Project

12D miR HR13_24

Navigation
Downloads

Results for Msx3

Z-value: 0.67

Motif logo

Transcription factors associated with Msx3

Gene Symbol Gene ID Gene Info
ENSMUSG00000025469.9 msh homeobox 3

Activity profile of Msx3 motif

Sorted Z-values of Msx3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_-_33087169 1.37 ENSMUST00000102810.3
GTPase activating RANGAP domain-like 3
chr9_+_72806874 1.18 ENSMUST00000055535.8
protogenin homolog (Gallus gallus)
chr18_+_4993795 1.16 ENSMUST00000153016.1
supervillin
chr2_-_33086366 1.13 ENSMUST00000049618.2
GTPase activating RANGAP domain-like 3
chr10_+_81257277 0.93 ENSMUST00000117488.1
ENSMUST00000105328.3
ENSMUST00000121205.1
megakaryocyte-associated tyrosine kinase
chr2_-_20943413 0.92 ENSMUST00000140230.1
Rho GTPase activating protein 21
chr8_+_57511833 0.91 ENSMUST00000067925.6
high mobility group box 2
chr15_+_82252397 0.87 ENSMUST00000136948.1
RIKEN cDNA 1500009C09 gene
chr12_-_71136611 0.54 ENSMUST00000021486.8
ENSMUST00000166120.1
translocase of inner mitochondrial membrane 9
chr8_-_41215146 0.53 ENSMUST00000034003.4
fibrinogen-like protein 1
chr7_+_101896817 0.51 ENSMUST00000143835.1
anaphase prompoting complex C subunit 15
chr11_+_53433299 0.51 ENSMUST00000018382.6
growth differentiation factor 9
chr17_+_49615104 0.51 ENSMUST00000162854.1
kinesin family member 6
chrM_+_9452 0.45 ENSMUST00000082411.1
mitochondrially encoded NADH dehydrogenase 3
chr2_-_174346712 0.44 ENSMUST00000168292.1
predicted gene, 20721
chr6_+_8948608 0.43 ENSMUST00000160300.1
neurexophilin 1
chr1_+_34439851 0.43 ENSMUST00000027303.7
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
chr2_-_45117349 0.43 ENSMUST00000176438.2
zinc finger E-box binding homeobox 2
chr5_+_104202609 0.42 ENSMUST00000066708.5
dentin matrix protein 1
chr9_+_44398176 0.39 ENSMUST00000165839.1
solute carrier family 37 (glucose-6-phosphate transporter), member 4
chr6_+_145934113 0.38 ENSMUST00000032383.7
sarcospan
chr13_-_58354862 0.38 ENSMUST00000043605.5
kinesin family member 27
chr9_+_35423582 0.36 ENSMUST00000154652.1
cell adhesion molecule-related/down-regulated by oncogenes
chr9_+_96258697 0.33 ENSMUST00000179416.1
transcription factor Dp 2
chr3_+_66985680 0.32 ENSMUST00000065047.6
arginine/serine-rich coiled-coil 1
chr1_-_158356258 0.30 ENSMUST00000004133.8
bone morphogenic protein/retinoic acid inducible neural-specific 2
chr12_+_71136848 0.30 ENSMUST00000149564.1
ENSMUST00000045907.8
RIKEN cDNA 2700049A03 gene
chr11_+_70018421 0.29 ENSMUST00000108588.1
discs, large homolog 4 (Drosophila)
chr17_+_56613392 0.28 ENSMUST00000080492.5
ribosomal protein L36
chr12_+_72441933 0.27 ENSMUST00000161284.1
leucine rich repeat containing 9
chr1_-_52190901 0.27 ENSMUST00000156887.1
ENSMUST00000129107.1
glutaminase
chrM_+_7005 0.24 ENSMUST00000082405.1
mitochondrially encoded cytochrome c oxidase II
chr1_-_172027269 0.24 ENSMUST00000027837.6
ENSMUST00000111264.1
vang-like 2 (van gogh, Drosophila)
chr7_+_101896340 0.24 ENSMUST00000035395.7
ENSMUST00000106973.1
ENSMUST00000144207.1
anaphase prompoting complex C subunit 15
chr12_+_72441852 0.23 ENSMUST00000162159.1
leucine rich repeat containing 9
chr5_+_88583527 0.22 ENSMUST00000031229.6
RUN and FYVE domain containing 3
chr5_+_92809372 0.22 ENSMUST00000113054.2
shroom family member 3
chr2_+_163658370 0.21 ENSMUST00000164399.1
ENSMUST00000064703.6
ENSMUST00000099105.2
ENSMUST00000152418.1
ENSMUST00000126182.1
ENSMUST00000131228.1
protein kinase inhibitor, gamma
chr10_+_88379127 0.20 ENSMUST00000127615.1
N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chrX_-_60893430 0.19 ENSMUST00000135107.2
SRY-box containing gene 3
chr11_+_116843278 0.19 ENSMUST00000106370.3
methyltransferase like 23
chr3_+_32515295 0.19 ENSMUST00000029203.7
zinc finger protein 639
chrX_+_16619698 0.19 ENSMUST00000026013.5
monoamine oxidase A
chr3_+_57425314 0.16 ENSMUST00000029377.7
transmembrane 4 superfamily member 4
chr3_+_66985700 0.15 ENSMUST00000046542.6
ENSMUST00000162693.1
arginine/serine-rich coiled-coil 1
chr3_+_66985647 0.15 ENSMUST00000162362.1
ENSMUST00000065074.7
arginine/serine-rich coiled-coil 1
chr10_-_85127977 0.14 ENSMUST00000050813.2
MTERF domain containing 3
chr3_+_94837533 0.14 ENSMUST00000107270.2
pogo transposable element with ZNF domain
chr5_+_14514918 0.14 ENSMUST00000030691.10
ENSMUST00000182407.1
piccolo (presynaptic cytomatrix protein)
chr15_+_38661904 0.12 ENSMUST00000022904.6
ATPase, H+ transporting, lysosomal V1 subunit C1
chr2_-_150255591 0.12 ENSMUST00000063463.5
predicted gene 21994
chr8_+_69659263 0.12 ENSMUST00000169125.1
zinc finger protein 964
chr4_-_58912678 0.11 ENSMUST00000144512.1
ENSMUST00000102889.3
ENSMUST00000055822.8
expressed sequence AI314180
chr11_+_109543694 0.11 ENSMUST00000106696.1
arylsulfatase G
chr7_+_103550368 0.11 ENSMUST00000106888.1
olfactory receptor 613
chr6_+_134640940 0.11 ENSMUST00000062755.8
loss of heterozygosity, 12, chromosomal region 1 homolog (human)
chr3_+_66985947 0.11 ENSMUST00000161726.1
ENSMUST00000160504.1
arginine/serine-rich coiled-coil 1
chr3_-_116253467 0.10 ENSMUST00000090473.5
G-protein coupled receptor 88
chr10_+_88379217 0.09 ENSMUST00000130301.1
ENSMUST00000020251.8
N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
chr9_+_100597686 0.07 ENSMUST00000124487.1
stromal antigen 1
chrM_+_9870 0.07 ENSMUST00000084013.1
mitochondrially encoded NADH dehydrogenase 4L
chr10_-_116896879 0.05 ENSMUST00000048229.7
myelin regulatory factor-like
chr7_-_127895578 0.05 ENSMUST00000033074.6
vitamin K epoxide reductase complex, subunit 1
chr3_+_94837702 0.05 ENSMUST00000107266.1
ENSMUST00000042402.5
ENSMUST00000107269.1
pogo transposable element with ZNF domain
chrX_+_101449078 0.04 ENSMUST00000033674.5
integrin beta 1 binding protein 2
chr8_-_24725762 0.04 ENSMUST00000171438.1
ENSMUST00000171611.1
ENSMUST00000033958.7
a disintegrin and metallopeptidase domain 3 (cyritestin)
chr3_+_83055516 0.02 ENSMUST00000150268.1
ENSMUST00000122128.1
pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
chr8_+_72219726 0.01 ENSMUST00000003123.8
family with sequence similarity 32, member A
chrX_+_9885622 0.01 ENSMUST00000067529.2
ENSMUST00000086165.3
synaptotagmin-like 5

Network of associatons between targets according to the STRING database.

First level regulatory network of Msx3

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0051684 maintenance of Golgi location(GO:0051684)
0.1 0.4 GO:0070173 regulation of enamel mineralization(GO:0070173)
0.1 0.9 GO:0045654 positive regulation of megakaryocyte differentiation(GO:0045654)
0.1 0.5 GO:2000870 regulation of progesterone secretion(GO:2000870)
0.1 0.5 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 0.3 GO:0016256 N-glycan processing to lysosome(GO:0016256)
0.1 0.2 GO:0060488 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.1 0.4 GO:1902748 positive regulation of lens fiber cell differentiation(GO:1902748)
0.1 0.4 GO:0035166 hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760) post-embryonic hemopoiesis(GO:0035166)
0.1 0.8 GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.0 0.1 GO:0098928 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.4 GO:0014816 skeletal muscle satellite cell differentiation(GO:0014816)
0.0 0.3 GO:0006543 glutamine catabolic process(GO:0006543)
0.0 0.2 GO:0042420 dopamine catabolic process(GO:0042420)
0.0 0.1 GO:0061743 motor learning(GO:0061743)
0.0 0.5 GO:0035634 response to stilbenoid(GO:0035634) response to phenylpropanoid(GO:0080184)
0.0 0.3 GO:0098953 receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628)
0.0 0.2 GO:0043922 negative regulation by host of viral transcription(GO:0043922)
0.0 0.8 GO:0046677 response to antibiotic(GO:0046677)
0.0 0.4 GO:0003351 epithelial cilium movement(GO:0003351)
0.0 0.2 GO:0051382 kinetochore assembly(GO:0051382)
0.0 0.2 GO:2000480 negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.0 0.2 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.9 GO:0038083 peptidyl-tyrosine autophosphorylation(GO:0038083)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.5 GO:0042719 mitochondrial intermembrane space protein transporter complex(GO:0042719)
0.1 0.2 GO:0060187 cell pole(GO:0060187)
0.0 0.1 GO:0044317 rod spherule(GO:0044317)
0.0 0.1 GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221)
0.0 0.8 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.4 GO:0016010 dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.0 0.5 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 1.2 GO:0043034 costamere(GO:0043034)
0.0 0.3 GO:0044224 juxtaparanode region of axon(GO:0044224)
0.0 0.2 GO:0071437 invadopodium(GO:0071437)
0.0 0.2 GO:0005751 mitochondrial respiratory chain complex IV(GO:0005751)
0.0 0.5 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0030519 snoRNP binding(GO:0030519)
0.1 0.9 GO:0050786 RAGE receptor binding(GO:0050786)
0.1 0.4 GO:0061513 hexose phosphate transmembrane transporter activity(GO:0015119) organophosphate:inorganic phosphate antiporter activity(GO:0015315) hexose-phosphate:inorganic phosphate antiporter activity(GO:0015526) glucose 6-phosphate:inorganic phosphate antiporter activity(GO:0061513)
0.1 0.3 GO:0003976 UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity(GO:0003976)
0.0 0.3 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.3 GO:0031812 G-protein coupled nucleotide receptor binding(GO:0031811) P2Y1 nucleotide receptor binding(GO:0031812)
0.0 0.2 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.5 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.9 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.1 GO:0005522 profilin binding(GO:0005522)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.4 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 1.2 PID AR PATHWAY Coregulation of Androgen receptor activity

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.3 REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Glutamate Neurotransmitter Release Cycle
0.0 0.2 REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Norepinephrine Neurotransmitter Release Cycle
0.0 0.1 REACTOME THE ACTIVATION OF ARYLSULFATASES Genes involved in The activation of arylsulfatases
0.0 0.5 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import