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12D miR HR13_24

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Results for Hoxa3

Z-value: 0.20

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Transcription factors associated with Hoxa3

Gene Symbol Gene ID Gene Info
ENSMUSG00000079560.7 homeobox A3

Activity profile of Hoxa3 motif

Sorted Z-values of Hoxa3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr16_-_45724600 0.38 ENSMUST00000096057.4
transgelin 3
chr14_+_64589802 0.33 ENSMUST00000180610.1
RIKEN cDNA A930011O12 gene
chr2_+_173153048 0.25 ENSMUST00000029017.5
phosphoenolpyruvate carboxykinase 1, cytosolic
chr3_-_72967854 0.15 ENSMUST00000167334.1
sucrase isomaltase (alpha-glucosidase)
chr19_-_55241236 0.15 ENSMUST00000069183.6
guanylate cyclase 2g
chr3_-_86548268 0.14 ENSMUST00000077524.3
mab-21-like 2 (C. elegans)
chr6_+_8948608 0.14 ENSMUST00000160300.1
neurexophilin 1
chr2_-_17460610 0.12 ENSMUST00000145492.1
nebulette
chr5_+_104202609 0.12 ENSMUST00000066708.5
dentin matrix protein 1
chr12_+_71170589 0.11 ENSMUST00000129376.1
RIKEN cDNA 2700049A03 gene
chr6_+_63255971 0.11 ENSMUST00000159561.1
ENSMUST00000095852.3
glutamate receptor, ionotropic, delta 2
chr17_-_70853482 0.10 ENSMUST00000118283.1
TGFB-induced factor homeobox 1
chr7_-_45103747 0.09 ENSMUST00000003512.7
Fc receptor, IgG, alpha chain transporter
chr4_+_108719649 0.09 ENSMUST00000178992.1
RIKEN cDNA 3110021N24 gene
chr7_-_38019505 0.08 ENSMUST00000085513.4
URI1, prefoldin-like chaperone
chr10_+_40349265 0.08 ENSMUST00000044672.4
ENSMUST00000095743.2
cyclin-dependent kinase 19
chr6_-_136781718 0.07 ENSMUST00000078095.6
ENSMUST00000032338.7
guanylate cyclase 2c
chr2_-_164171113 0.07 ENSMUST00000045196.3
K+ voltage-gated channel, subfamily S, 1
chr2_+_116067213 0.07 ENSMUST00000152412.1
RIKEN cDNA G630016G05 gene
chr12_+_59013379 0.06 ENSMUST00000021379.7
gem (nuclear organelle) associated protein 2
chr16_-_92400067 0.06 ENSMUST00000023672.8
regulator of calcineurin 1
chr10_+_37139558 0.05 ENSMUST00000062667.3
RIKEN cDNA 5930403N24 gene
chr5_+_138187485 0.05 ENSMUST00000110934.2
canopy 4 homolog (zebrafish)
chr11_-_100762928 0.04 ENSMUST00000107360.2
ENSMUST00000055083.3
hypocretin
chrX_+_16619698 0.04 ENSMUST00000026013.5
monoamine oxidase A
chr10_-_37138863 0.04 ENSMUST00000092584.5
myristoylated alanine rich protein kinase C substrate
chr1_-_172027269 0.03 ENSMUST00000027837.6
ENSMUST00000111264.1
vang-like 2 (van gogh, Drosophila)
chr2_+_36230426 0.03 ENSMUST00000062069.5
prostaglandin-endoperoxide synthase 1
chr1_-_172027251 0.03 ENSMUST00000138714.1
vang-like 2 (van gogh, Drosophila)
chr3_+_55782500 0.03 ENSMUST00000075422.4
mab-21-like 1 (C. elegans)
chr9_+_119063429 0.03 ENSMUST00000141185.1
ENSMUST00000126251.1
ENSMUST00000136561.1
villin-like
chr13_-_85127514 0.01 ENSMUST00000179230.1
predicted gene 4076
chr1_-_144545320 0.01 ENSMUST00000184189.1
regulator of G-protein signalling 21
chr5_-_138187177 0.01 ENSMUST00000110937.1
ENSMUST00000139276.1
ENSMUST00000048698.7
ENSMUST00000123415.1
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr15_-_34356421 0.00 ENSMUST00000179647.1
RIKEN cDNA 9430069I07 gene
chr9_-_55919605 0.00 ENSMUST00000037408.8
S phase cyclin A-associated protein in the ER

Network of associatons between targets according to the STRING database.

First level regulatory network of Hoxa3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0061402 glycerol biosynthetic process(GO:0006114) positive regulation of transcription from RNA polymerase II promoter in response to acidic pH(GO:0061402)
0.0 0.1 GO:0070173 regulation of enamel mineralization(GO:0070173)
0.0 0.1 GO:0060490 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0060187 cell pole(GO:0060187)
0.0 0.0 GO:0042585 germinal vesicle(GO:0042585)
0.0 0.1 GO:0097504 Gemini of coiled bodies(GO:0097504)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0004574 oligo-1,6-glucosidase activity(GO:0004574)
0.0 0.1 GO:0019770 IgG receptor activity(GO:0019770)
0.0 0.2 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.1 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism