mm10_v2_chr9_-_16378231_16378231	0.614736	AACACUG	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr13_-_63565520_63565520	0.595544	AACACUG	ENSMUST00000021921.5|Ptch1|ENSMUSG00000021466.6|patched homolog 1
mm10_v2_chr19_+_28835074_28835116	0.57004	AACACUG	ENSMUST00000025875.4|Slc1a1|ENSMUSG00000024935.4|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm10_v2_chr18_-_47368830_47368878	0.542015	AACACUG	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr1_+_158362261_158362304	0.516744	AACACUG	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr11_-_119547744_119547759	0.51512	AACACUG	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr18_+_10325148_10325222	0.512014	AACACUG	ENSMUST00000048977.8|Greb1l|ENSMUSG00000042942.9|growth regulation by estrogen in breast cancer-like
mm10_v2_chr4_+_11156411_11156453	0.475204	AACACUG	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr9_+_95559817_95559960	0.444038	AACACUG	ENSMUST00000079597.5|Paqr9|ENSMUSG00000064225.5|progestin and adipoQ receptor family member IX
mm10_v2_chr1_-_9700209_9700329	0.437694	AACACUG	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr9_+_72806874_72806874	0.414346	AACACUG	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr15_+_93398344_93398464	0.413512	AACACUG	ENSMUST00000109256.3|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000068457.7|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000049122.8|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000165935.1|Pphln1|ENSMUSG00000036167.9|periphilin 1
mm10_v2_chr4_-_91372028_91372069	0.40826	AACACUG	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr7_+_141475240_141475256	0.406722	AACACUG	ENSMUST00000026585.7|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr17_-_34627365_34627525	0.399097	AACACUG	ENSMUST00000064953.8|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000170345.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000171121.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000168391.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169067.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr12_+_40446050_40446099	0.38681	AACACUG	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr13_-_74062262_74062315	0.378639	AACACUG	ENSMUST00000036456.6|Cep72|ENSMUSG00000021572.8|centrosomal protein 72
mm10_v2_chr18_+_5591860_5591902	0.363068	AACACUG	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr12_-_108275409_108275417	0.343523	AACACUG	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr1_+_187997821_187997834	0.332605	AACACUG	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr18_+_22345089_22345089	0.324872	AACACUG	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr5_+_76840597_76840637	0.315015	AACACUG	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr14_+_45219993_45219993	0.31196	AACACUG	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr6_+_124712279_124712353	0.298703	AACACUG	ENSMUST00000004375.9|Phb2|ENSMUSG00000004264.11|prohibitin 2
mm10_v2_chr14_+_11553523_11553542	0.291811	AACACUG	ENSMUST00000022264.6|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr11_+_68691906_68691915	0.286917	AACACUG	ENSMUST00000102611.3|Myh10|ENSMUSG00000020900.9|myosin, heavy polypeptide 10, non-muscle
mm10_v2_chr7_+_130577334_130577484	0.240804	AACACUG	ENSMUST00000059145.7|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2 	ENSMUST00000084513.4|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr3_+_68468162_68468209	0.233274	AACACUG	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr7_+_27258725_27258815	0.220157	AACACUG	ENSMUST00000079258.6|Numbl|ENSMUSG00000063160.6|numb-like
mm10_v2_chr9_-_48835932_48835962	0.21914	AACACUG	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr13_-_43304153_43304213	0.218093	AACACUG	ENSMUST00000055341.5|Gfod1|ENSMUSG00000051335.5|glucose-fructose oxidoreductase domain containing 1
mm10_v2_chr11_-_90390895_90390926	0.21755	AACACUG	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr1_+_156558844_156559049	0.214493	AACACUG	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr2_-_42653598_42653598	0.214108	AACACUG	ENSMUST00000052550.6|Lrp1b|ENSMUSG00000049252.11|low density lipoprotein-related protein 1B (deleted in tumors)
mm10_v2_chr4_+_101419277_101419332	0.209359	AACACUG	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr18_-_77565050_77565162	0.20552	AACACUG	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr12_+_29528382_29528468	0.204991	AACACUG	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr3_+_96557950_96557968	0.20136	AACACUG	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr13_+_75839868_75839881	0.197076	AACACUG	ENSMUST00000022082.7|Glrx|ENSMUSG00000021591.7|glutaredoxin
mm10_v2_chr2_-_45113255_45113279	0.196438	AACACUG	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr10_-_62880014_62880014	0.180787	AACACUG	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr4_+_57637816_57637846	0.178226	AACACUG	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr18_+_4921662_4921726	0.178052	AACACUG	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr14_+_27622433_27622543	0.175125	AACACUG	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr6_-_143947092_143947111	0.171534	AACACUG	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr9_+_47530173_47530373	0.170762	AACACUG	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr14_-_100149764_100149764	0.169779	AACACUG	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr10_-_68278713_68278735	0.167291	AACACUG	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr5_+_3343893_3343945	0.16517	AACACUG	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr12_-_31634592_31634677	0.162821	AACACUG	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr18_+_42511496_42511521	0.156673	AACACUG	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chrX_+_166238901_166238914	0.152977	AACACUG	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr15_-_79441999_79442065	0.150765	AACACUG	ENSMUST00000117786.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon 	ENSMUST00000120859.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon
mm10_v2_chr5_-_135934590_135934613	0.148172	AACACUG	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr4_+_28813125_28813136	0.148127	AACACUG	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr18_+_32377176_32377289	0.147664	AACACUG	ENSMUST00000091967.5|Bin1|ENSMUSG00000024381.9|bridging integrator 1 	ENSMUST00000025239.7|Bin1|ENSMUSG00000024381.9|bridging integrator 1
mm10_v2_chr7_-_133015248_133015329	0.147321	AACACUG	ENSMUST00000169570.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr11_-_65788275_65788318	0.143014	AACACUG	ENSMUST00000152096.1|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4 	ENSMUST00000046963.3|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4
mm10_v2_chr9_+_113812547_113812621	0.14058	AACACUG	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr14_-_49783327_49783394	0.140197	AACACUG	ENSMUST00000118129.1|3632451O06Rik|ENSMUSG00000036242.8|RIKEN cDNA 3632451O06 gene 	ENSMUST00000036972.6|3632451O06Rik|ENSMUSG00000036242.8|RIKEN cDNA 3632451O06 gene
mm10_v2_chr11_-_84525514_84525542	0.133748	AACACUG	ENSMUST00000018842.7|Lhx1|ENSMUSG00000018698.9|LIM homeobox protein 1
mm10_v2_chr12_-_108003594_108003613	0.132786	AACACUG	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr6_+_8948608_8948619	0.132505	AACACUG	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr12_-_27342696_27342726	0.12863	AACACUG	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr15_-_12592556_12592556	0.128214	AACACUG	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr6_+_14901344_14901364	0.124754	AACACUG	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr12_+_117516479_117516534	0.122177	AACACUG	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr17_+_8165501_8165540	0.121998	AACACUG	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr3_+_95929246_95929298	0.121529	AACACUG	ENSMUST00000165307.1|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENSMUST00000015893.6|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm10_v2_chr14_-_79771305_79771318	0.121279	AACACUG	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr6_+_117863069_117863103	0.119542	AACACUG	ENSMUST00000079405.8|Zfp239|ENSMUSG00000042097.11|zinc finger protein 239 	ENSMUST00000172088.1|Zfp239|ENSMUSG00000042097.11|zinc finger protein 239
mm10_v2_chr12_-_98737405_98737515	0.119387	AACACUG	ENSMUST00000170188.1|Ptpn21|ENSMUSG00000021009.8|protein tyrosine phosphatase, non-receptor type 21
mm10_v2_chr13_-_40733768_40733836	0.119203	AACACUG	ENSMUST00000110193.2|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr2_+_153031852_153032014	0.114106	AACACUG	ENSMUST00000037235.6|Xkr7|ENSMUSG00000042631.7|X Kell blood group precursor related family member 7 homolog
mm10_v2_chr14_+_48120841_48120869	0.112987	AACACUG	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr4_+_127021311_127021339	0.112893	AACACUG	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr3_-_144570136_144570227	0.112038	AACACUG	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr2_-_104816696_104816792	0.110709	AACACUG	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr3_-_57294880_57294899	0.110526	AACACUG	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr7_-_116038734_116038750	0.109655	AACACUG	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr4_-_103215147_103215201	0.10797	AACACUG	ENSMUST00000150285.1|Slc35d1|ENSMUSG00000028521.11|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm10_v2_chr9_+_65908967_65909020	0.107869	AACACUG	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr11_+_105589970_105590028	0.105213	AACACUG	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr8_+_46163651_46163729	0.10425	AACACUG	ENSMUST00000034048.6|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene 	ENSMUST00000145229.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr14_-_67072465_67072476	0.102026	AACACUG	ENSMUST00000089230.5|Ppp2r2a|ENSMUSG00000022052.8|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
mm10_v2_chr11_-_116335384_116335399	0.101671	AACACUG	ENSMUST00000036215.7|Foxj1|ENSMUSG00000034227.7|forkhead box J1
mm10_v2_chr3_-_123236134_123236157	0.10144	AACACUG	ENSMUST00000106427.1|Synpo2|ENSMUSG00000050315.7|synaptopodin 2 	ENSMUST00000106426.1|Synpo2|ENSMUSG00000050315.7|synaptopodin 2 	ENSMUST00000051443.5|Synpo2|ENSMUSG00000050315.7|synaptopodin 2
mm10_v2_chr4_-_49845549_49845549	0.0984616	AACACUG	ENSMUST00000093859.4|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A 	ENSMUST00000076674.3|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A
mm10_v2_chr7_-_73541738_73541758	0.0979208	AACACUG	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr2_-_137116624_137116644	0.0977282	AACACUG	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr3_+_116594959_116595031	0.096846	AACACUG	ENSMUST00000029571.8|Sass6|ENSMUSG00000027959.9|spindle assembly 6 homolog (C. elegans)
mm10_v2_chr16_-_78576649_78576666	0.0963458	AACACUG	ENSMUST00000114220.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114219.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114218.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed
mm10_v2_chr5_+_91517615_91517694	0.0952338	AACACUG	ENSMUST00000040576.9|Parm1|ENSMUSG00000034981.9|prostate androgen-regulated mucin-like protein 1
mm10_v2_chr2_-_3475027_3475086	0.0941098	AACACUG	ENSMUST00000027956.2|Suv39h2|ENSMUSG00000026646.10|suppressor of variegation 3-9 homolog 2 (Drosophila)
mm10_v2_chr17_+_86167777_86167795	0.093368	AACACUG	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr2_-_6130117_6130211	0.0925998	AACACUG	ENSMUST00000126551.1|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000054254.5|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000114942.2|Proser2|ENSMUSG00000045319.7|proline and serine rich 2
mm10_v2_chr11_-_98149551_98149621	0.092567	AACACUG	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr9_-_72111827_72111895	0.0905367	AACACUG	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr15_-_56694525_56694554	0.0893705	AACACUG	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr5_-_138279960_138280016	0.088392	AACACUG	ENSMUST00000014089.7|Gpc2|ENSMUSG00000029510.9|glypican 2 (cerebroglycan) 	ENSMUST00000161827.1|Gpc2|ENSMUSG00000029510.9|glypican 2 (cerebroglycan)
mm10_v2_chr2_-_24763047_24763153	0.088034	AACACUG	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr5_+_108065742_108065767	0.0875267	AACACUG	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr3_-_138143352_138143396	0.0872158	AACACUG	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr4_+_11191726_11191789	0.0868546	AACACUG	ENSMUST00000029866.9|Ccne2|ENSMUSG00000028212.10|cyclin E2 	ENSMUST00000108324.3|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr9_-_45955226_45955250	0.0862941	AACACUG	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr8_-_125492710_125492710	0.086067	AACACUG	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr11_-_76846968_76847045	0.0857318	AACACUG	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr17_-_74294834_74294883	0.0847176	AACACUG	ENSMUST00000078459.6|Memo1|ENSMUSG00000058704.7|mediator of cell motility 1
mm10_v2_chr19_-_59345746_59345853	0.0830911	AACACUG	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr2_-_25983236_25983290	0.0829004	AACACUG	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr11_-_61579637_61579707	0.0810101	AACACUG	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr4_+_40143080_40143107	0.0801745	AACACUG	ENSMUST00000102973.3|Aco1|ENSMUSG00000028405.9|aconitase 1
mm10_v2_chr10_+_20312461_20312492	0.0801029	AACACUG	ENSMUST00000092678.3|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1 	ENSMUST00000043881.5|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1
mm10_v2_chr11_+_111066154_111066174	0.0800467	AACACUG	ENSMUST00000042970.2|Kcnj2|ENSMUSG00000041695.2|potassium inwardly-rectifying channel, subfamily J, member 2
mm10_v2_chr16_+_44394771_44394804	0.0798644	AACACUG	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chr14_+_17660956_17660963	0.0795907	AACACUG	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr1_-_176807124_176807124	0.079152	AACACUG	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr5_-_86172747_86172803	0.078922	AACACUG	ENSMUST00000039373.7|Uba6|ENSMUSG00000035898.7|ubiquitin-like modifier activating enzyme 6
mm10_v2_chr1_-_54926311_54926402	0.0784114	AACACUG	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr7_+_16875302_16875392	0.0779066	AACACUG	ENSMUST00000108493.1|Dact3|ENSMUSG00000078794.3|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm10_v2_chr9_-_44881274_44881323	0.0776207	AACACUG	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr5_-_129008546_129008596	0.076396	AACACUG	ENSMUST00000031378.7|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr4_+_148591482_148591546	0.0756493	AACACUG	ENSMUST00000006611.8|Srm|ENSMUSG00000006442.10|spermidine synthase
mm10_v2_chr16_+_42907563_42907684	0.0735994	AACACUG	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr15_-_44428303_44428337	0.0726161	AACACUG	ENSMUST00000038719.6|Nudcd1|ENSMUSG00000038736.9|NudC domain containing 1
mm10_v2_chrX_-_164076100_164076150	0.071919	AACACUG	ENSMUST00000037928.2|Siah1b|ENSMUSG00000040749.5|seven in absentia 1B 	ENSMUST00000071667.2|Siah1b|ENSMUSG00000040749.5|seven in absentia 1B
mm10_v2_chr4_+_65604984_65605052	0.0713891	AACACUG	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr11_-_87359011_87359081	0.0709473	AACACUG	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr2_-_73529725_73529736	0.0707752	AACACUG	ENSMUST00000094681.4|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr11_-_80080928_80081001	0.0706155	AACACUG	ENSMUST00000103233.3|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3 	ENSMUST00000061283.8|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3
mm10_v2_chr18_+_69345721_69345811	0.069677	AACACUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr3_+_63976106_63976135	0.0685418	AACACUG	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr4_+_21931291_21931366	0.0684586	AACACUG	ENSMUST00000029908.7|Faxc|ENSMUSG00000028246.7|failed axon connections homolog (Drosophila)
mm10_v2_chr2_+_91710900_91710970	0.0669522	AACACUG	ENSMUST00000142692.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1 	ENSMUST00000090608.5|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1
mm10_v2_chr18_+_10725530_10725564	0.0663187	AACACUG	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr2_-_33431324_33431324	0.0657301	AACACUG	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr1_-_74124420_74124466	0.0653495	AACACUG	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr14_-_8666236_8666279	0.0647258	AACACUG	ENSMUST00000102996.3|4930452B06Rik|ENSMUSG00000021747.11|RIKEN cDNA 4930452B06 gene
mm10_v2_chr2_-_168601620_168601657	0.0638851	AACACUG	ENSMUST00000171689.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000137451.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr2_-_156111954_156111978	0.0637512	AACACUG	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr9_-_86880414_86880467	0.062449	AACACUG	ENSMUST00000074501.5|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000098495.3|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000074468.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000036347.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr8_-_104443001_104443047	0.0624181	AACACUG	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr15_+_4375462_4375511	0.0620916	AACACUG	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr6_-_83441674_83441684	0.0620847	AACACUG	ENSMUST00000089622.4|Tet3|ENSMUSG00000034832.9|tet methylcytosine dioxygenase 3
mm10_v2_chr9_+_59291565_59291577	0.0610085	AACACUG	ENSMUST00000026266.7|Adpgk|ENSMUSG00000025236.10|ADP-dependent glucokinase
mm10_v2_chr9_-_97111117_97111159	0.0604899	AACACUG	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr9_-_123632545_123632565	0.0603284	AACACUG	ENSMUST00000026273.8|Slc6a20b|ENSMUSG00000025243.8|solute carrier family 6 (neurotransmitter transporter), member 20B
mm10_v2_chr13_-_47106176_47106206	0.060254	AACACUG	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr4_-_132212255_132212303	0.0594501	AACACUG	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr12_-_73047179_73047179	0.0592206	AACACUG	ENSMUST00000050029.7|Six1|ENSMUSG00000051367.8|sine oculis-related homeobox 1
mm10_v2_chr7_+_92741603_92741715	0.0588069	AACACUG	ENSMUST00000032879.7|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family
mm10_v2_chr11_-_78245942_78245987	0.0583244	AACACUG	ENSMUST00000002121.4|Supt6|ENSMUSG00000002052.6|suppressor of Ty 6
mm10_v2_chr17_+_3114957_3114982	0.0580977	AACACUG	ENSMUST00000076734.6|Scaf8|ENSMUSG00000046201.8|SR-related CTD-associated factor 8
mm10_v2_chr3_-_57575760_57575836	0.0575701	AACACUG	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr11_+_93886157_93886219	0.0570716	AACACUG	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr13_-_103764502_103764505	0.0568303	AACACUG	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chrX_-_157598656_157598715	0.0566893	AACACUG	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr2_+_29965560_29965717	0.055709	AACACUG	ENSMUST00000113717.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113719.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000100225.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113741.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000095083.4|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000046257.7|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1
mm10_v2_chr2_-_12419456_12419474	0.0551671	AACACUG	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr10_+_128747850_128747895	0.0550544	AACACUG	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr19_+_47579602_47579681	0.0541158	AACACUG	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr8_-_85432841_85432859	0.0537825	AACACUG	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr8_+_109868586_109868611	0.0537012	AACACUG	ENSMUST00000179721.1|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2 	ENSMUST00000034175.4|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2
mm10_v2_chr5_+_108461222_108461241	0.0533034	AACACUG	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr8_+_65618009_65618091	0.0515938	AACACUG	ENSMUST00000110258.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110256.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110255.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr2_+_15055274_15055379	0.0513463	AACACUG	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr18_-_38601268_38601355	0.0507267	AACACUG	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr11_-_49712674_49712726	0.0500575	AACACUG	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr11_+_93996082_93996103	0.0498713	AACACUG	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr5_+_150259922_150259936	0.0494979	AACACUG	ENSMUST00000087204.5|Fry|ENSMUSG00000056602.8|furry homolog (Drosophila)
mm10_v2_chr6_-_90810118_90810160	0.0494909	AACACUG	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr10_+_60106198_60106221	0.0476622	AACACUG	ENSMUST00000121820.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr1_+_166379097_166379097	0.0468876	AACACUG	ENSMUST00000027846.7|Tada1|ENSMUSG00000026563.7|transcriptional adaptor 1
mm10_v2_chr13_-_113618549_113618565	0.0468866	AACACUG	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr12_+_72536342_72536396	0.0464787	AACACUG	ENSMUST00000044352.6|Pcnxl4|ENSMUSG00000034501.6|pecanex-like 4 (Drosophila)
mm10_v2_chr7_+_19076242_19076273	0.0461222	AACACUG	ENSMUST00000032570.7|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif 	ENSMUST00000108479.1|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif
mm10_v2_chr11_+_77686155_77686179	0.0454456	AACACUG	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr5_+_137518880_137518880	0.0453457	AACACUG	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr1_-_119053619_119053638	0.0451594	AACACUG	ENSMUST00000062483.8|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr18_+_11052487_11052510	0.0450037	AACACUG	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr12_-_54862783_54862921	0.0447806	AACACUG	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr11_+_21091291_21091339	0.0444605	AACACUG	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chr9_-_27155418_27155425	0.0443742	AACACUG	ENSMUST00000167074.1|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3 	ENSMUST00000034472.8|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3
mm10_v2_chr1_-_152090308_152090332	0.04417	AACACUG	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr9_+_120303896_120303960	0.0440664	AACACUG	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr6_+_134981998_134982002	0.0438168	AACACUG	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr11_-_102819114_102819214	0.0432688	AACACUG	ENSMUST00000068933.5|Gjc1|ENSMUSG00000034520.8|gap junction protein, gamma 1
mm10_v2_chrX_-_7188713_7188743	0.0432335	AACACUG	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr4_+_57845240_57845265	0.0426766	AACACUG	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr9_-_65827544_65827576	0.0425235	AACACUG	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr11_+_96302595_96302595	0.041886	AACACUG	ENSMUST00000049272.3|Hoxb5|ENSMUSG00000038700.3|homeobox B5
mm10_v2_chr2_+_68861433_68861510	0.0418534	AACACUG	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr7_+_59228743_59228769	0.0416402	AACACUG	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr11_-_75348261_75348324	0.0412868	AACACUG	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chr4_-_108301045_108301107	0.0408673	AACACUG	ENSMUST00000043616.6|Zyg11b|ENSMUSG00000034636.9|zyg-ll family member B, cell cycle regulator
mm10_v2_chr14_+_79587691_79587712	0.0403275	AACACUG	ENSMUST00000054908.8|Sugt1|ENSMUSG00000022024.9|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm10_v2_chr5_+_150673739_150673827	0.0402182	AACACUG	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr2_+_60209887_60210073	0.0398371	AACACUG	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr18_-_78123324_78123426	0.0398104	AACACUG	ENSMUST00000160292.1|Slc14a1|ENSMUSG00000059336.8|solute carrier family 14 (urea transporter), member 1 	ENSMUST00000091813.5|Slc14a1|ENSMUSG00000059336.8|solute carrier family 14 (urea transporter), member 1
mm10_v2_chr7_+_36698002_36698118	0.0389269	AACACUG	ENSMUST00000021641.6|Tshz3|ENSMUSG00000021217.6|teashirt zinc finger family member 3
mm10_v2_chr4_+_59626189_59626253	0.0388454	AACACUG	ENSMUST00000070150.4|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene 	ENSMUST00000052420.6|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene
mm10_v2_chr5_+_143464493_143464536	0.0382379	AACACUG	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chr2_-_94010807_94010823	0.0374664	AACACUG	ENSMUST00000111240.1|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli)
mm10_v2_chr13_-_89742490_89742515	0.0373	AACACUG	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr15_+_92051153_92051170	0.0366458	AACACUG	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr14_+_31251454_31251530	0.0356543	AACACUG	ENSMUST00000022458.4|Bap1|ENSMUSG00000021901.4|Brca1 associated protein 1
mm10_v2_chr8_+_128359065_128359085	0.0355577	AACACUG	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr13_-_105054895_105054930	0.0354346	AACACUG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr2_+_152226839_152226908	0.0336288	AACACUG	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr5_-_110448486_110448519	0.0336178	AACACUG	ENSMUST00000069483.5|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr11_+_53567361_53567526	0.0319048	AACACUG	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr16_-_16560201_16560223	0.0316144	AACACUG	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr1_-_4496400_4496420	0.0311273	AACACUG	ENSMUST00000027035.3|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr8_+_105225145_105225193	0.0311063	AACACUG	ENSMUST00000034361.3|D230025D16Rik|ENSMUSG00000031889.3|RIKEN cDNA D230025D16 gene
mm10_v2_chr4_+_97777606_97777632	0.0308612	AACACUG	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr5_+_28317121_28317220	0.0292248	AACACUG	ENSMUST00000090355.4|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000114884.1|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000059644.6|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000030920.4|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33
mm10_v2_chr6_-_35539765_35539888	0.0288347	AACACUG	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr5_-_66618772_66618828	0.0287738	AACACUG	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr4_-_135494615_135494628	0.0287576	AACACUG	ENSMUST00000102549.3|Nipal3|ENSMUSG00000028803.12|NIPA-like domain containing 3
mm10_v2_chr2_-_73312701_73312724	0.028491	AACACUG	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr7_-_99353104_99353230	0.0279251	AACACUG	ENSMUST00000169437.1|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1 	ENSMUST00000094154.4|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm10_v2_chr11_+_97362396_97362551	0.0276591	AACACUG	ENSMUST00000045540.3|Socs7|ENSMUSG00000038485.5|suppressor of cytokine signaling 7
mm10_v2_chr1_-_181211437_181211552	0.0273874	AACACUG	ENSMUST00000162963.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26 	ENSMUST00000162819.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr16_+_33185045_33185153	0.0267159	AACACUG	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr5_-_25498702_25498745	0.0264869	AACACUG	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr6_-_13608011_13608100	0.0264541	AACACUG	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr18_+_53862087_53862143	0.0257174	AACACUG	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr11_-_22982090_22982382	0.0256739	AACACUG	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr12_+_51348019_51348061	0.0252191	AACACUG	ENSMUST00000054308.6|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr11_+_80428598_80428656	0.0249749	AACACUG	ENSMUST00000173938.1|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENSMUST00000017572.7|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
mm10_v2_chr7_-_118491912_118491975	0.0238634	AACACUG	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr7_-_89338709_89338795	0.0232916	AACACUG	ENSMUST00000137723.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000117852.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000041968.3|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135
mm10_v2_chr19_+_36834215_36834297	0.0231464	AACACUG	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr4_-_129189512_129189594	0.0230396	AACACUG	ENSMUST00000117965.1|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000106061.2|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000072431.6|S100pbp|ENSMUSG00000040928.9|S100P binding protein
mm10_v2_chr12_-_84218835_84218890	0.0218074	AACACUG	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr9_-_27030010_27030114	0.0211777	AACACUG	ENSMUST00000034470.9|Vps26b|ENSMUSG00000031988.9|vacuolar protein sorting 26 homolog B (yeast)
mm10_v2_chr5_+_86804214_86804276	0.0207366	AACACUG	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr18_-_31447383_31447415	0.0202274	AACACUG	ENSMUST00000025110.3|Syt4|ENSMUSG00000024261.5|synaptotagmin IV
mm10_v2_chr5_-_149053038_149053053	0.019312	AACACUG	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr5_-_29478470_29478597	0.0183398	AACACUG	ENSMUST00000001608.7|Mnx1|ENSMUSG00000001566.8|motor neuron and pancreas homeobox 1 	ENSMUST00000165512.2|Mnx1|ENSMUSG00000001566.8|motor neuron and pancreas homeobox 1
mm10_v2_chr10_-_5922385_5922407	0.0181835	AACACUG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr17_+_88440711_88440741	0.0181602	AACACUG	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chr15_+_80711292_80711340	0.0180568	AACACUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr2_+_30237680_30237747	0.0165352	AACACUG	ENSMUST00000113654.1|Lrrc8a|ENSMUSG00000007476.12|leucine rich repeat containing 8A 	ENSMUST00000095078.2|Lrrc8a|ENSMUSG00000007476.12|leucine rich repeat containing 8A
mm10_v2_chr3_-_51277470_51277514	0.0164414	AACACUG	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr4_-_118134869_118134962	0.0160436	AACACUG	ENSMUST00000097912.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000030263.2|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000106410.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3
mm10_v2_chr2_+_119547697_119547762	0.015378	AACACUG	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr1_-_30949756_30949770	0.0152115	AACACUG	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr10_+_56377300_56377338	0.0151513	AACACUG	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr12_+_69893105_69893105	0.014756	AACACUG	ENSMUST00000021466.8|Atl1|ENSMUSG00000021066.8|atlastin GTPase 1
mm10_v2_chr3_+_137864573_137864613	0.0146147	AACACUG	ENSMUST00000174561.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z 	ENSMUST00000173790.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z
mm10_v2_chr19_+_37207528_37207587	0.0145979	AACACUG	ENSMUST00000024078.7|March5|ENSMUSG00000023307.7|membrane-associated ring finger (C3HC4) 5 	ENSMUST00000112391.1|March5|ENSMUSG00000023307.7|membrane-associated ring finger (C3HC4) 5
mm10_v2_chr17_+_28952425_28952688	0.0143185	AACACUG	ENSMUST00000118762.1|Kctd20|ENSMUSG00000005936.12|potassium channel tetramerisation domain containing 20 	ENSMUST00000057174.8|Kctd20|ENSMUSG00000005936.12|potassium channel tetramerisation domain containing 20 	ENSMUST00000122163.1|Kctd20|ENSMUSG00000005936.12|potassium channel tetramerisation domain containing 20 	ENSMUST00000153831.1|Kctd20|ENSMUSG00000005936.12|potassium channel tetramerisation domain containing 20
mm10_v2_chr3_-_103791537_103791563	0.0138269	AACACUG	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr5_+_118560719_118560719	0.0133971	AACACUG	ENSMUST00000100816.4|Med13l|ENSMUSG00000018076.9|mediator complex subunit 13-like
mm10_v2_chr15_+_58933774_58933836	0.013186	AACACUG	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr2_+_129800451_129800526	0.0130784	AACACUG	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr1_-_136346074_136346145	0.0126858	AACACUG	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr11_+_97415527_97415538	0.0123685	AACACUG	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr11_-_51606840_51606857	0.0121439	AACACUG	ENSMUST00000074669.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000101249.2|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000109103.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B
mm10_v2_chr17_-_31855782_31855802	0.0119174	AACACUG	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chrX_-_51018011_51018032	0.0112038	AACACUG	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr1_+_136131382_136131404	0.0111501	AACACUG	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chrX_+_6577259_6577294	0.0109639	AACACUG	ENSMUST00000089520.2|Shroom4|ENSMUSG00000068270.9|shroom family member 4
mm10_v2_chrX_-_41911877_41911912	0.0108055	AACACUG	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chr8_+_3393018_3393073	0.00964095	AACACUG	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr7_+_127485221_127485221	0.00933965	AACACUG	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr18_-_53744509_53744629	0.00901087	AACACUG	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr9_-_48495321_48495335	0.00886156	AACACUG	ENSMUST00000170000.2|Rbm7|ENSMUSG00000042396.9|RNA binding motif protein 7
mm10_v2_chr2_-_181459364_181459439	0.00848051	AACACUG	ENSMUST00000155535.1|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000029106.6|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46 	ENSMUST00000087409.3|Zbtb46|ENSMUSG00000027583.7|zinc finger and BTB domain containing 46
mm10_v2_chr17_-_32284088_32284123	0.00820838	AACACUG	ENSMUST00000119123.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000003726.8|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000121285.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000120276.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000114475.2|Brd4|ENSMUSG00000024002.10|bromodomain containing 4
mm10_v2_chr16_-_67620880_67620922	0.00801644	AACACUG	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr12_+_55836365_55836408	0.00731431	AACACUG	ENSMUST00000059250.6|Brms1l|ENSMUSG00000012076.7|breast cancer metastasis-suppressor 1-like
mm10_v2_chr18_-_54990124_54990180	0.00726361	AACACUG	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr12_-_83487708_83487729	0.00695016	AACACUG	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr3_-_127409044_127409064	0.00687202	AACACUG	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr10_-_94944578_94944578	0.00677183	AACACUG	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr11_+_17159263_17159357	0.0063688	AACACUG	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr8_-_115707778_115707794	0.00583102	AACACUG	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr18_+_35562158_35562174	0.00517566	AACACUG	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr2_+_37452231_37452286	0.00513719	AACACUG	ENSMUST00000148470.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000066055.3|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000112920.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr9_+_35421541_35421616	0.00485611	AACACUG	ENSMUST00000119129.2|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr16_-_50432340_50432409	0.00455562	AACACUG	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr3_+_30602056_30602096	0.00444605	AACACUG	ENSMUST00000047502.7|Mynn|ENSMUSG00000037730.8|myoneurin
mm10_v2_chr10_-_116581478_116581511	0.00427494	AACACUG	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr15_+_58415456_58415512	0.00353941	AACACUG	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr4_-_126256226_126256370	0.00342252	AACACUG	ENSMUST00000122129.1|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000061143.8|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000106132.2|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1
mm10_v2_chr16_+_91729281_91729390	0.0032163	AACACUG	ENSMUST00000114001.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113999.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000064797.5|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000114002.2|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000095909.3|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000056482.7|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113996.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A)
mm10_v2_chr18_-_21300129_21300168	0.00300397	AACACUG	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr16_+_16983382_16983416	0.00278255	AACACUG	ENSMUST00000069107.7|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1 	ENSMUST00000023462.6|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1
mm10_v2_chr7_+_51621830_51621891	0.00248202	AACACUG	ENSMUST00000032710.5|Slc17a6|ENSMUSG00000030500.5|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm10_v2_chr12_+_70825492_70825514	0.00224743	AACACUG	ENSMUST00000057859.7|Frmd6|ENSMUSG00000048285.8|FERM domain containing 6
mm10_v2_chr3_-_100489324_100489354	0.00204304	AACACUG	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
mm10_v2_chr11_+_100574904_100574982	0.00162428	AACACUG	ENSMUST00000103120.4|Cnp|ENSMUSG00000006782.10|2',3'-cyclic nucleotide 3' phosphodiesterase
mm10_v2_chr10_+_29211637_29211649	0.00156116	AACACUG	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr6_+_86438360_86438405	0.00152478	AACACUG	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr19_+_53600377_53600435	0.00136401	AACACUG	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr16_+_92058270_92058328	0.0010404	AACACUG	ENSMUST00000047429.8|Mrps6|ENSMUSG00000039680.9|mitochondrial ribosomal protein S6 	ENSMUST00000113975.2|Slc5a3|ENSMUSG00000089774.2|solute carrier family 5 (inositol transporters), member 3
mm10_v2_chr14_+_14012491_14012693	0.000897564	AACACUG	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr6_+_29348069_29348123	0.000883843	AACACUG	ENSMUST00000173216.1|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000031779.10|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000090481.7|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr11_-_5741141_5741182	0.000591107	AACACUG	ENSMUST00000140922.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000093362.5|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr4_-_44167580_44167608	0.000152036	AACACUG	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
