12D miR HR13_24
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Hoxb1
|
ENSMUSG00000018973.2 | homeobox B1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxb1 | mm10_v2_chr11_+_96365752_96365752 | 0.74 | 8.6e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_+_65890237 | 1.42 |
ENSMUST00000045802.6
|
2810417H13Rik
|
RIKEN cDNA 2810417H13 gene |
chrX_+_110814390 | 1.13 |
ENSMUST00000078229.3
|
Pou3f4
|
POU domain, class 3, transcription factor 4 |
chr4_-_91399984 | 1.10 |
ENSMUST00000102799.3
|
Elavl2
|
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) |
chr8_-_105471481 | 0.84 |
ENSMUST00000014990.6
|
Tppp3
|
tubulin polymerization-promoting protein family member 3 |
chr7_+_73391160 | 0.82 |
ENSMUST00000128471.1
|
Rgma
|
RGM domain family, member A |
chr19_-_41743665 | 0.80 |
ENSMUST00000025993.3
|
Slit1
|
slit homolog 1 (Drosophila) |
chr1_-_119053339 | 0.72 |
ENSMUST00000161301.1
ENSMUST00000161451.1 ENSMUST00000162607.1 |
Gli2
|
GLI-Kruppel family member GLI2 |
chr6_-_136875794 | 0.56 |
ENSMUST00000032342.1
|
Mgp
|
matrix Gla protein |
chr3_-_88762244 | 0.49 |
ENSMUST00000183267.1
|
Syt11
|
synaptotagmin XI |
chrX_+_166344692 | 0.44 |
ENSMUST00000112223.1
ENSMUST00000112224.1 ENSMUST00000112229.2 ENSMUST00000112228.1 ENSMUST00000112227.2 ENSMUST00000112226.2 |
Gpm6b
|
glycoprotein m6b |
chr1_-_119053619 | 0.43 |
ENSMUST00000062483.8
|
Gli2
|
GLI-Kruppel family member GLI2 |
chr10_+_127677064 | 0.38 |
ENSMUST00000118612.1
ENSMUST00000048099.4 |
Tmem194
|
transmembrane protein 194 |
chr7_+_48789003 | 0.36 |
ENSMUST00000118927.1
ENSMUST00000125280.1 |
Zdhhc13
|
zinc finger, DHHC domain containing 13 |
chr10_-_88605017 | 0.36 |
ENSMUST00000119185.1
ENSMUST00000121629.1 |
Mybpc1
|
myosin binding protein C, slow-type |
chr5_+_37735519 | 0.35 |
ENSMUST00000073554.3
|
Cytl1
|
cytokine-like 1 |
chr2_+_124610573 | 0.34 |
ENSMUST00000103239.3
ENSMUST00000103240.2 |
Sema6d
|
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D |
chr7_-_78577771 | 0.33 |
ENSMUST00000039438.7
|
Ntrk3
|
neurotrophic tyrosine kinase, receptor, type 3 |
chr5_+_42067960 | 0.32 |
ENSMUST00000087332.4
|
Gm16223
|
predicted gene 16223 |
chr18_-_56562187 | 0.32 |
ENSMUST00000171844.2
|
Aldh7a1
|
aldehyde dehydrogenase family 7, member A1 |
chr14_-_69284982 | 0.31 |
ENSMUST00000183882.1
ENSMUST00000037064.4 |
Slc25a37
|
solute carrier family 25, member 37 |
chr10_-_127666673 | 0.30 |
ENSMUST00000026469.2
|
Nab2
|
Ngfi-A binding protein 2 |
chr3_+_58525821 | 0.30 |
ENSMUST00000029387.8
|
Eif2a
|
eukaryotic translation initiation factor 2A |
chr10_+_38965515 | 0.30 |
ENSMUST00000019992.5
|
Lama4
|
laminin, alpha 4 |
chr10_-_127666598 | 0.30 |
ENSMUST00000099157.3
|
Nab2
|
Ngfi-A binding protein 2 |
chr19_+_4003334 | 0.29 |
ENSMUST00000025806.3
|
Doc2g
|
double C2, gamma |
chr11_-_98022594 | 0.28 |
ENSMUST00000103144.3
ENSMUST00000017552.6 ENSMUST00000092736.4 ENSMUST00000107562.1 |
Cacnb1
|
calcium channel, voltage-dependent, beta 1 subunit |
chr7_+_101321703 | 0.28 |
ENSMUST00000174291.1
ENSMUST00000167888.2 ENSMUST00000172662.1 ENSMUST00000173270.1 ENSMUST00000174083.1 |
Stard10
|
START domain containing 10 |
chr3_+_58526303 | 0.28 |
ENSMUST00000138848.1
|
Eif2a
|
eukaryotic translation initiation factor 2A |
chr1_-_135688094 | 0.27 |
ENSMUST00000112103.1
|
Nav1
|
neuron navigator 1 |
chr3_-_7613427 | 0.26 |
ENSMUST00000168269.2
|
Il7
|
interleukin 7 |
chr2_+_84840612 | 0.26 |
ENSMUST00000111625.1
|
Slc43a1
|
solute carrier family 43, member 1 |
chr2_+_147012996 | 0.26 |
ENSMUST00000028921.5
|
Xrn2
|
5'-3' exoribonuclease 2 |
chr12_+_38780284 | 0.25 |
ENSMUST00000162563.1
ENSMUST00000161164.1 ENSMUST00000160996.1 |
Etv1
|
ets variant gene 1 |
chr1_+_127306706 | 0.25 |
ENSMUST00000171405.1
|
Mgat5
|
mannoside acetylglucosaminyltransferase 5 |
chr7_-_45466894 | 0.25 |
ENSMUST00000033093.8
|
Bax
|
BCL2-associated X protein |
chr18_-_56562215 | 0.22 |
ENSMUST00000170309.1
|
Aldh7a1
|
aldehyde dehydrogenase family 7, member A1 |
chr18_+_56562443 | 0.22 |
ENSMUST00000130163.1
ENSMUST00000132628.1 |
Phax
|
phosphorylated adaptor for RNA export |
chr18_+_42511496 | 0.22 |
ENSMUST00000025375.7
|
Tcerg1
|
transcription elongation regulator 1 (CA150) |
chr8_-_83458386 | 0.20 |
ENSMUST00000081506.3
|
Scoc
|
short coiled-coil protein |
chr2_+_124610278 | 0.17 |
ENSMUST00000051419.8
ENSMUST00000077847.5 ENSMUST00000078621.5 ENSMUST00000076335.5 |
Sema6d
|
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D |
chr10_+_4266323 | 0.17 |
ENSMUST00000045730.5
|
Akap12
|
A kinase (PRKA) anchor protein (gravin) 12 |
chr1_+_153665274 | 0.17 |
ENSMUST00000152114.1
ENSMUST00000111812.1 |
Rgs8
|
regulator of G-protein signaling 8 |
chr4_+_109235632 | 0.16 |
ENSMUST00000030285.7
|
Calr4
|
calreticulin 4 |
chr18_-_56562261 | 0.16 |
ENSMUST00000066208.6
ENSMUST00000172734.1 |
Aldh7a1
|
aldehyde dehydrogenase family 7, member A1 |
chr14_+_70555900 | 0.16 |
ENSMUST00000163060.1
|
Hr
|
hairless |
chr8_-_87959560 | 0.14 |
ENSMUST00000109655.2
|
Zfp423
|
zinc finger protein 423 |
chr8_-_117082449 | 0.13 |
ENSMUST00000098375.4
ENSMUST00000109093.2 |
Pkd1l2
|
polycystic kidney disease 1 like 2 |
chr11_+_96351632 | 0.13 |
ENSMUST00000100523.5
|
Hoxb2
|
homeobox B2 |
chr10_+_67185730 | 0.12 |
ENSMUST00000173689.1
|
Jmjd1c
|
jumonji domain containing 1C |
chr7_-_97417730 | 0.11 |
ENSMUST00000043077.7
|
Thrsp
|
thyroid hormone responsive |
chr15_+_74516196 | 0.09 |
ENSMUST00000042035.9
|
Bai1
|
brain-specific angiogenesis inhibitor 1 |
chr1_-_45503282 | 0.08 |
ENSMUST00000086430.4
|
Col5a2
|
collagen, type V, alpha 2 |
chr4_-_103114555 | 0.08 |
ENSMUST00000106868.3
|
Wdr78
|
WD repeat domain 78 |
chr9_-_91365778 | 0.08 |
ENSMUST00000065360.3
|
Zic1
|
zinc finger protein of the cerebellum 1 |
chr5_+_139543889 | 0.07 |
ENSMUST00000174792.1
ENSMUST00000031523.8 |
Uncx
|
UNC homeobox |
chr1_+_178798438 | 0.07 |
ENSMUST00000160789.1
|
Kif26b
|
kinesin family member 26B |
chr15_+_89253035 | 0.07 |
ENSMUST00000088788.3
|
Ppp6r2
|
protein phosphatase 6, regulatory subunit 2 |
chr2_+_65845833 | 0.07 |
ENSMUST00000053910.3
|
Csrnp3
|
cysteine-serine-rich nuclear protein 3 |
chr11_-_69549108 | 0.06 |
ENSMUST00000108659.1
|
Dnah2
|
dynein, axonemal, heavy chain 2 |
chr9_-_91365756 | 0.06 |
ENSMUST00000034927.6
|
Zic1
|
zinc finger protein of the cerebellum 1 |
chr17_+_26941420 | 0.06 |
ENSMUST00000081285.3
ENSMUST00000177932.1 |
Syngap1
|
synaptic Ras GTPase activating protein 1 homolog (rat) |
chr4_-_145315143 | 0.06 |
ENSMUST00000030339.6
|
Tnfrsf8
|
tumor necrosis factor receptor superfamily, member 8 |
chr4_+_109235413 | 0.06 |
ENSMUST00000106628.1
|
Calr4
|
calreticulin 4 |
chr6_-_87533219 | 0.05 |
ENSMUST00000113637.2
ENSMUST00000071024.6 |
Arhgap25
|
Rho GTPase activating protein 25 |
chr2_-_148045891 | 0.05 |
ENSMUST00000109964.1
|
Foxa2
|
forkhead box A2 |
chr16_+_25801907 | 0.04 |
ENSMUST00000040231.6
ENSMUST00000115306.1 ENSMUST00000115304.1 ENSMUST00000115305.1 |
Trp63
|
transformation related protein 63 |
chr8_+_84901928 | 0.03 |
ENSMUST00000067060.7
|
Klf1
|
Kruppel-like factor 1 (erythroid) |
chr12_-_27160311 | 0.03 |
ENSMUST00000182473.1
ENSMUST00000177636.1 ENSMUST00000183238.1 |
Gm9866
|
predicted gene 9866 |
chr15_-_95528702 | 0.03 |
ENSMUST00000166170.1
|
Nell2
|
NEL-like 2 |
chr7_+_123982799 | 0.03 |
ENSMUST00000106437.1
|
Hs3st4
|
heparan sulfate (glucosamine) 3-O-sulfotransferase 4 |
chr7_+_102774495 | 0.03 |
ENSMUST00000098217.2
|
Olfr561
|
olfactory receptor 561 |
chr15_-_73819410 | 0.02 |
ENSMUST00000110021.2
|
Mroh5
|
maestro heat-like repeat family member 5 |
chr4_-_103114238 | 0.01 |
ENSMUST00000036451.8
ENSMUST00000036557.8 |
Wdr78
|
WD repeat domain 78 |
chr12_-_27160498 | 0.01 |
ENSMUST00000182592.1
|
Gm9866
|
predicted gene 9866 |
chr3_-_65958236 | 0.00 |
ENSMUST00000029416.7
|
Ccnl1
|
cyclin L1 |
chr6_+_142413441 | 0.00 |
ENSMUST00000088263.4
|
B230216G23Rik
|
RIKEN cDNA B230216G23 gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 1.1 | GO:0060032 | notochord regression(GO:0060032) |
0.2 | 0.5 | GO:1990927 | calcium ion regulated lysosome exocytosis(GO:1990927) |
0.1 | 0.8 | GO:0033563 | dorsal/ventral axon guidance(GO:0033563) |
0.1 | 0.6 | GO:1990928 | response to amino acid starvation(GO:1990928) |
0.1 | 0.6 | GO:0016480 | negative regulation of transcription from RNA polymerase III promoter(GO:0016480) |
0.1 | 0.3 | GO:0048687 | positive regulation of sprouting of injured axon(GO:0048687) positive regulation of axon extension involved in regeneration(GO:0048691) |
0.1 | 0.2 | GO:1902445 | B cell negative selection(GO:0002352) regulation of mitochondrial membrane permeability involved in programmed necrotic cell death(GO:1902445) |
0.1 | 1.1 | GO:2001054 | negative regulation of mesenchymal cell apoptotic process(GO:2001054) |
0.1 | 0.2 | GO:0051030 | snRNA transport(GO:0051030) |
0.1 | 0.4 | GO:0051581 | negative regulation of neurotransmitter uptake(GO:0051581) negative regulation of serotonin uptake(GO:0051612) |
0.1 | 0.8 | GO:1900121 | negative regulation of receptor binding(GO:1900121) |
0.1 | 0.3 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
0.0 | 0.3 | GO:0035360 | positive regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035360) |
0.0 | 0.1 | GO:0021570 | rhombomere 4 development(GO:0021570) |
0.0 | 0.4 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.0 | 0.0 | GO:1904672 | regulation of somatic stem cell population maintenance(GO:1904672) |
0.0 | 0.1 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.0 | 0.3 | GO:0048934 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.0 | 0.2 | GO:0061635 | regulation of protein complex stability(GO:0061635) |
0.0 | 0.2 | GO:0010739 | positive regulation of protein kinase A signaling(GO:0010739) |
0.0 | 0.0 | GO:0045013 | carbon catabolite repression of transcription(GO:0045013) negative regulation of transcription by glucose(GO:0045014) |
0.0 | 0.5 | GO:0014912 | negative regulation of smooth muscle cell migration(GO:0014912) |
0.0 | 0.4 | GO:0050650 | chondroitin sulfate proteoglycan biosynthetic process(GO:0050650) |
0.0 | 0.2 | GO:0060159 | G-protein coupled acetylcholine receptor signaling pathway(GO:0007213) regulation of dopamine receptor signaling pathway(GO:0060159) |
0.0 | 0.1 | GO:0072092 | ureteric bud invasion(GO:0072092) |
0.0 | 0.3 | GO:0033169 | histone H3-K9 demethylation(GO:0033169) |
0.0 | 1.1 | GO:0001578 | microtubule bundle formation(GO:0001578) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | GO:0097542 | ciliary tip(GO:0097542) |
0.1 | 0.8 | GO:0097427 | microtubule bundle(GO:0097427) |
0.1 | 0.6 | GO:0005850 | eukaryotic translation initiation factor 2 complex(GO:0005850) |
0.0 | 0.5 | GO:0048787 | presynaptic active zone membrane(GO:0048787) |
0.0 | 0.1 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.0 | 0.2 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.0 | 0.3 | GO:0046581 | intercellular canaliculus(GO:0046581) |
0.0 | 0.4 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 0.3 | GO:0005605 | basal lamina(GO:0005605) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.7 | GO:0008802 | betaine-aldehyde dehydrogenase activity(GO:0008802) |
0.1 | 0.8 | GO:0048495 | Roundabout binding(GO:0048495) |
0.1 | 0.3 | GO:0004534 | transcription termination site sequence-specific DNA binding(GO:0001147) transcription termination site DNA binding(GO:0001160) 5'-3' exoribonuclease activity(GO:0004534) |
0.1 | 1.1 | GO:0003680 | AT DNA binding(GO:0003680) |
0.1 | 0.8 | GO:1990459 | transferrin receptor binding(GO:1990459) |
0.1 | 0.3 | GO:0005030 | neurotrophin receptor activity(GO:0005030) |
0.0 | 0.2 | GO:0030144 | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144) |
0.0 | 0.5 | GO:0030215 | semaphorin receptor binding(GO:0030215) |
0.0 | 1.1 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.0 | 0.3 | GO:0015093 | ferrous iron transmembrane transporter activity(GO:0015093) |
0.0 | 0.2 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.0 | 0.4 | GO:0097493 | structural molecule activity conferring elasticity(GO:0097493) |
0.0 | 0.4 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
0.0 | 0.3 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
0.0 | 0.6 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 0.2 | GO:0015643 | toxic substance binding(GO:0015643) |
0.0 | 0.3 | GO:0032454 | histone demethylase activity (H3-K9 specific)(GO:0032454) |
0.0 | 0.6 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.0 | 0.5 | GO:0031369 | translation initiation factor binding(GO:0031369) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.8 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 0.2 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.6 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.6 | PID TCPTP PATHWAY | Signaling events mediated by TCPTP |
0.0 | 0.8 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.0 | 0.5 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.3 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.0 | 0.2 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |