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12D miR HR13_24

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Results for AGCAGCG

Z-value: 0.24

Motif logo

miRNA associated with seed AGCAGCG

NamemiRBASE accession
MIMAT0003188

Activity profile of AGCAGCG motif

Sorted Z-values of AGCAGCG motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_-_87108656 0.35 ENSMUST00000051395.8
proline rich 11
chr1_-_21961581 0.33 ENSMUST00000029667.6
ENSMUST00000173058.1
ENSMUST00000173404.1
potassium voltage-gated channel, subfamily Q, member 5
chr4_+_101419277 0.32 ENSMUST00000102780.1
ENSMUST00000106946.1
ENSMUST00000106945.1
adenylate kinase 4
chr9_-_61946768 0.30 ENSMUST00000034815.7
kinesin family member 23
chr7_-_38107490 0.28 ENSMUST00000108023.3
cyclin E1
chr11_-_63922257 0.23 ENSMUST00000094103.3
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
chr9_-_36726374 0.22 ENSMUST00000172702.2
ENSMUST00000172742.1
ENSMUST00000034625.5
checkpoint kinase 1
chr14_+_45351473 0.21 ENSMUST00000111835.2
serine/threonine/tyrosine interaction protein
chr7_+_28179469 0.19 ENSMUST00000085901.6
ENSMUST00000172761.1
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
chr8_+_117157972 0.19 ENSMUST00000064488.4
ENSMUST00000162997.1
giant axonal neuropathy
chr17_-_28622479 0.16 ENSMUST00000130643.1
serine/arginine-rich protein specific kinase 1
chr17_+_45523416 0.16 ENSMUST00000113547.1
t-complex-associated testis expressed 1
chr2_+_68117713 0.15 ENSMUST00000112346.2
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
chr9_+_51765325 0.14 ENSMUST00000065496.5
Rho GTPase activating protein 20
chr10_+_13090788 0.14 ENSMUST00000121646.1
ENSMUST00000121325.1
ENSMUST00000121766.1
pleiomorphic adenoma gene-like 1
chr6_+_140424086 0.14 ENSMUST00000087622.3
pleckstrin homology domain containing, family A member 5
chr7_+_18925863 0.13 ENSMUST00000172835.1
ENSMUST00000032571.8
neuro-oncological ventral antigen 2
chr7_+_101108768 0.13 ENSMUST00000098250.3
ENSMUST00000032931.7
FCH and double SH3 domains 2
chr11_-_45944910 0.12 ENSMUST00000129820.1
U7 snRNP-specific Sm-like protein LSM11
chr12_-_98577940 0.12 ENSMUST00000110113.1
potassium channel, subfamily K, member 10
chrX_-_48034842 0.12 ENSMUST00000039026.7
apelin
chr14_+_14820765 0.12 ENSMUST00000112631.2
ENSMUST00000178538.1
ENSMUST00000112630.2
NIMA (never in mitosis gene a)- related kinase 10
chr14_-_69284982 0.12 ENSMUST00000183882.1
ENSMUST00000037064.4
solute carrier family 25, member 37
chr3_+_138526174 0.12 ENSMUST00000029803.7
eukaryotic translation initiation factor 4E
chr19_+_36926071 0.11 ENSMUST00000099494.3
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
chr1_-_106759727 0.11 ENSMUST00000010049.4
3-ketodihydrosphingosine reductase
chr9_+_108692116 0.11 ENSMUST00000035220.6
protein kinase, cAMP dependent regulatory, type II alpha
chr3_+_51415986 0.11 ENSMUST00000029303.7
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr4_-_136835843 0.10 ENSMUST00000105846.2
ENSMUST00000059287.7
ENSMUST00000105845.2
Eph receptor B2
chr1_-_162740350 0.10 ENSMUST00000182331.1
ENSMUST00000183011.1
ENSMUST00000182593.1
ENSMUST00000182149.1
proline-rich coiled-coil 2C
chr2_+_49619277 0.10 ENSMUST00000028102.7
kinesin family member 5C
chr1_-_106714217 0.10 ENSMUST00000112751.1
B cell leukemia/lymphoma 2
chr12_-_108003594 0.10 ENSMUST00000066060.4
B cell leukemia/lymphoma 11B
chr5_+_113490447 0.09 ENSMUST00000094452.3
WSC domain containing 2
chr3_+_145987835 0.09 ENSMUST00000039517.6
synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr4_+_139574697 0.09 ENSMUST00000174078.1
intermediate filament family orphan 2
chr4_+_80910646 0.09 ENSMUST00000055922.3
leucine rich adaptor protein 1-like
chr10_-_85916902 0.08 ENSMUST00000037646.7
PR domain containing 4
chr13_+_44731265 0.07 ENSMUST00000173246.1
jumonji, AT rich interactive domain 2
chr7_+_110018301 0.07 ENSMUST00000084731.3
importin 7
chr15_+_103240405 0.07 ENSMUST00000036004.9
ENSMUST00000087351.7
heterogeneous nuclear ribonucleoprotein A1
chr13_-_103764502 0.07 ENSMUST00000074616.5
splicing regulatory glutamine/lysine-rich protein 1
chr5_+_121220191 0.07 ENSMUST00000119892.2
ENSMUST00000042614.6
predicted gene 15800
chr12_-_112829351 0.07 ENSMUST00000062092.5
cell division cycle associated 4
chr4_-_56947411 0.06 ENSMUST00000107609.3
ENSMUST00000068792.6
transmembrane protein 245
chr10_+_80148263 0.06 ENSMUST00000099492.3
ENSMUST00000042057.5
midnolin
chr16_-_46010212 0.06 ENSMUST00000130481.1
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr1_-_46854046 0.06 ENSMUST00000027131.4
solute carrier family 39 (zinc transporter), member 10
chr19_-_59345746 0.06 ENSMUST00000099274.2
PDZ domain containing 8
chr8_-_77724426 0.05 ENSMUST00000034029.7
endothelin receptor type A
chr1_-_152090308 0.05 ENSMUST00000044581.7
RIKEN cDNA 1700025G04 gene
chr1_-_74951651 0.05 ENSMUST00000164097.1
Indian hedgehog
chr4_+_115839192 0.05 ENSMUST00000019677.5
ENSMUST00000144427.1
ENSMUST00000106513.3
ENSMUST00000130819.1
ENSMUST00000151203.1
ENSMUST00000140315.1
MAP kinase-interacting serine/threonine kinase 1
chr8_+_22476700 0.04 ENSMUST00000067786.7
solute carrier family 20, member 2
chr17_+_15499888 0.04 ENSMUST00000159197.1
ENSMUST00000162505.1
ENSMUST00000014911.5
ENSMUST00000147081.2
ENSMUST00000118001.1
ENSMUST00000143924.1
ENSMUST00000119879.2
ENSMUST00000155051.1
ENSMUST00000117593.1
TATA box binding protein
chr8_+_3515378 0.04 ENSMUST00000004681.7
ENSMUST00000111070.2
patatin-like phospholipase domain containing 6
chr8_+_83900096 0.04 ENSMUST00000141158.1
latrophilin 1
chr17_-_42876417 0.04 ENSMUST00000024709.7
CD2-associated protein
chr12_-_56535047 0.04 ENSMUST00000178477.2
NK2 homeobox 1
chr11_+_106036867 0.04 ENSMUST00000058438.8
DDB1 and CUL4 associated factor 7
chr8_-_104443001 0.04 ENSMUST00000041769.6
dynein, cytoplasmic 1 light intermediate chain 2
chr5_-_99252839 0.03 ENSMUST00000168092.1
ENSMUST00000031276.8
RasGEF domain family, member 1B
chr4_-_141790891 0.03 ENSMUST00000038014.4
ENSMUST00000153880.1
DnaJ (Hsp40) homolog, subfamily C, member 16
chr17_-_46629420 0.03 ENSMUST00000044442.8
PTK7 protein tyrosine kinase 7
chr5_+_88886809 0.03 ENSMUST00000148750.1
solute carrier family 4 (anion exchanger), member 4
chr9_-_108190352 0.03 ENSMUST00000035208.7
bassoon
chr4_-_126429501 0.03 ENSMUST00000069097.6
argonaute RISC catalytic subunit 3
chr11_-_73177002 0.03 ENSMUST00000108480.1
ENSMUST00000054952.3
ER membrane protein complex subunit 6
chr13_+_49421229 0.03 ENSMUST00000021817.8
inositol 1,3,4,5,6-pentakisphosphate 2-kinase
chr8_+_88521344 0.03 ENSMUST00000034086.5
naked cuticle 1 homolog (Drosophila)
chr8_+_105900421 0.02 ENSMUST00000049699.8
protein serine kinase H1
chr19_-_60581013 0.02 ENSMUST00000111460.3
ENSMUST00000081790.7
ENSMUST00000166712.1
CDK2 associated, cullin domain 1
chr8_-_3279606 0.02 ENSMUST00000091291.4
insulin receptor
chr4_+_108619925 0.02 ENSMUST00000030320.6
coiled-coil and C2 domain containing 1B
chr7_-_118491912 0.02 ENSMUST00000178344.1
inositol 1,4,5-triphosphate receptor interacting protein-like 2
chr5_-_145140238 0.02 ENSMUST00000031627.8
PDGFA associated protein 1
chr11_+_58009064 0.02 ENSMUST00000071487.6
ENSMUST00000178636.1
La ribonucleoprotein domain family, member 1
chr11_-_82890541 0.02 ENSMUST00000092844.6
ENSMUST00000021033.9
ENSMUST00000018985.8
RAD51 homolog D
chr17_-_31855782 0.02 ENSMUST00000024839.4
salt inducible kinase 1
chr7_-_118584669 0.02 ENSMUST00000044195.4
transmembrane channel-like gene family 7
chr15_+_25984359 0.02 ENSMUST00000061875.6
zinc finger protein 622
chr8_-_86885222 0.02 ENSMUST00000034074.7
NEDD4 binding protein 1
chr5_-_89883321 0.02 ENSMUST00000163159.1
ENSMUST00000061427.5
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
chr19_+_5447692 0.02 ENSMUST00000025850.5
fos-like antigen 1
chr3_+_98382438 0.01 ENSMUST00000056096.8
zinc finger protein 697
chr11_+_80477015 0.01 ENSMUST00000053413.10
ENSMUST00000147694.1
cyclin-dependent kinase 5, regulatory subunit 1 (p35)
chrX_-_136868537 0.01 ENSMUST00000058814.6
RAB9B, member RAS oncogene family
chr19_+_8953826 0.01 ENSMUST00000096239.5
terminal uridylyl transferase 1, U6 snRNA-specific
chr6_+_47877204 0.01 ENSMUST00000061890.7
zinc finger protein 282
chr11_+_16257706 0.01 ENSMUST00000109645.2
ENSMUST00000109647.2
V-set and transmembrane domain containing 2A
chr10_+_128411616 0.01 ENSMUST00000096386.5
ENSMUST00000171342.1
ring finger protein 41
chr6_-_116193426 0.01 ENSMUST00000088896.3
transmembrane and coiled coil domains 1
chr14_+_56887795 0.01 ENSMUST00000022511.8
zinc finger, MYM-type 2
chr11_+_107547925 0.00 ENSMUST00000100305.1
ENSMUST00000075012.1
ENSMUST00000106746.1
helicase with zinc finger domain
chr2_-_181459364 0.00 ENSMUST00000155535.1
ENSMUST00000029106.6
ENSMUST00000087409.3
zinc finger and BTB domain containing 46
chr14_+_26579535 0.00 ENSMUST00000037585.7
DENN/MADD domain containing 6A
chr11_-_20112876 0.00 ENSMUST00000000137.7
ARP2 actin-related protein 2
chr3_-_122984404 0.00 ENSMUST00000090379.2
ubiquitin specific peptidase 53
chr13_+_47122719 0.00 ENSMUST00000068891.4
ring finger protein 144B
chr1_-_75479271 0.00 ENSMUST00000079205.7
ENSMUST00000094818.2
chondroitin polymerizing factor

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCAGCG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0000915 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837)
0.1 0.2 GO:0045204 MAPK export from nucleus(GO:0045204)
0.0 0.1 GO:0043397 corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397) positive regulation of corticotropin-releasing hormone secretion(GO:0051466) regulation of G-protein coupled receptor internalization(GO:1904020)
0.0 0.1 GO:0097535 lymphoid lineage cell migration(GO:0097534) lymphoid lineage cell migration into thymus(GO:0097535)
0.0 0.2 GO:0006477 protein sulfation(GO:0006477)
0.0 0.1 GO:0032847 regulation of nitrogen utilization(GO:0006808) nitrogen utilization(GO:0019740) regulation of cellular pH reduction(GO:0032847)
0.0 0.2 GO:0006975 DNA damage induced protein phosphorylation(GO:0006975)
0.0 0.1 GO:0021631 optic nerve morphogenesis(GO:0021631)
0.0 0.1 GO:0098963 dendritic transport of ribonucleoprotein complex(GO:0098961) dendritic transport of messenger ribonucleoprotein complex(GO:0098963) anterograde dendritic transport of messenger ribonucleoprotein complex(GO:0098964)
0.0 0.1 GO:0006682 galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)
0.0 0.0 GO:0060220 camera-type eye photoreceptor cell fate commitment(GO:0060220)
0.0 0.1 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0 0.3 GO:0046033 AMP metabolic process(GO:0046033)
0.0 0.0 GO:0021759 globus pallidus development(GO:0021759)
0.0 0.1 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.0 GO:0099526 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.1 GO:0035562 negative regulation of chromatin binding(GO:0035562)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0097149 centralspindlin complex(GO:0097149)
0.0 0.1 GO:0005683 U7 snRNP(GO:0005683)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0031415 NatA complex(GO:0031415)
0.0 0.0 GO:1990257 piccolo-bassoon transport vesicle(GO:1990257)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)
0.1 0.2 GO:0035402 histone kinase activity (H3-T11 specific)(GO:0035402)
0.0 0.1 GO:0071209 U7 snRNA binding(GO:0071209)
0.0 0.1 GO:0047275 glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275)
0.0 0.2 GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.0 0.1 GO:0034190 apolipoprotein receptor binding(GO:0034190)
0.0 0.1 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.0 0.0 GO:0004962 endothelin receptor activity(GO:0004962)
0.0 0.0 GO:0015319 sodium:inorganic phosphate symporter activity(GO:0015319)
0.0 0.0 GO:0001132 RNA polymerase III transcription factor activity, sequence-specific DNA binding(GO:0001034) RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly(GO:0001129) RNA polymerase II transcription factor activity, TBP-class protein binding(GO:0001132)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.0 GO:0071936 coreceptor activity involved in Wnt signaling pathway(GO:0071936)
0.0 0.1 GO:0051434 BH3 domain binding(GO:0051434)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 SA REG CASCADE OF CYCLIN EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0 0.2 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.3 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.0 0.3 REACTOME KINESINS Genes involved in Kinesins
0.0 0.1 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.1 REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS Genes involved in Tandem pore domain potassium channels