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12D miR HR13_24

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Results for Grhl1

Z-value: 0.83

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Transcription factors associated with Grhl1

Gene Symbol Gene ID Gene Info
ENSMUSG00000020656.9 grainyhead like transcription factor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Grhl1mm10_v2_chr12_+_24572276_245723080.471.5e-01Click!

Activity profile of Grhl1 motif

Sorted Z-values of Grhl1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_-_144332146 2.52 ENSMUST00000037423.3
ovo-like 2 (Drosophila)
chr3_-_88548249 2.17 ENSMUST00000131775.1
ENSMUST00000008745.6
RAB25, member RAS oncogene family
chr17_+_87635974 2.11 ENSMUST00000053577.8
epithelial cell adhesion molecule
chr4_+_141242850 1.18 ENSMUST00000138096.1
ENSMUST00000006618.2
ENSMUST00000125392.1
Rho guanine nucleotide exchange factor (GEF) 19
chr3_-_85722474 0.96 ENSMUST00000119077.1
family with sequence similarity 160, member A1
chr7_-_45333754 0.95 ENSMUST00000042194.8
transient receptor potential cation channel, subfamily M, member 4
chr6_-_131316398 0.94 ENSMUST00000121078.1
serine/threonine/tyrosine kinase 1
chr1_+_135818593 0.90 ENSMUST00000038760.8
ladinin
chr3_+_92288566 0.79 ENSMUST00000090872.4
small proline-rich protein 2A3
chr16_-_55822128 0.66 ENSMUST00000114458.1
nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
chrX_-_38456407 0.65 ENSMUST00000074913.5
ENSMUST00000016678.7
ENSMUST00000061755.8
lysosomal-associated membrane protein 2
chr9_+_43310763 0.61 ENSMUST00000034511.5
tripartite motif-containing 29
chr14_-_73385225 0.61 ENSMUST00000022704.7
integral membrane protein 2B
chr2_-_127541385 0.60 ENSMUST00000103214.2
prominin 2
chr7_+_141338963 0.59 ENSMUST00000143633.1
EPS8-like 2
chr2_-_151973387 0.59 ENSMUST00000109863.1
family with sequence similarity 110, member A
chr1_-_131279544 0.58 ENSMUST00000062108.3
inhibitor of kappaB kinase epsilon
chr18_+_56432116 0.58 ENSMUST00000070166.5
GRAM domain containing 3
chr5_-_137600650 0.57 ENSMUST00000111007.1
ENSMUST00000133705.1
motile sperm domain containing 3
chr2_-_180289879 0.56 ENSMUST00000038529.1
RBBP8 N-terminal like
chr9_-_7873016 0.53 ENSMUST00000013949.8
baculoviral IAP repeat-containing 3
chr15_-_95830072 0.53 ENSMUST00000168960.1
predicted gene, 17546
chr8_-_93229517 0.51 ENSMUST00000176282.1
ENSMUST00000034173.7
carboxylesterase 1E
chr9_+_15239045 0.49 ENSMUST00000034413.6
V-set and transmembrane domain containing 5
chr14_+_79481164 0.49 ENSMUST00000040131.5
E74-like factor 1
chr9_-_7873157 0.46 ENSMUST00000159323.1
ENSMUST00000115673.2
baculoviral IAP repeat-containing 3
chr19_+_5568002 0.45 ENSMUST00000096318.3
adaptor-related protein complex 5, beta 1 subunit
chr9_+_78289923 0.44 ENSMUST00000119823.1
ENSMUST00000121273.1
predicted gene 10639
chr9_-_78347162 0.43 ENSMUST00000129247.1
glutathione S-transferase, alpha 2 (Yc2)
chr4_+_155086577 0.40 ENSMUST00000030915.4
ENSMUST00000155775.1
ENSMUST00000127457.1
MORN repeat containing 1
chr2_-_127541412 0.39 ENSMUST00000028855.7
prominin 2
chr9_-_7872983 0.38 ENSMUST00000115672.1
baculoviral IAP repeat-containing 3
chr9_-_78347140 0.37 ENSMUST00000034902.5
glutathione S-transferase, alpha 2 (Yc2)
chrX_-_112698642 0.37 ENSMUST00000039887.3
premature ovarian failure 1B
chr17_-_65884902 0.32 ENSMUST00000024905.9
ralA binding protein 1
chr12_-_54656496 0.31 ENSMUST00000056228.6
serine palmitoyltransferase, small subunit A
chr10_-_79533750 0.28 ENSMUST00000166804.1
ENSMUST00000063879.5
phosphatidic acid phosphatase type 2C
chr17_+_35533194 0.27 ENSMUST00000025273.8
psoriasis susceptibility 1 candidate 2 (human)
chr4_-_155086271 0.22 ENSMUST00000030914.3
RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
chr6_-_113377510 0.22 ENSMUST00000099118.2
transcriptional adaptor 3
chr18_-_46280820 0.21 ENSMUST00000025354.3
protein geranylgeranyltransferase type I, beta subunit
chr17_+_36837123 0.20 ENSMUST00000179968.1
ENSMUST00000130367.1
ENSMUST00000130801.1
ENSMUST00000144182.1
ENSMUST00000123715.1
ENSMUST00000053434.8
tripartite motif-containing 26
chr9_-_107541816 0.19 ENSMUST00000041459.3
cytochrome b-561 domain containing 2
chr5_+_130029277 0.19 ENSMUST00000026608.7
calcitonin gene-related peptide-receptor component protein
chr17_+_29268788 0.18 ENSMUST00000064709.5
ENSMUST00000120346.1
cDNA sequence BC004004
chr12_-_20900867 0.18 ENSMUST00000079237.5
zinc finger protein 125
chr2_+_172550761 0.17 ENSMUST00000099058.3
transcription factor AP-2, gamma
chr16_+_44173271 0.17 ENSMUST00000088356.4
ENSMUST00000169582.1
predicted gene 608
chrX_+_100730178 0.16 ENSMUST00000113744.1
glycerophosphodiester phosphodiesterase domain containing 2
chr6_-_113377376 0.16 ENSMUST00000043333.2
transcriptional adaptor 3
chr16_+_44173239 0.15 ENSMUST00000119746.1
predicted gene 608
chr7_-_102065044 0.15 ENSMUST00000130074.1
ENSMUST00000131104.1
ENSMUST00000096639.5
ring finger protein 121
chr2_-_30967859 0.15 ENSMUST00000028200.8
torsin family 1, member A (torsin A)
chr19_+_3958803 0.14 ENSMUST00000179433.1
RIKEN cDNA 1700055N04 gene
chr7_-_24545994 0.14 ENSMUST00000011776.6
phospholipase A2 inhibitor and LY6/PLAUR domain containing
chr11_+_53350783 0.14 ENSMUST00000060945.5
AF4/FMR2 family, member 4
chr14_-_57133268 0.14 ENSMUST00000160703.1
gap junction protein, beta 6
chr8_+_123477859 0.13 ENSMUST00000001520.7
AFG3(ATPase family gene 3)-like 1 (yeast)
chr7_-_29518566 0.13 ENSMUST00000181975.1
signal-induced proliferation-associated 1 like 3
chr9_-_44268156 0.12 ENSMUST00000169651.1
NLR family member X1
chr16_-_26989974 0.10 ENSMUST00000089832.4
geminin coiled-coil domain containing
chr7_+_65693417 0.09 ENSMUST00000032726.7
ENSMUST00000107495.3
TM2 domain containing 3
chr7_+_65693447 0.08 ENSMUST00000143508.1
TM2 domain containing 3
chr18_-_64660981 0.07 ENSMUST00000025482.8
ATPase, class I, type 8B, member 1
chr11_-_105455294 0.05 ENSMUST00000138977.1
membrane-associated ring finger (C3HC4) 10
chr16_-_36131156 0.05 ENSMUST00000161638.1
ENSMUST00000096090.2
cystatin A
chr14_+_75136326 0.05 ENSMUST00000145303.1
lymphocyte cytosolic protein 1
chr8_-_69996326 0.04 ENSMUST00000177851.1
ENSMUST00000065169.4
GATA zinc finger domain containing 2A
chr3_-_103732553 0.04 ENSMUST00000169286.1
cDNA sequence BC027582
chr1_-_160153571 0.03 ENSMUST00000039178.5
tenascin N
chr17_-_56005566 0.03 ENSMUST00000043785.6
signal transducing adaptor family member 2
chr8_+_80494032 0.03 ENSMUST00000063359.6
glycophorin A
chr8_-_95853501 0.02 ENSMUST00000040481.3
solute carrier family 38, member 7
chr15_-_76014318 0.02 ENSMUST00000060807.5
family with sequence similarity 83, member H
chr4_-_19570073 0.00 ENSMUST00000029885.4
copine III

Network of associatons between targets according to the STRING database.

First level regulatory network of Grhl1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:2000048 negative regulation of cell-cell adhesion mediated by cadherin(GO:2000048)
0.3 0.9 GO:0086047 membrane depolarization during Purkinje myocyte cell action potential(GO:0086047)
0.3 2.5 GO:0060214 endocardium formation(GO:0060214)
0.2 1.0 GO:2001287 negative regulation of caveolin-mediated endocytosis(GO:2001287)
0.2 0.7 GO:0071211 protein targeting to vacuole involved in autophagy(GO:0071211)
0.1 2.2 GO:0031268 pseudopodium organization(GO:0031268)
0.1 0.6 GO:0042985 negative regulation of amyloid precursor protein biosynthetic process(GO:0042985)
0.1 1.4 GO:1902916 positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.3 GO:1903378 positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903378)
0.0 0.6 GO:1900029 positive regulation of ruffle assembly(GO:1900029)
0.0 0.2 GO:0060598 dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis(GO:0060598)
0.0 0.4 GO:0090043 regulation of tubulin deacetylation(GO:0090043)
0.0 0.2 GO:0051771 negative regulation of nitric-oxide synthase biosynthetic process(GO:0051771)
0.0 0.2 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.7 GO:0080184 response to stilbenoid(GO:0035634) response to phenylpropanoid(GO:0080184)
0.0 0.8 GO:0018149 peptide cross-linking(GO:0018149)
0.0 0.5 GO:0050860 negative regulation of T cell receptor signaling pathway(GO:0050860)
0.0 0.2 GO:1901727 positive regulation of histone deacetylase activity(GO:1901727)
0.0 0.9 GO:0033006 regulation of mast cell activation involved in immune response(GO:0033006) regulation of mast cell degranulation(GO:0043304)
0.0 0.1 GO:0021650 vestibulocochlear nerve formation(GO:0021650)
0.0 0.6 GO:0010884 positive regulation of lipid storage(GO:0010884)
0.0 0.1 GO:0072321 chaperone-mediated protein transport(GO:0072321)
0.0 0.1 GO:0039536 negative regulation of RIG-I signaling pathway(GO:0039536)
0.0 0.2 GO:0090527 actin filament reorganization(GO:0090527)
0.0 0.2 GO:0071340 skeletal muscle acetylcholine-gated channel clustering(GO:0071340)
0.0 0.0 GO:0021506 anterior neuropore closure(GO:0021506) neuropore closure(GO:0021995)
0.0 0.2 GO:1902187 negative regulation of viral release from host cell(GO:1902187)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0044393 microspike(GO:0044393)
0.2 0.7 GO:0097636 platelet dense granule membrane(GO:0031088) intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637)
0.1 2.2 GO:0031143 pseudopodium(GO:0031143)
0.1 0.8 GO:0001533 cornified envelope(GO:0001533)
0.0 0.3 GO:0031211 serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 0.9 GO:0034706 sodium channel complex(GO:0034706)
0.0 0.1 GO:0005745 m-AAA complex(GO:0005745)
0.0 2.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.4 GO:0000124 SAGA complex(GO:0000124)
0.0 0.1 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.4 GO:0030057 desmosome(GO:0030057)
0.0 0.1 GO:0061689 tricellular tight junction(GO:0061689)
0.0 0.6 GO:0030660 Golgi-associated vesicle membrane(GO:0030660)
0.0 0.2 GO:0042575 DNA polymerase complex(GO:0042575)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.7 GO:0098641 cadherin binding involved in cell-cell adhesion(GO:0098641)
0.1 0.6 GO:0008384 NF-kappaB-inducing kinase activity(GO:0004704) IkappaB kinase activity(GO:0008384)
0.1 2.2 GO:0031489 myosin V binding(GO:0031489)
0.1 0.3 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.1 GO:0004859 phospholipase inhibitor activity(GO:0004859)
0.0 0.2 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.0 0.8 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.5 GO:0016290 palmitoyl-CoA hydrolase activity(GO:0016290)
0.0 1.4 GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027)
0.0 0.9 GO:0005227 calcium activated cation channel activity(GO:0005227)
0.0 0.2 GO:0097642 calcitonin family receptor activity(GO:0097642)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.6 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 1.0 GO:0015485 cholesterol binding(GO:0015485)
0.0 0.9 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.3 GO:0017160 Ral GTPase binding(GO:0017160)
0.0 1.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.6 GO:0001540 beta-amyloid binding(GO:0001540)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.4 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.0 0.6 REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon
0.0 0.8 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation