mm10_v2_chr4_+_17853451_17853474	0.412914	AACAGUC	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr19_-_24861828_24861855	0.397204	AACAGUC	ENSMUST00000047666.4|Pgm5|ENSMUSG00000041731.7|phosphoglucomutase 5
mm10_v2_chr3_+_88532314_88532396	0.379803	AACAGUC	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chrX_+_73639414_73639436	0.37264	AACAGUC	ENSMUST00000019701.8|Dusp9|ENSMUSG00000031383.8|dual specificity phosphatase 9
mm10_v2_chr19_+_44989073_44989101	0.361746	AACAGUC	ENSMUST00000026225.8|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr5_+_76840597_76840637	0.309425	AACAGUC	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr18_-_47368830_47368878	0.291777	AACAGUC	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr15_-_78718113_78718113	0.254672	AACAGUC	ENSMUST00000088592.4|Elfn2|ENSMUSG00000043460.6|leucine rich repeat and fibronectin type III, extracellular 2
mm10_v2_chr13_-_28953690_28953713	0.248966	AACAGUC	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr6_-_143947092_143947111	0.246439	AACAGUC	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr8_+_95352258_95352329	0.224255	AACAGUC	ENSMUST00000034243.5|Mmp15|ENSMUSG00000031790.7|matrix metallopeptidase 15
mm10_v2_chr9_+_32116040_32116136	0.217768	AACAGUC	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr10_-_121311034_121311189	0.21407	AACAGUC	ENSMUST00000064107.5|Tbc1d30|ENSMUSG00000052302.5|TBC1 domain family, member 30
mm10_v2_chr11_-_45944910_45944960	0.204232	AACAGUC	ENSMUST00000129820.1|Lsm11|ENSMUSG00000044847.7|U7 snRNP-specific Sm-like protein LSM11
mm10_v2_chr17_-_46282991_46283026	0.195662	AACAGUC	ENSMUST00000180283.1|Tjap1|ENSMUSG00000012296.9|tight junction associated protein 1 	ENSMUST00000012440.6|Tjap1|ENSMUSG00000012296.9|tight junction associated protein 1 	ENSMUST00000164342.2|Tjap1|ENSMUSG00000012296.9|tight junction associated protein 1
mm10_v2_chr5_+_98854434_98854466	0.186676	AACAGUC	ENSMUST00000031278.4|Bmp3|ENSMUSG00000029335.4|bone morphogenetic protein 3
mm10_v2_chr16_+_7069825_7069846	0.186408	AACAGUC	ENSMUST00000056416.7|Rbfox1|ENSMUSG00000008658.9|RNA binding protein, fox-1 homolog (C. elegans) 1
mm10_v2_chr2_-_65567465_65567495	0.184223	AACAGUC	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr8_-_73353477_73353551	0.179077	AACAGUC	ENSMUST00000119826.1|Large|ENSMUSG00000004383.11|like-glycosyltransferase
mm10_v2_chr17_-_45549655_45549677	0.166295	AACAGUC	ENSMUST00000180252.1|Tmem151b|ENSMUSG00000096847.1|transmembrane protein 151B
mm10_v2_chr3_+_37639945_37639964	0.157552	AACAGUC	ENSMUST00000108109.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila) 	ENSMUST00000038569.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila)
mm10_v2_chr13_-_63565520_63565520	0.148078	AACAGUC	ENSMUST00000021921.5|Ptch1|ENSMUSG00000021466.6|patched homolog 1
mm10_v2_chr18_+_14783238_14783259	0.146805	AACAGUC	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr6_+_14901344_14901364	0.14419	AACAGUC	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr8_+_13339656_13339674	0.131601	AACAGUC	ENSMUST00000170909.1|Tfdp1|ENSMUSG00000038482.10|transcription factor Dp 1
mm10_v2_chr15_+_101224207_101224231	0.129458	AACAGUC	ENSMUST00000000543.4|Grasp|ENSMUSG00000000531.4|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
mm10_v2_chr19_-_10240689_10240751	0.125674	AACAGUC	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr4_+_48585135_48585187	0.12393	AACAGUC	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr11_+_3330401_3330541	0.121821	AACAGUC	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr12_-_84218835_84218890	0.1193	AACAGUC	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr12_-_71136611_71136701	0.113954	AACAGUC	ENSMUST00000021486.8|Timm9|ENSMUSG00000021079.9|translocase of inner mitochondrial membrane 9 	ENSMUST00000166120.1|Timm9|ENSMUSG00000021079.9|translocase of inner mitochondrial membrane 9
mm10_v2_chr15_-_73184840_73184971	0.113426	AACAGUC	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr4_+_13743424_13743478	0.113133	AACAGUC	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr16_+_42907563_42907684	0.11013	AACAGUC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr15_-_53902472_53902530	0.108112	AACAGUC	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr2_+_65620829_65620857	0.105421	AACAGUC	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr11_+_77216180_77216287	0.104941	AACAGUC	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr14_-_46822232_46822266	0.0978237	AACAGUC	ENSMUST00000111817.1|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta 	ENSMUST00000079314.5|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta
mm10_v2_chr14_-_103346765_103346841	0.0972278	AACAGUC	ENSMUST00000159855.1|Mycbp2|ENSMUSG00000033004.8|MYC binding protein 2
mm10_v2_chr5_-_135934590_135934613	0.0942532	AACAGUC	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr1_-_178337774_178337797	0.0916834	AACAGUC	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr11_-_98149551_98149621	0.0908781	AACAGUC	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr19_+_36926071_36926177	0.0884931	AACAGUC	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chr7_-_78578308_78578408	0.0853231	AACAGUC	ENSMUST00000039431.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr15_-_102516806_102517064	0.0838073	AACAGUC	ENSMUST00000169162.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000023812.2|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000165174.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169367.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169377.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr9_-_67559703_67559703	0.0831353	AACAGUC	ENSMUST00000040025.7|Tln2|ENSMUSG00000052698.8|talin 2
mm10_v2_chr12_+_40446050_40446099	0.0824721	AACAGUC	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr2_-_51149100_51149115	0.0814074	AACAGUC	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr3_-_110142996_110143010	0.081399	AACAGUC	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr4_+_108460000_108460030	0.080806	AACAGUC	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr19_-_23448322_23448350	0.0803997	AACAGUC	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr3_+_61364507_61364633	0.0802694	AACAGUC	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr7_-_127021205_127021216	0.0792999	AACAGUC	ENSMUST00000159916.1|Prrt2|ENSMUSG00000045114.7|proline-rich transmembrane protein 2
mm10_v2_chr10_-_45470201_45470260	0.0776722	AACAGUC	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr2_-_45113255_45113279	0.0759521	AACAGUC	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr7_-_116038734_116038750	0.0743715	AACAGUC	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr2_+_133552159_133552237	0.0713152	AACAGUC	ENSMUST00000028836.6|Bmp2|ENSMUSG00000027358.6|bone morphogenetic protein 2
mm10_v2_chr1_-_134079114_134079120	0.0693227	AACAGUC	ENSMUST00000020692.6|Btg2|ENSMUSG00000020423.6|B cell translocation gene 2, anti-proliferative
mm10_v2_chr18_+_35598607_35598653	0.0692114	AACAGUC	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr5_+_147430407_147430545	0.0684752	AACAGUC	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr5_+_108461222_108461241	0.0680161	AACAGUC	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr1_-_105356658_105356714	0.0672761	AACAGUC	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr7_+_63444741_63444762	0.0658517	AACAGUC	ENSMUST00000058476.7|Otud7a|ENSMUSG00000033510.8|OTU domain containing 7A
mm10_v2_chr16_+_11322876_11322911	0.0616839	AACAGUC	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_130577334_130577484	0.0614518	AACAGUC	ENSMUST00000059145.7|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2 	ENSMUST00000084513.4|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr9_+_118606687_118606751	0.0602095	AACAGUC	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr1_+_91053422_91053520	0.0559863	AACAGUC	ENSMUST00000097650.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000068167.6|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000097649.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1
mm10_v2_chr15_+_96287518_96287604	0.0552121	AACAGUC	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr1_+_134560190_134560213	0.0534318	AACAGUC	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr10_-_42276744_42276763	0.0529521	AACAGUC	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr4_+_108619925_108619994	0.052163	AACAGUC	ENSMUST00000030320.6|Cc2d1b|ENSMUSG00000028582.8|coiled-coil and C2 domain containing 1B
mm10_v2_chr11_-_116027961_116027978	0.0513449	AACAGUC	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chrX_-_168123311_168123334	0.0512057	AACAGUC	ENSMUST00000112149.1|Frmpd4|ENSMUSG00000049176.8|FERM and PDZ domain containing 4
mm10_v2_chr6_+_40110251_40110251	0.0496963	AACAGUC	ENSMUST00000061740.7|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr7_-_81706905_81706964	0.0493024	AACAGUC	ENSMUST00000026922.7|Homer2|ENSMUSG00000025813.7|homer homolog 2 (Drosophila)
mm10_v2_chr9_-_81633828_81633828	0.0489583	AACAGUC	ENSMUST00000183482.1|Htr1b|ENSMUSG00000049511.5|5-hydroxytryptamine (serotonin) receptor 1B
mm10_v2_chr12_+_117516479_117516534	0.047996	AACAGUC	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr11_-_100472725_100472759	0.0478654	AACAGUC	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr17_-_10840285_10840311	0.0452183	AACAGUC	ENSMUST00000041463.6|Pacrg|ENSMUSG00000037196.6|PARK2 co-regulated
mm10_v2_chrX_-_95166307_95166539	0.044802	AACAGUC	ENSMUST00000113873.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113876.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113885.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113883.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182001.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113882.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113878.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182562.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9
mm10_v2_chr8_+_125012986_125013006	0.0434128	AACAGUC	ENSMUST00000075896.6|Tsnax|ENSMUSG00000056820.6|translin-associated factor X
mm10_v2_chr3_-_119783262_119783388	0.0428233	AACAGUC	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr12_-_54862783_54862921	0.0426058	AACAGUC	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr2_-_130638094_130638113	0.0421021	AACAGUC	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr8_-_70439557_70439612	0.0420397	AACAGUC	ENSMUST00000076615.5|Crtc1|ENSMUSG00000003575.7|CREB regulated transcription coactivator 1
mm10_v2_chr1_-_189343704_189343832	0.041267	AACAGUC	ENSMUST00000180044.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2 	ENSMUST00000110920.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2
mm10_v2_chr13_-_107022027_107022138	0.0410566	AACAGUC	ENSMUST00000117539.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000122233.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000022204.9|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000159772.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A
mm10_v2_chr2_-_20968881_20968957	0.0410539	AACAGUC	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr9_+_14276301_14276347	0.0403215	AACAGUC	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr1_-_64121456_64121491	0.0403194	AACAGUC	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr5_-_32854185_32854256	0.0396725	AACAGUC	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr14_-_98169542_98169595	0.0396284	AACAGUC	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr12_+_4133047_4133126	0.0387615	AACAGUC	ENSMUST00000124505.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3
mm10_v2_chr10_-_123196916_123196961	0.0383017	AACAGUC	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr12_-_27342696_27342726	0.0360071	AACAGUC	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr17_-_81649607_81649607	0.0348233	AACAGUC	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr4_+_127021311_127021339	0.0340676	AACAGUC	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr2_-_66410064_66410134	0.0322108	AACAGUC	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr17_-_80480435_80480462	0.0297134	AACAGUC	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr18_+_10725530_10725564	0.0277048	AACAGUC	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr18_-_82692734_82692933	0.0271251	AACAGUC	ENSMUST00000182122.1|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236 	ENSMUST00000171071.2|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236
mm10_v2_chr16_-_46010212_46010223	0.0268974	AACAGUC	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr5_+_117976761_117976803	0.0263327	AACAGUC	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr1_-_51915968_51916071	0.0258838	AACAGUC	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr4_-_133753611_133753666	0.0251551	AACAGUC	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr17_+_78200240_78200258	0.0250729	AACAGUC	ENSMUST00000112498.2|Crim1|ENSMUSG00000024074.7|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm10_v2_chr5_+_108065742_108065767	0.024045	AACAGUC	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr4_+_83525540_83525616	0.0235481	AACAGUC	ENSMUST00000053414.6|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171 	ENSMUST00000126429.1|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171
mm10_v2_chr19_+_21778325_21778363	0.0230094	AACAGUC	ENSMUST00000096194.2|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2 	ENSMUST00000025663.6|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2
mm10_v2_chr11_-_61579637_61579707	0.0212756	AACAGUC	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr14_-_45318556_45318579	0.0209286	AACAGUC	ENSMUST00000022378.7|Ero1l|ENSMUSG00000021831.8|ERO1-like (S. cerevisiae)
mm10_v2_chr10_-_120979327_120979373	0.0208936	AACAGUC	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr5_+_137518880_137518880	0.02034	AACAGUC	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr2_-_103797617_103797662	0.0202848	AACAGUC	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr12_-_76822510_76822558	0.0201637	AACAGUC	ENSMUST00000021459.7|Rab15|ENSMUSG00000021062.9|RAB15, member RAS oncogene family
mm10_v2_chr11_+_107479478_107479544	0.0201323	AACAGUC	ENSMUST00000021063.6|Psmd12|ENSMUSG00000020720.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENSMUST00000106752.3|Psmd12|ENSMUSG00000020720.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
mm10_v2_chr6_+_120364094_120364163	0.0197008	AACAGUC	ENSMUST00000100996.3|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A 	ENSMUST00000005108.7|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A
mm10_v2_chr2_-_33431324_33431324	0.0196551	AACAGUC	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr11_+_88047693_88047727	0.0196497	AACAGUC	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr12_+_59066908_59066931	0.019278	AACAGUC	ENSMUST00000021381.4|Pnn|ENSMUSG00000020994.4|pinin
mm10_v2_chr5_+_115011111_115011208	0.0192448	AACAGUC	ENSMUST00000031530.5|Sppl3|ENSMUSG00000029550.8|signal peptide peptidase 3
mm10_v2_chr4_-_34882919_34882964	0.01909	AACAGUC	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr1_-_193035651_193035728	0.0189281	AACAGUC	ENSMUST00000016344.7|Syt14|ENSMUSG00000016200.8|synaptotagmin XIV
mm10_v2_chr9_-_108190352_108190420	0.0186516	AACAGUC	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr5_+_117413977_117414011	0.0181083	AACAGUC	ENSMUST00000180430.1|Ksr2|ENSMUSG00000061578.8|kinase suppressor of ras 2
mm10_v2_chr2_+_31572701_31572725	0.01759	AACAGUC	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr13_-_113618549_113618565	0.0173958	AACAGUC	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr12_+_3807017_3807063	0.0169597	AACAGUC	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr10_-_120476469_120476527	0.01633	AACAGUC	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr12_-_31499541_31499616	0.0163159	AACAGUC	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr7_+_112679314_112679325	0.0148225	AACAGUC	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr13_+_14613242_14613272	0.0144433	AACAGUC	ENSMUST00000170836.2|Psma2|ENSMUSG00000015671.10|proteasome (prosome, macropain) subunit, alpha type 2
mm10_v2_chr17_-_46831413_46831413	0.0143379	AACAGUC	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chr9_+_69989466_69989539	0.0141887	AACAGUC	ENSMUST00000034754.5|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000085393.6|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000117450.1|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2
mm10_v2_chr8_-_104443001_104443047	0.0140478	AACAGUC	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr4_-_126468580_126468653	0.0128591	AACAGUC	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr3_+_137864573_137864613	0.0125653	AACAGUC	ENSMUST00000174561.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z 	ENSMUST00000173790.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z
mm10_v2_chr3_-_108911687_108911746	0.0122284	AACAGUC	ENSMUST00000029480.8|Prpf38b|ENSMUSG00000027881.8|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm10_v2_chr10_-_40883073_40883143	0.0120912	AACAGUC	ENSMUST00000044166.7|Cdc40|ENSMUSG00000038446.7|cell division cycle 40
mm10_v2_chr12_-_102878406_102878449	0.0119753	AACAGUC	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr16_-_85901118_85901133	0.0117799	AACAGUC	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chr12_+_3426857_3426931	0.0114942	AACAGUC	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr2_-_57114970_57115038	0.0112857	AACAGUC	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr2_-_134554348_134554369	0.0112234	AACAGUC	ENSMUST00000028704.2|Hao1|ENSMUSG00000027261.2|hydroxyacid oxidase 1, liver
mm10_v2_chr5_-_140830430_140830453	0.0105672	AACAGUC	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr10_-_117376955_117376978	0.0101594	AACAGUC	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr4_+_101496648_101496722	0.00880599	AACAGUC	ENSMUST00000106930.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000154120.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr8_-_85555261_85555315	0.00858353	AACAGUC	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr1_+_152954966_152955101	0.00844027	AACAGUC	ENSMUST00000043313.8|Nmnat2|ENSMUSG00000042751.8|nicotinamide nucleotide adenylyltransferase 2
mm10_v2_chr10_-_40302186_40302206	0.00778451	AACAGUC	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr15_+_58415456_58415512	0.00701662	AACAGUC	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr11_+_50376982_50377004	0.00635616	AACAGUC	ENSMUST00000109142.1|Hnrnph1|ENSMUSG00000007850.10|heterogeneous nuclear ribonucleoprotein H1
mm10_v2_chr16_+_37868383_37868481	0.00607562	AACAGUC	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr18_+_35562158_35562174	0.005797	AACAGUC	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr11_+_7063423_7063496	0.0053611	AACAGUC	ENSMUST00000020706.4|Adcy1|ENSMUSG00000020431.5|adenylate cyclase 1
mm10_v2_chr16_-_50432340_50432409	0.0048285	AACAGUC	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr13_-_105054895_105054930	0.00377619	AACAGUC	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr4_-_72200833_72200928	0.00376222	AACAGUC	ENSMUST00000102848.2|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000072695.6|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000107337.1|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000074216.7|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm10_v2_chr16_+_16983382_16983416	0.00359298	AACAGUC	ENSMUST00000069107.7|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1 	ENSMUST00000023462.6|Mapk1|ENSMUSG00000063358.9|mitogen-activated protein kinase 1
mm10_v2_chr17_+_74395607_74395639	0.00347901	AACAGUC	ENSMUST00000179074.1|Slc30a6|ENSMUSG00000024069.6|solute carrier family 30 (zinc transporter), member 6 	ENSMUST00000024870.6|Slc30a6|ENSMUSG00000024069.6|solute carrier family 30 (zinc transporter), member 6
mm10_v2_chr4_+_155491353_155491411	0.00344029	AACAGUC	ENSMUST00000165335.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000105616.3|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000030940.7|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr13_+_42052015_42052072	0.00308602	AACAGUC	ENSMUST00000060148.5|Hivep1|ENSMUSG00000021366.7|human immunodeficiency virus type I enhancer binding protein 1
mm10_v2_chr9_+_70542872_70542920	0.00268327	AACAGUC	ENSMUST00000049263.7|Sltm|ENSMUSG00000032212.9|SAFB-like, transcription modulator
mm10_v2_chr11_-_95309557_95309602	0.002065	AACAGUC	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr9_+_52047150_52047163	0.000812999	AACAGUC	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr14_-_20388822_20388912	0.000645795	AACAGUC	ENSMUST00000022345.6|Dnajc9|ENSMUSG00000021811.6|DnaJ (Hsp40) homolog, subfamily C, member 9
mm10_v2_chr11_-_51756378_51756618	3.90316e-07	AACAGUC	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
