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12D miR HR13_24

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Results for Clock

Z-value: 0.20

Motif logo

Transcription factors associated with Clock

Gene Symbol Gene ID Gene Info
ENSMUSG00000029238.8 circadian locomotor output cycles kaput

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Clockmm10_v2_chr5_-_76304474_763045480.372.6e-01Click!

Activity profile of Clock motif

Sorted Z-values of Clock motif

Promoter Log-likelihood Transcript Gene Gene Info
chr3_+_40708855 0.13 ENSMUST00000091184.6
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
chrX_+_8271133 0.12 ENSMUST00000127103.1
ENSMUST00000115591.1
solute carrier family 38, member 5
chr17_-_24658425 0.12 ENSMUST00000095544.4
neuropeptide W
chrX_+_8271381 0.11 ENSMUST00000033512.4
solute carrier family 38, member 5
chr15_+_62039216 0.10 ENSMUST00000183297.1
plasmacytoma variant translocation 1
chrX_-_51681703 0.10 ENSMUST00000088172.5
heparan sulfate 6-O-sulfotransferase 2
chr16_+_4036942 0.10 ENSMUST00000137748.1
ENSMUST00000006136.4
ENSMUST00000157044.1
ENSMUST00000120009.1
deoxyribonuclease I
chrX_+_8271642 0.09 ENSMUST00000115590.1
solute carrier family 38, member 5
chr4_-_116405986 0.09 ENSMUST00000123072.1
ENSMUST00000144281.1
microtubule associated serine/threonine kinase 2
chr2_+_14229390 0.08 ENSMUST00000028045.2
mannose receptor, C type 1
chr4_+_107968332 0.08 ENSMUST00000106713.3
solute carrier family 1 (glutamate transporter), member 7
chr3_-_95882031 0.08 ENSMUST00000161994.1
predicted gene 129
chr1_-_12991109 0.08 ENSMUST00000115403.2
ENSMUST00000115402.1
solute carrier organic anion transporter family, member 5A1
chr9_+_107587711 0.08 ENSMUST00000010192.5
interferon-related developmental regulator 2
chr16_-_45158453 0.08 ENSMUST00000181750.1
solute carrier family 35, member A5
chr9_+_44066993 0.07 ENSMUST00000034508.7
ubiquitin specific peptidase 2
chr10_+_22158566 0.07 ENSMUST00000181645.1
ENSMUST00000105522.2
retinoic acid early transcript 1E
histocompatibility 60b
chr1_-_153332724 0.07 ENSMUST00000027752.8
laminin, gamma 1
chr2_+_31887262 0.07 ENSMUST00000138325.1
ENSMUST00000028187.6
laminin gamma 3
chrX_-_101085352 0.07 ENSMUST00000101362.1
ENSMUST00000073927.4
solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
chr2_+_164769892 0.07 ENSMUST00000088248.6
ENSMUST00000001439.6
ubiquitin-conjugating enzyme E2C
chr15_-_98807910 0.07 ENSMUST00000075444.6
dendrin
chr6_-_49214954 0.06 ENSMUST00000031838.7
insulin-like growth factor 2 mRNA binding protein 3
chr18_+_67464849 0.06 ENSMUST00000025411.7
slowmo homolog 1 (Drosophila)
chr7_-_46795661 0.06 ENSMUST00000123725.1
Hermansky-Pudlak syndrome 5 homolog (human)
chr8_+_125734203 0.06 ENSMUST00000034313.6
ENSMUST00000065135.5
nucleoside-triphosphatase, cancer-related
chr5_-_108795352 0.06 ENSMUST00000004943.1
transmembrane emp24 protein transport domain containing
chr2_-_130906338 0.06 ENSMUST00000146975.1
RIKEN cDNA 4930402H24 gene
chr11_+_78178651 0.05 ENSMUST00000092880.7
ENSMUST00000127587.1
ENSMUST00000108338.1
TLC domain containing 1
chr6_+_17463826 0.05 ENSMUST00000140070.1
met proto-oncogene
chr11_-_70982987 0.05 ENSMUST00000078528.6
complement component 1, q subcomponent binding protein
chr3_+_145576196 0.05 ENSMUST00000098534.4
zinc finger, HIT type 6
chr16_+_32608973 0.05 ENSMUST00000120680.1
transferrin receptor
chr14_-_20181773 0.05 ENSMUST00000024011.8
potassium channel, subfamily K, member 5
chr10_-_14544972 0.05 ENSMUST00000041168.4
G protein-coupled receptor 126
chr8_+_123186235 0.05 ENSMUST00000019422.4
dipeptidase 1 (renal)
chr17_+_35001282 0.05 ENSMUST00000174260.1
valyl-tRNA synthetase
chr5_+_76951382 0.05 ENSMUST00000141687.1
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr7_+_25659153 0.05 ENSMUST00000079634.6
exosome component 5
chr11_+_101316917 0.04 ENSMUST00000151385.1
proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
chr1_-_55088156 0.04 ENSMUST00000127861.1
ENSMUST00000144077.1
heat shock protein 1 (chaperonin)
chr11_-_77489666 0.04 ENSMUST00000037593.7
ENSMUST00000092892.3
ankyrin repeat domain 13b
chr15_-_10714612 0.04 ENSMUST00000169385.1
retinoic acid induced 14
chr7_+_19577287 0.04 ENSMUST00000108453.1
zinc finger protein 296
chr17_-_35000848 0.04 ENSMUST00000166828.3
DNA segment, Chr 17, human D6S56E 5
chr12_-_71136611 0.04 ENSMUST00000021486.8
ENSMUST00000166120.1
translocase of inner mitochondrial membrane 9
chr10_-_127522428 0.04 ENSMUST00000026470.4
serine hydroxymethyltransferase 2 (mitochondrial)
chr1_-_75219245 0.04 ENSMUST00000079464.6
tubulin, alpha 4A
chr1_+_59684949 0.04 ENSMUST00000027174.3
NOP58 ribonucleoprotein
chr10_+_69534039 0.04 ENSMUST00000182557.1
ankyrin 3, epithelial
chr17_+_71204647 0.03 ENSMUST00000126681.1
lipin 2
chr9_+_44067072 0.03 ENSMUST00000177054.1
ubiquitin specific peptidase 2
chr3_-_106483435 0.03 ENSMUST00000164330.1
RIKEN cDNA 2010016I18 gene
chr14_-_89898466 0.03 ENSMUST00000081204.4
predicted gene 10110
chr15_+_81811414 0.03 ENSMUST00000023024.7
thyrotroph embryonic factor
chr11_-_72489904 0.03 ENSMUST00000045303.3
spinster homolog 2
chr4_+_32657107 0.03 ENSMUST00000071642.4
ENSMUST00000178134.1
midasin homolog (yeast)
chr11_-_118290167 0.03 ENSMUST00000144153.1
ubiquitin specific peptidase 36
chr16_-_45158183 0.03 ENSMUST00000114600.1
solute carrier family 35, member A5
chr15_+_44787746 0.03 ENSMUST00000181839.1
RIKEN cDNA 2310069G16 gene
chr1_-_186705980 0.03 ENSMUST00000045288.8
transforming growth factor, beta 2
chr11_-_76217490 0.03 ENSMUST00000102500.4
gem (nuclear organelle) associated protein 4
chr15_+_80671829 0.03 ENSMUST00000023044.5
family with sequence similarity 83, member F
chr7_+_126695942 0.03 ENSMUST00000106369.1
bolA-like 2 (E. coli)
chr18_+_35553401 0.03 ENSMUST00000181664.1
small nucleolar RNA host gene 4 (non-protein coding)
chr17_-_26199008 0.03 ENSMUST00000142410.1
ENSMUST00000120333.1
ENSMUST00000039113.7
protein disulfide isomerase associated 2
chr9_-_121495678 0.03 ENSMUST00000035120.4
cholecystokinin
chr6_+_17463927 0.03 ENSMUST00000115442.1
met proto-oncogene
chr18_+_32837225 0.03 ENSMUST00000166214.1
ENSMUST00000053663.9
WD repeat domain 36
chr5_+_34999111 0.03 ENSMUST00000114283.1
regulator of G-protein signaling 12
chr12_+_71136848 0.03 ENSMUST00000149564.1
ENSMUST00000045907.8
RIKEN cDNA 2700049A03 gene
chr9_-_110654161 0.03 ENSMUST00000133191.1
ENSMUST00000167320.1
neurobeachin-like 2
chr11_+_72441341 0.03 ENSMUST00000045633.5
MYB binding protein (P160) 1a
chr19_+_26623419 0.03 ENSMUST00000176584.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr7_-_98361275 0.03 ENSMUST00000094161.4
ENSMUST00000164726.1
ENSMUST00000167405.1
tsukushi
chr11_+_60417238 0.03 ENSMUST00000070681.6
GID complex subunit 4, VID24 homolog (S. cerevisiae)
chr10_+_116301374 0.03 ENSMUST00000092167.5
protein tyrosine phosphatase, receptor type, B
chr3_+_88532314 0.03 ENSMUST00000172699.1
mex3 homolog A (C. elegans)
chr9_-_57606234 0.03 ENSMUST00000045068.8
complexin 3
chr16_+_43889896 0.03 ENSMUST00000122014.1
ENSMUST00000178400.1
RIKEN cDNA 2610015P09 gene
chr3_-_101287879 0.03 ENSMUST00000152321.1
CD2 antigen
chrX_+_36328353 0.03 ENSMUST00000016383.3
LON peptidase N-terminal domain and ring finger 3
chr11_-_60417022 0.03 ENSMUST00000108721.1
ATP synthase mitochondrial F1 complex assembly factor 2
chr11_+_76217608 0.02 ENSMUST00000040806.4
diazepam binding inhibitor-like 5
chr14_-_118706180 0.02 ENSMUST00000036554.6
ENSMUST00000166646.1
ATP-binding cassette, sub-family C (CFTR/MRP), member 4
chr8_+_123117354 0.02 ENSMUST00000037900.8
copine VII
chr17_-_35000746 0.02 ENSMUST00000163360.1
DNA segment, Chr 17, human D6S56E 5
chr19_-_45749563 0.02 ENSMUST00000070215.7
nucleoplasmin 3
chrX_-_95444789 0.02 ENSMUST00000084535.5
APC membrane recruitment 1
chr8_+_105690906 0.02 ENSMUST00000062574.6
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
chr7_-_25658726 0.02 ENSMUST00000071329.6
branched chain ketoacid dehydrogenase E1, alpha polypeptide
chr7_-_34196608 0.02 ENSMUST00000148381.1
ENSMUST00000002710.3
programmed cell death 2-like
chr16_+_43889800 0.02 ENSMUST00000132859.1
RIKEN cDNA 2610015P09 gene
chrX_+_56786527 0.02 ENSMUST00000144600.1
four and a half LIM domains 1
chr3_-_101287897 0.02 ENSMUST00000029456.4
CD2 antigen
chr11_-_118290188 0.02 ENSMUST00000106296.2
ENSMUST00000092382.3
ubiquitin specific peptidase 36
chr4_+_123282778 0.02 ENSMUST00000106243.1
ENSMUST00000106241.1
ENSMUST00000080178.6
poly(A) binding protein, cytoplasmic 4
chr1_-_55088024 0.02 ENSMUST00000027123.8
heat shock protein 1 (chaperonin)
chr5_+_45493374 0.02 ENSMUST00000046122.6
leucine aminopeptidase 3
chr6_+_125096145 0.02 ENSMUST00000112390.1
chromodomain helicase DNA binding protein 4
chr4_+_129960760 0.02 ENSMUST00000139884.1
RIKEN cDNA 1700003M07 gene
chr17_-_45573253 0.02 ENSMUST00000165127.1
ENSMUST00000166469.1
ENSMUST00000024739.7
heat shock protein 90 alpha (cytosolic), class B member 1
chr5_-_22344690 0.02 ENSMUST00000062372.7
ENSMUST00000161356.1
reelin
chr7_-_25250720 0.02 ENSMUST00000116343.2
ENSMUST00000045847.8
Ets2 repressor factor
chr7_-_98361310 0.02 ENSMUST00000165257.1
tsukushi
chr18_+_42511496 0.02 ENSMUST00000025375.7
transcription elongation regulator 1 (CA150)
chr16_-_43889669 0.02 ENSMUST00000023387.7
queuine tRNA-ribosyltransferase domain containing 1
chr16_-_92466081 0.02 ENSMUST00000060005.8
regulator of calcineurin 1
chr11_-_101785252 0.02 ENSMUST00000164750.1
ENSMUST00000107176.1
ENSMUST00000017868.6
ets variant gene 4 (E1A enhancer binding protein, E1AF)
chr7_-_46795881 0.02 ENSMUST00000107653.1
ENSMUST00000107654.1
ENSMUST00000014562.7
ENSMUST00000152759.1
Hermansky-Pudlak syndrome 5 homolog (human)
chr17_-_27513341 0.02 ENSMUST00000118161.1
glutamate receptor, metabotropic 4
chr11_+_95666957 0.02 ENSMUST00000125172.1
ENSMUST00000036374.5
prohibitin
chrX_-_48208566 0.02 ENSMUST00000037960.4
zinc finger, DHHC domain containing 9
chr3_-_108210438 0.02 ENSMUST00000117784.1
ENSMUST00000119650.1
ENSMUST00000117409.1
ataxin 7-like 2
chr16_+_20611585 0.02 ENSMUST00000115522.2
ENSMUST00000119224.1
ENSMUST00000079600.4
ENSMUST00000120394.1
endothelin converting enzyme 2
chr7_+_46796088 0.02 ENSMUST00000006774.4
ENSMUST00000165031.1
general transcription factor II H, polypeptide 1
chr13_-_75943812 0.01 ENSMUST00000022078.5
ENSMUST00000109606.1
Rho-related BTB domain containing 3
chr10_+_36974558 0.01 ENSMUST00000105510.1
histone deacetylase 2
chr19_-_41981119 0.01 ENSMUST00000026168.2
ENSMUST00000171561.1
MMS19 (MET18 S. cerevisiae)
chr19_-_29812952 0.01 ENSMUST00000099525.3
RAN binding protein 6
chr11_-_113565740 0.01 ENSMUST00000071539.3
ENSMUST00000106633.3
ENSMUST00000042657.9
ENSMUST00000149034.1
solute carrier family 39 (metal ion transporter), member 11
chr15_-_38078842 0.01 ENSMUST00000110336.2
ubiquitin protein ligase E3 component n-recognin 5
chr11_-_52000748 0.01 ENSMUST00000109086.1
ubiquitin-conjugating enzyme E2B
chr8_+_90828820 0.01 ENSMUST00000109614.2
ENSMUST00000048665.6
chromodomain helicase DNA binding protein 9
chr10_+_36974536 0.01 ENSMUST00000019911.7
histone deacetylase 2
chr5_+_120116480 0.01 ENSMUST00000031590.8
RNA binding motif protein 19
chr11_-_70410010 0.01 ENSMUST00000019065.3
ENSMUST00000135148.1
proline, glutamic acid and leucine rich protein 1
chr5_+_139543889 0.01 ENSMUST00000174792.1
ENSMUST00000031523.8
UNC homeobox
chr4_-_132075250 0.01 ENSMUST00000105970.1
ENSMUST00000105975.1
erythrocyte protein band 4.1
chr12_+_8674681 0.01 ENSMUST00000168361.1
ENSMUST00000169750.1
ENSMUST00000163730.1
pumilio 2 (Drosophila)
chr16_+_43889936 0.01 ENSMUST00000151183.1
RIKEN cDNA 2610015P09 gene
chr2_+_160645881 0.01 ENSMUST00000109468.2
topoisomerase (DNA) I
chr4_-_148444744 0.01 ENSMUST00000051633.2
UbiA prenyltransferase domain containing 1
chr4_+_148591482 0.01 ENSMUST00000006611.8
spermidine synthase
chr15_-_51865448 0.01 ENSMUST00000022925.8
eukaryotic translation initiation factor 3, subunit H
chr17_+_34032348 0.01 ENSMUST00000173354.1
ENSMUST00000116612.2
retinoid X receptor beta
chr5_+_76951307 0.01 ENSMUST00000031160.9
ENSMUST00000120912.1
ENSMUST00000117536.1
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
chr4_-_82705735 0.01 ENSMUST00000155821.1
nuclear factor I/B
chr3_+_135825648 0.01 ENSMUST00000180196.1
solute carrier family 39 (metal ion transporter), member 8
chr16_+_45158725 0.01 ENSMUST00000023343.3
autophagy related 3
chr4_+_44756609 0.01 ENSMUST00000143385.1
zinc finger, CCHC domain containing 7
chr2_-_38926217 0.01 ENSMUST00000076275.4
ENSMUST00000142130.1
nuclear receptor subfamily 6, group A, member 1
chr5_+_93093428 0.01 ENSMUST00000074733.7
septin 11
chr15_-_102625436 0.00 ENSMUST00000184485.1
ENSMUST00000185070.1
ENSMUST00000184616.1
ENSMUST00000108828.2
Cyclic AMP-dependent transcription factor ATF-7
chr6_-_52158292 0.00 ENSMUST00000000964.5
ENSMUST00000120363.1
homeobox A1
chr5_-_76951560 0.00 ENSMUST00000140076.1
phosphoribosyl pyrophosphate amidotransferase
chr6_+_108660772 0.00 ENSMUST00000163617.1
basic helix-loop-helix family, member e40
chr11_+_106789235 0.00 ENSMUST00000103068.3
ENSMUST00000018516.4
centrosomal protein 95
chr5_+_66676098 0.00 ENSMUST00000031131.9
ubiquitin carboxy-terminal hydrolase L1
chr3_+_135825788 0.00 ENSMUST00000167390.1
solute carrier family 39 (metal ion transporter), member 8
chr12_-_31950210 0.00 ENSMUST00000176084.1
ENSMUST00000176103.1
ENSMUST00000167458.2
high mobility group box transcription factor 1
chrX_+_6047453 0.00 ENSMUST00000103007.3
nudix (nucleoside diphosphate linked moiety X)-type motif 11
chr11_-_106216318 0.00 ENSMUST00000002043.3
coiled-coil domain containing 47
chr11_+_106216926 0.00 ENSMUST00000021046.5
DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
chr16_-_45158624 0.00 ENSMUST00000180636.1
solute carrier family 35, member A5
chr12_+_76255209 0.00 ENSMUST00000021443.5
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
chr7_+_127746775 0.00 ENSMUST00000033081.7
F-box and leucine-rich repeat protein 19

Network of associatons between targets according to the STRING database.

First level regulatory network of Clock

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0002842 positive regulation of T cell mediated immune response to tumor cell(GO:0002842) protein import into mitochondrial intermembrane space(GO:0045041)
0.0 0.3 GO:0015816 glycine transport(GO:0015816)
0.0 0.1 GO:0039534 negative regulation of MDA-5 signaling pathway(GO:0039534)
0.0 0.1 GO:0015015 heparan sulfate proteoglycan biosynthetic process, enzymatic modification(GO:0015015)
0.0 0.1 GO:0048254 snoRNA localization(GO:0048254)
0.0 0.1 GO:0015819 lysine transport(GO:0015819) ornithine transport(GO:0015822)
0.0 0.0 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.1 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.0 GO:0051794 endocardial cushion fusion(GO:0003274) apoptotic process involved in outflow tract morphogenesis(GO:0003275) regulation of catagen(GO:0051794) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0031084 BLOC-2 complex(GO:0031084)
0.0 0.1 GO:0043259 laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259)
0.0 0.0 GO:0008537 proteasome activator complex(GO:0008537)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0015187 glycine transmembrane transporter activity(GO:0015187)
0.0 0.1 GO:0017095 heparan sulfate 6-O-sulfotransferase activity(GO:0017095)
0.0 0.0 GO:0004998 transferrin receptor activity(GO:0004998)
0.0 0.1 GO:0005008 hepatocyte growth factor-activated receptor activity(GO:0005008)
0.0 0.1 GO:0015189 L-ornithine transmembrane transporter activity(GO:0000064) L-lysine transmembrane transporter activity(GO:0015189)
0.0 0.1 GO:0030984 kininogen binding(GO:0030984)
0.0 0.0 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.0 0.0 GO:0070573 metallodipeptidase activity(GO:0070573)
0.0 0.1 GO:0001094 TFIID-class transcription factor binding(GO:0001094)
0.0 0.1 GO:0034186 apolipoprotein A-I binding(GO:0034186)