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12D miR HR13_24

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Results for Foxd3

Z-value: 0.87

Motif logo

Transcription factors associated with Foxd3

Gene Symbol Gene ID Gene Info
ENSMUSG00000067261.3 forkhead box D3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Foxd3mm10_v2_chr4_+_99656299_996563400.624.2e-02Click!

Activity profile of Foxd3 motif

Sorted Z-values of Foxd3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_103904887 3.92 ENSMUST00000074051.5
serine (or cysteine) peptidase inhibitor, clade A, member 1C
chr12_-_103738158 3.45 ENSMUST00000095450.4
serine (or cysteine) preptidase inhibitor, clade A, member 1B
chr12_-_103956891 3.37 ENSMUST00000085054.4
serine (or cysteine) peptidase inhibitor, clade A, member 1E
chr12_-_103773592 3.27 ENSMUST00000078869.5
serine (or cysteine) peptidase inhibitor, clade A, member 1D
chr5_-_107687990 1.28 ENSMUST00000180428.1
predicted gene, 26692
chr5_-_31295862 1.00 ENSMUST00000041266.7
ENSMUST00000172435.1
fibronectin type III domain containing 4
chr4_-_137785371 0.93 ENSMUST00000133473.1
alkaline phosphatase, liver/bone/kidney
chr2_+_181767040 0.89 ENSMUST00000108756.1
myelin transcription factor 1
chr1_+_6734827 0.88 ENSMUST00000139838.1
suppression of tumorigenicity 18
chr11_-_75439489 0.86 ENSMUST00000043696.2
serine (or cysteine) peptidase inhibitor, clade F, member 2
chr2_+_181767283 0.86 ENSMUST00000108757.2
myelin transcription factor 1
chr9_+_36832684 0.80 ENSMUST00000034630.8
fasciculation and elongation protein zeta 1 (zygin I)
chr3_+_102010138 0.78 ENSMUST00000066187.4
nescient helix loop helix 2
chrX_+_164373363 0.78 ENSMUST00000033751.7
c-fos induced growth factor
chr2_+_131950855 0.74 ENSMUST00000110170.1
ENSMUST00000110172.2
ENSMUST00000110171.2
prion protein dublet
chr4_+_108847827 0.71 ENSMUST00000102738.2
KTI12 homolog, chromatin associated (S. cerevisiae)
chr9_-_119209096 0.61 ENSMUST00000084797.4
solute carrier family 22 (organic cation transporter), member 13
chr14_+_101840501 0.59 ENSMUST00000159026.1
LIM domain only 7
chr10_-_127030789 0.58 ENSMUST00000120547.1
ENSMUST00000152054.1
Ts translation elongation factor, mitochondrial
chr1_+_88406956 0.55 ENSMUST00000027518.5
secreted phosphoprotein 2
chrX_+_153126897 0.54 ENSMUST00000163801.1
forkhead box R2
chr2_+_131951011 0.54 ENSMUST00000110169.1
prion protein dublet
chr1_+_53061637 0.52 ENSMUST00000027269.5
myostatin
chr10_-_127030813 0.52 ENSMUST00000040560.4
Ts translation elongation factor, mitochondrial
chr2_-_17460610 0.51 ENSMUST00000145492.1
nebulette
chr2_-_45110336 0.50 ENSMUST00000028229.6
ENSMUST00000152232.1
zinc finger E-box binding homeobox 2
chr11_+_78920787 0.50 ENSMUST00000018610.6
nitric oxide synthase 2, inducible
chr3_-_83049797 0.44 ENSMUST00000048246.3
fibrinogen beta chain
chr5_-_120612558 0.44 ENSMUST00000140554.1
ENSMUST00000031599.2
ENSMUST00000177800.1
RIKEN cDNA 1110008J03 gene
chr14_+_101840602 0.43 ENSMUST00000159314.1
LIM domain only 7
chr4_-_82850721 0.43 ENSMUST00000139401.1
zinc finger, DHHC domain containing 21
chr10_-_88605017 0.43 ENSMUST00000119185.1
ENSMUST00000121629.1
myosin binding protein C, slow-type
chr10_+_42860776 0.43 ENSMUST00000105494.1
sex comb on midleg-like 4 (Drosophila)
chr10_+_57645834 0.40 ENSMUST00000177325.1
protein kinase inhibitor beta, cAMP dependent, testis specific
chr12_+_38783455 0.40 ENSMUST00000161980.1
ENSMUST00000160701.1
ets variant gene 1
chr11_-_75439551 0.40 ENSMUST00000128330.1
serine (or cysteine) peptidase inhibitor, clade F, member 2
chr14_-_52213379 0.38 ENSMUST00000140603.1
chromodomain helicase DNA binding protein 8
chr6_-_3494587 0.37 ENSMUST00000049985.8
HEPACAM family member 2
chr10_+_57645861 0.35 ENSMUST00000177473.1
protein kinase inhibitor beta, cAMP dependent, testis specific
chr15_-_98607611 0.32 ENSMUST00000096224.4
adenylate cyclase 6
chr15_+_92597104 0.32 ENSMUST00000035399.8
PDZ domain containing RING finger 4
chr10_+_67096456 0.31 ENSMUST00000174317.1
jumonji domain containing 1C
chr3_-_145032765 0.30 ENSMUST00000029919.5
chloride channel calcium activated 3
chr8_+_46739745 0.28 ENSMUST00000034041.7
interferon regulatory factor 2
chr13_+_16014457 0.27 ENSMUST00000164993.1
inhibin beta-A
chr12_+_38783503 0.26 ENSMUST00000159334.1
ets variant gene 1
chr14_-_45388772 0.25 ENSMUST00000046191.7
glucosamine-phosphate N-acetyltransferase 1
chr13_-_97747373 0.23 ENSMUST00000123535.1
RIKEN cDNA 5330416C01 gene
chr9_-_90270712 0.22 ENSMUST00000041767.7
ENSMUST00000144348.1
TBC1 domain family, member 2B
chr9_+_96258697 0.21 ENSMUST00000179416.1
transcription factor Dp 2
chr17_+_28691419 0.21 ENSMUST00000124886.1
mitogen-activated protein kinase 14
chrX_+_109196750 0.20 ENSMUST00000139259.1
ENSMUST00000060013.3
predicted gene 6377
chr19_-_38125258 0.19 ENSMUST00000025951.6
retinol binding protein 4, plasma
chr9_+_54980880 0.19 ENSMUST00000093844.3
cholinergic receptor, nicotinic, alpha polypeptide 5
chr7_-_102494773 0.18 ENSMUST00000058750.3
olfactory receptor 545
chr5_+_148265265 0.18 ENSMUST00000071878.5
microtubule associated tumor suppressor candidate 2
chr5_+_32247351 0.17 ENSMUST00000101376.2
phospholipase B1
chr10_-_89621253 0.17 ENSMUST00000020102.7
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
chr3_-_146596588 0.15 ENSMUST00000029836.4
deoxyribonuclease II beta
chr6_+_38918969 0.14 ENSMUST00000003017.6
thromboxane A synthase 1, platelet
chr11_+_96316684 0.14 ENSMUST00000049241.7
homeobox B4
chr2_-_120539852 0.14 ENSMUST00000171215.1
zinc finger protein 106
chr15_-_6874969 0.12 ENSMUST00000022746.6
ENSMUST00000176826.1
oncostatin M receptor
chr6_-_144209471 0.12 ENSMUST00000038815.7
SRY-box containing gene 5
chr2_+_154200371 0.12 ENSMUST00000028987.6
BPI fold containing family B, member 1
chr11_+_98798653 0.11 ENSMUST00000037930.6
male-specific lethal 1 homolog (Drosophila)
chr5_+_148265307 0.11 ENSMUST00000110514.1
microtubule associated tumor suppressor candidate 2
chr16_-_16527364 0.11 ENSMUST00000069284.7
FYVE, RhoGEF and PH domain containing 4
chr15_+_100154379 0.10 ENSMUST00000023768.6
ENSMUST00000108971.2
DIP2 disco-interacting protein 2 homolog B (Drosophila)
chr11_-_107189325 0.10 ENSMUST00000018577.7
ENSMUST00000106757.1
nucleolar protein 11
chr6_-_144209558 0.10 ENSMUST00000111749.1
ENSMUST00000170367.2
SRY-box containing gene 5
chr19_+_8953826 0.09 ENSMUST00000096239.5
terminal uridylyl transferase 1, U6 snRNA-specific
chr15_-_99287174 0.08 ENSMUST00000109100.1
family with sequence similarity 186, member B
chr9_+_105642957 0.07 ENSMUST00000065778.6
phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150
chr5_-_88675190 0.07 ENSMUST00000133532.1
ENSMUST00000150438.1
G-rich RNA sequence binding factor 1
chr16_-_4880284 0.06 ENSMUST00000037843.6
UBA-like domain containing 1
chr5_+_148265202 0.05 ENSMUST00000110515.2
microtubule associated tumor suppressor candidate 2
chr9_-_89092835 0.04 ENSMUST00000167113.1
tripartite motif-containing 43B
chr12_-_101958148 0.03 ENSMUST00000159883.1
ENSMUST00000160251.1
ENSMUST00000161011.1
ENSMUST00000021606.5
ataxin 3
chr6_+_90122643 0.01 ENSMUST00000174204.1
vomeronasal 1 receptor 51
chr18_-_6516089 0.00 ENSMUST00000115870.2
enhancer of polycomb homolog 1 (Drosophila)
chr12_+_110841021 0.00 ENSMUST00000181348.1
RIKEN cDNA 4921507G05 gene

Network of associatons between targets according to the STRING database.

First level regulatory network of Foxd3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.2 1.3 GO:0051918 regulation of blood vessel size by renin-angiotensin(GO:0002034) renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure(GO:0003072) negative regulation of fibrinolysis(GO:0051918)
0.1 0.5 GO:0014732 skeletal muscle atrophy(GO:0014732)
0.1 0.4 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.1 0.5 GO:0031284 positive regulation of guanylate cyclase activity(GO:0031284)
0.1 0.2 GO:0046865 retinol transport(GO:0034633) isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.1 0.5 GO:1902748 positive regulation of lens fiber cell differentiation(GO:1902748)
0.1 1.8 GO:0060539 diaphragm development(GO:0060539)
0.1 0.6 GO:0015747 urate transport(GO:0015747)
0.1 0.9 GO:2001269 positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:2001269)
0.1 3.5 GO:0006953 acute-phase response(GO:0006953)
0.1 1.3 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.8 GO:1902902 negative regulation of autophagosome assembly(GO:1902902)
0.1 0.3 GO:0060279 regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279)
0.1 0.7 GO:0048934 peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935)
0.1 0.3 GO:0006048 glucosamine metabolic process(GO:0006041) UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.3 GO:0035811 negative regulation of urine volume(GO:0035811)
0.0 0.7 GO:2000480 negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.0 0.4 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.2 GO:2001184 myoblast differentiation involved in skeletal muscle regeneration(GO:0014835) positive regulation of interleukin-12 secretion(GO:2001184)
0.0 0.4 GO:2000270 negative regulation of fibroblast apoptotic process(GO:2000270)
0.0 0.3 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.0 0.4 GO:0071688 striated muscle myosin thick filament assembly(GO:0071688)
0.0 10.4 GO:0043434 response to peptide hormone(GO:0043434)
0.0 0.8 GO:0044705 mating behavior(GO:0007617) multi-organism reproductive behavior(GO:0044705)
0.0 0.1 GO:0038165 oncostatin-M-mediated signaling pathway(GO:0038165)
0.0 0.2 GO:0060164 regulation of timing of neuron differentiation(GO:0060164)
0.0 0.2 GO:2000344 positive regulation of acrosome reaction(GO:2000344)
0.0 0.2 GO:0035095 behavioral response to nicotine(GO:0035095)
0.0 0.1 GO:0030644 cellular chloride ion homeostasis(GO:0030644)
0.0 0.9 GO:0001958 endochondral ossification(GO:0001958) replacement ossification(GO:0036075) response to antibiotic(GO:0046677)
0.0 0.1 GO:0048539 bone marrow development(GO:0048539)
0.0 0.1 GO:0030035 microspike assembly(GO:0030035)
0.0 0.2 GO:0006309 apoptotic DNA fragmentation(GO:0006309)
0.0 0.1 GO:1901838 positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901838)
0.0 0.1 GO:0030242 pexophagy(GO:0030242)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.7 GO:0005577 fibrinogen complex(GO:0005577)
0.1 0.3 GO:0043512 inhibin A complex(GO:0043512)
0.0 0.9 GO:0065010 extracellular membrane-bounded organelle(GO:0065010)
0.0 0.2 GO:0097450 astrocyte end-foot(GO:0097450)
0.0 0.1 GO:0005900 oncostatin-M receptor complex(GO:0005900)
0.0 0.1 GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272)
0.0 0.1 GO:0072487 MSL complex(GO:0072487)
0.0 0.4 GO:0005859 muscle myosin complex(GO:0005859)
0.0 0.2 GO:0005892 acetylcholine-gated channel complex(GO:0005892)
0.0 0.3 GO:0008074 guanylate cyclase complex, soluble(GO:0008074) microvillus membrane(GO:0031528)
0.0 0.4 GO:0071339 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0004517 nitric-oxide synthase activity(GO:0004517) tetrahydrobiopterin binding(GO:0034617)
0.1 0.9 GO:0004035 alkaline phosphatase activity(GO:0004035)
0.1 13.9 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.2 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.1 0.3 GO:0008294 calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294)
0.0 1.1 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.3 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.2 GO:0004531 deoxyribonuclease II activity(GO:0004531)
0.0 0.7 GO:0004862 cAMP-dependent protein kinase inhibitor activity(GO:0004862)
0.0 0.1 GO:0004924 oncostatin-M receptor activity(GO:0004924)
0.0 0.5 GO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.0 0.4 GO:0097493 structural molecule activity conferring elasticity(GO:0097493)
0.0 0.6 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.1 GO:0001515 opioid peptide activity(GO:0001515)
0.0 1.0 GO:0042805 actinin binding(GO:0042805)
0.0 0.8 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.4 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 0.1 GO:0050265 RNA uridylyltransferase activity(GO:0050265)
0.0 1.3 GO:0005507 copper ion binding(GO:0005507)
0.0 0.2 GO:0051525 NFAT protein binding(GO:0051525)
0.0 0.4 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.3 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.2 GO:0019841 retinol binding(GO:0019841)
0.0 0.2 GO:0042166 acetylcholine-gated cation channel activity(GO:0022848) acetylcholine binding(GO:0042166)
0.0 0.8 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 1.8 GO:0001158 enhancer sequence-specific DNA binding(GO:0001158)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.0 0.9 PID P38 MK2 PATHWAY p38 signaling mediated by MAPKAP kinases
0.0 0.3 PID LPA4 PATHWAY LPA4-mediated signaling events
0.0 0.5 PID INTEGRIN A9B1 PATHWAY Alpha9 beta1 integrin signaling events
0.0 0.4 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.3 REACTOME GLYCOPROTEIN HORMONES Genes involved in Glycoprotein hormones
0.0 0.4 REACTOME COMMON PATHWAY Genes involved in Common Pathway
0.0 0.3 REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY Genes involved in Adenylate cyclase activating pathway
0.0 0.2 REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS Genes involved in Presynaptic nicotinic acetylcholine receptors
0.0 0.3 REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS Genes involved in Synthesis of substrates in N-glycan biosythesis
0.0 0.4 REACTOME ENOS ACTIVATION AND REGULATION Genes involved in eNOS activation and regulation
0.0 0.5 REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis
0.0 0.2 REACTOME DSCAM INTERACTIONS Genes involved in DSCAM interactions
0.0 1.3 REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 Genes involved in Response to elevated platelet cytosolic Ca2+
0.0 0.3 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION Genes involved in TRAF6 mediated IRF7 activation