mm10_v2_chr10_+_4611971_4612021	7.2321	AGCUGCC	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr7_+_109010825_109010930	3.88321	AGCUGCC	ENSMUST00000033341.5|Tub|ENSMUSG00000031028.7|tubby candidate gene
mm10_v2_chr17_-_12868126_12868148	3.02518	AGCUGCC	ENSMUST00000089015.3|Mas1|ENSMUSG00000068037.4|MAS1 oncogene
mm10_v2_chr16_-_4523056_4523075	2.82267	AGCUGCC	ENSMUST00000090500.3|Srl|ENSMUSG00000022519.7|sarcalumenin 	ENSMUST00000023161.7|Srl|ENSMUSG00000022519.7|sarcalumenin
mm10_v2_chr2_+_22895482_22895522	1.91059	AGCUGCC	ENSMUST00000053729.7|Pdss1|ENSMUSG00000026784.8|prenyl (solanesyl) diphosphate synthase, subunit 1
mm10_v2_chr9_-_45936049_45936106	1.62105	AGCUGCC	ENSMUST00000034590.2|Tagln|ENSMUSG00000032085.4|transgelin
mm10_v2_chr2_+_38931975_38932007	1.57233	AGCUGCC	ENSMUST00000057279.5|Olfml2a|ENSMUSG00000046618.7|olfactomedin-like 2A
mm10_v2_chr10_-_87493651_87493666	1.52871	AGCUGCC	ENSMUST00000020243.7|Ascl1|ENSMUSG00000020052.7|achaete-scute complex homolog 1 (Drosophila)
mm10_v2_chr10_-_59951753_59951775	1.48492	AGCUGCC	ENSMUST00000020308.3|Ddit4|ENSMUSG00000020108.3|DNA-damage-inducible transcript 4
mm10_v2_chr10_+_40883819_40883862	1.45522	AGCUGCC	ENSMUST00000105509.1|Wasf1|ENSMUSG00000019831.8|WAS protein family, member 1
mm10_v2_chr4_+_11156411_11156453	1.37853	AGCUGCC	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr11_+_51619731_51619813	1.28538	AGCUGCC	ENSMUST00000127405.1|Nhp2|ENSMUSG00000001056.3|NHP2 ribonucleoprotein
mm10_v2_chr3_+_129532386_129532440	1.27941	AGCUGCC	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr6_+_120666388_120666424	1.24067	AGCUGCC	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr5_-_96161990_96162097	1.21562	AGCUGCC	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr6_-_72439549_72439564	1.16992	AGCUGCC	ENSMUST00000059472.8|Mat2a|ENSMUSG00000053907.9|methionine adenosyltransferase II, alpha
mm10_v2_chr9_+_107587711_107587746	1.14111	AGCUGCC	ENSMUST00000010192.5|Ifrd2|ENSMUSG00000010048.5|interferon-related developmental regulator 2
mm10_v2_chr16_-_11203259_11203331	1.1406	AGCUGCC	ENSMUST00000119953.1|Rsl1d1|ENSMUSG00000005846.11|ribosomal L1 domain containing 1
mm10_v2_chr8_+_105348163_105348258	1.09116	AGCUGCC	ENSMUST00000073149.5|Slc9a5|ENSMUSG00000014786.7|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm10_v2_chr2_-_28916412_28916440	1.08307	AGCUGCC	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr14_+_45351473_45351473	1.07926	AGCUGCC	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr4_+_140700487_140700541	1.05433	AGCUGCC	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr16_+_21891969_21891969	1.05393	AGCUGCC	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr11_+_98907801_98907824	1.03233	AGCUGCC	ENSMUST00000092706.6|Cdc6|ENSMUSG00000017499.9|cell division cycle 6
mm10_v2_chr15_+_83779999_83780033	1.02955	AGCUGCC	ENSMUST00000046168.5|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr5_-_140649018_140649052	0.94981	AGCUGCC	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr3_-_145649970_145649992	0.933135	AGCUGCC	ENSMUST00000029846.3|Cyr61|ENSMUSG00000028195.3|cysteine rich protein 61
mm10_v2_chr9_+_108692116_108692193	0.932906	AGCUGCC	ENSMUST00000035220.6|Prkar2a|ENSMUSG00000032601.8|protein kinase, cAMP dependent regulatory, type II alpha
mm10_v2_chr18_+_32377176_32377289	0.824058	AGCUGCC	ENSMUST00000091967.5|Bin1|ENSMUSG00000024381.9|bridging integrator 1 	ENSMUST00000025239.7|Bin1|ENSMUSG00000024381.9|bridging integrator 1
mm10_v2_chr4_-_32923455_32923530	0.803691	AGCUGCC	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr2_-_152951456_152951540	0.786008	AGCUGCC	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr4_+_48663502_48663525	0.770756	AGCUGCC	ENSMUST00000030033.4|Murc|ENSMUSG00000028348.7|muscle-related coiled-coil protein
mm10_v2_chr3_+_90341654_90341654	0.768914	AGCUGCC	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr15_-_64060439_64060478	0.760604	AGCUGCC	ENSMUST00000063838.4|Fam49b|ENSMUSG00000022378.7|family with sequence similarity 49, member B
mm10_v2_chr9_-_48835932_48835962	0.759706	AGCUGCC	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr2_-_73214409_73214447	0.754443	AGCUGCC	ENSMUST00000028517.6|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr16_-_4719148_4719164	0.750034	AGCUGCC	ENSMUST00000115851.3|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1
mm10_v2_chr2_+_5845017_5845062	0.713733	AGCUGCC	ENSMUST00000026927.3|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENSMUST00000179748.1|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm10_v2_chr2_-_163918683_163918683	0.69427	AGCUGCC	ENSMUST00000044734.2|Rims4|ENSMUSG00000035226.5|regulating synaptic membrane exocytosis 4
mm10_v2_chr12_+_102948843_102948874	0.691128	AGCUGCC	ENSMUST00000101099.5|Unc79|ENSMUSG00000021198.10|unc-79 homolog (C. elegans)
mm10_v2_chr3_+_88532314_88532396	0.684561	AGCUGCC	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chr7_+_63444741_63444762	0.681081	AGCUGCC	ENSMUST00000058476.7|Otud7a|ENSMUSG00000033510.8|OTU domain containing 7A
mm10_v2_chr10_+_25359798_25359844	0.679231	AGCUGCC	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr13_+_44731265_44731276	0.672155	AGCUGCC	ENSMUST00000173246.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr18_+_61045139_61045206	0.664243	AGCUGCC	ENSMUST00000025522.4|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide 	ENSMUST00000115274.1|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide
mm10_v2_chr13_+_49608030_49608071	0.66119	AGCUGCC	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr10_-_61383523_61383523	0.65466	AGCUGCC	ENSMUST00000020289.8|Pald1|ENSMUSG00000020092.8|phosphatase domain containing, paladin 1
mm10_v2_chr8_-_121652895_121652913	0.64564	AGCUGCC	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr18_-_75697639_75697697	0.638298	AGCUGCC	ENSMUST00000165559.1|Ctif|ENSMUSG00000052928.8|CBP80/20-dependent translation initiation factor
mm10_v2_chr19_-_41848076_41848132	0.624602	AGCUGCC	ENSMUST00000059231.2|Frat2|ENSMUSG00000047604.2|frequently rearranged in advanced T cell lymphomas 2
mm10_v2_chr10_+_13552894_13552894	0.619932	AGCUGCC	ENSMUST00000019944.8|Adat2|ENSMUSG00000019808.8|adenosine deaminase, tRNA-specific 2
mm10_v2_chr4_-_136835843_136835988	0.59483	AGCUGCC	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr10_-_128645965_128645991	0.58451	AGCUGCC	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr7_-_105640308_105640416	0.568954	AGCUGCC	ENSMUST00000133519.1|Arfip2|ENSMUSG00000030881.8|ADP-ribosylation factor interacting protein 2 	ENSMUST00000084782.2|Arfip2|ENSMUSG00000030881.8|ADP-ribosylation factor interacting protein 2 	ENSMUST00000131446.1|Arfip2|ENSMUSG00000030881.8|ADP-ribosylation factor interacting protein 2
mm10_v2_chr12_+_76444560_76444560	0.566645	AGCUGCC	ENSMUST00000101281.2|Gm10451|ENSMUSG00000073000.2|predicted gene 10451
mm10_v2_chr6_-_134792596_134792682	0.555626	AGCUGCC	ENSMUST00000100857.3|Dusp16|ENSMUSG00000030203.11|dual specificity phosphatase 16
mm10_v2_chr11_-_97744659_97744774	0.538366	AGCUGCC	ENSMUST00000018691.8|Pip4k2b|ENSMUSG00000018547.8|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm10_v2_chr4_-_108579330_108579352	0.536588	AGCUGCC	ENSMUST00000079213.5|Prpf38a|ENSMUSG00000063800.5|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm10_v2_chr4_-_108780782_108780803	0.528504	AGCUGCC	ENSMUST00000106657.1|Zfyve9|ENSMUSG00000034557.8|zinc finger, FYVE domain containing 9
mm10_v2_chr3_+_99141068_99141103	0.524657	AGCUGCC	ENSMUST00000004343.2|Wars2|ENSMUSG00000004233.8|tryptophanyl tRNA synthetase 2 (mitochondrial)
mm10_v2_chr2_-_122611238_122611303	0.508591	AGCUGCC	ENSMUST00000028624.8|Gatm|ENSMUSG00000027199.8|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
mm10_v2_chr7_+_45783686_45783801	0.506696	AGCUGCC	ENSMUST00000118564.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000133428.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr15_-_53902472_53902530	0.498984	AGCUGCC	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr10_-_62880014_62880014	0.489597	AGCUGCC	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr13_+_106947104_106947164	0.48552	AGCUGCC	ENSMUST00000022203.8|Dimt1|ENSMUSG00000021692.8|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
mm10_v2_chr10_-_128589650_128589673	0.47117	AGCUGCC	ENSMUST00000082059.6|Erbb3|ENSMUSG00000018166.8|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
mm10_v2_chr2_+_90745370_90745469	0.467826	AGCUGCC	ENSMUST00000013759.5|Fnbp4|ENSMUSG00000008200.8|formin binding protein 4
mm10_v2_chr11_-_69413675_69413675	0.467795	AGCUGCC	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr7_+_44310213_44310253	0.466149	AGCUGCC	ENSMUST00000107938.1|Shank1|ENSMUSG00000038738.9|SH3/ankyrin domain gene 1
mm10_v2_chr11_-_116027961_116027978	0.465826	AGCUGCC	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr5_+_64160207_64160220	0.463576	AGCUGCC	ENSMUST00000101195.2|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr4_-_129189512_129189594	0.460529	AGCUGCC	ENSMUST00000117965.1|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000106061.2|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000072431.6|S100pbp|ENSMUSG00000040928.9|S100P binding protein
mm10_v2_chr17_-_74323896_74323954	0.455121	AGCUGCC	ENSMUST00000164832.1|Dpy30|ENSMUSG00000024067.7|dpy-30 homolog (C. elegans)
mm10_v2_chr13_-_3918157_3918220	0.449176	AGCUGCC	ENSMUST00000091853.4|Net1|ENSMUSG00000021215.8|neuroepithelial cell transforming gene 1
mm10_v2_chrX_-_73824938_73824977	0.446407	AGCUGCC	ENSMUST00000114438.2|Pdzd4|ENSMUSG00000002006.6|PDZ domain containing 4 	ENSMUST00000002080.5|Pdzd4|ENSMUSG00000002006.6|PDZ domain containing 4
mm10_v2_chr7_-_133123312_133123377	0.441237	AGCUGCC	ENSMUST00000171022.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000163601.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000165534.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000124096.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000033269.8|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr11_-_49712674_49712726	0.438927	AGCUGCC	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr2_+_36230426_36230491	0.432811	AGCUGCC	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr3_-_110142996_110143010	0.416972	AGCUGCC	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr4_+_13743424_13743478	0.414993	AGCUGCC	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr14_+_69029289_69029414	0.412041	AGCUGCC	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr2_-_66124994_66125143	0.410509	AGCUGCC	ENSMUST00000028378.3|Galnt3|ENSMUSG00000026994.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm10_v2_chr12_-_98577940_98578046	0.401604	AGCUGCC	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr1_+_64532790_64532815	0.39389	AGCUGCC	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr10_+_128377086_128377155	0.391834	AGCUGCC	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr1_-_190170671_190170744	0.391629	AGCUGCC	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr11_+_98836775_98836831	0.386681	AGCUGCC	ENSMUST00000107479.2|Rapgefl1|ENSMUSG00000038020.5|Rap guanine nucleotide exchange factor (GEF)-like 1
mm10_v2_chr11_-_62539257_62539264	0.385771	AGCUGCC	ENSMUST00000018653.1|Cenpv|ENSMUSG00000018509.2|centromere protein V
mm10_v2_chr12_+_111039334_111039400	0.38454	AGCUGCC	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr1_-_173367638_173367695	0.382716	AGCUGCC	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr1_-_162740350_162740533	0.378185	AGCUGCC	ENSMUST00000182331.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000183011.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182593.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182149.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C
mm10_v2_chr10_-_61452658_61452813	0.371602	AGCUGCC	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr9_-_86880414_86880467	0.361744	AGCUGCC	ENSMUST00000074501.5|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000098495.3|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000074468.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000036347.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr8_+_105605220_105605306	0.34985	AGCUGCC	ENSMUST00000043531.8|Fam65a|ENSMUSG00000038604.8|family with sequence similarity 65, member A
mm10_v2_chr17_+_55445550_55445701	0.347454	AGCUGCC	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr15_-_102516806_102517064	0.346579	AGCUGCC	ENSMUST00000169162.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000023812.2|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000165174.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169367.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169377.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr5_+_143622440_143622459	0.343077	AGCUGCC	ENSMUST00000116456.3|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr5_-_145140238_145140281	0.341505	AGCUGCC	ENSMUST00000031627.8|Pdap1|ENSMUSG00000029623.8|PDGFA associated protein 1
mm10_v2_chr5_+_137350371_137350513	0.33459	AGCUGCC	ENSMUST00000166239.1|Ephb4|ENSMUSG00000029710.9|Eph receptor B4 	ENSMUST00000111054.1|Ephb4|ENSMUSG00000029710.9|Eph receptor B4
mm10_v2_chr2_-_94010807_94010823	0.327538	AGCUGCC	ENSMUST00000111240.1|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli)
mm10_v2_chr6_-_86669136_86669164	0.325402	AGCUGCC	ENSMUST00000001184.7|Mxd1|ENSMUSG00000001156.7|MAX dimerization protein 1
mm10_v2_chr1_-_152090308_152090332	0.325246	AGCUGCC	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr18_-_39490649_39490717	0.320925	AGCUGCC	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr14_-_74947865_74947883	0.313357	AGCUGCC	ENSMUST00000088970.5|Lrch1|ENSMUSG00000068015.6|leucine-rich repeats and calponin homology (CH) domain containing 1
mm10_v2_chr5_+_108065742_108065767	0.306347	AGCUGCC	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chrX_-_103821940_103821992	0.302535	AGCUGCC	ENSMUST00000042664.5|Slc16a2|ENSMUSG00000033965.6|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm10_v2_chr12_+_83632208_83632325	0.299073	AGCUGCC	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr2_+_112379204_112379253	0.291901	AGCUGCC	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr11_-_94242701_94242729	0.290748	AGCUGCC	ENSMUST00000061469.3|Wfikkn2|ENSMUSG00000044177.4|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm10_v2_chr2_+_75659253_75659318	0.289515	AGCUGCC	ENSMUST00000111964.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111962.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111961.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000164947.2|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000090792.4|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3
mm10_v2_chr9_+_57708534_57708608	0.288614	AGCUGCC	ENSMUST00000043990.7|Edc3|ENSMUSG00000038957.7|enhancer of mRNA decapping 3 homolog (S. cerevisiae) 	ENSMUST00000142807.1|Edc3|ENSMUSG00000038957.7|enhancer of mRNA decapping 3 homolog (S. cerevisiae)
mm10_v2_chr2_-_102186322_102186394	0.285643	AGCUGCC	ENSMUST00000111222.1|Ldlrad3|ENSMUSG00000048058.11|low density lipoprotein receptor class A domain containing 3 	ENSMUST00000058790.5|Ldlrad3|ENSMUSG00000048058.11|low density lipoprotein receptor class A domain containing 3
mm10_v2_chr7_+_110018301_110018425	0.282555	AGCUGCC	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr8_-_47352348_47352367	0.28169	AGCUGCC	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr8_-_94601720_94601739	0.277942	AGCUGCC	ENSMUST00000034226.6|Fam192a|ENSMUSG00000031774.7|family with sequence similarity 192, member A
mm10_v2_chr13_-_113618549_113618565	0.269169	AGCUGCC	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr11_-_78512105_78512172	0.264199	AGCUGCC	ENSMUST00000052566.7|Tmem199|ENSMUSG00000051232.7|transmembrane protein 199
mm10_v2_chr1_+_191098414_191098414	0.260983	AGCUGCC	ENSMUST00000027943.4|Batf3|ENSMUSG00000026630.4|basic leucine zipper transcription factor, ATF-like 3
mm10_v2_chr14_-_54409469_54409477	0.258799	AGCUGCC	ENSMUST00000000984.4|Slc7a7|ENSMUSG00000000958.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm10_v2_chr11_-_119228461_119228504	0.251055	AGCUGCC	ENSMUST00000036113.3|Tbc1d16|ENSMUSG00000039976.3|TBC1 domain family, member 16
mm10_v2_chr15_-_37007382_37007402	0.240928	AGCUGCC	ENSMUST00000078976.7|Zfp706|ENSMUSG00000062397.7|zinc finger protein 706
mm10_v2_chr9_-_65827544_65827576	0.237389	AGCUGCC	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr2_+_145903234_145903300	0.237032	AGCUGCC	ENSMUST00000110000.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000002805.7|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000169732.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000134759.2|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit
mm10_v2_chr4_+_135120640_135120660	0.231984	AGCUGCC	ENSMUST00000056977.7|Runx3|ENSMUSG00000070691.4|runt related transcription factor 3
mm10_v2_chr2_+_155775333_155775392	0.227217	AGCUGCC	ENSMUST00000029141.5|Mmp24|ENSMUSG00000027612.7|matrix metallopeptidase 24
mm10_v2_chr14_+_55884960_55885010	0.222871	AGCUGCC	ENSMUST00000022831.3|Khnyn|ENSMUSG00000047153.3|KH and NYN domain containing
mm10_v2_chr11_-_100620165_100620209	0.207241	AGCUGCC	ENSMUST00000014339.8|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr2_-_155930018_155930066	0.201635	AGCUGCC	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr8_+_27085520_27085598	0.201627	AGCUGCC	ENSMUST00000178514.1|Gpr124|ENSMUSG00000031486.8|G protein-coupled receptor 124 	ENSMUST00000033876.7|Gpr124|ENSMUSG00000031486.8|G protein-coupled receptor 124
mm10_v2_chrX_-_151096510_151096543	0.197166	AGCUGCC	ENSMUST00000112683.2|Tsr2|ENSMUSG00000025264.6|TSR2 20S rRNA accumulation 	ENSMUST00000026295.3|Tsr2|ENSMUSG00000025264.6|TSR2 20S rRNA accumulation
mm10_v2_chr1_+_133246092_133246099	0.196135	AGCUGCC	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr5_+_65537209_65537233	0.189798	AGCUGCC	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr1_+_131744011_131744029	0.188849	AGCUGCC	ENSMUST00000049027.3|Slc26a9|ENSMUSG00000042268.4|solute carrier family 26, member 9
mm10_v2_chr4_+_42949814_42949923	0.188493	AGCUGCC	ENSMUST00000037872.3|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENSMUST00000098112.2|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5
mm10_v2_chr4_+_59189240_59189257	0.179959	AGCUGCC	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr5_-_66618772_66618828	0.178401	AGCUGCC	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr6_+_122874526_122874573	0.176468	AGCUGCC	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr19_+_57452900_57452926	0.173105	AGCUGCC	ENSMUST00000026073.6|Trub1|ENSMUSG00000025086.6|TruB pseudouridine (psi) synthase homolog 1 (E. coli) 	ENSMUST00000026072.3|Trub1|ENSMUSG00000025086.6|TruB pseudouridine (psi) synthase homolog 1 (E. coli)
mm10_v2_chr16_+_37776873_37776873	0.172858	AGCUGCC	ENSMUST00000114763.2|Fstl1|ENSMUSG00000022816.5|follistatin-like 1
mm10_v2_chr12_-_105685235_105685310	0.166082	AGCUGCC	ENSMUST00000041055.7|Atg2b|ENSMUSG00000041341.9|autophagy related 2B
mm10_v2_chr13_+_93308006_93308034	0.163207	AGCUGCC	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr6_-_37299950_37299981	0.154323	AGCUGCC	ENSMUST00000101532.3|Dgki|ENSMUSG00000038665.9|diacylglycerol kinase, iota
mm10_v2_chr6_-_99266494_99266540	0.148502	AGCUGCC	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr18_+_40258361_40258361	0.14823	AGCUGCC	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr13_+_5861489_5861501	0.147713	AGCUGCC	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr5_-_74068361_74068438	0.140692	AGCUGCC	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr1_-_193130201_193130257	0.138007	AGCUGCC	ENSMUST00000085555.1|Diexf|ENSMUSG00000016181.4|digestive organ expansion factor homolog (zebrafish)
mm10_v2_chr19_+_5447692_5447711	0.137672	AGCUGCC	ENSMUST00000025850.5|Fosl1|ENSMUSG00000024912.5|fos-like antigen 1
mm10_v2_chr6_-_57535422_57535447	0.135625	AGCUGCC	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr11_+_100415697_100415720	0.133212	AGCUGCC	ENSMUST00000001595.3|Fkbp10|ENSMUSG00000001555.4|FK506 binding protein 10
mm10_v2_chr5_+_145283343_145283343	0.132748	AGCUGCC	ENSMUST00000094116.3|Zscan25|ENSMUSG00000070420.3|zinc finger and SCAN domain containing 25
mm10_v2_chr16_+_42907563_42907684	0.129961	AGCUGCC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr16_-_17911303_17911354	0.128529	AGCUGCC	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr4_-_82505749_82505802	0.12689	AGCUGCC	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr7_+_127485221_127485221	0.126551	AGCUGCC	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr1_-_172082757_172082795	0.120748	AGCUGCC	ENSMUST00000003550.4|Ncstn|ENSMUSG00000003458.6|nicastrin
mm10_v2_chr16_-_4880284_4880315	0.119133	AGCUGCC	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr9_+_90162978_90163037	0.114073	AGCUGCC	ENSMUST00000113060.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm10_v2_chr13_-_111490111_111490139	0.113784	AGCUGCC	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chr18_+_61105844_61105890	0.112663	AGCUGCC	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chrX_-_150589844_150589861	0.112655	AGCUGCC	ENSMUST00000112725.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112720.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr11_+_115933282_115933282	0.111447	AGCUGCC	ENSMUST00000140991.1|Sap30bp|ENSMUSG00000020755.3|SAP30 binding protein
mm10_v2_chr15_-_36794498_36794547	0.104145	AGCUGCC	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr2_-_68472138_68472268	0.103359	AGCUGCC	ENSMUST00000102715.3|Stk39|ENSMUSG00000027030.9|serine/threonine kinase 39
mm10_v2_chr1_-_64121456_64121491	0.102384	AGCUGCC	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr2_-_33887862_33887946	0.093968	AGCUGCC	ENSMUST00000041555.3|Mvb12b|ENSMUSG00000038740.3|multivesicular body subunit 12B
mm10_v2_chr11_+_83409655_83409718	0.0935056	AGCUGCC	ENSMUST00000175848.1|Rasl10b|ENSMUSG00000020684.8|RAS-like, family 10, member B 	ENSMUST00000108140.3|Rasl10b|ENSMUSG00000020684.8|RAS-like, family 10, member B
mm10_v2_chr2_+_52857844_52857868	0.0911055	AGCUGCC	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chr17_-_46556158_46556188	0.0890483	AGCUGCC	ENSMUST00000015749.5|Srf|ENSMUSG00000015605.5|serum response factor
mm10_v2_chr7_+_87602544_87602544	0.0885351	AGCUGCC	ENSMUST00000167164.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000107263.2|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chrX_-_108834303_108834381	0.0862886	AGCUGCC	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr19_+_36834215_36834297	0.0803393	AGCUGCC	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr19_-_46969474_46969555	0.0791032	AGCUGCC	ENSMUST00000086961.7|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr4_+_59805829_59805914	0.077882	AGCUGCC	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr2_+_167932327_167932379	0.0733851	AGCUGCC	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr11_+_83964419_83964478	0.0732934	AGCUGCC	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chr11_-_116306696_116306750	0.0718589	AGCUGCC	ENSMUST00000133468.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106411.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106413.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000021147.7|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr2_+_140395309_140395438	0.0701542	AGCUGCC	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr1_+_127204986_127205051	0.0693039	AGCUGCC	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
mm10_v2_chr6_+_129408854_129408876	0.0681605	AGCUGCC	ENSMUST00000058352.8|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a 	ENSMUST00000164513.2|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a 	ENSMUST00000088075.5|Clec9a|ENSMUSG00000046080.11|C-type lectin domain family 9, member a
mm10_v2_chr18_-_43438280_43438297	0.0603952	AGCUGCC	ENSMUST00000121805.1|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr17_+_29614786_29614797	0.0581519	AGCUGCC	ENSMUST00000024817.7|Rnf8|ENSMUSG00000090083.4|ring finger protein 8
mm10_v2_chr1_+_93990509_93990509	0.0562908	AGCUGCC	ENSMUST00000097632.3|Gm6086|ENSMUSG00000073608.3|predicted gene 6086
mm10_v2_chr16_-_8792302_8792326	0.05565	AGCUGCC	ENSMUST00000160405.1|Usp7|ENSMUSG00000022710.11|ubiquitin specific peptidase 7
mm10_v2_chr11_-_43901187_43901242	0.0555738	AGCUGCC	ENSMUST00000067258.2|Adra1b|ENSMUSG00000050541.8|adrenergic receptor, alpha 1b 	ENSMUST00000139906.1|Adra1b|ENSMUSG00000050541.8|adrenergic receptor, alpha 1b
mm10_v2_chr2_-_116065798_116065853	0.0536025	AGCUGCC	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr7_+_92875253_92875284	0.0493713	AGCUGCC	ENSMUST00000076052.6|Prcp|ENSMUSG00000061119.6|prolylcarboxypeptidase (angiotensinase C)
mm10_v2_chrX_+_36112110_36112172	0.0466785	AGCUGCC	ENSMUST00000033418.7|Il13ra1|ENSMUSG00000017057.9|interleukin 13 receptor, alpha 1
mm10_v2_chr5_+_114774677_114774677	0.046496	AGCUGCC	ENSMUST00000102578.4|Ankrd13a|ENSMUSG00000041870.10|ankyrin repeat domain 13a
mm10_v2_chr1_-_131097535_131097576	0.044533	AGCUGCC	ENSMUST00000016672.4|Mapkapk2|ENSMUSG00000016528.4|MAP kinase-activated protein kinase 2
mm10_v2_chr3_-_133544390_133544412	0.0413731	AGCUGCC	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr18_+_31804057_31804120	0.0327666	AGCUGCC	ENSMUST00000025264.6|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33 	ENSMUST00000082319.7|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33
mm10_v2_chr11_-_95309557_95309602	0.0298833	AGCUGCC	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr4_+_8691303_8691380	0.0271359	AGCUGCC	ENSMUST00000051558.3|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr4_+_47353222_47353265	0.0255073	AGCUGCC	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr17_-_56609689_56609771	0.0238884	AGCUGCC	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr11_-_70687917_70687981	0.0230146	AGCUGCC	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr15_-_39943689_39943788	0.0220043	AGCUGCC	ENSMUST00000022916.5|Lrp12|ENSMUSG00000022305.6|low density lipoprotein-related protein 12
mm10_v2_chr16_-_23988852_23988852	0.0213628	AGCUGCC	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr15_+_102406143_102406380	0.0138268	AGCUGCC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr12_-_4477138_4477196	0.0131895	AGCUGCC	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chr19_-_5875268_5875279	0.0128504	AGCUGCC	ENSMUST00000025728.6|Frmd8|ENSMUSG00000024816.6|FERM domain containing 8
mm10_v2_chr10_+_95515116_95515162	0.0114329	AGCUGCC	ENSMUST00000099329.3|Ube2n|ENSMUSG00000074781.4|ubiquitin-conjugating enzyme E2N
mm10_v2_chr7_+_59228743_59228769	0.00972809	AGCUGCC	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr12_+_83763628_83763648	0.00801437	AGCUGCC	ENSMUST00000121733.1|Papln|ENSMUSG00000021223.7|papilin, proteoglycan-like sulfated glycoprotein
mm10_v2_chr2_+_32570858_32570913	0.00572743	AGCUGCC	ENSMUST00000140592.1|Dpm2|ENSMUSG00000026810.6|dolichol-phosphate (beta-D) mannosyltransferase 2 	ENSMUST00000028151.6|Dpm2|ENSMUSG00000026810.6|dolichol-phosphate (beta-D) mannosyltransferase 2
mm10_v2_chr11_+_101448403_101448487	0.00391254	AGCUGCC	ENSMUST00000010502.6|Ifi35|ENSMUSG00000010358.7|interferon-induced protein 35
mm10_v2_chr17_+_28691342_28691399	0.00167256	AGCUGCC	ENSMUST00000114758.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000004990.6|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000062694.8|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000114754.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr4_+_137468767_137468831	0.00130859	AGCUGCC	ENSMUST00000030547.8|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2) 	ENSMUST00000171332.1|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2)
mm10_v2_chr13_+_24801657_24801657	7.63007e-05	AGCUGCC	ENSMUST00000019276.4|BC005537|ENSMUSG00000019132.4|cDNA sequence BC005537
