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12D miR HR13_24
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Results for AAGGCAC
Z-value: 1.86
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miRNA associated with seed AAGGCAC
| Name | miRBASE accession |
|---|---|
|
mmu-miR-124-3p.1
|
MIMAT0000134 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr19_+_32619997 Show fit | 3.89 |
ENSMUST00000025833.6
|
3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
|
| chr9_-_21312255 Show fit | 3.40 |
ENSMUST00000115433.3
ENSMUST00000003397.7 |
adaptor protein complex AP-1, mu 2 subunit |
|
| chr2_-_144331695 Show fit | 3.15 |
ENSMUST00000103171.3
|
ovo-like 2 (Drosophila) |
|
| chr11_+_61022560 Show fit | 3.03 |
ENSMUST00000089184.4
|
potassium inwardly-rectifying channel, subfamily J, member 12 |
|
| chr8_-_38661508 Show fit | 2.35 |
ENSMUST00000118896.1
|
sarcoglycan zeta |
|
| chr8_+_35375719 Show fit | 2.31 |
ENSMUST00000070481.6
|
protein phosphatase 1, regulatory (inhibitor) subunit 3B |
|
| chr12_-_11436607 Show fit | 2.30 |
ENSMUST00000072299.5
|
visinin-like 1 |
|
| chr8_+_76899772 Show fit | 2.24 |
ENSMUST00000109913.2
|
nuclear receptor subfamily 3, group C, member 2 |
|
| chr14_-_54781886 Show fit | 2.11 |
ENSMUST00000022787.6
|
solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 |
|
| chr5_+_64970069 Show fit | 2.10 |
ENSMUST00000031080.8
|
family with sequence similarity 114, member A1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of AAGGCAC
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 3.9 | GO:0000103 | sulfate assimilation(GO:0000103) |
| 0.1 | 3.2 | GO:0046676 | negative regulation of insulin secretion(GO:0046676) |
| 0.3 | 3.1 | GO:0098870 | neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870) |
| 0.4 | 2.9 | GO:0060214 | endocardium formation(GO:0060214) |
| 0.0 | 2.9 | GO:0007030 | Golgi organization(GO:0007030) |
| 0.1 | 2.7 | GO:0010107 | potassium ion import(GO:0010107) |
| 0.1 | 2.3 | GO:0015804 | neutral amino acid transport(GO:0015804) |
| 0.7 | 2.2 | GO:0031959 | mineralocorticoid receptor signaling pathway(GO:0031959) |
| 0.1 | 2.2 | GO:0009437 | carnitine metabolic process(GO:0009437) |
| 0.2 | 2.1 | GO:0005981 | regulation of glycogen catabolic process(GO:0005981) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 4.4 | GO:0000323 | lytic vacuole(GO:0000323) lysosome(GO:0005764) |
| 0.1 | 4.3 | GO:0030131 | clathrin adaptor complex(GO:0030131) |
| 0.6 | 4.2 | GO:0016012 | sarcoglycan complex(GO:0016012) |
| 0.0 | 2.7 | GO:0030315 | T-tubule(GO:0030315) |
| 0.0 | 2.5 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
| 0.1 | 2.2 | GO:0043083 | synaptic cleft(GO:0043083) |
| 0.2 | 2.1 | GO:0042587 | glycogen granule(GO:0042587) |
| 0.0 | 2.1 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
| 0.0 | 2.1 | GO:0005776 | autophagosome(GO:0005776) |
| 0.0 | 2.1 | GO:0032587 | ruffle membrane(GO:0032587) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 3.8 | GO:0070566 | adenylyltransferase activity(GO:0070566) |
| 0.1 | 3.1 | GO:0035255 | ionotropic glutamate receptor binding(GO:0035255) |
| 0.1 | 2.9 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
| 0.1 | 2.8 | GO:0070273 | phosphatidylinositol-4-phosphate binding(GO:0070273) |
| 0.1 | 2.7 | GO:0005242 | inward rectifier potassium channel activity(GO:0005242) |
| 0.2 | 2.5 | GO:0019534 | toxin transporter activity(GO:0019534) |
| 0.3 | 2.4 | GO:0086080 | protein binding involved in heterotypic cell-cell adhesion(GO:0086080) |
| 0.7 | 2.2 | GO:0017082 | mineralocorticoid receptor activity(GO:0017082) |
| 0.2 | 2.2 | GO:0015194 | L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889) |
| 0.0 | 2.2 | GO:0019888 | protein phosphatase regulator activity(GO:0019888) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.3 | PID BMP PATHWAY | BMP receptor signaling |
| 0.1 | 3.9 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
| 0.0 | 2.8 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
| 0.0 | 2.6 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
| 0.0 | 2.3 | PID P53 REGULATION PATHWAY | p53 pathway |
| 0.0 | 1.8 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
| 0.0 | 1.7 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
| 0.1 | 1.6 | ST ADRENERGIC | Adrenergic Pathway |
| 0.0 | 1.6 | PID AVB3 OPN PATHWAY | Osteopontin-mediated events |
| 0.0 | 1.5 | PID IGF1 PATHWAY | IGF1 pathway |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 7.8 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
| 0.4 | 3.9 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
| 0.2 | 3.3 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
| 0.0 | 2.6 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
| 0.2 | 2.4 | REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE | Genes involved in N-glycan trimming in the ER and Calnexin/Calreticulin cycle |
| 0.1 | 2.0 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
| 0.0 | 2.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
| 0.1 | 1.9 | REACTOME REGULATION OF WATER BALANCE BY RENAL AQUAPORINS | Genes involved in Regulation of Water Balance by Renal Aquaporins |
| 0.1 | 1.9 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
| 0.1 | 1.9 | REACTOME RORA ACTIVATES CIRCADIAN EXPRESSION | Genes involved in RORA Activates Circadian Expression |