST00000115477.1
forkhead box P2
chr2_+_31245801 0.03 ENSMUST00000000199.7
neuronal calcium sensor 1
chr3_+_103058302 0.03 ENSMUST00000029445.6
neuroblastoma ras oncogene
chr12_-_34528844 0.03 ENSMUST00000110819.2
histone deacetylase 9
chr11_+_54303798 0.03 ENSMUST00000093106.5
acyl-CoA synthetase long-chain family member 6
chr17_-_34603675 0.03 ENSMUST00000015622.7
ring finger protein 5
chr10_-_43540945 0.03 ENSMUST00000147196.1
ENSMUST00000019932.3
RIKEN cDNA 1700021F05 gene
chr2_+_28641227 0.03 ENSMUST00000028155.5
ENSMUST00000113869.1
ENSMUST00000113867.2
tuberous sclerosis 1
chr4_+_28813125 0.03 ENSMUST00000029964.5
ENSMUST00000080934.4
Eph receptor A7
chr2_+_36136384 0.02 ENSMUST00000028250.2
mitochondrial ribosome recycling factor
chr9_-_117252450 0.02 ENSMUST00000111773.3
ENSMUST00000068962.7
ENSMUST00000044901.7
RNA binding motif, single stranded interacting protein
chr13_+_35659856 0.02 ENSMUST00000075220.6
chromodomain protein, Y chromosome-like
chr2_-_93334467 0.02 ENSMUST00000111265.2
tetraspanin 18
chr14_-_33447142 0.02 ENSMUST00000111944.3
ENSMUST00000022504.5
ENSMUST00000111945.2
mitogen-activated protein kinase 8
chr1_+_59764264 0.02 ENSMUST00000087435.5
bone morphogenetic protein receptor, type II (serine/threonine kinase)
chr18_-_10181792 0.02 ENSMUST00000067947.5
Rho-associated coiled-coil containing protein kinase 1
chr15_-_76538728 0.02 ENSMUST00000023219.7
F-box and leucine-rich repeat protein 6
chr9_+_110132015 0.02 ENSMUST00000088716.5
ENSMUST00000111969.1
ENSMUST00000035057.7
ENSMUST00000111966.1
ENSMUST00000111968.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr16_-_5132458 0.02 ENSMUST00000035672.3
periplakin
chr9_+_65101453 0.01 ENSMUST00000077696.6
ENSMUST00000035499.4
ENSMUST00000166273.1
immunoglobulin superfamily, DCC subclass, member 4
chr8_+_14095849 0.01 ENSMUST00000152652.1
ENSMUST00000133298.1
discs, large (Drosophila) homolog-associated protein 2
chr11_+_96365752 0.01 ENSMUST00000019117.2
homeobox B1
chr7_-_141434532 0.01 ENSMUST00000133021.1
ENSMUST00000106007.3
ENSMUST00000150026.1
ENSMUST00000133206.2
solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr8_-_91313223 0.01 ENSMUST00000047783.7
Rpgrip1-like
chr8_-_110997764 0.01 ENSMUST00000040416.7
DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
chr4_+_6365650 0.01 ENSMUST00000029912.4
ENSMUST00000103008.5
ENSMUST00000175769.1
ENSMUST00000108374.1
ENSMUST00000140830.1
syndecan binding protein
chr6_+_70956456 0.01 ENSMUST00000163089.1
ENSMUST00000069634.5
forkhead box I3
chr1_+_121431049 0.01 ENSMUST00000036025.9
ENSMUST00000112621.1
coiled-coil domain containing 93
chr2_+_122738495 0.01 ENSMUST00000005954.8
biogenesis of organelles complex-1, subunit 6, pallidin
chr2_-_152398046 0.01 ENSMUST00000063332.8
ENSMUST00000182625.1
SRY-box containing gene 12
chr10_-_121476248 0.01 ENSMUST00000026902.7
Ras association (RalGDS/AF-6) domain family member 3
chr14_-_105176860 0.01 ENSMUST00000163545.1
RNA binding motif protein 26
chr10_-_61383523 0.01 ENSMUST00000020289.8
phosphatase domain containing, paladin 1
chr11_+_96292453 0.01 ENSMUST00000173432.1
homeobox B6
chr5_+_13399309 0.01 ENSMUST00000030714.7
ENSMUST00000141968.1
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chrX_-_7188713 0.01 ENSMUST00000004428.7
chloride channel 5
chr11_-_106216318 0.01 ENSMUST00000002043.3
coiled-coil domain containing 47
chr1_-_134955908 0.01 ENSMUST00000045665.6
ENSMUST00000086444.4
ENSMUST00000112163.1
protein phosphatase 1, regulatory (inhibitor) subunit 12B
chr6_-_52204415 0.00 ENSMUST00000048794.6
homeobox A5
chrX_-_133688978 0.00 ENSMUST00000149154.1
ENSMUST00000167944.1
protocadherin 19
chr2_+_154436437 0.00 ENSMUST00000109725.1
ENSMUST00000099178.3
ENSMUST00000045270.8
ENSMUST00000109724.1
core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
chr10_+_95940663 0.00 ENSMUST00000053484.6
early endosome antigen 1
chr18_-_61726302 0.00 ENSMUST00000062991.7
GrpE-like 2, mitochondrial
chr10_-_23349887 0.00 ENSMUST00000074366.6
ENSMUST00000092665.4
eyes absent 4 homolog (Drosophila)
chrX_-_162159717 0.00 ENSMUST00000087085.3
Nance-Horan syndrome (human)
chr17_+_33929514 0.00 ENSMUST00000047503.9
ral guanine nucleotide dissociation stimulator-like 2
chr14_-_124677089 0.00 ENSMUST00000095529.3
fibroblast growth factor 14

Network of associatons between targets according to the STRING database.

First level regulatory network of AGGUAGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.1 0.6 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 0.3 GO:0009098 branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)
0.0 0.2 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.3 GO:0001957 intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.0 0.1 GO:1904425 negative regulation of GTP binding(GO:1904425)
0.0 0.2 GO:1990034 calcium ion export from cell(GO:1990034)
0.0 0.1 GO:0036228 protein targeting to nuclear inner membrane(GO:0036228)
0.0 0.1 GO:0061386 closure of optic fissure(GO:0061386)
0.0 0.3 GO:0043589 skin morphogenesis(GO:0043589)
0.0 0.2 GO:0060613 fat pad development(GO:0060613)
0.0 0.1 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.1 GO:0051987 positive regulation of attachment of spindle microtubules to kinetochore(GO:0051987)
0.0 0.1 GO:0002121 inter-male aggressive behavior(GO:0002121)
0.0 0.0 GO:1902202 proteoglycan catabolic process(GO:0030167) regulation of hepatocyte growth factor receptor signaling pathway(GO:1902202)
0.0 0.1 GO:0035616 histone H2B conserved C-terminal lysine deubiquitination(GO:0035616)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0005584 collagen type I trimer(GO:0005584)
0.1 0.5 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.2 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.1 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.0 0.1 GO:0044611 nuclear pore inner ring(GO:0044611)
0.0 0.0 GO:0005900 oncostatin-M receptor complex(GO:0005900)
0.0 0.1 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0052656 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.8 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.0 0.1 GO:0004686 elongation factor-2 kinase activity(GO:0004686)
0.0 0.8 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.1 GO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity(GO:0003829)
0.0 0.1 GO:0004105 choline-phosphate cytidylyltransferase activity(GO:0004105)
0.0 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.0 GO:0030280 structural constituent of epidermis(GO:0030280)
0.0 0.0 GO:0004924 oncostatin-M receptor activity(GO:0004924)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 NABA COLLAGENS Genes encoding collagen proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.3 REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM Genes involved in Branched-chain amino acid catabolism
0.0 0.1 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection