mm10_v2_chr11_-_96005872_96005952	0.481937	AGGUAGU	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chr10_-_45470201_45470260	0.39808	AGGUAGU	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr6_-_145048809_145048821	0.337837	AGGUAGU	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr11_+_94936224_94936260	0.301726	AGGUAGU	ENSMUST00000001547.7|Col1a1|ENSMUSG00000001506.10|collagen, type I, alpha 1
mm10_v2_chr9_+_111311674_111311758	0.292462	AGGUAGU	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr6_-_49214954_49215022	0.288442	AGGUAGU	ENSMUST00000031838.7|Igf2bp3|ENSMUSG00000029814.8|insulin-like growth factor 2 mRNA binding protein 3
mm10_v2_chr6_+_4505493_4505493	0.28729	AGGUAGU	ENSMUST00000031668.8|Col1a2|ENSMUSG00000029661.10|collagen, type I, alpha 2
mm10_v2_chr9_+_72806874_72806874	0.281147	AGGUAGU	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr1_+_45311538_45311638	0.239916	AGGUAGU	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr8_+_117157972_117158137	0.193987	AGGUAGU	ENSMUST00000064488.4|Gan|ENSMUSG00000052557.5|giant axonal neuropathy 	ENSMUST00000162997.1|Gan|ENSMUSG00000052557.5|giant axonal neuropathy
mm10_v2_chr7_+_16130285_16130333	0.166839	AGGUAGU	ENSMUST00000168693.1|Slc8a2|ENSMUSG00000030376.7|solute carrier family 8 (sodium/calcium exchanger), member 2
mm10_v2_chr1_+_86303221_86303239	0.162591	AGGUAGU	ENSMUST00000113306.2|B3gnt7|ENSMUSG00000079445.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm10_v2_chr10_-_120476469_120476527	0.158778	AGGUAGU	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr4_-_134018829_134018841	0.154999	AGGUAGU	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr17_-_68004075_68004140	0.142321	AGGUAGU	ENSMUST00000024840.5|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr6_+_4747306_4747372	0.141443	AGGUAGU	ENSMUST00000175823.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000176204.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000166678.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr17_+_27556613_27556635	0.108706	AGGUAGU	ENSMUST00000117600.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000114888.3|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chrX_-_104201126_104201185	0.105344	AGGUAGU	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chrX_+_93654863_93654981	0.105291	AGGUAGU	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr4_+_140700487_140700541	0.105055	AGGUAGU	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr7_+_44442398_44442485	0.0998781	AGGUAGU	ENSMUST00000058667.8|Lrrc4b|ENSMUSG00000047085.8|leucine rich repeat containing 4B
mm10_v2_chr12_-_27342696_27342726	0.0984355	AGGUAGU	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr3_+_145292472_145292536	0.095111	AGGUAGU	ENSMUST00000029848.4|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1 	ENSMUST00000139001.1|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1
mm10_v2_chrX_+_36328353_36328418	0.0931824	AGGUAGU	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr8_-_84104773_84104793	0.0901632	AGGUAGU	ENSMUST00000041367.7|Dcaf15|ENSMUSG00000037103.7|DDB1 and CUL4 associated factor 15
mm10_v2_chr2_+_152081529_152081624	0.0896081	AGGUAGU	ENSMUST00000064061.3|Scrt2|ENSMUSG00000060257.2|scratch homolog 2, zinc finger protein (Drosophila)
mm10_v2_chr7_+_120842824_120842836	0.088771	AGGUAGU	ENSMUST00000047875.8|Eef2k|ENSMUSG00000035064.10|eukaryotic elongation factor-2 kinase
mm10_v2_chrX_-_111697069_111697127	0.0859582	AGGUAGU	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr3_+_68468162_68468209	0.0842848	AGGUAGU	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr15_+_8109313_8109356	0.0819668	AGGUAGU	ENSMUST00000163765.1|Nup155|ENSMUSG00000022142.7|nucleoporin 155
mm10_v2_chr9_-_103364970_103364996	0.0816325	AGGUAGU	ENSMUST00000116517.2|Cdv3|ENSMUSG00000032803.8|carnitine deficiency-associated gene expressed in ventricle 3
mm10_v2_chr13_+_96924674_96924694	0.0796648	AGGUAGU	ENSMUST00000171324.1|Gcnt4|ENSMUSG00000091387.1|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm10_v2_chr15_+_55307743_55307762	0.0720112	AGGUAGU	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr15_+_102990576_102990622	0.0643426	AGGUAGU	ENSMUST00000001703.6|Hoxc8|ENSMUSG00000001657.6|homeobox C8
mm10_v2_chr11_+_96286623_96286653	0.0584686	AGGUAGU	ENSMUST00000049352.7|Hoxb7|ENSMUSG00000038721.8|homeobox B7
mm10_v2_chr16_-_46010212_46010223	0.0578099	AGGUAGU	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr2_+_112379204_112379253	0.0565873	AGGUAGU	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr6_-_52217505_52217550	0.0556588	AGGUAGU	ENSMUST00000048715.6|Hoxa7|ENSMUSG00000038236.6|homeobox A7
mm10_v2_chr10_-_123196916_123196961	0.0547267	AGGUAGU	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr9_+_52047150_52047163	0.0495119	AGGUAGU	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr15_+_11064764_11064797	0.0480412	AGGUAGU	ENSMUST00000061318.7|Adamts12|ENSMUSG00000047497.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm10_v2_chr1_-_168431695_168431750	0.0473221	AGGUAGU	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr11_+_57801575_57801649	0.0468767	AGGUAGU	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr8_-_47352348_47352367	0.0456311	AGGUAGU	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr11_+_44617310_44617336	0.0454579	AGGUAGU	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr11_-_76846968_76847045	0.0430488	AGGUAGU	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr9_-_50617428_50617467	0.0426887	AGGUAGU	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr3_-_92083132_92083147	0.0426375	AGGUAGU	ENSMUST00000058150.6|Lor|ENSMUSG00000043165.6|loricrin
mm10_v2_chrX_+_110814390_110814413	0.0426148	AGGUAGU	ENSMUST00000078229.3|Pou3f4|ENSMUSG00000056854.3|POU domain, class 3, transcription factor 4
mm10_v2_chr15_+_6708372_6708396	0.0425539	AGGUAGU	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr15_-_6874969_6874969	0.0421695	AGGUAGU	ENSMUST00000022746.6|Osmr|ENSMUSG00000022146.6|oncostatin M receptor 	ENSMUST00000176826.1|Osmr|ENSMUSG00000022146.6|oncostatin M receptor
mm10_v2_chr16_+_87698904_87698959	0.0408782	AGGUAGU	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr8_+_23669653_23669671	0.040795	AGGUAGU	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr3_-_10440054_10440127	0.039041	AGGUAGU	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr15_+_89253035_89253035	0.0387284	AGGUAGU	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chr2_+_156196642_156196775	0.0383194	AGGUAGU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr2_+_60209887_60210073	0.0369467	AGGUAGU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr5_-_135545108_135545128	0.0362552	AGGUAGU	ENSMUST00000060311.8|Hip1|ENSMUSG00000039959.9|huntingtin interacting protein 1
mm10_v2_chr10_+_127677064_127677099	0.0361864	AGGUAGU	ENSMUST00000118612.1|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194 	ENSMUST00000048099.4|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194
mm10_v2_chr1_+_132007606_132007634	0.0358539	AGGUAGU	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chrX_-_48454152_48454193	0.0349305	AGGUAGU	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr19_+_30030439_30030528	0.0315571	AGGUAGU	ENSMUST00000025739.7|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chrX_+_138914422_138914438	0.0294813	AGGUAGU	ENSMUST00000064937.7|Nrk|ENSMUSG00000052854.9|Nik related kinase 	ENSMUST00000113052.1|Nrk|ENSMUSG00000052854.9|Nik related kinase
mm10_v2_chr6_+_134920401_134920434	0.0291304	AGGUAGU	ENSMUST00000067327.4|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B 	ENSMUST00000003115.6|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B
mm10_v2_chr6_+_14901344_14901364	0.0287058	AGGUAGU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr2_+_31245801_31245900	0.0281797	AGGUAGU	ENSMUST00000000199.7|Ncs1|ENSMUSG00000062661.6|neuronal calcium sensor 1
mm10_v2_chr3_+_103058302_103058352	0.028009	AGGUAGU	ENSMUST00000029445.6|Nras|ENSMUSG00000027852.8|neuroblastoma ras oncogene
mm10_v2_chr12_-_34528844_34528904	0.027929	AGGUAGU	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr11_+_54303798_54303844	0.0277978	AGGUAGU	ENSMUST00000093106.5|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6
mm10_v2_chr17_-_34603675_34603702	0.0271246	AGGUAGU	ENSMUST00000015622.7|Rnf5|ENSMUSG00000015478.7|ring finger protein 5
mm10_v2_chr10_-_43540945_43541024	0.0264769	AGGUAGU	ENSMUST00000147196.1|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene 	ENSMUST00000019932.3|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene
mm10_v2_chr2_+_28641227_28641262	0.0257657	AGGUAGU	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr4_+_28813125_28813136	0.0256884	AGGUAGU	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr2_+_36136384_36136428	0.0243467	AGGUAGU	ENSMUST00000028250.2|Mrrf|ENSMUSG00000026887.3|mitochondrial ribosome recycling factor
mm10_v2_chr9_-_117252450_117252489	0.0235115	AGGUAGU	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr13_+_35659856_35659870	0.0232698	AGGUAGU	ENSMUST00000075220.6|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr2_-_93334467_93334515	0.0217684	AGGUAGU	ENSMUST00000111265.2|Tspan18|ENSMUSG00000027217.7|tetraspanin 18
mm10_v2_chr14_-_33447142_33447179	0.0208833	AGGUAGU	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr1_+_59764264_59764286	0.0193796	AGGUAGU	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr18_-_10181792_10181792	0.0188026	AGGUAGU	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr15_-_76538728_76538773	0.0187153	AGGUAGU	ENSMUST00000023219.7|Fbxl6|ENSMUSG00000022559.7|F-box and leucine-rich repeat protein 6
mm10_v2_chr9_+_110132015_110132102	0.0182011	AGGUAGU	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr16_-_5132458_5132483	0.0162219	AGGUAGU	ENSMUST00000035672.3|Ppl|ENSMUSG00000039457.3|periplakin
mm10_v2_chr9_+_65101453_65101535	0.0149393	AGGUAGU	ENSMUST00000077696.6|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000035499.4|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000166273.1|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4
mm10_v2_chr8_+_14095849_14095915	0.0141953	AGGUAGU	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr11_+_96365752_96365752	0.0137685	AGGUAGU	ENSMUST00000019117.2|Hoxb1|ENSMUSG00000018973.2|homeobox B1
mm10_v2_chr7_-_141434532_141434605	0.0137369	AGGUAGU	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr8_-_91313223_91313279	0.0130811	AGGUAGU	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr8_-_110997764_110997839	0.012711	AGGUAGU	ENSMUST00000040416.7|Ddx19a|ENSMUSG00000015023.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
mm10_v2_chr4_+_6365650_6365720	0.0126865	AGGUAGU	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr6_+_70956456_70956606	0.0113105	AGGUAGU	ENSMUST00000163089.1|Foxi3|ENSMUSG00000055874.6|forkhead box I3 	ENSMUST00000069634.5|Foxi3|ENSMUSG00000055874.6|forkhead box I3
mm10_v2_chr1_+_121431049_121431124	0.0111516	AGGUAGU	ENSMUST00000036025.9|Ccdc93|ENSMUSG00000026339.12|coiled-coil domain containing 93 	ENSMUST00000112621.1|Ccdc93|ENSMUSG00000026339.12|coiled-coil domain containing 93
mm10_v2_chr2_+_122738495_122738600	0.0104249	AGGUAGU	ENSMUST00000005954.8|Bloc1s6|ENSMUSG00000005804.8|biogenesis of organelles complex-1, subunit 6, pallidin
mm10_v2_chr2_-_152398046_152398076	0.00983216	AGGUAGU	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr10_-_121476248_121476275	0.0095107	AGGUAGU	ENSMUST00000026902.7|Rassf3|ENSMUSG00000025795.7|Ras association (RalGDS/AF-6) domain family member 3
mm10_v2_chr14_-_105176860_105176918	0.00948117	AGGUAGU	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr10_-_61383523_61383523	0.00880655	AGGUAGU	ENSMUST00000020289.8|Pald1|ENSMUSG00000020092.8|phosphatase domain containing, paladin 1
mm10_v2_chr11_+_96292453_96292508	0.0087314	AGGUAGU	ENSMUST00000173432.1|Hoxb6|ENSMUSG00000000690.4|homeobox B6
mm10_v2_chr5_+_13399309_13399382	0.00815434	AGGUAGU	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chrX_-_7188713_7188743	0.00736634	AGGUAGU	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr11_-_106216318_106216363	0.00704408	AGGUAGU	ENSMUST00000002043.3|Ccdc47|ENSMUSG00000078622.2|coiled-coil domain containing 47
mm10_v2_chr1_-_134955908_134955955	0.00675165	AGGUAGU	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr6_-_52204415_52204587	0.00485128	AGGUAGU	ENSMUST00000048794.6|Hoxa5|ENSMUSG00000038253.6|homeobox A5
mm10_v2_chrX_-_133688978_133689005	0.00478468	AGGUAGU	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr2_+_154436437_154436535	0.00459975	AGGUAGU	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr10_+_95940663_95940703	0.00274048	AGGUAGU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr18_-_61726302_61726336	0.00241366	AGGUAGU	ENSMUST00000062991.7|Grpel2|ENSMUSG00000024580.7|GrpE-like 2, mitochondrial
mm10_v2_chr10_-_23349887_23349919	0.00184029	AGGUAGU	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chrX_-_162159717_162159732	0.00142065	AGGUAGU	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chr17_+_33929514_33929586	0.00057345	AGGUAGU	ENSMUST00000047503.9|Rgl2|ENSMUSG00000041354.9|ral guanine nucleotide dissociation stimulator-like 2
mm10_v2_chr14_-_124677089_124677127	0.000498764	AGGUAGU	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
