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12D miR HR13_24

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Results for Zkscan3

Z-value: 0.73

Motif logo

Transcription factors associated with Zkscan3

Gene Symbol Gene ID Gene Info
ENSMUSG00000021327.12 zinc finger with KRAB and SCAN domains 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Zkscan3mm10_v2_chr13_-_21402688_214027550.402.2e-01Click!

Activity profile of Zkscan3 motif

Sorted Z-values of Zkscan3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr13_-_100786402 2.05 ENSMUST00000174038.1
ENSMUST00000091295.7
ENSMUST00000072119.8
cyclin B1
chr5_+_120649188 1.88 ENSMUST00000156722.1
RAS protein activator like 1 (GAP1 like)
chr7_+_19518731 1.31 ENSMUST00000078908.4
NTPase, KAP family P-loop domain containing 1
chr5_-_100572192 1.28 ENSMUST00000031264.5
placenta-specific 8
chr11_-_75422586 1.03 ENSMUST00000138661.1
ENSMUST00000000769.7
serine (or cysteine) peptidase inhibitor, clade F, member 1
chr1_-_65123108 0.98 ENSMUST00000050047.3
ENSMUST00000148020.1
RIKEN cDNA D630023F18 gene
chr16_-_38433145 0.77 ENSMUST00000002926.6
phospholipase A1 member A
chr6_+_71199827 0.77 ENSMUST00000067492.7
fatty acid binding protein 1, liver
chr8_+_106893616 0.74 ENSMUST00000047629.5
cirrhosis, autosomal recessive 1A (human)
chr12_+_112588753 0.67 ENSMUST00000101029.2
inverted formin, FH2 and WH2 domain containing
chr8_+_70616816 0.63 ENSMUST00000052437.3
leucine rich repeat containing 25
chr1_+_132298606 0.63 ENSMUST00000046071.4
kelch domain containing 8A
chr19_-_10869757 0.63 ENSMUST00000120524.1
ENSMUST00000025645.7
transmembrane protein 132A
chr14_+_51893610 0.59 ENSMUST00000047726.5
ENSMUST00000161888.1
solute carrier family 39 (zinc transporter), member 2
chr13_-_32851176 0.54 ENSMUST00000091668.5
ENSMUST00000076352.6
serine (or cysteine) peptidase inhibitor, clade B, member 1a
chr13_-_38658991 0.53 ENSMUST00000001757.7
eukaryotic translation elongation factor 1 epsilon 1
chr11_-_75422524 0.53 ENSMUST00000125982.1
ENSMUST00000137103.1
serine (or cysteine) peptidase inhibitor, clade F, member 1
chr3_+_79629074 0.48 ENSMUST00000029388.8
RIKEN cDNA 4930579G24 gene
chr11_-_100650693 0.47 ENSMUST00000103119.3
zinc finger protein 385C
chrX_-_75874536 0.39 ENSMUST00000033547.7
plastin 3 (T-isoform)
chr2_+_118772766 0.38 ENSMUST00000130293.1
ENSMUST00000061360.3
proline/histidine/glycine-rich 1
chr1_-_173333503 0.38 ENSMUST00000038227.4
Duffy blood group, chemokine receptor
chr2_+_156613664 0.37 ENSMUST00000169464.2
ENSMUST00000109567.3
discs, large homolog-associated protein 4 (Drosophila)
chr2_+_31670714 0.37 ENSMUST00000038474.7
ENSMUST00000137156.1
exosome component 2
chr12_-_69724830 0.37 ENSMUST00000021370.8
L-2-hydroxyglutarate dehydrogenase
chr6_-_97459279 0.36 ENSMUST00000113359.1
FERM domain containing 4B
chr5_+_122643878 0.30 ENSMUST00000100737.3
ENSMUST00000121489.1
ENSMUST00000031425.8
ENSMUST00000086247.5
purinergic receptor P2X, ligand-gated ion channel, 7
chr11_-_88851462 0.29 ENSMUST00000107903.1
A kinase (PRKA) anchor protein 1
chr1_+_135232045 0.28 ENSMUST00000110798.3
predicted gene 4204
chr13_+_73467197 0.28 ENSMUST00000022099.8
lysophosphatidylcholine acyltransferase 1
chr10_+_75568648 0.27 ENSMUST00000134503.1
ENSMUST00000125770.1
ENSMUST00000128886.1
ENSMUST00000151212.1
gamma-glutamyltransferase 1
chr7_-_81345189 0.27 ENSMUST00000080813.4
ribosomal protein S17
chr17_-_34517352 0.26 ENSMUST00000075483.4
butyrophilin-like 6
chr2_+_121295437 0.26 ENSMUST00000110639.1
microtubule-associated protein 1 A
chr17_-_35673517 0.26 ENSMUST00000162266.1
ENSMUST00000160734.1
ENSMUST00000159852.1
ENSMUST00000160039.1
general transcription factor II H, polypeptide 4
chr7_+_19411086 0.26 ENSMUST00000003643.1
creatine kinase, muscle
chr8_+_31091593 0.23 ENSMUST00000161713.1
dual specificity phosphatase 26 (putative)
chr7_+_126759601 0.23 ENSMUST00000050201.4
ENSMUST00000057669.9
mitogen-activated protein kinase 3
chr9_+_114688782 0.21 ENSMUST00000047404.6
dynein cytoplasmic 1 light intermediate chain 1
chr18_+_67800101 0.21 ENSMUST00000025425.5
centrosomal protein 192
chr2_+_155775333 0.20 ENSMUST00000029141.5
matrix metallopeptidase 24
chr17_-_34475937 0.20 ENSMUST00000065841.4
butyrophilin-like 4
chr1_+_37997975 0.20 ENSMUST00000027252.7
eukaryotic translation initiation factor 5B
chr4_+_156026120 0.20 ENSMUST00000103173.3
tumor necrosis factor receptor superfamily, member 18
chr4_+_156026304 0.20 ENSMUST00000040274.7
ENSMUST00000122001.1
tumor necrosis factor receptor superfamily, member 18
chr6_-_122856151 0.19 ENSMUST00000042081.8
complement component 3a receptor 1
chr11_+_87405049 0.19 ENSMUST00000060835.5
testis expressed gene 14
chr6_+_127453667 0.19 ENSMUST00000112193.1
poly (ADP-ribose) polymerase family, member 11
chr10_+_80629646 0.18 ENSMUST00000085435.5
casein kinase 1, gamma 2
chr1_-_40790642 0.17 ENSMUST00000039672.5
major facilitator superfamily domain containing 9
chr2_-_30194112 0.16 ENSMUST00000113659.1
ENSMUST00000113660.1
cysteine conjugate-beta lyase 1
chr7_+_101896340 0.16 ENSMUST00000035395.7
ENSMUST00000106973.1
ENSMUST00000144207.1
anaphase prompoting complex C subunit 15
chr9_+_108648720 0.15 ENSMUST00000098384.2
predicted gene 10621
chr13_-_104109576 0.14 ENSMUST00000109315.3
neurolysin (metallopeptidase M3 family)
chr1_+_131638485 0.14 ENSMUST00000112411.1
cathepsin E
chr17_+_46110982 0.14 ENSMUST00000024763.3
ENSMUST00000123646.1
mitochondrial ribosomal protein S18A
chr2_+_32646586 0.13 ENSMUST00000009705.7
ENSMUST00000167841.1
endoglin
chr4_+_139192899 0.13 ENSMUST00000102508.3
ENSMUST00000131912.1
ENSMUST00000102507.3
capping protein (actin filament) muscle Z-line, beta
chr6_+_125552948 0.13 ENSMUST00000112254.1
ENSMUST00000112253.1
ENSMUST00000001995.7
Von Willebrand factor homolog
chr10_-_33951190 0.12 ENSMUST00000048222.4
zinc finger with UFM1-specific peptidase domain
chr7_-_98178254 0.12 ENSMUST00000040971.7
calpain 5
chr13_+_44730726 0.12 ENSMUST00000173704.1
ENSMUST00000044608.7
ENSMUST00000173367.1
jumonji, AT rich interactive domain 2
chr18_+_61105844 0.12 ENSMUST00000115268.3
colony stimulating factor 1 receptor
chr1_+_131638306 0.12 ENSMUST00000073350.6
cathepsin E
chr7_-_127020321 0.11 ENSMUST00000032918.2
PAXIP1 associated glutamate rich protein 1A
chr8_-_70760889 0.10 ENSMUST00000038626.8
MPV17 mitochondrial membrane protein-like 2
chr12_+_69724939 0.10 ENSMUST00000021372.5
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s
chr10_+_81328719 0.09 ENSMUST00000105325.2
thromboxane A2 receptor
chr16_-_16359016 0.09 ENSMUST00000023477.7
ENSMUST00000096229.3
ENSMUST00000115749.1
dynamin 1-like
chr17_-_24150910 0.08 ENSMUST00000052462.6
3-phosphoinositide dependent protein kinase 1
chr18_-_34651703 0.08 ENSMUST00000025228.5
ENSMUST00000133181.1
CDC23 cell division cycle 23
chr8_-_106893515 0.08 ENSMUST00000176090.1
CTF8, chromosome transmission fidelity factor 8
chr10_+_75568630 0.08 ENSMUST00000145928.1
gamma-glutamyltransferase 1
chr14_-_32685246 0.07 ENSMUST00000096038.3
RIKEN cDNA 3425401B19 gene
chr17_-_35673738 0.07 ENSMUST00000001565.8
general transcription factor II H, polypeptide 4
chr8_-_106893581 0.06 ENSMUST00000176437.1
ENSMUST00000177068.1
ENSMUST00000169312.1
ENSMUST00000176515.1
CTF8, chromosome transmission fidelity factor 8
chr11_-_102365111 0.06 ENSMUST00000006749.9
solute carrier family 4 (anion exchanger), member 1
chr5_-_88675613 0.05 ENSMUST00000113234.1
ENSMUST00000153565.1
G-rich RNA sequence binding factor 1
chr10_+_89744988 0.05 ENSMUST00000020112.5
UHRF1 (ICBP90) binding protein 1-like
chr3_-_95687846 0.05 ENSMUST00000015994.3
ENSMUST00000148854.1
ENSMUST00000117782.1
ADAMTS-like 4
chr8_-_111691002 0.04 ENSMUST00000034435.5
chymotrypsinogen B1
chr5_+_117976761 0.03 ENSMUST00000035579.6
F-box protein 21
chr8_+_33732237 0.03 ENSMUST00000171010.1
general transcription factor II E, polypeptide 2 (beta subunit)
chr19_+_6276725 0.03 ENSMUST00000025684.3
EH-domain containing 1
chr11_+_115912001 0.02 ENSMUST00000132961.1
small integral membrane protein 6
chr8_+_71396853 0.02 ENSMUST00000002473.8
BRISC and BRCA1 A complex member 1
chr10_+_75568641 0.01 ENSMUST00000131565.1
gamma-glutamyltransferase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of Zkscan3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0031660 regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031660) positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031662)
0.1 1.6 GO:0060770 negative regulation of epithelial cell proliferation involved in prostate gland development(GO:0060770)
0.1 0.3 GO:0050717 positive regulation of interleukin-1 alpha secretion(GO:0050717) regulation of bleb assembly(GO:1904170)
0.1 0.4 GO:0071043 CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 0.3 GO:0045062 extrathymic T cell selection(GO:0045062)
0.1 0.2 GO:1902310 positive regulation of peptidyl-serine dephosphorylation(GO:1902310)
0.1 0.5 GO:2000774 positive regulation of cellular senescence(GO:2000774)
0.1 1.9 GO:1903861 positive regulation of dendrite extension(GO:1903861)
0.1 0.3 GO:2001245 regulation of phosphatidylcholine biosynthetic process(GO:2001245)
0.1 0.8 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000)
0.0 0.1 GO:1902809 regulation of skeletal muscle fiber differentiation(GO:1902809)
0.0 0.4 GO:1901748 leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750)
0.0 0.1 GO:0003032 detection of oxygen(GO:0003032) cardiac jelly development(GO:1905072)
0.0 0.2 GO:0002461 complement receptor mediated signaling pathway(GO:0002430) tolerance induction dependent upon immune response(GO:0002461)
0.0 0.2 GO:0000189 MAPK import into nucleus(GO:0000189)
0.0 0.3 GO:0051534 negative regulation of NFAT protein import into nucleus(GO:0051534)
0.0 1.3 GO:0040015 negative regulation of multicellular organism growth(GO:0040015)
0.0 0.4 GO:1903504 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.0 0.1 GO:1904578 response to thapsigargin(GO:1904578) cellular response to thapsigargin(GO:1904579)
0.0 0.2 GO:0032466 negative regulation of cytokinesis(GO:0032466)
0.0 0.7 GO:0090140 regulation of mitochondrial fission(GO:0090140)
0.0 0.1 GO:0038145 macrophage colony-stimulating factor signaling pathway(GO:0038145)
0.0 0.1 GO:0061668 mitochondrial ribosome assembly(GO:0061668)
0.0 0.3 GO:0016540 protein autoprocessing(GO:0016540)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.1 GO:1900264 regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264)
0.0 0.6 GO:0006829 zinc II ion transport(GO:0006829)
0.0 0.4 GO:0051639 actin filament network formation(GO:0051639)
0.0 0.2 GO:0044331 cell-cell adhesion mediated by cadherin(GO:0044331)
0.0 0.1 GO:0071557 histone H3-K27 demethylation(GO:0071557)
0.0 0.1 GO:0051490 negative regulation of filopodium assembly(GO:0051490)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.1 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.0 0.2 GO:0046599 regulation of centriole replication(GO:0046599)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 GO:0000942 condensed nuclear chromosome outer kinetochore(GO:0000942)
0.1 1.9 GO:0031235 intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235)
0.1 1.6 GO:0043203 axon hillock(GO:0043203)
0.1 0.3 GO:0000438 core TFIIH complex portion of holo TFIIH complex(GO:0000438)
0.1 0.8 GO:0045179 apical cortex(GO:0045179)
0.0 0.1 GO:1990682 CSF1-CSF1R complex(GO:1990682)
0.0 0.4 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.5 GO:0017101 aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
0.0 0.1 GO:0071203 WASH complex(GO:0071203)
0.0 0.3 GO:0031229 integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229)
0.0 0.3 GO:0030061 mitochondrial crista(GO:0030061)
0.0 0.5 GO:0002080 acrosomal membrane(GO:0002080)
0.0 0.1 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.0 0.1 GO:0033093 Weibel-Palade body(GO:0033093)
0.0 0.2 GO:0031143 pseudopodium(GO:0031143)
0.0 0.0 GO:0005673 transcription factor TFIIE complex(GO:0005673)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.1 0.8 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.8 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.1 0.3 GO:0047192 1-alkylglycerophosphocholine O-acetyltransferase activity(GO:0047192)
0.1 0.2 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.3 GO:0004111 creatine kinase activity(GO:0004111)
0.0 0.3 GO:0035381 extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381)
0.0 0.4 GO:0036374 glutathione hydrolase activity(GO:0036374)
0.0 0.2 GO:0004875 complement receptor activity(GO:0004875)
0.0 0.1 GO:0070012 oligopeptidase activity(GO:0070012)
0.0 0.3 GO:0030346 protein phosphatase 2B binding(GO:0030346)
0.0 0.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.1 GO:0005534 galactose binding(GO:0005534)
0.0 1.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.2 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.4 GO:0005035 tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.0 0.2 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 0.5 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.9 ST GA12 PATHWAY G alpha 12 Pathway
0.0 2.0 PID FOXM1 PATHWAY FOXM1 transcription factor network
0.0 0.2 PID TCR RAS PATHWAY Ras signaling in the CD4+ TCR pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.0 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.4 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0 0.6 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.0 0.3 REACTOME THE NLRP3 INFLAMMASOME Genes involved in The NLRP3 inflammasome
0.0 0.5 REACTOME CYTOSOLIC TRNA AMINOACYLATION Genes involved in Cytosolic tRNA aminoacylation
0.0 0.2 REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING Genes involved in Advanced glycosylation endproduct receptor signaling
0.0 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.3 REACTOME ACYL CHAIN REMODELLING OF PG Genes involved in Acyl chain remodelling of PG