mm10_v2_chr4_+_54947976_54948054	0.430624	ACAGUAU	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr7_-_134938264_134938430	0.349458	ACAGUAU	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr5_+_16553488_16553550	0.307627	ACAGUAU	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr11_+_16752203_16752215	0.306315	ACAGUAU	ENSMUST00000102884.3|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor 	ENSMUST00000020329.6|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor
mm10_v2_chr14_-_24245913_24245925	0.277125	ACAGUAU	ENSMUST00000073687.6|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila) 	ENSMUST00000090398.4|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila)
mm10_v2_chr10_+_82985473_82985504	0.270246	ACAGUAU	ENSMUST00000040110.7|Chst11|ENSMUSG00000034612.7|carbohydrate sulfotransferase 11
mm10_v2_chr1_-_158958367_158958367	0.269378	ACAGUAU	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr15_+_99392882_99392903	0.263817	ACAGUAU	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr5_+_73491026_73491110	0.254694	ACAGUAU	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr14_+_62837679_62837726	0.253634	ACAGUAU	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr1_+_191325912_191325984	0.241361	ACAGUAU	ENSMUST00000027940.5|Tmem206|ENSMUSG00000026627.7|transmembrane protein 206
mm10_v2_chr10_-_71159676_71159708	0.234309	ACAGUAU	ENSMUST00000014473.5|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila) 	ENSMUST00000143791.1|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila)
mm10_v2_chr6_+_107529717_107529780	0.230203	ACAGUAU	ENSMUST00000049285.8|Lrrn1|ENSMUSG00000034648.8|leucine rich repeat protein 1, neuronal
mm10_v2_chr8_-_89044162_89044195	0.21875	ACAGUAU	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr14_-_72709986_72710027	0.2123	ACAGUAU	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr10_-_20725023_20725078	0.195403	ACAGUAU	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr4_-_134704235_134704295	0.194075	ACAGUAU	ENSMUST00000054096.6|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1 	ENSMUST00000038628.3|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1
mm10_v2_chr13_+_89540636_89540678	0.189124	ACAGUAU	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr1_-_59237093_59237256	0.18719	ACAGUAU	ENSMUST00000163058.1|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile) 	ENSMUST00000027178.6|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile)
mm10_v2_chr7_-_66427469_66427517	0.175971	ACAGUAU	ENSMUST00000015278.7|Aldh1a3|ENSMUSG00000015134.8|aldehyde dehydrogenase family 1, subfamily A3
mm10_v2_chr6_-_4086914_4086972	0.172099	ACAGUAU	ENSMUST00000049166.4|Bet1|ENSMUSG00000032757.4|blocked early in transport 1 homolog (S. cerevisiae)
mm10_v2_chr18_-_16809233_16809324	0.171912	ACAGUAU	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr3_-_107518001_107518023	0.171464	ACAGUAU	ENSMUST00000169449.1|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17 	ENSMUST00000029499.8|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17
mm10_v2_chr11_-_119086221_119086250	0.171297	ACAGUAU	ENSMUST00000026665.7|Cbx4|ENSMUSG00000039989.7|chromobox 4
mm10_v2_chr9_+_100643448_100643542	0.164503	ACAGUAU	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr5_-_143732273_143732316	0.154646	ACAGUAU	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chr3_+_31902666_31902703	0.151786	ACAGUAU	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr18_-_4352944_4352962	0.149998	ACAGUAU	ENSMUST00000025078.2|Map3k8|ENSMUSG00000024235.4|mitogen-activated protein kinase kinase kinase 8
mm10_v2_chr12_+_52516077_52516077	0.141345	ACAGUAU	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr5_-_113993873_113993902	0.132401	ACAGUAU	ENSMUST00000159592.1|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr2_+_23068168_23068241	0.129514	ACAGUAU	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr1_+_23761926_23761999	0.128138	ACAGUAU	ENSMUST00000063663.5|B3gat2|ENSMUSG00000026156.8|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm10_v2_chr1_+_174501796_174501843	0.127022	ACAGUAU	ENSMUST00000030039.7|Fmn2|ENSMUSG00000028354.8|formin 2
mm10_v2_chr4_+_65124174_65124174	0.126502	ACAGUAU	ENSMUST00000084501.3|Pappa|ENSMUSG00000028370.7|pregnancy-associated plasma protein A
mm10_v2_chr19_+_48206025_48206163	0.125911	ACAGUAU	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr9_+_72925622_72925671	0.122188	ACAGUAU	ENSMUST00000038489.5|Pygo1|ENSMUSG00000034910.5|pygopus 1
mm10_v2_chr18_-_58209926_58210067	0.121033	ACAGUAU	ENSMUST00000025497.6|Fbn2|ENSMUSG00000024598.8|fibrillin 2
mm10_v2_chr4_-_128806045_128806167	0.120684	ACAGUAU	ENSMUST00000106072.2|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362 	ENSMUST00000170934.1|Zfp362|ENSMUSG00000028799.9|zinc finger protein 362
mm10_v2_chr12_-_12941827_12941914	0.120067	ACAGUAU	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr2_+_166805506_166805605	0.118459	ACAGUAU	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm10_v2_chr9_-_121704996_121705041	0.11793	ACAGUAU	ENSMUST00000078547.4|Sec22c|ENSMUSG00000061536.6|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm10_v2_chr5_+_76588663_76588742	0.11689	ACAGUAU	ENSMUST00000121979.1|Cep135|ENSMUSG00000036403.9|centrosomal protein 135
mm10_v2_chr5_-_122779278_122779434	0.115788	ACAGUAU	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr3_+_59006978_59006978	0.114075	ACAGUAU	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr19_-_34879452_34879465	0.113969	ACAGUAU	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr17_+_79614900_79614900	0.113538	ACAGUAU	ENSMUST00000040368.2|Rmdn2|ENSMUSG00000036368.7|regulator of microtubule dynamics 2
mm10_v2_chr12_-_75735729_75735736	0.11209	ACAGUAU	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr16_+_41532999_41533069	0.110777	ACAGUAU	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr7_+_56050135_56050217	0.11065	ACAGUAU	ENSMUST00000076226.6|Herc2|ENSMUSG00000030451.9|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm10_v2_chr17_-_64331817_64331957	0.109875	ACAGUAU	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr17_+_72836678_72836717	0.108845	ACAGUAU	ENSMUST00000045174.5|Ypel5|ENSMUSG00000039770.5|yippee-like 5 (Drosophila)
mm10_v2_chr8_-_111259192_111259221	0.106632	ACAGUAU	ENSMUST00000169020.1|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1 	ENSMUST00000003404.8|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1
mm10_v2_chr18_+_67933257_67933257	0.106396	ACAGUAU	ENSMUST00000063775.3|Ldlrad4|ENSMUSG00000024544.8|low density lipoprotein receptor class A domain containing 4
mm10_v2_chr10_+_41519493_41519516	0.104077	ACAGUAU	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr8_+_23411490_23411507	0.102542	ACAGUAU	ENSMUST00000033952.7|Sfrp1|ENSMUSG00000031548.7|secreted frizzled-related protein 1
mm10_v2_chr8_+_107150621_107150690	0.100625	ACAGUAU	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr9_+_35211155_35211224	0.100478	ACAGUAU	ENSMUST00000034541.5|Srpr|ENSMUSG00000032042.5|signal recognition particle receptor ('docking protein')
mm10_v2_chr16_-_9994921_9995012	0.0996394	ACAGUAU	ENSMUST00000115835.1|Grin2a|ENSMUSG00000059003.6|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm10_v2_chr9_-_14614949_14615034	0.098962	ACAGUAU	ENSMUST00000013220.6|Amotl1|ENSMUSG00000013076.9|angiomotin-like 1 	ENSMUST00000160770.1|Amotl1|ENSMUSG00000013076.9|angiomotin-like 1
mm10_v2_chr17_-_66077022_66077081	0.0982233	ACAGUAU	ENSMUST00000150766.1|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12 	ENSMUST00000038116.5|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12
mm10_v2_chr4_-_70534904_70534987	0.0982048	ACAGUAU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr13_+_43398375_43398402	0.0980467	ACAGUAU	ENSMUST00000071926.3|Nol7|ENSMUSG00000063200.3|nucleolar protein 7
mm10_v2_chr11_-_66525964_66525964	0.0975508	ACAGUAU	ENSMUST00000066679.6|Shisa6|ENSMUSG00000053930.7|shisa homolog 6 (Xenopus laevis)
mm10_v2_chr14_-_93888732_93888732	0.0935046	ACAGUAU	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr1_+_150100093_150100124	0.0929443	ACAGUAU	ENSMUST00000035065.7|Ptgs2|ENSMUSG00000032487.7|prostaglandin-endoperoxide synthase 2
mm10_v2_chr19_+_3851797_3851811	0.0921372	ACAGUAU	ENSMUST00000072055.6|Chka|ENSMUSG00000024843.9|choline kinase alpha
mm10_v2_chr14_-_16575456_16575501	0.0885629	ACAGUAU	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chrX_-_142390334_142390345	0.087323	ACAGUAU	ENSMUST00000112907.1|Acsl4|ENSMUSG00000031278.6|acyl-CoA synthetase long-chain family member 4
mm10_v2_chr11_-_89302545_89302567	0.0872912	ACAGUAU	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr2_+_109917639_109917656	0.086755	ACAGUAU	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr6_-_52234902_52234960	0.0866574	ACAGUAU	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr1_-_164458345_164458363	0.0860594	ACAGUAU	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr9_+_118506226_118506318	0.0860305	ACAGUAU	ENSMUST00000084820.4|Golga4|ENSMUSG00000038708.9|golgi autoantigen, golgin subfamily a, 4
mm10_v2_chr17_-_84187939_84187954	0.084964	ACAGUAU	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chr10_-_110000219_110000219	0.0844294	ACAGUAU	ENSMUST00000032719.7|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr4_+_57434247_57434368	0.0822009	ACAGUAU	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr1_+_177444653_177444669	0.080697	ACAGUAU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr16_-_18586959_18586970	0.0806663	ACAGUAU	ENSMUST00000009241.5|Tbx1|ENSMUSG00000009097.9|T-box 1
mm10_v2_chr18_-_10610124_10610144	0.0794007	ACAGUAU	ENSMUST00000097670.3|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr6_+_97807014_97807067	0.0767878	ACAGUAU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr9_+_56994932_56994986	0.0749305	ACAGUAU	ENSMUST00000034832.6|Ptpn9|ENSMUSG00000032290.6|protein tyrosine phosphatase, non-receptor type 9
mm10_v2_chr3_-_108562349_108562466	0.0747724	ACAGUAU	ENSMUST00000090546.5|Tmem167b|ENSMUSG00000068732.5|transmembrane protein 167B
mm10_v2_chr2_+_155381808_155381884	0.0734066	ACAGUAU	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr2_+_79635352_79635410	0.0721013	ACAGUAU	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr6_+_95117740_95117880	0.0716683	ACAGUAU	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr18_+_75820174_75820210	0.0716148	ACAGUAU	ENSMUST00000058997.7|Zbtb7c|ENSMUSG00000044646.8|zinc finger and BTB domain containing 7C
mm10_v2_chr5_+_146231211_146231385	0.0715404	ACAGUAU	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr17_-_12992188_12992226	0.0708578	ACAGUAU	ENSMUST00000159986.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr19_-_47464406_47464450	0.0708351	ACAGUAU	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr5_-_36695969_36696041	0.0682965	ACAGUAU	ENSMUST00000031091.9|D5Ertd579e|ENSMUSG00000029190.13|DNA segment, Chr 5, ERATO Doi 579, expressed 	ENSMUST00000140063.1|D5Ertd579e|ENSMUSG00000029190.13|DNA segment, Chr 5, ERATO Doi 579, expressed
mm10_v2_chr19_-_29805989_29806009	0.0660933	ACAGUAU	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr4_-_3938354_3938401	0.0654399	ACAGUAU	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr1_-_176275274_176275308	0.0646114	ACAGUAU	ENSMUST00000111166.1|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5 	ENSMUST00000065967.7|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5
mm10_v2_chr18_+_38993126_38993186	0.0631771	ACAGUAU	ENSMUST00000097593.2|Arhgap26|ENSMUSG00000036452.11|Rho GTPase activating protein 26
mm10_v2_chr9_-_75409352_75409383	0.0623199	ACAGUAU	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr5_+_43233463_43233491	0.0597723	ACAGUAU	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chrX_+_38316177_38316193	0.059437	ACAGUAU	ENSMUST00000016471.2|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide 	ENSMUST00000115134.1|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm10_v2_chr11_-_78697370_78697475	0.0567338	ACAGUAU	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr12_-_91849081_91849157	0.0554528	ACAGUAU	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr5_+_129941949_129942113	0.0539581	ACAGUAU	ENSMUST00000051758.7|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1 	ENSMUST00000073945.4|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1
mm10_v2_chr3_+_135438722_135438780	0.0539362	ACAGUAU	ENSMUST00000166033.1|Ube2d3|ENSMUSG00000078578.3|ubiquitin-conjugating enzyme E2D 3
mm10_v2_chr18_-_23041641_23041671	0.0535997	ACAGUAU	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr6_-_13839916_13839942	0.0534508	ACAGUAU	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chrX_-_13846508_13846591	0.0534482	ACAGUAU	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr18_+_35771488_35771559	0.053202	ACAGUAU	ENSMUST00000170693.1|Ube2d2a|ENSMUSG00000091896.1|ubiquitin-conjugating enzyme E2D 2A
mm10_v2_chr2_-_23040177_23040241	0.0516654	ACAGUAU	ENSMUST00000114544.3|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000139038.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000126112.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000178908.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000078977.7|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000140164.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000149719.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr10_-_118868903_118868903	0.0515524	ACAGUAU	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr3_+_28781305_28781344	0.0511374	ACAGUAU	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr4_-_129672712_129672774	0.0509748	ACAGUAU	ENSMUST00000102590.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr6_+_113077354_113077382	0.0507167	ACAGUAU	ENSMUST00000042889.5|Setd5|ENSMUSG00000034269.6|SET domain containing 5
mm10_v2_chr5_+_66968416_66968447	0.050287	ACAGUAU	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr3_+_52268337_52268388	0.0498965	ACAGUAU	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr8_-_91313223_91313279	0.0494322	ACAGUAU	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr7_-_81454751_81454764	0.0493119	ACAGUAU	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr14_+_18271122_18271186	0.0485788	ACAGUAU	ENSMUST00000132374.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1 	ENSMUST00000133460.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1
mm10_v2_chr10_-_30655859_30655868	0.048448	ACAGUAU	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr3_-_84304762_84304809	0.0483741	ACAGUAU	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr5_+_72914264_72914304	0.0483442	ACAGUAU	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr15_-_43170809_43170834	0.0475019	ACAGUAU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr2_-_63184253_63184292	0.0474067	ACAGUAU	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr7_+_114415272_114415297	0.0472943	ACAGUAU	ENSMUST00000032909.8|Pde3b|ENSMUSG00000030671.8|phosphodiesterase 3B, cGMP-inhibited
mm10_v2_chr3_+_31095052_31095125	0.0472363	ACAGUAU	ENSMUST00000118470.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000029194.5|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000123532.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000117728.1|Skil|ENSMUSG00000027660.10|SKI-like
mm10_v2_chr1_+_32172711_32172806	0.0471459	ACAGUAU	ENSMUST00000027226.5|Khdrbs2|ENSMUSG00000026058.5|KH domain containing, RNA binding, signal transduction associated 2
mm10_v2_chr5_+_114568016_114568016	0.0470282	ACAGUAU	ENSMUST00000043650.7|Fam222a|ENSMUSG00000041930.7|family with sequence similarity 222, member A
mm10_v2_chr7_-_34389540_34389638	0.0469928	ACAGUAU	ENSMUST00000085585.5|Lsm14a|ENSMUSG00000066568.6|LSM14 homolog A (SCD6, S. cerevisiae)
mm10_v2_chr3_-_52104891_52104922	0.045842	ACAGUAU	ENSMUST00000121440.1|Maml3|ENSMUSG00000061143.9|mastermind like 3 (Drosophila)
mm10_v2_chr16_+_11066292_11066381	0.0449929	ACAGUAU	ENSMUST00000089011.4|Snn|ENSMUSG00000037972.6|stannin
mm10_v2_chr13_-_55571118_55571123	0.0448067	ACAGUAU	ENSMUST00000021957.6|Fam193b|ENSMUSG00000021495.8|family with sequence similarity 193, member B
mm10_v2_chr12_-_27342696_27342726	0.0446181	ACAGUAU	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr16_+_4886100_4886150	0.0444973	ACAGUAU	ENSMUST00000070658.8|Mgrn1|ENSMUSG00000022517.10|mahogunin, ring finger 1 	ENSMUST00000023159.8|Mgrn1|ENSMUSG00000022517.10|mahogunin, ring finger 1
mm10_v2_chr4_+_137862237_137862249	0.0442497	ACAGUAU	ENSMUST00000102518.3|Ece1|ENSMUSG00000057530.8|endothelin converting enzyme 1
mm10_v2_chr14_-_78308031_78308050	0.0439615	ACAGUAU	ENSMUST00000022592.7|Tnfsf11|ENSMUSG00000022015.8|tumor necrosis factor (ligand) superfamily, member 11
mm10_v2_chr1_-_106796687_106796728	0.0438107	ACAGUAU	ENSMUST00000094646.5|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr13_-_85288999_85289058	0.0437499	ACAGUAU	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr12_-_118301429_118301458	0.0434181	ACAGUAU	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr7_-_111082997_111083037	0.0432743	ACAGUAU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr3_+_134236483_134236500	0.0432691	ACAGUAU	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr1_+_58393119_58393147	0.0429313	ACAGUAU	ENSMUST00000050552.8|Bzw1|ENSMUSG00000051223.8|basic leucine zipper and W2 domains 1
mm10_v2_chr13_+_80883403_80883422	0.0425713	ACAGUAU	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr1_+_132417409_132417464	0.0423653	ACAGUAU	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr16_+_32608920_32608964	0.0421039	ACAGUAU	ENSMUST00000023486.8|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chr8_+_108714644_108714644	0.0416545	ACAGUAU	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chr16_-_10313940_10313968	0.0414862	ACAGUAU	ENSMUST00000078357.4|Emp2|ENSMUSG00000022505.8|epithelial membrane protein 2
mm10_v2_chr5_+_19907502_19907551	0.041368	ACAGUAU	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr3_+_60501252_60501275	0.0408531	ACAGUAU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr13_-_56895737_56895793	0.0406866	ACAGUAU	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr2_+_59612034_59612109	0.0404877	ACAGUAU	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chr19_+_27217357_27217424	0.0404866	ACAGUAU	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chrX_-_64276937_64277002	0.0404021	ACAGUAU	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr3_+_96635430_96635475	0.0403784	ACAGUAU	ENSMUST00000118557.1|Pex11b|ENSMUSG00000028102.9|peroxisomal biogenesis factor 11 beta
mm10_v2_chr14_+_33923582_33923602	0.0403562	ACAGUAU	ENSMUST00000168727.1|Gdf10|ENSMUSG00000021943.6|growth differentiation factor 10
mm10_v2_chr14_+_54883377_54883507	0.0400671	ACAGUAU	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr15_+_5143861_5143896	0.0394956	ACAGUAU	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr8_+_12395287_12395295	0.0394058	ACAGUAU	ENSMUST00000180353.1|Sox1|ENSMUSG00000096014.1|SRY-box containing gene 1
mm10_v2_chr16_+_8830093_8830104	0.0393671	ACAGUAU	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr10_-_117845935_117845949	0.0389643	ACAGUAU	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr3_+_138742195_138742322	0.0386975	ACAGUAU	ENSMUST00000029800.2|Tspan5|ENSMUSG00000028152.4|tetraspanin 5
mm10_v2_chr16_-_74411292_74411430	0.0384109	ACAGUAU	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr1_-_58586191_58586323	0.0379845	ACAGUAU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr15_+_66577536_66577637	0.037983	ACAGUAU	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chr11_+_53350783_53350833	0.0378603	ACAGUAU	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr1_-_182019927_182019989	0.0378073	ACAGUAU	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chr9_+_68653761_68653786	0.0378014	ACAGUAU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr7_+_110122299_110122350	0.0376135	ACAGUAU	ENSMUST00000033326.8|Wee1|ENSMUSG00000031016.8|WEE 1 homolog 1 (S. pombe)
mm10_v2_chr2_-_64097994_64098023	0.0374283	ACAGUAU	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr13_-_98891036_98891063	0.0373684	ACAGUAU	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr11_-_96777492_96777559	0.0373662	ACAGUAU	ENSMUST00000127375.1|Snx11|ENSMUSG00000020876.8|sorting nexin 11 	ENSMUST00000021246.2|Snx11|ENSMUSG00000020876.8|sorting nexin 11 	ENSMUST00000107661.3|Snx11|ENSMUSG00000020876.8|sorting nexin 11
mm10_v2_chr1_-_78197112_78197134	0.0372019	ACAGUAU	ENSMUST00000087086.6|Pax3|ENSMUSG00000004872.9|paired box gene 3
mm10_v2_chr2_-_132145057_132145118	0.0359869	ACAGUAU	ENSMUST00000028815.8|Slc23a2|ENSMUSG00000027340.9|solute carrier family 23 (nucleobase transporters), member 2
mm10_v2_chr1_-_10232670_10232670	0.035467	ACAGUAU	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr10_+_77606044_77606097	0.0354534	ACAGUAU	ENSMUST00000020501.8|Sumo3|ENSMUSG00000020265.9|SMT3 suppressor of mif two 3 homolog 3 (yeast)
mm10_v2_chr16_-_85173692_85173718	0.0352332	ACAGUAU	ENSMUST00000005406.10|App|ENSMUSG00000022892.10|amyloid beta (A4) precursor protein
mm10_v2_chr12_+_95692212_95692246	0.0351451	ACAGUAU	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr3_-_141982224_141982264	0.0348524	ACAGUAU	ENSMUST00000029948.8|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr3_-_105801323_105801377	0.03452	ACAGUAU	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr1_+_65186727_65186750	0.0343444	ACAGUAU	ENSMUST00000097707.4|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing 	ENSMUST00000081154.7|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing
mm10_v2_chr6_-_21851914_21852183	0.0340868	ACAGUAU	ENSMUST00000134635.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000123116.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000120965.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12
mm10_v2_chr7_-_67372846_67372858	0.0333445	ACAGUAU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chrX_+_138914422_138914438	0.0331602	ACAGUAU	ENSMUST00000064937.7|Nrk|ENSMUSG00000052854.9|Nik related kinase 	ENSMUST00000113052.1|Nrk|ENSMUSG00000052854.9|Nik related kinase
mm10_v2_chr1_+_60746358_60746427	0.0331214	ACAGUAU	ENSMUST00000027165.2|Cd28|ENSMUSG00000026012.2|CD28 antigen
mm10_v2_chr16_+_38089001_38089064	0.0329029	ACAGUAU	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr6_+_52713729_52713800	0.0321949	ACAGUAU	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr9_-_96752822_96752869	0.0321644	ACAGUAU	ENSMUST00000152594.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr2_+_112454997_112455063	0.0313666	ACAGUAU	ENSMUST00000069747.5|Emc7|ENSMUSG00000055943.5|ER membrane protein complex subunit 7
mm10_v2_chr16_-_46496955_46496986	0.0307746	ACAGUAU	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr18_+_36281069_36281151	0.0298733	ACAGUAU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr9_+_13827708_13827781	0.0298045	ACAGUAU	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr1_+_180726019_180726106	0.0296808	ACAGUAU	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr9_-_94538075_94538089	0.0296457	ACAGUAU	ENSMUST00000113028.1|1190002N15Rik|ENSMUSG00000045414.7|RIKEN cDNA 1190002N15 gene
mm10_v2_chr13_+_14063776_14063822	0.029556	ACAGUAU	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr7_+_66839752_66839813	0.029508	ACAGUAU	ENSMUST00000107478.1|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr5_+_139252314_139252329	0.029479	ACAGUAU	ENSMUST00000026976.5|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm10_v2_chr12_+_4917376_4917438	0.0293932	ACAGUAU	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr3_-_101110278_101110294	0.0293476	ACAGUAU	ENSMUST00000102694.3|Ptgfrn|ENSMUSG00000027864.8|prostaglandin F2 receptor negative regulator
mm10_v2_chr13_-_45964964_45965001	0.029268	ACAGUAU	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr11_+_32642826_32642875	0.0290692	ACAGUAU	ENSMUST00000093205.6|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11 	ENSMUST00000076383.7|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11
mm10_v2_chr13_+_9276477_9276620	0.028906	ACAGUAU	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr10_-_95416850_95416861	0.0288937	ACAGUAU	ENSMUST00000020215.9|Socs2|ENSMUSG00000020027.12|suppressor of cytokine signaling 2
mm10_v2_chr5_+_64803513_64803530	0.0288544	ACAGUAU	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr5_+_122284365_122284397	0.0283762	ACAGUAU	ENSMUST00000053426.8|Pptc7|ENSMUSG00000038582.9|PTC7 protein phosphatase homolog (S. cerevisiae)
mm10_v2_chr2_-_104494400_104494463	0.0283227	ACAGUAU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr11_+_95414078_95414243	0.0279744	ACAGUAU	ENSMUST00000107724.2|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000150884.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000107722.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000127713.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein
mm10_v2_chr13_+_48261427_48261427	0.027387	ACAGUAU	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr2_-_26092149_26092177	0.0273238	ACAGUAU	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr13_-_38635036_38635119	0.0269298	ACAGUAU	ENSMUST00000035899.6|Bloc1s5|ENSMUSG00000038982.9|biogenesis of organelles complex-1, subunit 5, muted
mm10_v2_chr15_-_93595877_93595909	0.0267219	ACAGUAU	ENSMUST00000048982.4|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr16_+_33380765_33380787	0.0266395	ACAGUAU	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr2_+_82053222_82053311	0.0265723	ACAGUAU	ENSMUST00000047527.7|Zfp804a|ENSMUSG00000070866.4|zinc finger protein 804A
mm10_v2_chr13_+_37826225_37826315	0.0265248	ACAGUAU	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr6_+_114397936_114398086	0.0263762	ACAGUAU	ENSMUST00000088987.2|Hrh1|ENSMUSG00000053004.8|histamine receptor H1 	ENSMUST00000160212.1|Hrh1|ENSMUSG00000053004.8|histamine receptor H1
mm10_v2_chr6_+_17463749_17463809	0.0263372	ACAGUAU	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr3_-_116424007_116424032	0.026295	ACAGUAU	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr6_-_147264124_147264167	0.0262686	ACAGUAU	ENSMUST00000052296.6|Pthlh|ENSMUSG00000048776.6|parathyroid hormone-like peptide
mm10_v2_chr1_-_166002591_166002609	0.0262401	ACAGUAU	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr6_+_38433913_38433965	0.0261822	ACAGUAU	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr4_+_19605451_19605451	0.0260689	ACAGUAU	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr4_-_53159885_53159900	0.0260351	ACAGUAU	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr4_+_133011506_133011546	0.0258254	ACAGUAU	ENSMUST00000105915.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1 	ENSMUST00000105916.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1
mm10_v2_chr13_-_43480973_43481005	0.0257658	ACAGUAU	ENSMUST00000144326.2|Ranbp9|ENSMUSG00000038546.8|RAN binding protein 9
mm10_v2_chr6_+_112459501_112459604	0.0253351	ACAGUAU	ENSMUST00000075477.6|Cav3|ENSMUSG00000062694.6|caveolin 3
mm10_v2_chr12_+_8674129_8674150	0.0249399	ACAGUAU	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr11_+_57801575_57801649	0.0246141	ACAGUAU	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr9_-_106789130_106789213	0.0244966	ACAGUAU	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr15_-_58823530_58823581	0.0242585	ACAGUAU	ENSMUST00000072113.5|Tmem65|ENSMUSG00000062373.7|transmembrane protein 65
mm10_v2_chrX_+_82948861_82948915	0.0241413	ACAGUAU	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr19_+_41482632_41482688	0.0240433	ACAGUAU	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr11_+_75732869_75732975	0.023992	ACAGUAU	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr14_-_61439831_61439947	0.023853	ACAGUAU	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr14_+_21499770_21499883	0.0233742	ACAGUAU	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr7_-_84151868_84151938	0.0231036	ACAGUAU	ENSMUST00000117085.1|Abhd17c|ENSMUSG00000038459.9|abhydrolase domain containing 17C
mm10_v2_chr17_+_26715644_26715724	0.0230902	ACAGUAU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr15_+_82147238_82147275	0.0229801	ACAGUAU	ENSMUST00000023100.6|Srebf2|ENSMUSG00000022463.7|sterol regulatory element binding factor 2
mm10_v2_chr9_+_59750876_59750918	0.0229325	ACAGUAU	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr10_+_43479140_43479194	0.0227335	ACAGUAU	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr11_-_86357570_86357614	0.0223012	ACAGUAU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr4_+_116877376_116877453	0.021793	ACAGUAU	ENSMUST00000044823.3|Zswim5|ENSMUSG00000033948.3|zinc finger SWIM-type containing 5
mm10_v2_chr5_+_15934685_15934696	0.0216424	ACAGUAU	ENSMUST00000078272.6|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000180204.1|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000167946.2|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000101581.3|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000039370.7|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm10_v2_chr18_+_35829798_35829821	0.0214454	ACAGUAU	ENSMUST00000060722.6|Cxxc5|ENSMUSG00000046668.8|CXXC finger 5
mm10_v2_chr11_-_6475992_6476102	0.0214003	ACAGUAU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr14_+_14012491_14012693	0.0212592	ACAGUAU	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr7_+_123123870_123123901	0.0210798	ACAGUAU	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr12_+_78748947_78748971	0.021053	ACAGUAU	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr19_-_41263931_41264008	0.0209838	ACAGUAU	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chr16_-_45844303_45844381	0.0208268	ACAGUAU	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr4_-_35845204_35845204	0.0206481	ACAGUAU	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr14_-_103099499_103099554	0.0205826	ACAGUAU	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr18_-_46525940_46525999	0.0200284	ACAGUAU	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr5_+_139791513_139791539	0.0197103	ACAGUAU	ENSMUST00000018287.3|Mafk|ENSMUSG00000018143.4|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
mm10_v2_chr4_-_153482768_153482811	0.0195566	ACAGUAU	ENSMUST00000105646.2|Ajap1|ENSMUSG00000039546.9|adherens junction associated protein 1
mm10_v2_chr16_+_70313949_70314016	0.0193858	ACAGUAU	ENSMUST00000163832.1|Gbe1|ENSMUSG00000022707.10|glucan (1,4-alpha-), branching enzyme 1
mm10_v2_chr3_-_104511812_104511933	0.0190269	ACAGUAU	ENSMUST00000046316.6|Lrig2|ENSMUSG00000032913.9|leucine-rich repeats and immunoglobulin-like domains 2
mm10_v2_chr5_-_21055880_21055961	0.0189235	ACAGUAU	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr17_-_10319324_10319380	0.0184008	ACAGUAU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr1_-_82291370_82291416	0.0183066	ACAGUAU	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr3_+_58415689_58415689	0.0173463	ACAGUAU	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr13_-_64274879_64274947	0.0172933	ACAGUAU	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr4_+_62965560_62965617	0.0172891	ACAGUAU	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr2_-_34372004_34372044	0.0165691	ACAGUAU	ENSMUST00000113132.2|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3 	ENSMUST00000040638.8|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3
mm10_v2_chr10_+_98915117_98915172	0.0165076	ACAGUAU	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr3_-_132950043_132950291	0.0162633	ACAGUAU	ENSMUST00000117164.1|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000093971.4|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042729.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042744.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000117811.1|Npnt|ENSMUSG00000040998.12|nephronectin
mm10_v2_chr15_+_68928414_68928421	0.0161554	ACAGUAU	ENSMUST00000022954.6|Khdrbs3|ENSMUSG00000022332.7|KH domain containing, RNA binding, signal transduction associated 3
mm10_v2_chr18_-_24020749_24020813	0.0161415	ACAGUAU	ENSMUST00000066497.5|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr8_+_91070052_91070123	0.0155827	ACAGUAU	ENSMUST00000034091.7|Rbl2|ENSMUSG00000031666.8|retinoblastoma-like 2
mm10_v2_chr4_-_33248500_33248518	0.0155289	ACAGUAU	ENSMUST00000049357.9|Pnrc1|ENSMUSG00000040128.9|proline-rich nuclear receptor coactivator 1
mm10_v2_chrX_-_38564519_38564555	0.0155168	ACAGUAU	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr13_+_55693082_55693151	0.0154351	ACAGUAU	ENSMUST00000057844.8|B230219D22Rik|ENSMUSG00000045767.8|RIKEN cDNA B230219D22 gene
mm10_v2_chr4_-_149307506_149307703	0.0152001	ACAGUAU	ENSMUST00000055647.8|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000030806.5|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000060537.6|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B
mm10_v2_chr2_-_140671462_140671476	0.0150177	ACAGUAU	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr17_-_26508463_26508519	0.0146677	ACAGUAU	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr6_-_48086530_48086658	0.0146418	ACAGUAU	ENSMUST00000073124.6|Zfp746|ENSMUSG00000057691.6|zinc finger protein 746
mm10_v2_chr10_+_127642975_127643034	0.0145894	ACAGUAU	ENSMUST00000092074.5|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6 	ENSMUST00000120279.1|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6
mm10_v2_chr19_+_32757497_32757587	0.0145091	ACAGUAU	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr8_-_102785093_102785114	0.014458	ACAGUAU	ENSMUST00000075190.3|Cdh11|ENSMUSG00000031673.5|cadherin 11
mm10_v2_chr5_+_122209729_122209914	0.0142802	ACAGUAU	ENSMUST00000072602.7|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1 	ENSMUST00000143560.1|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr16_-_17891593_17891700	0.0141758	ACAGUAU	ENSMUST00000117082.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000066127.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000117945.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000012152.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2
mm10_v2_chrX_+_99042581_99042613	0.0141089	ACAGUAU	ENSMUST00000036606.7|Stard8|ENSMUSG00000031216.7|START domain containing 8
mm10_v2_chr2_+_121866918_121866997	0.0135661	ACAGUAU	ENSMUST00000078752.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4 	ENSMUST00000110586.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4
mm10_v2_chr7_+_112023469_112023566	0.0134867	ACAGUAU	ENSMUST00000106653.2|Usp47|ENSMUSG00000059263.7|ubiquitin specific peptidase 47
mm10_v2_chr17_+_29490812_29490839	0.0134291	ACAGUAU	ENSMUST00000024811.6|Pim1|ENSMUSG00000024014.6|proviral integration site 1
mm10_v2_chr13_+_45507438_45507515	0.013401	ACAGUAU	ENSMUST00000000260.6|Gmpr|ENSMUSG00000000253.6|guanosine monophosphate reductase
mm10_v2_chr4_-_99829180_99829191	0.0131826	ACAGUAU	ENSMUST00000146258.1|Itgb3bp|ENSMUSG00000028549.11|integrin beta 3 binding protein (beta3-endonexin)
mm10_v2_chr16_-_92826004_92826080	0.0129749	ACAGUAU	ENSMUST00000023673.7|Runx1|ENSMUSG00000022952.10|runt related transcription factor 1
mm10_v2_chr1_+_60409612_60409648	0.0128092	ACAGUAU	ENSMUST00000052332.8|Abi2|ENSMUSG00000026782.9|abl-interactor 2
mm10_v2_chr16_+_18248866_18248919	0.0126989	ACAGUAU	ENSMUST00000115640.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A 	ENSMUST00000140206.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A
mm10_v2_chr2_+_103566304_103566323	0.0123393	ACAGUAU	ENSMUST00000076212.3|Abtb2|ENSMUSG00000032724.5|ankyrin repeat and BTB (POZ) domain containing 2
mm10_v2_chr1_-_23922283_23922366	0.0114231	ACAGUAU	ENSMUST00000027339.7|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr3_-_108146080_108146150	0.011189	ACAGUAU	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr5_+_103425181_103425197	0.0111185	ACAGUAU	ENSMUST00000048957.9|Ptpn13|ENSMUSG00000034573.10|protein tyrosine phosphatase, non-receptor type 13
mm10_v2_chr19_+_26605106_26605119	0.0110642	ACAGUAU	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr8_+_26158186_26158252	0.0107727	ACAGUAU	ENSMUST00000036807.5|Thap1|ENSMUSG00000037214.5|THAP domain containing, apoptosis associated protein 1 	ENSMUST00000130231.1|Thap1|ENSMUSG00000037214.5|THAP domain containing, apoptosis associated protein 1
mm10_v2_chr9_+_114731177_114731234	0.0106747	ACAGUAU	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr12_+_64965742_64965775	0.0101174	ACAGUAU	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr1_+_127774164_127774238	0.0100897	ACAGUAU	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr17_+_30005029_30005098	0.00988865	ACAGUAU	ENSMUST00000057897.7|Zfand3|ENSMUSG00000044477.10|zinc finger, AN1-type domain 3
mm10_v2_chr7_-_98656530_98656600	0.00975239	ACAGUAU	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr3_+_83026147_83026162	0.00944833	ACAGUAU	ENSMUST00000166581.1|Fga|ENSMUSG00000028001.10|fibrinogen alpha chain 	ENSMUST00000029630.9|Fga|ENSMUSG00000028001.10|fibrinogen alpha chain
mm10_v2_chrX_+_18162575_18162657	0.00920051	ACAGUAU	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr2_+_154436437_154436535	0.00906772	ACAGUAU	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr13_-_45002045_45002117	0.00897391	ACAGUAU	ENSMUST00000072329.7|Dtnbp1|ENSMUSG00000057531.7|dystrobrevin binding protein 1 	ENSMUST00000110128.4|Dtnbp1|ENSMUSG00000057531.7|dystrobrevin binding protein 1
mm10_v2_chr16_-_16146771_16146851	0.00855714	ACAGUAU	ENSMUST00000040248.7|Spidr|ENSMUSG00000041974.9|scaffolding protein involved i DNA repair
mm10_v2_chr13_+_84222286_84222356	0.00854548	ACAGUAU	ENSMUST00000057495.8|Tmem161b|ENSMUSG00000035762.10|transmembrane protein 161B
mm10_v2_chr12_+_111538101_111538243	0.00839369	ACAGUAU	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr14_-_18239053_18239127	0.00837409	ACAGUAU	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr6_+_83914353_83914411	0.00823794	ACAGUAU	ENSMUST00000113835.3|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like 	ENSMUST00000032088.7|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like 	ENSMUST00000113836.3|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like
mm10_v2_chrX_-_12762069_12762080	0.00814877	ACAGUAU	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr12_+_119945957_119946133	0.00808387	ACAGUAU	ENSMUST00000058644.8|Tmem196|ENSMUSG00000048004.8|transmembrane protein 196
mm10_v2_chr9_-_52168111_52168111	0.00779934	ACAGUAU	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr7_-_121707253_121707460	0.00774152	ACAGUAU	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr6_-_126645784_126645801	0.0075358	ACAGUAU	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr15_+_100038635_100038669	0.00746149	ACAGUAU	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr1_-_63114516_63114667	0.00737915	ACAGUAU	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr13_-_107890059_107890073	0.00735128	ACAGUAU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr3_-_97227364_97227421	0.00720734	ACAGUAU	ENSMUST00000046521.7|Bcl9|ENSMUSG00000038256.9|B cell CLL/lymphoma 9
mm10_v2_chr15_-_28025834_28025879	0.00707235	ACAGUAU	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr17_+_6106880_6106907	0.00696436	ACAGUAU	ENSMUST00000149756.1|Tulp4|ENSMUSG00000034377.4|tubby like protein 4
mm10_v2_chr2_+_69722797_69722840	0.00663997	ACAGUAU	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr19_+_56722372_56722372	0.00663059	ACAGUAU	ENSMUST00000038949.4|Adrb1|ENSMUSG00000035283.4|adrenergic receptor, beta 1
mm10_v2_chr17_+_13760502_13760674	0.00658727	ACAGUAU	ENSMUST00000139347.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000156591.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000170827.2|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000139666.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137784.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137708.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000150848.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
mm10_v2_chr10_+_95940663_95940703	0.00620831	ACAGUAU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr9_-_56161051_56161075	0.00609904	ACAGUAU	ENSMUST00000034876.8|Tspan3|ENSMUSG00000032324.10|tetraspanin 3
mm10_v2_chr10_+_80179482_80179531	0.0058711	ACAGUAU	ENSMUST00000003154.6|Efna2|ENSMUSG00000003070.6|ephrin A2
mm10_v2_chr7_+_82335732_82335732	0.00586094	ACAGUAU	ENSMUST00000173287.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr4_+_47353222_47353265	0.00571779	ACAGUAU	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr5_-_66173051_66173117	0.00560667	ACAGUAU	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr10_+_39732099_39732140	0.00544939	ACAGUAU	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr7_+_87602544_87602544	0.00502916	ACAGUAU	ENSMUST00000167164.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000107263.2|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chr7_-_144553657_144553757	0.0048185	ACAGUAU	ENSMUST00000168134.3|Ppfia1|ENSMUSG00000037519.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm10_v2_chr12_+_16894894_16894978	0.00477312	ACAGUAU	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr2_-_102400863_102400970	0.00455082	ACAGUAU	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chrX_+_99975570_99975781	0.00447579	ACAGUAU	ENSMUST00000113779.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113776.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113775.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113780.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113778.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113781.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113783.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000071453.2|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113777.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A
mm10_v2_chr5_-_73256555_73256636	0.00418867	ACAGUAU	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr2_+_156840077_156840141	0.00392775	ACAGUAU	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr12_-_75596195_75596261	0.00385048	ACAGUAU	ENSMUST00000021447.7|Ppp2r5e|ENSMUSG00000021051.9|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm10_v2_chr10_-_111010001_111010066	0.00366063	ACAGUAU	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr8_-_8660773_8660773	0.00329876	ACAGUAU	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr2_-_60125651_60125775	0.003249	ACAGUAU	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr4_-_82859571_82859679	0.00276666	ACAGUAU	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr2_+_117121374_117121374	0.002758	ACAGUAU	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr15_-_13173607_13173644	0.00231459	ACAGUAU	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chr5_+_108268897_108268924	0.0022403	ACAGUAU	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr4_-_154636831_154636873	0.00216456	ACAGUAU	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr11_-_95309557_95309602	0.00216076	ACAGUAU	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chrX_+_9199865_9199907	0.00211122	ACAGUAU	ENSMUST00000069763.2|Lancl3|ENSMUSG00000047344.9|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm10_v2_chr6_+_21949571_21949683	0.00197979	ACAGUAU	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr19_-_37207293_37207508	0.00195561	ACAGUAU	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr2_-_9878580_9878607	0.00163009	ACAGUAU	ENSMUST00000102976.3|Gata3|ENSMUSG00000015619.10|GATA binding protein 3
mm10_v2_chr1_-_136346074_136346145	0.00153864	ACAGUAU	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr19_-_17837620_17837642	0.00109219	ACAGUAU	ENSMUST00000025618.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5 	ENSMUST00000050715.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5
mm10_v2_chr7_+_100706702_100706731	0.00104265	ACAGUAU	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr13_+_92844750_92844790	0.00102486	ACAGUAU	ENSMUST00000076169.3|Mtx3|ENSMUSG00000021704.7|metaxin 3
mm10_v2_chr8_+_94386438_94386468	0.00071435	ACAGUAU	ENSMUST00000161576.1|Herpud1|ENSMUSG00000031770.9|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm10_v2_chr14_+_73552665_73552776	0.00061526	ACAGUAU	ENSMUST00000160507.1|Sucla2|ENSMUSG00000022110.7|succinate-Coenzyme A ligase, ADP-forming, beta subunit 	ENSMUST00000022706.6|Sucla2|ENSMUSG00000022110.7|succinate-Coenzyme A ligase, ADP-forming, beta subunit
mm10_v2_chr16_-_50432340_50432409	0.000614209	ACAGUAU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr13_+_49341549_49341623	0.000532216	ACAGUAU	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr10_-_91123955_91124059	0.000490251	ACAGUAU	ENSMUST00000164505.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000170810.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000076694.6|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm10_v2_chr3_-_133544390_133544412	0.00042371	ACAGUAU	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr3_+_16183177_16183206	0.000347356	ACAGUAU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr16_-_13668122_13668181	0.000153621	ACAGUAU	ENSMUST00000058884.8|Parn|ENSMUSG00000022685.8|poly(A)-specific ribonuclease (deadenylation nuclease)
mm10_v2_chr1_-_184999549_184999549	0.00012105	ACAGUAU	ENSMUST00000027929.4|Mark1|ENSMUSG00000026620.6|MAP/microtubule affinity-regulating kinase 1
mm10_v2_chr15_+_59648350_59648369	4.21944e-05	ACAGUAU	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
