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12D miR HR13_24

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Results for Msx2_Hoxd4

Z-value: 0.31

Motif logo

Transcription factors associated with Msx2_Hoxd4

Gene Symbol Gene ID Gene Info
ENSMUSG00000021469.8 msh homeobox 2

Activity profile of Msx2_Hoxd4 motif

Sorted Z-values of Msx2_Hoxd4 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_62765618 0.35 ENSMUST00000159470.1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr6_+_41538218 0.30 ENSMUST00000103291.1
T cell receptor beta, constant region 1
chr13_-_3945349 0.24 ENSMUST00000058610.7
urocortin 3
chrX_-_162964557 0.23 ENSMUST00000038769.2
S100 calcium binding protein G
chr6_+_29853746 0.23 ENSMUST00000064872.6
ENSMUST00000152581.1
ENSMUST00000176265.1
ENSMUST00000154079.1
S-adenosylhomocysteine hydrolase-like 2
chr5_+_20702129 0.23 ENSMUST00000101556.4
membrane associated guanylate kinase, WW and PDZ domain containing 2
chr5_+_87925579 0.18 ENSMUST00000001667.6
ENSMUST00000113267.1
casein kappa
chr6_-_124779686 0.18 ENSMUST00000147669.1
ENSMUST00000128697.1
ENSMUST00000032218.3
ENSMUST00000112475.2
leucine rich repeat containing 23
chr7_-_115824699 0.17 ENSMUST00000169129.1
SRY-box containing gene 6
chr1_+_136683375 0.17 ENSMUST00000181524.1
predicted gene, 19705
chr9_-_77544829 0.16 ENSMUST00000183734.1
leucine rich repeat containing 1
chr16_-_44016387 0.16 ENSMUST00000036174.3
GRAM domain containing 1C
chr1_+_157526127 0.13 ENSMUST00000111700.1
SEC16 homolog B (S. cerevisiae)
chr4_-_49549523 0.13 ENSMUST00000029987.9
aldolase B, fructose-bisphosphate
chrX_-_143933089 0.12 ENSMUST00000087313.3
doublecortin
chr1_-_190170178 0.11 ENSMUST00000177288.1
prospero-related homeobox 1
chr4_-_129261394 0.11 ENSMUST00000145261.1
expressed sequence C77080
chr7_+_126950518 0.11 ENSMUST00000106335.1
ENSMUST00000146017.1
seizure related 6 homolog like 2
chr9_+_64235201 0.10 ENSMUST00000039011.3
ubiquitin carboxyl-terminal esterase L4
chr5_-_87569023 0.10 ENSMUST00000113314.2
sulfotransferase family 1D, member 1
chr15_-_58364148 0.10 ENSMUST00000068515.7
annexin A13
chr13_-_102905740 0.10 ENSMUST00000167462.1
microtubule associated serine/threonine kinase family member 4
chr13_+_23555023 0.10 ENSMUST00000045301.6
histone cluster 1, H1d
chr4_-_82850721 0.09 ENSMUST00000139401.1
zinc finger, DHHC domain containing 21
chr2_-_63184253 0.09 ENSMUST00000075052.3
ENSMUST00000112454.1
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr9_-_77544870 0.09 ENSMUST00000183873.1
leucine rich repeat containing 1
chr3_+_40800778 0.09 ENSMUST00000169566.1
polo-like kinase 4
chr1_-_172632931 0.09 ENSMUST00000027826.5
dual specificity phosphatase 23
chr4_-_62519885 0.09 ENSMUST00000107444.1
ENSMUST00000030090.3
aminolevulinate, delta-, dehydratase
chr10_+_39612934 0.08 ENSMUST00000019987.6
TRAF3 interacting protein 2
chrX_+_9846945 0.08 ENSMUST00000044987.1
RIKEN cDNA 1700054O13 gene
chr1_-_168432270 0.08 ENSMUST00000072863.4
pre B cell leukemia homeobox 1
chr5_+_87925624 0.08 ENSMUST00000113271.2
casein kappa
chrX_-_143933204 0.08 ENSMUST00000112851.1
ENSMUST00000112856.2
ENSMUST00000033642.3
doublecortin
chrX_+_101640056 0.08 ENSMUST00000119299.1
ENSMUST00000044475.4
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chr2_+_4017727 0.08 ENSMUST00000177457.1
FERM domain containing 4A
chr9_-_40962333 0.08 ENSMUST00000160120.1
RIKEN cDNA 4931429I11 gene
chr3_-_146495115 0.07 ENSMUST00000093951.2
spermatogenesis associated 1
chr6_-_50654438 0.07 ENSMUST00000031853.7
neuropeptide VF precursor
chr13_-_102906046 0.07 ENSMUST00000171791.1
microtubule associated serine/threonine kinase family member 4
chr2_+_125136692 0.07 ENSMUST00000099452.2
cortexin 2
chr3_-_85741389 0.07 ENSMUST00000094148.4
family with sequence similarity 160, member A1
chr3_+_106113229 0.07 ENSMUST00000079132.5
ENSMUST00000139086.1
chitinase, acidic
chr15_-_50890396 0.07 ENSMUST00000185183.1
trichorhinophalangeal syndrome I (human)
chr7_+_126950837 0.07 ENSMUST00000106332.1
seizure related 6 homolog like 2
chr17_-_46327949 0.07 ENSMUST00000047970.7
ATP-binding cassette, sub-family C (CFTR/MRP), member 10
chr17_-_35046539 0.07 ENSMUST00000007250.7
mutS homolog 5 (E. coli)
chr14_-_88471396 0.07 ENSMUST00000061628.5
protocadherin 20
chr13_+_40859768 0.07 ENSMUST00000110191.2
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
chr7_+_126950687 0.07 ENSMUST00000106333.1
seizure related 6 homolog like 2
chr14_+_54259227 0.07 ENSMUST00000041197.7
abhydrolase domain containing 4
chr3_-_144975011 0.06 ENSMUST00000075496.4
ENSMUST00000029923.6
chloride channel calcium activated 6
chr8_-_120228221 0.06 ENSMUST00000183235.1
RIKEN cDNA A330074K22 gene
chr11_+_103133303 0.06 ENSMUST00000107037.1
hexamethylene bis-acetamide inducible 2
chr1_+_157458554 0.06 ENSMUST00000046743.4
ENSMUST00000119891.1
cDNA sequence BC026585
chr6_+_15196949 0.06 ENSMUST00000151301.1
ENSMUST00000131414.1
ENSMUST00000140557.1
ENSMUST00000115469.1
forkhead box P2
chr11_-_109472611 0.06 ENSMUST00000168740.1
solute carrier family 16 (monocarboxylic acid transporters), member 6
chr10_+_34483400 0.06 ENSMUST00000019913.7
ENSMUST00000170771.1
fyn-related kinase
chr5_-_62766153 0.06 ENSMUST00000076623.4
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr9_+_78051938 0.05 ENSMUST00000024104.7
glial cells missing homolog 1 (Drosophila)
chr12_-_76177251 0.05 ENSMUST00000101291.3
ENSMUST00000076634.4
estrogen receptor 2 (beta)
chr10_-_24092320 0.05 ENSMUST00000092654.2
trace amine-associated receptor 8B
chr17_-_90088343 0.05 ENSMUST00000173917.1
neurexin I
chr1_+_33908172 0.05 ENSMUST00000182513.1
ENSMUST00000183034.1
dystonin
chr8_-_8639363 0.05 ENSMUST00000152698.1
ephrin B2
chr17_+_17402672 0.05 ENSMUST00000115576.2
limb expression 1 homolog (chicken)
chr4_-_40722307 0.05 ENSMUST00000181475.1
predicted gene 6297
chr8_-_61591130 0.05 ENSMUST00000135439.1
ENSMUST00000121200.1
palladin, cytoskeletal associated protein
chr7_-_73537621 0.05 ENSMUST00000172704.1
chromodomain helicase DNA binding protein 2
chrX_+_159303266 0.05 ENSMUST00000112491.1
ribosomal protein S6 kinase polypeptide 3
chr13_+_23695791 0.04 ENSMUST00000041052.2
histone cluster 1, H1t
chr4_-_73790602 0.04 ENSMUST00000058292.6
ENSMUST00000102837.2
RAS and EF hand domain containing
chr11_+_58786139 0.04 ENSMUST00000076393.3
olfactory receptor 314
chr3_+_138065052 0.04 ENSMUST00000163080.2
RIKEN cDNA 1110002E22 gene
chr15_-_37459327 0.04 ENSMUST00000119730.1
ENSMUST00000120746.1
neurocalcin delta
chr9_-_50739365 0.04 ENSMUST00000117093.1
ENSMUST00000121634.1
DIX domain containing 1
chr1_-_144545320 0.04 ENSMUST00000184189.1
regulator of G-protein signalling 21
chr4_+_101507947 0.04 ENSMUST00000149047.1
ENSMUST00000106929.3
DnaJ (Hsp40) homolog, subfamily C, member 6
chr18_-_3281752 0.04 ENSMUST00000140332.1
ENSMUST00000147138.1
cAMP responsive element modulator
chrX_+_56454871 0.04 ENSMUST00000039374.2
ENSMUST00000101553.2
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
chr13_+_76098734 0.04 ENSMUST00000091466.3
tetratricopeptide repeat domain 37
chr3_+_52268337 0.04 ENSMUST00000053764.5
forkhead box O1
chr17_-_25785324 0.04 ENSMUST00000150324.1
hydroxyacylglutathione hydrolase-like
chr1_+_88306731 0.04 ENSMUST00000040210.7
transient receptor potential cation channel, subfamily M, member 8
chr3_-_79145875 0.04 ENSMUST00000118340.1
Rap guanine nucleotide exchange factor (GEF) 2
chr1_+_60908993 0.03 ENSMUST00000027164.2
cytotoxic T-lymphocyte-associated protein 4
chr1_+_72284367 0.03 ENSMUST00000027380.5
ENSMUST00000141783.1
transmembrane protein 169
chr19_+_26749726 0.03 ENSMUST00000175842.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr17_+_79626669 0.03 ENSMUST00000086570.1
RIKEN cDNA 4921513D11 gene
chr6_-_13871477 0.03 ENSMUST00000139231.1
RIKEN cDNA 2610001J05 gene
chr12_+_52516077 0.03 ENSMUST00000110725.1
Rho GTPase activating protein 5
chr13_+_75967704 0.03 ENSMUST00000022081.1
spermatogenesis associated 9
chr6_+_136518820 0.03 ENSMUST00000032335.6
activating transcription factor 7 interacting protein
chr13_+_23544052 0.03 ENSMUST00000075558.2
histone cluster 1, H3f
chr10_+_75037066 0.03 ENSMUST00000147802.1
ENSMUST00000020391.5
RAB36, member RAS oncogene family
chr6_-_131316398 0.03 ENSMUST00000121078.1
serine/threonine/tyrosine kinase 1
chr7_-_73541738 0.03 ENSMUST00000169922.2
chromodomain helicase DNA binding protein 2
chr19_+_31868754 0.03 ENSMUST00000075838.5
APOBEC1 complementation factor
chr14_-_36919314 0.03 ENSMUST00000182797.1
coiled-coil serine rich 2
chr18_-_3281712 0.03 ENSMUST00000182204.1
ENSMUST00000154705.1
ENSMUST00000182833.1
ENSMUST00000151084.1
cAMP responsive element modulator
chr6_+_37870786 0.03 ENSMUST00000120428.1
ENSMUST00000031859.7
tripartite motif-containing 24
chr15_-_37458523 0.03 ENSMUST00000116445.2
neurocalcin delta
chr6_+_124304646 0.03 ENSMUST00000112541.2
ENSMUST00000032234.2
CD163 antigen
chr9_-_71163224 0.03 ENSMUST00000074465.2
aquaporin 9
chr2_+_180710117 0.03 ENSMUST00000029090.2
GID complex subunit 8 homolog (S. cerevisiae)
chr4_-_148159838 0.02 ENSMUST00000151127.1
ENSMUST00000105705.2
F-box protein 44
chr1_-_133661318 0.02 ENSMUST00000179598.1
ENSMUST00000027736.6
zinc finger, BED domain containing 6
zinc finger CCCH type containing 11A
chr6_+_13871517 0.02 ENSMUST00000181090.1
ENSMUST00000181225.1
RIKEN cDNA 1110019D14 gene
chr2_-_63184170 0.02 ENSMUST00000112452.1
potassium voltage-gated channel, subfamily H (eag-related), member 7
chrX_+_159708593 0.02 ENSMUST00000080394.6
SH3-domain kinase binding protein 1
chr9_-_55919605 0.02 ENSMUST00000037408.8
S phase cyclin A-associated protein in the ER
chr5_-_146220901 0.02 ENSMUST00000169407.2
ENSMUST00000161331.1
ENSMUST00000159074.2
ENSMUST00000067837.3
ring finger protein (C3H2C3 type) 6
chr4_+_101507855 0.02 ENSMUST00000038207.5
DnaJ (Hsp40) homolog, subfamily C, member 6
chr2_+_80617045 0.02 ENSMUST00000028384.4
dual specificity phosphatase 19
chr1_-_72284248 0.02 ENSMUST00000097698.4
ENSMUST00000027381.6
peroxisomal trans-2-enoyl-CoA reductase
chr1_+_165788746 0.02 ENSMUST00000161559.2
CD247 antigen
chr19_-_39740999 0.02 ENSMUST00000099472.3
cytochrome P450, family 2, subfamily c, polypeptide 68
chr10_-_25536114 0.02 ENSMUST00000179685.1
small leucine-rich protein 1
chr7_-_34654342 0.02 ENSMUST00000108069.1
potassium channel tetramerisation domain containing 15
chr11_+_103133333 0.02 ENSMUST00000124928.1
ENSMUST00000062530.4
hexamethylene bis-acetamide inducible 2
chr7_-_101845300 0.02 ENSMUST00000094141.5
folate receptor 2 (fetal)
chr15_-_101786458 0.02 ENSMUST00000071104.4
keratin 72
chr9_-_107770945 0.02 ENSMUST00000183248.1
ENSMUST00000182022.1
ENSMUST00000035199.6
ENSMUST00000182659.1
RNA binding motif protein 5
chr5_+_65348386 0.02 ENSMUST00000031096.7
klotho beta
chr18_+_37513652 0.02 ENSMUST00000061405.4
protocadherin beta 21
chr3_+_84952146 0.02 ENSMUST00000029727.7
F-box and WD-40 domain protein 7
chr1_+_165788681 0.02 ENSMUST00000161971.1
ENSMUST00000178336.1
ENSMUST00000005907.5
ENSMUST00000027849.4
CD247 antigen
chr1_-_132390301 0.02 ENSMUST00000132435.1
transmembrane and coiled-coil domains 2
chr5_-_107875035 0.02 ENSMUST00000138111.1
ENSMUST00000112642.1
ecotropic viral integration site 5
chr4_-_3872105 0.02 ENSMUST00000105158.1
Moloney sarcoma oncogene
chrX_-_103981242 0.02 ENSMUST00000121153.1
ENSMUST00000070705.4
ring finger protein, LIM domain interacting
chr2_+_20737306 0.02 ENSMUST00000114606.1
ENSMUST00000114608.1
enhancer trap locus 4
chr10_+_128303322 0.02 ENSMUST00000005825.6
PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)
chr7_+_65693447 0.01 ENSMUST00000143508.1
TM2 domain containing 3
chr19_+_46396885 0.01 ENSMUST00000039922.6
ENSMUST00000111867.2
ENSMUST00000120778.1
suppressor of fused homolog (Drosophila)
chr12_-_108179210 0.01 ENSMUST00000125916.2
ENSMUST00000109879.1
SET domain containing 3
chr7_+_123123870 0.01 ENSMUST00000094053.5
trinucleotide repeat containing 6a
chr4_-_148160031 0.01 ENSMUST00000057907.3
F-box protein 44
chr11_-_99322943 0.01 ENSMUST00000038004.2
keratin 25
chr4_+_3940747 0.01 ENSMUST00000119403.1
coiled-coil-helix-coiled-coil-helix domain containing 7
chr2_-_33428222 0.01 ENSMUST00000091037.2
zinc finger and BTB domain containing 34
chr12_-_85374696 0.01 ENSMUST00000040766.7
transmembrane emp24-like trafficking protein 10 (yeast)
chr10_-_13324160 0.01 ENSMUST00000105545.4
phosphatase and actin regulator 2
chrX_-_8132770 0.01 ENSMUST00000130832.1
ENSMUST00000033506.6
ENSMUST00000115623.1
ENSMUST00000153839.1
WD repeat domain 13
chr10_+_127421208 0.01 ENSMUST00000168780.1
R3H domain containing 2
chr11_+_95010277 0.01 ENSMUST00000124735.1
sterile alpha motif domain containing 14
chr5_-_23616528 0.01 ENSMUST00000088392.4
serine/arginine-rich protein specific kinase 2
chr7_-_114117761 0.01 ENSMUST00000069449.5
related RAS viral (r-ras) oncogene homolog 2
chr6_-_23650298 0.01 ENSMUST00000063548.3
ring finger protein 133
chrX_-_150814265 0.01 ENSMUST00000026302.6
ENSMUST00000129768.1
ENSMUST00000112699.2
melanoma antigen, family D, 2
chr15_+_41830921 0.01 ENSMUST00000166917.1
oxidation resistance 1
chr18_+_68337504 0.01 ENSMUST00000172148.1
melanocortin 5 receptor
chr11_+_78465697 0.01 ENSMUST00000001126.3
solute carrier family 46, member 1
chr10_-_24101951 0.01 ENSMUST00000170267.1
trace amine-associated receptor 8C
chr6_+_29361410 0.01 ENSMUST00000156163.1
calumenin
chr11_+_76904513 0.01 ENSMUST00000072633.3
transmembrane and immunoglobulin domain containing 1
chr6_-_23650206 0.01 ENSMUST00000115354.1
ring finger protein 133
chr7_-_84679346 0.01 ENSMUST00000069537.2
ENSMUST00000178385.1
zinc finger, AN1-type domain 6
chr1_+_53061637 0.01 ENSMUST00000027269.5
myostatin
chr1_+_180109192 0.01 ENSMUST00000143176.1
ENSMUST00000135056.1
CDC42 binding protein kinase alpha
chr4_-_141078302 0.01 ENSMUST00000030760.8
NECAP endocytosis associated 2
chr12_-_108179237 0.01 ENSMUST00000071095.7
SET domain containing 3
chr7_+_144838590 0.01 ENSMUST00000105898.1
fibroblast growth factor 3
chr4_-_119492563 0.01 ENSMUST00000049994.7
ribosomal modification protein rimK-like family member A
chr7_+_96522342 0.00 ENSMUST00000129737.1
teneurin transmembrane protein 4
chr5_+_48242549 0.00 ENSMUST00000172493.1
slit homolog 2 (Drosophila)
chr19_-_55241236 0.00 ENSMUST00000069183.6
guanylate cyclase 2g
chr2_+_35622010 0.00 ENSMUST00000091010.5
disabled 2 interacting protein
chr2_-_60125651 0.00 ENSMUST00000112550.1
bromodomain adjacent to zinc finger domain, 2B
chr7_-_29906524 0.00 ENSMUST00000159920.1
ENSMUST00000162592.1
zinc finger protein 27
chr11_+_98798653 0.00 ENSMUST00000037930.6
male-specific lethal 1 homolog (Drosophila)
chr12_+_36314160 0.00 ENSMUST00000041407.5
sclerostin domain containing 1
chr17_+_46161021 0.00 ENSMUST00000024748.7
ENSMUST00000172170.1
GTP binding protein 2
chr10_-_14718191 0.00 ENSMUST00000020016.4
gap junction protein, epsilon 1

Network of associatons between targets according to the STRING database.

First level regulatory network of Msx2_Hoxd4

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0061625 fructose catabolic process(GO:0006001) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) glycolytic process through fructose-1-phosphate(GO:0061625)
0.0 0.3 GO:0097118 neuroligin clustering involved in postsynaptic membrane assembly(GO:0097118)
0.0 0.2 GO:0033353 S-adenosylmethionine cycle(GO:0033353)
0.0 0.1 GO:0090526 regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.0 0.1 GO:0000103 sulfate assimilation(GO:0000103)
0.0 0.1 GO:0060743 epithelial cell maturation involved in prostate gland development(GO:0060743)
0.0 0.1 GO:2000979 hepatocyte cell migration(GO:0002194) branching involved in pancreas morphogenesis(GO:0061114) acinar cell differentiation(GO:0090425) positive regulation of forebrain neuron differentiation(GO:2000979)
0.0 0.2 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.1 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.1 GO:0048208 vesicle targeting, rough ER to cis-Golgi(GO:0048207) COPII vesicle coating(GO:0048208)
0.0 0.1 GO:0060800 regulation of cell differentiation involved in embryonic placenta development(GO:0060800)
0.0 0.1 GO:0046601 positive regulation of centriole replication(GO:0046601) de novo centriole assembly(GO:0098535)
0.0 0.0 GO:2000670 positive regulation of dendritic cell apoptotic process(GO:2000670)
0.0 0.1 GO:0036438 maintenance of lens transparency(GO:0036438)
0.0 0.2 GO:0048672 positive regulation of collateral sprouting(GO:0048672)
0.0 0.1 GO:0032277 negative regulation of gonadotropin secretion(GO:0032277)
0.0 0.1 GO:0072318 clathrin coat disassembly(GO:0072318)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0030868 smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
0.0 0.3 GO:0042571 immunoglobulin complex, circulating(GO:0042571)
0.0 0.3 GO:0036057 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0 0.1 GO:0098536 deuterosome(GO:0098536)
0.0 0.0 GO:0055087 Ski complex(GO:0055087)
0.0 0.2 GO:0043196 varicosity(GO:0043196)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0005499 vitamin D binding(GO:0005499)
0.0 0.2 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 0.2 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.2 GO:0051429 corticotropin-releasing hormone receptor binding(GO:0051429)
0.0 0.1 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.0 0.1 GO:0004062 aryl sulfotransferase activity(GO:0004062)
0.0 0.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.1 GO:0038052 RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding(GO:0038052)
0.0 0.1 GO:0008109 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity(GO:0008109)
0.0 0.2 GO:0034987 immunoglobulin receptor binding(GO:0034987)
0.0 0.1 GO:1901611 phosphatidylglycerol binding(GO:1901611)
0.0 0.1 GO:0097322 7SK snRNA binding(GO:0097322)