mm10_v2_chr13_-_34345174_34345273	3.50224	AAAGUGC	ENSMUST00000040336.5|Slc22a23|ENSMUSG00000038267.8|solute carrier family 22, member 23
mm10_v2_chr12_-_44210061_44210077	3.47508	AAAGUGC	ENSMUST00000015049.3|Dnajb9|ENSMUSG00000014905.3|DnaJ (Hsp40) homolog, subfamily B, member 9
mm10_v2_chr13_-_92131494_92131680	2.99205	AAAGUGC	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr1_-_51478390_51478406	2.94477	AAAGUGC	ENSMUST00000027279.5|Nabp1|ENSMUSG00000026107.5|nucleic acid binding protein 1
mm10_v2_chr6_+_96113146_96113170	2.90061	AAAGUGC	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr12_-_119238794_119238863	2.78701	AAAGUGC	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr5_+_113735782_113735782	2.7606	AAAGUGC	ENSMUST00000065698.5|Ficd|ENSMUSG00000053334.5|FIC domain containing
mm10_v2_chr8_+_35375719_35375766	2.73666	AAAGUGC	ENSMUST00000070481.6|Ppp1r3b|ENSMUSG00000046794.8|protein phosphatase 1, regulatory (inhibitor) subunit 3B
mm10_v2_chr19_-_47464406_47464450	2.27876	AAAGUGC	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr8_+_82863351_82863397	2.15948	AAAGUGC	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr10_+_34483400_34483445	2.07606	AAAGUGC	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr8_+_60632856_60632905	2.06248	AAAGUGC	ENSMUST00000160719.1|Mfap3l|ENSMUSG00000031647.4|microfibrillar-associated protein 3-like
mm10_v2_chr9_-_96889381_96889474	2.05867	AAAGUGC	ENSMUST00000112951.2|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000126411.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000078478.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000119141.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000120101.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2
mm10_v2_chr17_+_44078813_44078910	2.02068	AAAGUGC	ENSMUST00000154166.1|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5 	ENSMUST00000024756.4|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm10_v2_chr5_-_8997324_8997324	1.96703	AAAGUGC	ENSMUST00000003720.4|Crot|ENSMUSG00000003623.4|carnitine O-octanoyltransferase
mm10_v2_chrX_+_103356464_103356488	1.94861	AAAGUGC	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr9_-_62537036_62537061	1.91467	AAAGUGC	ENSMUST00000048043.5|Coro2b|ENSMUSG00000041729.9|coronin, actin binding protein, 2B
mm10_v2_chr10_+_62133082_62133098	1.89672	AAAGUGC	ENSMUST00000050103.1|Neurog3|ENSMUSG00000044312.3|neurogenin 3
mm10_v2_chr5_-_65492984_65493051	1.88069	AAAGUGC	ENSMUST00000139122.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr6_-_147264124_147264167	1.8043	AAAGUGC	ENSMUST00000052296.6|Pthlh|ENSMUSG00000048776.6|parathyroid hormone-like peptide
mm10_v2_chr14_+_30715599_30715641	1.76119	AAAGUGC	ENSMUST00000054230.4|Sfmbt1|ENSMUSG00000006527.8|Scm-like with four mbt domains 1
mm10_v2_chr4_-_139092958_139092993	1.74272	AAAGUGC	ENSMUST00000042844.6|Nbl1|ENSMUSG00000041120.6|neuroblastoma, suppression of tumorigenicity 1
mm10_v2_chr4_+_138454305_138454327	1.74078	AAAGUGC	ENSMUST00000050918.3|Camk2n1|ENSMUSG00000046447.3|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm10_v2_chr8_-_89044162_89044195	1.73193	AAAGUGC	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr15_+_57694651_57694686	1.69968	AAAGUGC	ENSMUST00000096430.4|Zhx2|ENSMUSG00000071757.4|zinc fingers and homeoboxes 2
mm10_v2_chr5_+_104459450_104459580	1.65983	AAAGUGC	ENSMUST00000086831.3|Pkd2|ENSMUSG00000034462.9|polycystic kidney disease 2
mm10_v2_chr18_+_51117754_51117898	1.61746	AAAGUGC	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr19_+_22448242_22448283	1.60931	AAAGUGC	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr12_+_24651346_24651409	1.59899	AAAGUGC	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr8_-_27174623_27174651	1.57406	AAAGUGC	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr19_-_34747289_34747313	1.51037	AAAGUGC	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr8_+_14911663_14911742	1.5065	AAAGUGC	ENSMUST00000084207.5|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000161162.1|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000110800.2|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10
mm10_v2_chr18_+_74442500_74442537	1.45565	AAAGUGC	ENSMUST00000074157.6|Myo5b|ENSMUSG00000025885.12|myosin VB
mm10_v2_chr17_+_43016536_43016591	1.42331	AAAGUGC	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chr19_+_16956110_16956124	1.38524	AAAGUGC	ENSMUST00000087689.4|Prune2|ENSMUSG00000039126.9|prune homolog 2 (Drosophila)
mm10_v2_chr7_+_75455534_75455629	1.36528	AAAGUGC	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr3_-_122619663_122619680	1.35478	AAAGUGC	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr3_-_58525867_58525873	1.34287	AAAGUGC	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr10_+_42678890_42678948	1.29076	AAAGUGC	ENSMUST00000040718.5|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr4_-_53159885_53159900	1.28499	AAAGUGC	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr17_+_29093763_29093781	1.28063	AAAGUGC	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr6_-_72617000_72617000	1.27783	AAAGUGC	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr13_+_12565868_12565883	1.27616	AAAGUGC	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr5_-_36988922_36988982	1.2721	AAAGUGC	ENSMUST00000166339.1|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human) 	ENSMUST00000043964.6|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human)
mm10_v2_chr10_-_71159676_71159708	1.26787	AAAGUGC	ENSMUST00000014473.5|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila) 	ENSMUST00000143791.1|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila)
mm10_v2_chr14_-_72709986_72710027	1.26447	AAAGUGC	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr15_-_67113909_67113992	1.24501	AAAGUGC	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr15_-_60824942_60825080	1.24012	AAAGUGC	ENSMUST00000100635.3|Fam84b|ENSMUSG00000072568.3|family with sequence similarity 84, member B
mm10_v2_chr3_-_59344256_59344367	1.23386	AAAGUGC	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr17_+_25188380_25188418	1.22187	AAAGUGC	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr2_+_79635352_79635410	1.22046	AAAGUGC	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr17_+_26933070_26933158	1.20952	AAAGUGC	ENSMUST00000073724.5|Phf1|ENSMUSG00000024193.7|PHD finger protein 1
mm10_v2_chr9_-_123851855_123851912	1.20823	AAAGUGC	ENSMUST00000184082.1|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1 	ENSMUST00000167595.2|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1
mm10_v2_chr11_-_59964936_59964951	1.16263	AAAGUGC	ENSMUST00000062405.7|Rasd1|ENSMUSG00000049892.7|RAS, dexamethasone-induced 1
mm10_v2_chr11_-_40755201_40755311	1.16099	AAAGUGC	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr9_+_121760000_121760061	1.14879	AAAGUGC	ENSMUST00000093772.3|Zfp651|ENSMUSG00000013419.6|zinc finger protein 651
mm10_v2_chr4_-_87230435_87230477	1.13509	AAAGUGC	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr5_+_75152274_75152297	1.12328	AAAGUGC	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr5_-_113993873_113993902	1.12104	AAAGUGC	ENSMUST00000159592.1|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr16_+_78301458_78301496	1.11339	AAAGUGC	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr15_+_95790831_95790859	1.10334	AAAGUGC	ENSMUST00000071874.6|Ano6|ENSMUSG00000064210.6|anoctamin 6
mm10_v2_chr17_-_15826521_15826590	1.08518	AAAGUGC	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr12_+_80790532_80790574	1.05045	AAAGUGC	ENSMUST00000068519.5|4933426M11Rik|ENSMUSG00000021133.8|RIKEN cDNA 4933426M11 gene
mm10_v2_chr5_-_36484112_36484302	1.02982	AAAGUGC	ENSMUST00000119916.1|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B 	ENSMUST00000031097.7|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B
mm10_v2_chr10_-_93311073_93311161	1.02242	AAAGUGC	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr18_+_37655891_37655915	1.01854	AAAGUGC	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr9_+_68653761_68653786	1.00668	AAAGUGC	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr2_+_127247908_127247997	0.991742	AAAGUGC	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr17_+_57249450_57249522	0.968932	AAAGUGC	ENSMUST00000019631.9|Trip10|ENSMUSG00000019487.10|thyroid hormone receptor interactor 10
mm10_v2_chr9_-_64022043_64022066	0.968832	AAAGUGC	ENSMUST00000041029.5|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr5_+_8422831_8422906	0.96879	AAAGUGC	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr2_+_4400958_4400975	0.965502	AAAGUGC	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr12_+_32378692_32378789	0.961941	AAAGUGC	ENSMUST00000172332.2|Ccdc71l|ENSMUSG00000090946.2|coiled-coil domain containing 71 like
mm10_v2_chr10_-_7780866_7780923	0.948322	AAAGUGC	ENSMUST00000124838.1|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1 	ENSMUST00000039763.7|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1
mm10_v2_chr3_+_59006978_59006978	0.928267	AAAGUGC	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr19_+_7494033_7494068	0.923331	AAAGUGC	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr12_-_87299705_87299705	0.9212	AAAGUGC	ENSMUST00000125733.1|Ism2|ENSMUSG00000050671.6|isthmin 2 homolog (zebrafish)
mm10_v2_chr15_+_89059712_89059760	0.920912	AAAGUGC	ENSMUST00000161372.1|Panx2|ENSMUSG00000058441.7|pannexin 2 	ENSMUST00000162424.1|Panx2|ENSMUSG00000058441.7|pannexin 2
mm10_v2_chr4_+_134923589_134923593	0.911476	AAAGUGC	ENSMUST00000078084.6|D4Wsu53e|ENSMUSG00000037266.12|DNA segment, Chr 4, Wayne State University 53, expressed
mm10_v2_chr11_-_106788486_106788532	0.89608	AAAGUGC	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr19_+_46152505_46152514	0.895723	AAAGUGC	ENSMUST00000026254.7|Gbf1|ENSMUSG00000025224.8|golgi-specific brefeldin A-resistance factor 1
mm10_v2_chr1_-_126830632_126830778	0.891176	AAAGUGC	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr5_-_67427794_67427813	0.891111	AAAGUGC	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr19_+_60811574_60811619	0.874286	AAAGUGC	ENSMUST00000128357.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000119633.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000025957.8|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A
mm10_v2_chr11_+_69765899_69765925	0.871747	AAAGUGC	ENSMUST00000108640.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4 	ENSMUST00000108639.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4
mm10_v2_chr16_-_91597636_91597800	0.870299	AAAGUGC	ENSMUST00000023686.8|Tmem50b|ENSMUSG00000022964.8|transmembrane protein 50B
mm10_v2_chr11_-_98587193_98587368	0.861015	AAAGUGC	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr9_+_107563246_107563285	0.858618	AAAGUGC	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chr4_-_3938354_3938401	0.849451	AAAGUGC	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr6_+_54326955_54327012	0.846773	AAAGUGC	ENSMUST00000059138.4|Prr15|ENSMUSG00000045725.4|proline rich 15
mm10_v2_chr16_+_8830093_8830104	0.837323	AAAGUGC	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr1_+_178319130_178319171	0.825524	AAAGUGC	ENSMUST00000027781.6|Cox20|ENSMUSG00000026500.6|COX20 Cox2 chaperone
mm10_v2_chr14_-_78308031_78308050	0.825468	AAAGUGC	ENSMUST00000022592.7|Tnfsf11|ENSMUSG00000022015.8|tumor necrosis factor (ligand) superfamily, member 11
mm10_v2_chr11_-_86993682_86993707	0.824513	AAAGUGC	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chrX_+_139610612_139610632	0.822589	AAAGUGC	ENSMUST00000113026.1|Rnf128|ENSMUSG00000031438.5|ring finger protein 128
mm10_v2_chr2_-_167062981_167063048	0.818085	AAAGUGC	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr2_+_152293828_152293861	0.817909	AAAGUGC	ENSMUST00000028963.7|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20 	ENSMUST00000144252.1|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20
mm10_v2_chr14_-_65262391_65262490	0.814967	AAAGUGC	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr19_+_27217357_27217424	0.810738	AAAGUGC	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr19_+_29367447_29367468	0.808638	AAAGUGC	ENSMUST00000016640.7|Cd274|ENSMUSG00000016496.7|CD274 antigen
mm10_v2_chrX_-_162643629_162643665	0.806121	AAAGUGC	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr19_+_38836561_38836612	0.802578	AAAGUGC	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr17_-_46031813_46031863	0.800751	AAAGUGC	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr11_-_40692666_40692774	0.79833	AAAGUGC	ENSMUST00000040167.4|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr4_-_129227883_129227923	0.796888	AAAGUGC	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr5_-_76304474_76304548	0.788939	AAAGUGC	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr1_+_191906743_191906767	0.787601	AAAGUGC	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr12_-_101913116_101913267	0.780121	AAAGUGC	ENSMUST00000177536.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000176728.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000021605.7|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11
mm10_v2_chr4_-_101265236_101265282	0.774113	AAAGUGC	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr5_+_64803513_64803530	0.768451	AAAGUGC	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr4_-_128806045_128806167	0.764328	AAAGUGC	ENSMUST00000106072.2|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362 	ENSMUST00000170934.1|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362
mm10_v2_chr6_+_122819888_122819938	0.759474	AAAGUGC	ENSMUST00000003238.7|Foxj2|ENSMUSG00000003154.9|forkhead box J2
mm10_v2_chr9_-_96631487_96631617	0.747364	AAAGUGC	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr2_+_155381808_155381884	0.745322	AAAGUGC	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr18_+_61555258_61555290	0.742037	AAAGUGC	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr7_-_119895697_119895752	0.736228	AAAGUGC	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr11_-_71019233_71019303	0.729968	AAAGUGC	ENSMUST00000108523.3|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2 	ENSMUST00000143850.1|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2
mm10_v2_chr1_-_161876656_161876682	0.729685	AAAGUGC	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr15_-_100584075_100584075	0.723357	AAAGUGC	ENSMUST00000184908.1|POU6F1|ENSMUSG00000098598.1|POU domain, class 6, transcription factor 1 (Pou6f1), mRNA
mm10_v2_chr2_+_59612034_59612109	0.717545	AAAGUGC	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chrX_+_77511002_77511100	0.711558	AAAGUGC	ENSMUST00000088217.5|Tbl1x|ENSMUSG00000025246.7|transducin (beta)-like 1 X-linked
mm10_v2_chr10_+_70245083_70245140	0.706316	AAAGUGC	ENSMUST00000046807.6|Slc16a9|ENSMUSG00000037762.6|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm10_v2_chr14_+_14703025_14703073	0.704378	AAAGUGC	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr4_+_86874396_86874438	0.704169	AAAGUGC	ENSMUST00000045224.7|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2 	ENSMUST00000084433.4|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2
mm10_v2_chr1_+_177444653_177444669	0.701087	AAAGUGC	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr6_+_122308684_122308720	0.700356	AAAGUGC	ENSMUST00000007602.8|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent 	ENSMUST00000112610.1|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent
mm10_v2_chr15_-_31367527_31367759	0.694049	AAAGUGC	ENSMUST00000076942.4|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000123325.1|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000110410.2|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B
mm10_v2_chr19_+_28990476_28990497	0.689336	AAAGUGC	ENSMUST00000050148.3|Cdc37l1|ENSMUSG00000024780.6|cell division cycle 37-like 1
mm10_v2_chr8_-_26119125_26119233	0.682069	AAAGUGC	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr19_-_3575708_3575756	0.663843	AAAGUGC	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr1_-_58586191_58586323	0.66031	AAAGUGC	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr2_-_170131156_170131220	0.65644	AAAGUGC	ENSMUST00000063710.6|Zfp217|ENSMUSG00000052056.8|zinc finger protein 217
mm10_v2_chr6_-_13677930_13677974	0.631414	AAAGUGC	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chrX_-_164980310_164980375	0.63116	AAAGUGC	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr4_+_152338619_152338709	0.629235	AAAGUGC	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr12_-_12941827_12941914	0.624123	AAAGUGC	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr5_+_17574268_17574293	0.619652	AAAGUGC	ENSMUST00000030568.7|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr1_+_155158703_155158776	0.619094	AAAGUGC	ENSMUST00000027743.7|Stx6|ENSMUSG00000026470.9|syntaxin 6
mm10_v2_chr15_+_40655020_40655054	0.615976	AAAGUGC	ENSMUST00000053467.4|Zfpm2|ENSMUSG00000022306.8|zinc finger protein, multitype 2
mm10_v2_chr6_+_116338013_116338083	0.613515	AAAGUGC	ENSMUST00000079012.6|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8 	ENSMUST00000101032.3|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8
mm10_v2_chr12_-_75177325_75177359	0.61063	AAAGUGC	ENSMUST00000042299.2|Kcnh5|ENSMUSG00000034402.2|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm10_v2_chr10_-_128696257_128696273	0.610378	AAAGUGC	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr2_+_32535315_32535359	0.596903	AAAGUGC	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr4_+_32983008_32983155	0.596215	AAAGUGC	ENSMUST00000098190.3|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D 	ENSMUST00000029946.7|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D
mm10_v2_chr5_-_137684665_137684729	0.590595	AAAGUGC	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chr10_+_19934472_19934526	0.589619	AAAGUGC	ENSMUST00000095806.3|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5 	ENSMUST00000120259.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr11_-_109473598_109473666	0.588188	AAAGUGC	ENSMUST00000070152.5|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr2_+_22622183_22622205	0.586251	AAAGUGC	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr6_+_114643094_114643105	0.57965	AAAGUGC	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr10_-_122047293_122047322	0.576962	AAAGUGC	ENSMUST00000020322.5|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1 	ENSMUST00000081688.6|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1
mm10_v2_chr4_-_155222535_155222592	0.576705	AAAGUGC	ENSMUST00000084103.3|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian) 	ENSMUST00000030917.5|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian)
mm10_v2_chr18_+_12333953_12334024	0.576068	AAAGUGC	ENSMUST00000092070.6|Lama3|ENSMUSG00000024421.10|laminin, alpha 3
mm10_v2_chr12_-_110978981_110979040	0.571419	AAAGUGC	ENSMUST00000135131.1|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9 	ENSMUST00000043459.6|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9 	ENSMUST00000128353.1|Ankrd9|ENSMUSG00000037904.8|ankyrin repeat domain 9
mm10_v2_chr5_+_88886809_88886825	0.563195	AAAGUGC	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr9_-_42124276_42124333	0.560719	AAAGUGC	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr9_-_66919646_66919710	0.553299	AAAGUGC	ENSMUST00000041139.7|Rab8b|ENSMUSG00000036943.8|RAB8B, member RAS oncogene family
mm10_v2_chr8_+_91070052_91070123	0.553149	AAAGUGC	ENSMUST00000034091.7|Rbl2|ENSMUSG00000031666.8|retinoblastoma-like 2
mm10_v2_chr8_-_25016743_25016877	0.55132	AAAGUGC	ENSMUST00000084032.5|Adam9|ENSMUSG00000031555.7|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm10_v2_chr6_+_92091378_92091390	0.5508	AAAGUGC	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr9_+_122351555_122351608	0.55	AAAGUGC	ENSMUST00000156520.1|Abhd5|ENSMUSG00000032540.9|abhydrolase domain containing 5
mm10_v2_chr7_-_113369326_113369395	0.549524	AAAGUGC	ENSMUST00000047091.7|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10 	ENSMUST00000119278.1|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10
mm10_v2_chr3_+_157947414_157947510	0.541508	AAAGUGC	ENSMUST00000164582.1|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c 	ENSMUST00000040787.8|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c
mm10_v2_chr6_-_120916813_120916867	0.532244	AAAGUGC	ENSMUST00000004560.5|Bid|ENSMUSG00000004446.6|BH3 interacting domain death agonist
mm10_v2_chr11_-_103267405_103267472	0.532116	AAAGUGC	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr3_+_57736056_57736128	0.531244	AAAGUGC	ENSMUST00000041826.9|Rnf13|ENSMUSG00000036503.9|ring finger protein 13
mm10_v2_chr2_+_23068168_23068241	0.530565	AAAGUGC	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chrX_-_162888426_162888473	0.527168	AAAGUGC	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr7_-_130519465_130519558	0.523432	AAAGUGC	ENSMUST00000035458.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1 	ENSMUST00000033139.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1
mm10_v2_chr4_-_46991842_46991916	0.519568	AAAGUGC	ENSMUST00000107749.2|Gabbr2|ENSMUSG00000039809.9|gamma-aminobutyric acid (GABA) B receptor, 2
mm10_v2_chr18_+_38993126_38993186	0.515969	AAAGUGC	ENSMUST00000097593.2|Arhgap26|ENSMUSG00000036452.11|Rho GTPase activating protein 26
mm10_v2_chr18_+_75367529_75367561	0.515394	AAAGUGC	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr18_+_32815383_32815383	0.511945	AAAGUGC	ENSMUST00000025237.3|Tslp|ENSMUSG00000024379.3|thymic stromal lymphopoietin
mm10_v2_chr6_-_84593810_84593922	0.508775	AAAGUGC	ENSMUST00000077705.3|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1 	ENSMUST00000168003.2|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1
mm10_v2_chr3_-_57847478_57847610	0.506613	AAAGUGC	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr5_+_91074611_91074629	0.503189	AAAGUGC	ENSMUST00000031324.4|Ereg|ENSMUSG00000029377.4|epiregulin
mm10_v2_chr8_-_85840877_85840957	0.502078	AAAGUGC	ENSMUST00000034140.7|Itfg1|ENSMUSG00000031703.7|integrin alpha FG-GAP repeat containing 1
mm10_v2_chr11_-_80779989_80780033	0.501935	AAAGUGC	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr11_-_50292302_50292363	0.492786	AAAGUGC	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr17_+_24470393_24470481	0.489579	AAAGUGC	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr3_+_28781305_28781344	0.487664	AAAGUGC	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr11_+_117654798_117654824	0.486607	AAAGUGC	ENSMUST00000106344.1|Tnrc6c|ENSMUSG00000025571.7|trinucleotide repeat containing 6C
mm10_v2_chr2_+_19658055_19658072	0.485456	AAAGUGC	ENSMUST00000052168.4|Otud1|ENSMUSG00000043415.4|OTU domain containing 1
mm10_v2_chr3_+_87617541_87617613	0.483991	AAAGUGC	ENSMUST00000039476.8|Arhgef11|ENSMUSG00000041977.11|Rho guanine nucleotide exchange factor (GEF) 11 	ENSMUST00000129113.1|Arhgef11|ENSMUSG00000041977.11|Rho guanine nucleotide exchange factor (GEF) 11
mm10_v2_chr11_+_51763682_51763749	0.477873	AAAGUGC	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr8_+_106935720_106935776	0.476996	AAAGUGC	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr9_+_59750876_59750918	0.475042	AAAGUGC	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr1_+_59912972_59913027	0.473514	AAAGUGC	ENSMUST00000036540.5|Fam117b|ENSMUSG00000041040.6|family with sequence similarity 117, member B
mm10_v2_chr2_+_165992625_165992667	0.471205	AAAGUGC	ENSMUST00000109252.1|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3 	ENSMUST00000088095.5|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3
mm10_v2_chr12_+_81631369_81631394	0.468699	AAAGUGC	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr2_-_64097994_64098023	0.466681	AAAGUGC	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr7_-_16614937_16615021	0.462526	AAAGUGC	ENSMUST00000171937.1|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1 	ENSMUST00000075845.4|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1
mm10_v2_chr5_+_77265454_77265549	0.461655	AAAGUGC	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr17_+_53566971_53567023	0.45984	AAAGUGC	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr14_+_18271122_18271186	0.458102	AAAGUGC	ENSMUST00000132374.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1 	ENSMUST00000133460.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1
mm10_v2_chr18_-_4352944_4352962	0.457267	AAAGUGC	ENSMUST00000025078.2|Map3k8|ENSMUSG00000024235.4|mitogen-activated protein kinase kinase kinase 8
mm10_v2_chr6_-_127151044_127151055	0.451373	AAAGUGC	ENSMUST00000000188.8|Ccnd2|ENSMUSG00000000184.9|cyclin D2
mm10_v2_chr11_+_116030304_116030385	0.450894	AAAGUGC	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr2_+_121955964_121956001	0.449486	AAAGUGC	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr18_-_80986578_80986578	0.449437	AAAGUGC	ENSMUST00000057950.7|Sall3|ENSMUSG00000024565.8|sal-like 3 (Drosophila)
mm10_v2_chr7_-_74013676_74013699	0.446041	AAAGUGC	ENSMUST00000026896.4|St8sia2|ENSMUSG00000025789.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm10_v2_chr2_-_127792467_127792505	0.444329	AAAGUGC	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr1_+_191717834_191717904	0.442408	AAAGUGC	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr7_-_121707253_121707460	0.43783	AAAGUGC	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr6_-_100287441_100287465	0.435918	AAAGUGC	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr6_+_143167210_143167267	0.434127	AAAGUGC	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr2_-_23572038_23572112	0.428226	AAAGUGC	ENSMUST00000132484.1|Spopl|ENSMUSG00000026771.8|speckle-type POZ protein-like
mm10_v2_chr11_+_60537978_60538074	0.424734	AAAGUGC	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr12_+_8921598_8921671	0.416762	AAAGUGC	ENSMUST00000020909.3|Laptm4a|ENSMUSG00000020585.4|lysosomal-associated protein transmembrane 4A
mm10_v2_chr5_+_72914264_72914304	0.416548	AAAGUGC	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr9_+_57560934_57560989	0.413961	AAAGUGC	ENSMUST00000045791.9|Scamp2|ENSMUSG00000040188.9|secretory carrier membrane protein 2
mm10_v2_chr5_-_138263942_138263994	0.412939	AAAGUGC	ENSMUST00000048421.7|BC037034|ENSMUSG00000036948.11|cDNA sequence BC037034 	ENSMUST00000164203.1|BC037034|ENSMUSG00000091964.1|cDNA sequence BC037034
mm10_v2_chr12_-_3309912_3309975	0.410794	AAAGUGC	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr18_-_23041641_23041671	0.403777	AAAGUGC	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr2_+_73271925_73271939	0.40209	AAAGUGC	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr4_-_142239356_142239418	0.401763	AAAGUGC	ENSMUST00000036476.3|Kazn|ENSMUSG00000040606.7|kazrin, periplakin interacting protein
mm10_v2_chr16_-_21694570_21694665	0.398952	AAAGUGC	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr3_+_96557950_96557968	0.392469	AAAGUGC	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr4_+_24973419_24973419	0.392359	AAAGUGC	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr6_-_89362581_89362637	0.391299	AAAGUGC	ENSMUST00000163139.1|Plxna1|ENSMUSG00000030084.5|plexin A1
mm10_v2_chr2_+_173659760_173659816	0.387256	AAAGUGC	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr1_-_88702121_88702221	0.382654	AAAGUGC	ENSMUST00000159814.1|Arl4c|ENSMUSG00000049866.6|ADP-ribosylation factor-like 4C
mm10_v2_chr5_+_96997676_96997766	0.381328	AAAGUGC	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr2_+_32288244_32288256	0.378885	AAAGUGC	ENSMUST00000113377.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000100194.2|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2
mm10_v2_chr13_-_13393592_13393624	0.378427	AAAGUGC	ENSMUST00000021738.8|Gpr137b|ENSMUSG00000021306.10|G protein-coupled receptor 137B
mm10_v2_chr1_+_172148015_172148048	0.374528	AAAGUGC	ENSMUST00000074144.5|Dcaf8|ENSMUSG00000026554.10|DDB1 and CUL4 associated factor 8
mm10_v2_chr11_-_101119814_101119849	0.37207	AAAGUGC	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
mm10_v2_chr6_-_41636389_41636409	0.367909	AAAGUGC	ENSMUST00000031902.5|Trpv6|ENSMUSG00000029868.8|transient receptor potential cation channel, subfamily V, member 6
mm10_v2_chr12_+_64917901_64917944	0.361564	AAAGUGC	ENSMUST00000058135.4|Gm527|ENSMUSG00000047227.4|predicted gene 527
mm10_v2_chr11_+_4236411_4236433	0.357458	AAAGUGC	ENSMUST00000075221.2|Osm|ENSMUSG00000058755.3|oncostatin M
mm10_v2_chr2_+_118901428_118901488	0.355345	AAAGUGC	ENSMUST00000036578.6|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr7_-_105633525_105633601	0.352691	AAAGUGC	ENSMUST00000153371.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000106789.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000057525.7|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3
mm10_v2_chr9_-_65580040_65580061	0.352548	AAAGUGC	ENSMUST00000068944.7|Plekho2|ENSMUSG00000050721.8|pleckstrin homology domain containing, family O member 2
mm10_v2_chr11_-_103412668_103412711	0.352372	AAAGUGC	ENSMUST00000041272.9|Plekhm1|ENSMUSG00000034247.9|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm10_v2_chr10_-_42478488_42478565	0.352339	AAAGUGC	ENSMUST00000041024.8|Lace1|ENSMUSG00000038302.8|lactation elevated 1
mm10_v2_chr10_+_79854618_79854640	0.351905	AAAGUGC	ENSMUST00000165704.1|Ptbp1|ENSMUSG00000006498.10|polypyrimidine tract binding protein 1
mm10_v2_chr1_-_43827751_43827800	0.351397	AAAGUGC	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr12_+_71015966_71016063	0.350309	AAAGUGC	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr11_+_95712673_95712673	0.348641	AAAGUGC	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr13_-_101768154_101768217	0.348056	AAAGUGC	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr7_-_65156416_65156570	0.347033	AAAGUGC	ENSMUST00000148459.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1 	ENSMUST00000119118.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1
mm10_v2_chr7_+_49246812_49246844	0.346282	AAAGUGC	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chrX_+_99136119_99136138	0.345998	AAAGUGC	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr1_+_82586942_82586988	0.345325	AAAGUGC	ENSMUST00000113457.2|Col4a3|ENSMUSG00000079465.2|collagen, type IV, alpha 3
mm10_v2_chr10_-_80742211_80742280	0.342985	AAAGUGC	ENSMUST00000020420.7|Ap3d1|ENSMUSG00000020198.7|adaptor-related protein complex 3, delta 1 subunit
mm10_v2_chr7_-_67759735_67759759	0.342264	AAAGUGC	ENSMUST00000074233.4|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein 	ENSMUST00000051389.8|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein
mm10_v2_chr6_-_149101674_149101686	0.341219	AAAGUGC	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr6_-_39419757_39419817	0.334911	AAAGUGC	ENSMUST00000146785.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1 	ENSMUST00000114823.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1
mm10_v2_chr11_+_72314438_72314455	0.332309	AAAGUGC	ENSMUST00000108504.1|Fbxo39|ENSMUSG00000070388.3|F-box protein 39
mm10_v2_chr12_-_57546121_57546141	0.331549	AAAGUGC	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr6_-_92214897_92214925	0.330525	AAAGUGC	ENSMUST00000014694.8|Zfyve20|ENSMUSG00000014550.8|zinc finger, FYVE domain containing 20
mm10_v2_chr16_-_20621255_20621304	0.329839	AAAGUGC	ENSMUST00000052939.2|Camk2n2|ENSMUSG00000051146.2|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm10_v2_chr7_+_49910112_49910146	0.328039	AAAGUGC	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr16_-_97922582_97922633	0.323902	AAAGUGC	ENSMUST00000170757.1|C2cd2|ENSMUSG00000045975.7|C2 calcium-dependent domain containing 2
mm10_v2_chr18_+_32163073_32163115	0.322554	AAAGUGC	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr14_-_66868572_66868688	0.321883	AAAGUGC	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr2_-_92434027_92434053	0.321127	AAAGUGC	ENSMUST00000111278.1|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like) 	ENSMUST00000090559.5|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like)
mm10_v2_chr10_-_127211528_127211626	0.318837	AAAGUGC	ENSMUST00000013970.7|Pip4k2c|ENSMUSG00000025417.7|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm10_v2_chr7_-_47008397_47008421	0.318834	AAAGUGC	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr8_+_90828820_90828842	0.317941	AAAGUGC	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr1_-_190978954_190978998	0.316009	AAAGUGC	ENSMUST00000047409.6|Vash2|ENSMUSG00000037568.6|vasohibin 2
mm10_v2_chr4_-_114987220_114987256	0.310658	AAAGUGC	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr6_-_112947246_112947277	0.309391	AAAGUGC	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr9_+_57940104_57940120	0.307189	AAAGUGC	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr3_+_103914560_103914605	0.306945	AAAGUGC	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr1_-_43098622_43098686	0.304839	AAAGUGC	ENSMUST00000095014.1|Tgfbrap1|ENSMUSG00000070939.3|transforming growth factor, beta receptor associated protein 1
mm10_v2_chr2_+_113327711_113327753	0.304601	AAAGUGC	ENSMUST00000099576.2|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr18_+_7869159_7869209	0.302324	AAAGUGC	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
mm10_v2_chr11_-_100939357_100939456	0.300841	AAAGUGC	ENSMUST00000092671.5|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3 	ENSMUST00000103114.1|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3
mm10_v2_chr12_+_53248677_53248677	0.295933	AAAGUGC	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr2_-_34372004_34372044	0.293083	AAAGUGC	ENSMUST00000113132.2|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3 	ENSMUST00000040638.8|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3
mm10_v2_chr19_-_6840590_6840644	0.292988	AAAGUGC	ENSMUST00000170516.2|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4 	ENSMUST00000025903.5|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4
mm10_v2_chr11_-_98329641_98329654	0.291793	AAAGUGC	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr19_-_45783512_45783558	0.289989	AAAGUGC	ENSMUST00000026243.3|Mgea5|ENSMUSG00000025220.7|meningioma expressed antigen 5 (hyaluronidase)
mm10_v2_chr18_-_46525940_46525999	0.289614	AAAGUGC	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr11_+_106084577_106084623	0.288857	AAAGUGC	ENSMUST00000002044.9|Map3k3|ENSMUSG00000020700.11|mitogen-activated protein kinase kinase kinase 3
mm10_v2_chr5_-_25498702_25498745	0.28851	AAAGUGC	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr2_+_128126030_128126056	0.288196	AAAGUGC	ENSMUST00000089634.5|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000019281.7|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000110341.2|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103211.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103210.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator)
mm10_v2_chr3_-_101110278_101110294	0.288178	AAAGUGC	ENSMUST00000102694.3|Ptgfrn|ENSMUSG00000027864.8|prostaglandin F2 receptor negative regulator
mm10_v2_chr6_+_91978851_91978913	0.28536	AAAGUGC	ENSMUST00000089334.2|Fgd5|ENSMUSG00000034037.8|FYVE, RhoGEF and PH domain containing 5
mm10_v2_chr18_+_64887690_64887762	0.285302	AAAGUGC	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr7_-_29505447_29505473	0.282359	AAAGUGC	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr15_-_31530999_31531069	0.279233	AAAGUGC	ENSMUST00000090227.4|March6|ENSMUSG00000039100.9|membrane-associated ring finger (C3HC4) 6
mm10_v2_chr5_-_43782086_43782149	0.278439	AAAGUGC	ENSMUST00000119523.1|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000087465.4|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000121736.1|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5 	ENSMUST00000047857.9|Fbxl5|ENSMUSG00000039753.10|F-box and leucine-rich repeat protein 5
mm10_v2_chr17_+_24549950_24550062	0.278257	AAAGUGC	ENSMUST00000035565.3|Pkd1|ENSMUSG00000032855.5|polycystic kidney disease 1 homolog
mm10_v2_chr14_+_8098196_8098296	0.27782	AAAGUGC	ENSMUST00000112689.2|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase 	ENSMUST00000036682.7|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase
mm10_v2_chr9_+_21723576_21723615	0.277687	AAAGUGC	ENSMUST00000034713.7|Ldlr|ENSMUSG00000032193.8|low density lipoprotein receptor
mm10_v2_chr17_+_26715644_26715724	0.276388	AAAGUGC	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr11_-_89418948_89418948	0.275624	AAAGUGC	ENSMUST00000050983.1|4932411E22Rik|ENSMUSG00000047490.1|RIKEN cDNA 4932411E22 gene
mm10_v2_chr9_-_99568849_99568911	0.275333	AAAGUGC	ENSMUST00000035043.5|Armc8|ENSMUSG00000032468.5|armadillo repeat containing 8
mm10_v2_chr13_+_14063776_14063822	0.274937	AAAGUGC	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr11_+_35769462_35769484	0.273374	AAAGUGC	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr9_-_63146980_63147011	0.273353	AAAGUGC	ENSMUST00000055281.7|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1 	ENSMUST00000119146.1|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1
mm10_v2_chr11_-_119040905_119040969	0.272569	AAAGUGC	ENSMUST00000026663.7|Cbx8|ENSMUSG00000025578.9|chromobox 8
mm10_v2_chr2_-_39226343_39226451	0.270956	AAAGUGC	ENSMUST00000028087.3|Ppp6c|ENSMUSG00000026753.3|protein phosphatase 6, catalytic subunit
mm10_v2_chr2_-_26092149_26092177	0.270805	AAAGUGC	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr11_-_120624973_120625014	0.269322	AAAGUGC	ENSMUST00000106183.2|Sirt7|ENSMUSG00000025138.8|sirtuin 7 	ENSMUST00000080202.5|Sirt7|ENSMUSG00000025138.8|sirtuin 7
mm10_v2_chr15_+_85735754_85735808	0.268748	AAAGUGC	ENSMUST00000109422.1|Ppara|ENSMUSG00000022383.7|peroxisome proliferator activated receptor alpha
mm10_v2_chr2_+_180042496_180042562	0.266998	AAAGUGC	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr16_-_35769356_35769384	0.265579	AAAGUGC	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chrX_-_48454152_48454193	0.26283	AAAGUGC	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr5_-_125389915_125390055	0.259397	AAAGUGC	ENSMUST00000136312.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr5_+_30814571_30814641	0.258685	AAAGUGC	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr13_-_111808938_111809018	0.25814	AAAGUGC	ENSMUST00000109267.2|Map3k1|ENSMUSG00000021754.11|mitogen-activated protein kinase kinase kinase 1
mm10_v2_chr6_+_83794974_83794985	0.257582	AAAGUGC	ENSMUST00000037376.7|Nagk|ENSMUSG00000034744.7|N-acetylglucosamine kinase
mm10_v2_chr16_-_3872378_3872411	0.256998	AAAGUGC	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr3_+_127633134_127633140	0.256574	AAAGUGC	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr14_-_70599832_70599887	0.256104	AAAGUGC	ENSMUST00000022690.9|Fam160b2|ENSMUSG00000022095.9|family with sequence similarity 160, member B2
mm10_v2_chr13_-_45964964_45965001	0.250606	AAAGUGC	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr1_-_77515048_77515102	0.248181	AAAGUGC	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr12_-_87200200_87200284	0.247915	AAAGUGC	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr10_-_31609184_31609184	0.24608	AAAGUGC	ENSMUST00000081989.6|Rnf217|ENSMUSG00000063760.8|ring finger protein 217
mm10_v2_chr5_+_122707546_122707654	0.245675	AAAGUGC	ENSMUST00000081554.6|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000031429.7|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000139631.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000142664.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4
mm10_v2_chr16_-_31275277_31275290	0.244408	AAAGUGC	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr2_+_65845767_65845799	0.240551	AAAGUGC	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr7_+_114415272_114415297	0.239313	AAAGUGC	ENSMUST00000032909.8|Pde3b|ENSMUSG00000030671.8|phosphodiesterase 3B, cGMP-inhibited
mm10_v2_chr13_+_81657732_81657846	0.238258	AAAGUGC	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr6_+_47835650_47835725	0.237469	AAAGUGC	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr11_-_55336561_55336590	0.236928	AAAGUGC	ENSMUST00000068853.6|Fat2|ENSMUSG00000055333.8|FAT tumor suppressor homolog 2 (Drosophila)
mm10_v2_chr12_+_84114321_84114391	0.235971	AAAGUGC	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr6_+_72414301_72414319	0.235723	AAAGUGC	ENSMUST00000065906.7|Ggcx|ENSMUSG00000053460.7|gamma-glutamyl carboxylase
mm10_v2_chr2_+_30952955_30953016	0.233466	AAAGUGC	ENSMUST00000028199.5|Tor1b|ENSMUSG00000026848.8|torsin family 1, member B
mm10_v2_chrX_-_142390334_142390345	0.231936	AAAGUGC	ENSMUST00000112907.1|Acsl4|ENSMUSG00000031278.6|acyl-CoA synthetase long-chain family member 4
mm10_v2_chr11_+_69098937_69098985	0.231008	AAAGUGC	ENSMUST00000021271.7|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr2_+_76675265_76675287	0.22978	AAAGUGC	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr7_-_111082997_111083037	0.229764	AAAGUGC	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr11_-_21370452_21370485	0.228268	AAAGUGC	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr11_-_6475992_6476102	0.227774	AAAGUGC	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr12_+_73901370_73901391	0.225447	AAAGUGC	ENSMUST00000110461.1|Hif1a|ENSMUSG00000021109.7|hypoxia inducible factor 1, alpha subunit
mm10_v2_chr12_+_105784694_105784872	0.221151	AAAGUGC	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr1_+_127774164_127774238	0.220659	AAAGUGC	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr8_+_45507768_45507818	0.219817	AAAGUGC	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr4_+_62965560_62965617	0.211446	AAAGUGC	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chrX_-_78583882_78583901	0.209481	AAAGUGC	ENSMUST00000114025.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000134602.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000114024.2|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1
mm10_v2_chr19_-_28680077_28680122	0.209336	AAAGUGC	ENSMUST00000162022.1|Glis3|ENSMUSG00000052942.7|GLIS family zinc finger 3 	ENSMUST00000112612.2|Glis3|ENSMUSG00000052942.7|GLIS family zinc finger 3
mm10_v2_chr3_+_137867675_137867797	0.207192	AAAGUGC	ENSMUST00000090178.5|Dnajb14|ENSMUSG00000074212.3|DnaJ (Hsp40) homolog, subfamily B, member 14
mm10_v2_chr7_+_123123870_123123901	0.206293	AAAGUGC	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr2_+_168081004_168081035	0.204458	AAAGUGC	ENSMUST00000052125.6|Pard6b|ENSMUSG00000044641.7|par-6 (partitioning defective 6) homolog beta (C. elegans)
mm10_v2_chr13_-_8871696_8871749	0.201629	AAAGUGC	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr12_-_21417356_21417436	0.20083	AAAGUGC	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr8_+_3393018_3393073	0.200784	AAAGUGC	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr8_-_80880479_80880499	0.197116	AAAGUGC	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr15_-_50889691_50889714	0.196812	AAAGUGC	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr2_-_37647199_37647285	0.196807	AAAGUGC	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr8_+_79639618_79639730	0.196551	AAAGUGC	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr14_-_61439831_61439947	0.196216	AAAGUGC	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr18_-_88894322_88894371	0.196034	AAAGUGC	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr5_-_146221426_146221555	0.195444	AAAGUGC	ENSMUST00000161859.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr1_+_6214627_6214683	0.195232	AAAGUGC	ENSMUST00000027040.6|Rb1cc1|ENSMUSG00000025907.8|RB1-inducible coiled-coil 1
mm10_v2_chr10_+_36507013_36507026	0.193235	AAAGUGC	ENSMUST00000168572.1|Hs3st5|ENSMUSG00000044499.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm10_v2_chr5_-_123749371_123749391	0.19265	AAAGUGC	ENSMUST00000182955.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182489.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000050827.7|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr16_-_85173692_85173718	0.191365	AAAGUGC	ENSMUST00000005406.10|App|ENSMUSG00000022892.10|amyloid beta (A4) precursor protein
mm10_v2_chr1_+_132417409_132417464	0.189878	AAAGUGC	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr17_+_26973161_26973219	0.189322	AAAGUGC	ENSMUST00000120016.1|Zbtb9|ENSMUSG00000079605.4|zinc finger and BTB domain containing 9 	ENSMUST00000133257.1|Ggnbp1|ENSMUSG00000048731.8|gametogenetin binding protein 1
mm10_v2_chr13_-_85288999_85289058	0.188079	AAAGUGC	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr14_-_100149764_100149764	0.185917	AAAGUGC	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr17_-_29007925_29007962	0.185393	AAAGUGC	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr8_-_13200576_13200636	0.184909	AAAGUGC	ENSMUST00000165605.2|Grtp1|ENSMUSG00000038515.9|GH regulated TBC protein 1
mm10_v2_chr17_+_88530113_88530142	0.184611	AAAGUGC	ENSMUST00000038551.6|Ppp1r21|ENSMUSG00000034709.7|protein phosphatase 1, regulatory subunit 21
mm10_v2_chrX_-_162159717_162159732	0.184061	AAAGUGC	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chrX_-_103981242_103981287	0.182035	AAAGUGC	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr4_+_58285930_58285975	0.180909	AAAGUGC	ENSMUST00000081919.5|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000102893.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000084578.5|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000098057.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000179951.1|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000098059.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000177951.1|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase
mm10_v2_chr2_-_36104060_36104073	0.179783	AAAGUGC	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chr13_+_9276477_9276620	0.179412	AAAGUGC	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr7_-_98656530_98656600	0.178334	AAAGUGC	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr10_-_17947997_17948098	0.178026	AAAGUGC	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr1_+_75142775_75142797	0.175424	AAAGUGC	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr2_-_18998126_18998202	0.174002	AAAGUGC	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr6_-_22356068_22356175	0.173157	AAAGUGC	ENSMUST00000163963.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C 	ENSMUST00000165576.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C
mm10_v2_chr5_-_140389188_140389254	0.170807	AAAGUGC	ENSMUST00000031539.7|Snx8|ENSMUSG00000029560.8|sorting nexin 8
mm10_v2_chr19_+_23141183_23141263	0.168414	AAAGUGC	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr2_+_155133501_155133559	0.168126	AAAGUGC	ENSMUST00000029126.8|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase 	ENSMUST00000109685.1|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase
mm10_v2_chr11_+_53770014_53770057	0.167994	AAAGUGC	ENSMUST00000108920.2|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000140866.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000108922.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr9_-_97111117_97111159	0.166914	AAAGUGC	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr3_-_69127098_69127113	0.166556	AAAGUGC	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr3_-_142881942_142882017	0.166198	AAAGUGC	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr2_-_60963192_60963251	0.165473	AAAGUGC	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr4_-_147904680_147904710	0.164154	AAAGUGC	ENSMUST00000105716.2|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105715.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105714.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000030884.3|Mfn2|ENSMUSG00000029020.7|mitofusin 2
mm10_v2_chr13_-_98206151_98206186	0.162952	AAAGUGC	ENSMUST00000109426.1|Arhgef28|ENSMUSG00000021662.9|Rho guanine nucleotide exchange factor (GEF) 28
mm10_v2_chr5_-_147725988_147726023	0.160811	AAAGUGC	ENSMUST00000110529.1|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031652.3|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031653.5|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1
mm10_v2_chr3_+_58415689_58415689	0.160171	AAAGUGC	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr2_+_153291404_153291459	0.158226	AAAGUGC	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr2_-_153241402_153241426	0.156028	AAAGUGC	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr4_-_84675275_84675394	0.155969	AAAGUGC	ENSMUST00000176612.1|Bnc2|ENSMUSG00000028487.12|basonuclin 2
mm10_v2_chr4_+_124802543_124802678	0.154899	AAAGUGC	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr2_-_23040177_23040241	0.154894	AAAGUGC	ENSMUST00000114544.3|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000139038.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000126112.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000178908.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000078977.7|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000140164.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000149719.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr1_-_138842429_138842457	0.154349	AAAGUGC	ENSMUST00000112026.2|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9 	ENSMUST00000019374.7|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chr11_+_98863610_98863646	0.15148	AAAGUGC	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr2_-_157204483_157204542	0.149927	AAAGUGC	ENSMUST00000029170.7|Rbl1|ENSMUSG00000027641.7|retinoblastoma-like 1 (p107)
mm10_v2_chr19_-_47692042_47692094	0.148638	AAAGUGC	ENSMUST00000026045.7|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1 	ENSMUST00000086923.5|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1
mm10_v2_chr5_+_31240864_31240941	0.145372	AAAGUGC	ENSMUST00000078312.5|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000031034.5|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000155934.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000152534.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1 	ENSMUST00000139602.1|Nrbp1|ENSMUSG00000029148.9|nuclear receptor binding protein 1
mm10_v2_chr4_+_119539652_119539698	0.144298	AAAGUGC	ENSMUST00000044564.8|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000162267.1|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000106310.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000138845.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3
mm10_v2_chr10_-_76345254_76345371	0.14166	AAAGUGC	ENSMUST00000036033.7|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000160048.1|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000105417.3|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm10_v2_chr12_-_100725028_100725081	0.141601	AAAGUGC	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr15_-_53902472_53902530	0.141522	AAAGUGC	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr11_-_50210765_50210827	0.138384	AAAGUGC	ENSMUST00000143379.1|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000015981.5|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000102774.4|Sqstm1|ENSMUSG00000015837.9|sequestosome 1
mm10_v2_chr9_-_90114812_90114821	0.137874	AAAGUGC	ENSMUST00000085248.5|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1 	ENSMUST00000169860.1|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1
mm10_v2_chr3_-_122984404_122984512	0.137087	AAAGUGC	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr3_-_58692391_58692412	0.135448	AAAGUGC	ENSMUST00000070368.7|Siah2|ENSMUSG00000036432.8|seven in absentia 2
mm10_v2_chr12_-_85339346_85339391	0.133184	AAAGUGC	ENSMUST00000040992.7|Nek9|ENSMUSG00000034290.9|NIMA (never in mitosis gene a)-related expressed kinase 9
mm10_v2_chr10_-_117148474_117148510	0.132332	AAAGUGC	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr1_-_80340480_80340512	0.131992	AAAGUGC	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr9_-_101251810_101251839	0.131786	AAAGUGC	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr9_-_82975475_82975493	0.131221	AAAGUGC	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr10_+_53596936_53597004	0.131133	AAAGUGC	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr9_+_7764041_7764177	0.130275	AAAGUGC	ENSMUST00000052865.9|Tmem123|ENSMUSG00000050912.9|transmembrane protein 123
mm10_v2_chr5_+_139380581_139380707	0.130106	AAAGUGC	ENSMUST00000051293.7|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr19_+_41482632_41482688	0.129841	AAAGUGC	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr11_-_85139939_85140038	0.127963	AAAGUGC	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr4_-_135433744_135433869	0.127411	AAAGUGC	ENSMUST00000156635.1|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3 	ENSMUST00000030606.7|Rcan3|ENSMUSG00000059713.6|regulator of calcineurin 3
mm10_v2_chr9_-_52168111_52168111	0.127224	AAAGUGC	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr15_-_38078842_38078860	0.124068	AAAGUGC	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr7_+_80186835_80186904	0.123901	AAAGUGC	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr14_+_54883377_54883507	0.123671	AAAGUGC	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr3_+_102995709_102995795	0.123666	AAAGUGC	ENSMUST00000029447.5|Sike1|ENSMUSG00000027854.6|suppressor of IKBKE 1 	ENSMUST00000119450.1|Sike1|ENSMUSG00000027854.6|suppressor of IKBKE 1
mm10_v2_chr19_-_12796108_12796146	0.122504	AAAGUGC	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr8_+_84701430_84701497	0.122254	AAAGUGC	ENSMUST00000037165.4|Lyl1|ENSMUSG00000034041.4|lymphoblastomic leukemia 1
mm10_v2_chr14_+_27039001_27039050	0.122205	AAAGUGC	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chrX_+_159255782_159255899	0.120129	AAAGUGC	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr7_-_46919915_46919986	0.117163	AAAGUGC	ENSMUST00000143413.1|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101 	ENSMUST00000014546.8|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101
mm10_v2_chr9_+_75311395_75311395	0.117057	AAAGUGC	ENSMUST00000076889.6|Gnb5|ENSMUSG00000032192.8|guanine nucleotide binding protein (G protein), beta 5
mm10_v2_chr5_-_102069905_102069940	0.116405	AAAGUGC	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr1_-_63114516_63114667	0.115648	AAAGUGC	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr4_-_129641060_129641080	0.11499	AAAGUGC	ENSMUST00000046425.9|Txlna|ENSMUSG00000053841.9|taxilin alpha 	ENSMUST00000133803.1|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr1_+_131827977_131828019	0.114701	AAAGUGC	ENSMUST00000086559.6|Slc41a1|ENSMUSG00000013275.9|solute carrier family 41, member 1
mm10_v2_chr11_+_53350783_53350833	0.114133	AAAGUGC	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr6_-_136171722_136171849	0.109834	AAAGUGC	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr15_-_99820072_99820154	0.109524	AAAGUGC	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr1_-_91931172_91931176	0.109148	AAAGUGC	ENSMUST00000097644.2|Hdac4|ENSMUSG00000073617.2|histone deacetylase 4
mm10_v2_chr3_-_108200807_108200858	0.108923	AAAGUGC	ENSMUST00000106655.1|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1 	ENSMUST00000065664.6|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1
mm10_v2_chr19_+_18749983_18749983	0.107681	AAAGUGC	ENSMUST00000040489.7|Trpm6|ENSMUSG00000024727.8|transient receptor potential cation channel, subfamily M, member 6
mm10_v2_chr1_-_82586781_82586849	0.105858	AAAGUGC	ENSMUST00000087050.5|Col4a4|ENSMUSG00000067158.8|collagen, type IV, alpha 4
mm10_v2_chr5_-_66173051_66173117	0.105832	AAAGUGC	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr10_-_118868903_118868903	0.104924	AAAGUGC	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr16_-_32868325_32868368	0.102941	AAAGUGC	ENSMUST00000089684.3|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene 	ENSMUST00000040986.8|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene 	ENSMUST00000115105.2|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr6_+_38433913_38433965	0.102885	AAAGUGC	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr12_+_80644212_80644265	0.102644	AAAGUGC	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr15_+_101174096_101174148	0.101676	AAAGUGC	ENSMUST00000000544.9|Acvr1b|ENSMUSG00000000532.9|activin A receptor, type 1B
mm10_v2_chr15_+_80711292_80711340	0.101077	AAAGUGC	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr16_-_92826004_92826080	0.0996101	AAAGUGC	ENSMUST00000023673.7|Runx1|ENSMUSG00000022952.10|runt related transcription factor 1
mm10_v2_chr7_+_100706702_100706731	0.0981186	AAAGUGC	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr12_+_84451485_84451518	0.0979458	AAAGUGC	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr5_+_139252314_139252329	0.0967736	AAAGUGC	ENSMUST00000026976.5|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm10_v2_chr12_+_55836365_55836408	0.0936496	AAAGUGC	ENSMUST00000059250.6|Brms1l|ENSMUSG00000012076.7|breast cancer metastasis-suppressor 1-like
mm10_v2_chr1_+_66468364_66468435	0.0923276	AAAGUGC	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr19_+_32757497_32757587	0.0922889	AAAGUGC	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr6_-_120038647_120038699	0.0914023	AAAGUGC	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr4_+_129820702_129820709	0.0913588	AAAGUGC	ENSMUST00000165853.1|Ptp4a2|ENSMUSG00000028788.8|protein tyrosine phosphatase 4a2
mm10_v2_chr17_-_51832666_51832678	0.0912183	AAAGUGC	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chrX_+_162760388_162760421	0.0911066	AAAGUGC	ENSMUST00000033720.5|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7 	ENSMUST00000112327.1|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7
mm10_v2_chr9_+_108002501_108002680	0.090784	AAAGUGC	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr11_-_68853119_68853140	0.0894878	AAAGUGC	ENSMUST00000018880.7|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr14_-_105176860_105176918	0.0882293	AAAGUGC	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr7_-_143740316_143740368	0.0872153	AAAGUGC	ENSMUST00000119499.1|Osbpl5|ENSMUSG00000037606.11|oxysterol binding protein-like 5
mm10_v2_chr11_+_75679259_75679327	0.0840465	AAAGUGC	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr13_+_56702983_56703112	0.0833678	AAAGUGC	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr15_-_94589870_94589889	0.0820219	AAAGUGC	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr12_-_64965496_64965538	0.0808089	AAAGUGC	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr5_-_137786651_137786668	0.0780993	AAAGUGC	ENSMUST00000031740.9|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr7_+_79273201_79273270	0.077315	AAAGUGC	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr17_-_43667015_43667163	0.0733064	AAAGUGC	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr2_+_32606979_32607057	0.073208	AAAGUGC	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr12_-_40037387_40037429	0.072857	AAAGUGC	ENSMUST00000146905.1|Arl4a|ENSMUSG00000047446.12|ADP-ribosylation factor-like 4A
mm10_v2_chr5_-_62766153_62766246	0.0715804	AAAGUGC	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr2_+_164832862_164832878	0.0696956	AAAGUGC	ENSMUST00000103093.3|Ctsa|ENSMUSG00000017760.9|cathepsin A 	ENSMUST00000017904.2|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr3_+_98382438_98382520	0.0688063	AAAGUGC	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chrX_-_74085586_74085652	0.0685937	AAAGUGC	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr19_+_29410919_29410981	0.0685703	AAAGUGC	ENSMUST00000112576.2|Pdcd1lg2|ENSMUSG00000016498.9|programmed cell death 1 ligand 2
mm10_v2_chr19_+_55316313_55316367	0.0684819	AAAGUGC	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr19_+_3767397_3767523	0.067742	AAAGUGC	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr8_-_126593972_126593997	0.0669481	AAAGUGC	ENSMUST00000054960.7|Irf2bp2|ENSMUSG00000051495.7|interferon regulatory factor 2 binding protein 2
mm10_v2_chr9_+_57537518_57537577	0.0619405	AAAGUGC	ENSMUST00000114200.2|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B 	ENSMUST00000093833.4|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B
mm10_v2_chr13_+_111686178_111686210	0.0616967	AAAGUGC	ENSMUST00000109272.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr14_-_36968769_36968793	0.0604562	AAAGUGC	ENSMUST00000090024.4|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr11_-_120437656_120437731	0.0591411	AAAGUGC	ENSMUST00000044271.8|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae) 	ENSMUST00000103017.3|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae)
mm10_v2_chr3_-_107760221_107760249	0.0587706	AAAGUGC	ENSMUST00000153114.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage) 	ENSMUST00000118593.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage) 	ENSMUST00000120243.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage)
mm10_v2_chr3_+_16183177_16183206	0.0587163	AAAGUGC	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr7_-_19271797_19271823	0.0585598	AAAGUGC	ENSMUST00000032561.8|Vasp|ENSMUSG00000030403.8|vasodilator-stimulated phosphoprotein
mm10_v2_chr14_-_16575456_16575501	0.0584188	AAAGUGC	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr13_-_46929718_46929800	0.058062	AAAGUGC	ENSMUST00000056978.7|Kif13a|ENSMUSG00000021375.9|kinesin family member 13A
mm10_v2_chr2_+_152081529_152081624	0.057417	AAAGUGC	ENSMUST00000064061.3|Scrt2|ENSMUSG00000060257.2|scratch homolog 2, zinc finger protein (Drosophila)
mm10_v2_chrX_-_43167817_43167838	0.0562294	AAAGUGC	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr19_-_4928241_4928287	0.0558389	AAAGUGC	ENSMUST00000025851.3|Dpp3|ENSMUSG00000063904.3|dipeptidylpeptidase 3
mm10_v2_chr10_-_8886033_8886076	0.0517942	AAAGUGC	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr15_+_37233036_37233073	0.0498595	AAAGUGC	ENSMUST00000161405.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000022895.8|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000161532.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila)
mm10_v2_chr11_-_4594750_4594820	0.0481163	AAAGUGC	ENSMUST00000109943.3|Mtmr3|ENSMUSG00000034354.11|myotubularin related protein 3
mm10_v2_chr16_-_50432340_50432409	0.0478437	AAAGUGC	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr10_+_95940663_95940703	0.0473179	AAAGUGC	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr15_+_39198244_39198363	0.046493	AAAGUGC	ENSMUST00000082054.5|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2 	ENSMUST00000042917.9|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2
mm10_v2_chr4_+_106316187_106316243	0.0464547	AAAGUGC	ENSMUST00000165709.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000106798.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000094933.4|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24
mm10_v2_chr15_+_102406143_102406380	0.0447852	AAAGUGC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chrX_+_42067836_42067872	0.0425431	AAAGUGC	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr7_+_19119853_19119913	0.0414412	AAAGUGC	ENSMUST00000053109.3|Fbxo46|ENSMUSG00000050428.6|F-box protein 46
mm10_v2_chr4_+_3678108_3678134	0.0390277	AAAGUGC	ENSMUST00000041377.6|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog 	ENSMUST00000103010.3|Lyn|ENSMUSG00000042228.8|Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
mm10_v2_chr3_+_30602056_30602096	0.03878	AAAGUGC	ENSMUST00000047502.7|Mynn|ENSMUSG00000037730.8|myoneurin
mm10_v2_chr17_-_53539411_53539459	0.0370294	AAAGUGC	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr9_-_106887000_106887094	0.036417	AAAGUGC	ENSMUST00000055843.7|Rbm15b|ENSMUSG00000045365.7|RNA binding motif protein 15B
mm10_v2_chr17_+_86753900_86753914	0.0360735	AAAGUGC	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr1_+_93478964_93479108	0.035847	AAAGUGC	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr10_+_96616998_96617015	0.0358242	AAAGUGC	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr6_+_53573364_53573394	0.0356727	AAAGUGC	ENSMUST00000047450.7|Creb5|ENSMUSG00000053007.6|cAMP responsive element binding protein 5
mm10_v2_chr2_+_71117923_71118061	0.0350695	AAAGUGC	ENSMUST00000028403.2|Cybrd1|ENSMUSG00000027015.4|cytochrome b reductase 1
mm10_v2_chr8_-_109737714_109737786	0.0350188	AAAGUGC	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr2_-_52424826_52424916	0.0350128	AAAGUGC	ENSMUST00000036541.7|Arl5a|ENSMUSG00000036093.7|ADP-ribosylation factor-like 5A
mm10_v2_chr2_+_113441064_113441079	0.0346731	AAAGUGC	ENSMUST00000081349.6|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr16_-_23988852_23988852	0.0337099	AAAGUGC	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr12_-_81781121_81781176	0.0334437	AAAGUGC	ENSMUST00000035987.7|Map3k9|ENSMUSG00000042724.7|mitogen-activated protein kinase kinase kinase 9
mm10_v2_chr2_+_71981184_71981287	0.0320579	AAAGUGC	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr14_-_103099499_103099554	0.0305973	AAAGUGC	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr11_+_70844745_70844975	0.0290036	AAAGUGC	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr18_+_36281069_36281151	0.0289305	AAAGUGC	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr6_-_108185552_108185587	0.0282507	AAAGUGC	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr3_-_133544390_133544412	0.0261732	AAAGUGC	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr13_+_49341549_49341623	0.0258291	AAAGUGC	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr11_-_76763550_76763582	0.0249586	AAAGUGC	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chr15_-_81858317_81858328	0.0232826	AAAGUGC	ENSMUST00000050467.7|Tob2|ENSMUSG00000048546.7|transducer of ERBB2, 2
mm10_v2_chr16_-_55934845_55934868	0.021355	AAAGUGC	ENSMUST00000121129.1|Cep97|ENSMUSG00000022604.12|centrosomal protein 97 	ENSMUST00000023270.7|Cep97|ENSMUSG00000022604.12|centrosomal protein 97
mm10_v2_chr5_-_33936301_33936413	0.0211909	AAAGUGC	ENSMUST00000030993.6|Nelfa|ENSMUSG00000029111.6|negative elongation factor complex member A, Whsc2
mm10_v2_chr19_-_46395722_46395756	0.0190027	AAAGUGC	ENSMUST00000040270.4|Actr1a|ENSMUSG00000025228.4|ARP1 actin-related protein 1A, centractin alpha
mm10_v2_chr10_+_20148920_20149014	0.0177861	AAAGUGC	ENSMUST00000116259.3|Map7|ENSMUSG00000019996.10|microtubule-associated protein 7
mm10_v2_chrX_+_98149666_98149721	0.0161025	AAAGUGC	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr12_-_102878406_102878449	0.0160259	AAAGUGC	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr5_+_29569208_29569267	0.0154796	AAAGUGC	ENSMUST00000049453.4|Ube3c|ENSMUSG00000039000.4|ubiquitin protein ligase E3C
mm10_v2_chr18_-_53744509_53744629	0.012741	AAAGUGC	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr5_+_23434435_23434471	0.00995537	AAAGUGC	ENSMUST00000094962.2|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E 	ENSMUST00000115128.1|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E
mm10_v2_chr1_+_132007606_132007634	0.00914092	AAAGUGC	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr18_+_20247340_20247340	0.00732227	AAAGUGC	ENSMUST00000054128.6|Dsg1c|ENSMUSG00000034774.6|desmoglein 1 gamma
mm10_v2_chr5_-_114273702_114273807	0.00635638	AAAGUGC	ENSMUST00000144050.1|Foxn4|ENSMUSG00000042002.5|forkhead box N4 	ENSMUST00000044790.5|Foxn4|ENSMUSG00000042002.5|forkhead box N4
mm10_v2_chr12_+_85288591_85288712	0.00475446	AAAGUGC	ENSMUST00000059341.4|Zc2hc1c|ENSMUSG00000045064.4|zinc finger, C2HC-type containing 1C
mm10_v2_chr2_+_85050439_85050500	0.0036703	AAAGUGC	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr12_+_16894894_16894978	0.00363405	AAAGUGC	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr6_-_128143525_128143594	0.00147706	AAAGUGC	ENSMUST00000032503.5|Tspan9|ENSMUSG00000030352.8|tetraspanin 9 	ENSMUST00000112173.1|Tspan9|ENSMUSG00000030352.8|tetraspanin 9
