mm10_v2_chr12_-_27342696_27342726	0.507804	AUUGCAC	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr14_+_68083853_68083870	0.487764	AUUGCAC	ENSMUST00000022639.7|Nefl|ENSMUSG00000022055.7|neurofilament, light polypeptide
mm10_v2_chr7_+_109010825_109010930	0.452581	AUUGCAC	ENSMUST00000033341.5|Tub|ENSMUSG00000031028.7|tubby candidate gene
mm10_v2_chr12_-_108003594_108003613	0.390768	AUUGCAC	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr3_+_102010138_102010171	0.363166	AUUGCAC	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr5_-_108549934_108550024	0.360783	AUUGCAC	ENSMUST00000129040.1|Cplx1|ENSMUSG00000033615.9|complexin 1 	ENSMUST00000046892.9|Cplx1|ENSMUSG00000033615.9|complexin 1
mm10_v2_chr12_+_117843489_117843515	0.357008	AUUGCAC	ENSMUST00000021592.9|Cdca7l|ENSMUSG00000021175.9|cell division cycle associated 7 like
mm10_v2_chr14_+_45351473_45351473	0.278562	AUUGCAC	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr19_+_28835074_28835116	0.276617	AUUGCAC	ENSMUST00000025875.4|Slc1a1|ENSMUSG00000024935.4|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm10_v2_chr2_-_12301914_12301922	0.276272	AUUGCAC	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr8_+_117157972_117158137	0.269355	AUUGCAC	ENSMUST00000064488.4|Gan|ENSMUSG00000052557.5|giant axonal neuropathy 	ENSMUST00000162997.1|Gan|ENSMUSG00000052557.5|giant axonal neuropathy
mm10_v2_chr4_+_63215402_63215435	0.258446	AUUGCAC	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr11_+_46055973_46056068	0.247729	AUUGCAC	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr8_+_14095849_14095915	0.244059	AUUGCAC	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr6_-_91807424_91807456	0.239378	AUUGCAC	ENSMUST00000162300.1|Grip2|ENSMUSG00000030098.9|glutamate receptor interacting protein 2
mm10_v2_chr10_+_28074813_28074873	0.234584	AUUGCAC	ENSMUST00000166468.1|Ptprk|ENSMUSG00000019889.9|protein tyrosine phosphatase, receptor type, K
mm10_v2_chr6_+_21215472_21215503	0.231544	AUUGCAC	ENSMUST00000081542.5|Kcnd2|ENSMUSG00000060882.5|potassium voltage-gated channel, Shal-related family, member 2
mm10_v2_chr3_+_107101551_107101567	0.223891	AUUGCAC	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr5_+_107497718_107497759	0.217659	AUUGCAC	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr5_+_76840597_76840637	0.216237	AUUGCAC	ENSMUST00000120639.2|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000163347.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene 	ENSMUST00000121851.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr6_+_137252297_137252326	0.214846	AUUGCAC	ENSMUST00000077115.6|Ptpro|ENSMUSG00000030223.8|protein tyrosine phosphatase, receptor type, O 	ENSMUST00000167679.1|Ptpro|ENSMUSG00000030223.8|protein tyrosine phosphatase, receptor type, O
mm10_v2_chr3_+_90341654_90341654	0.209686	AUUGCAC	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr13_-_114458720_114458736	0.208011	AUUGCAC	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chrX_-_72656135_72656199	0.20597	AUUGCAC	ENSMUST00000055966.6|Gabra3|ENSMUSG00000031343.7|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm10_v2_chr16_-_42340595_42340651	0.203562	AUUGCAC	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr15_-_78718113_78718113	0.200177	AUUGCAC	ENSMUST00000088592.4|Elfn2|ENSMUSG00000043460.6|leucine rich repeat and fibronectin type III, extracellular 2
mm10_v2_chr8_-_31918203_31918368	0.193707	AUUGCAC	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr9_-_106656081_106656109	0.184322	AUUGCAC	ENSMUST00000023959.7|Grm2|ENSMUSG00000023192.7|glutamate receptor, metabotropic 2
mm10_v2_chr5_-_20882072_20882124	0.176008	AUUGCAC	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr12_-_5375682_5375705	0.173091	AUUGCAC	ENSMUST00000020958.8|Klhl29|ENSMUSG00000020627.9|kelch-like 29
mm10_v2_chr9_-_70141484_70141578	0.170938	AUUGCAC	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr1_+_134709293_134709318	0.167416	AUUGCAC	ENSMUST00000121990.1|Syt2|ENSMUSG00000026452.9|synaptotagmin II
mm10_v2_chr10_-_128891674_128891718	0.164991	AUUGCAC	ENSMUST00000026408.6|Gdf11|ENSMUSG00000025352.6|growth differentiation factor 11
mm10_v2_chr4_-_106464167_106464329	0.1585	AUUGCAC	ENSMUST00000049507.5|Pcsk9|ENSMUSG00000044254.6|proprotein convertase subtilisin/kexin type 9
mm10_v2_chr18_+_10325148_10325222	0.157921	AUUGCAC	ENSMUST00000048977.8|Greb1l|ENSMUSG00000042942.9|growth regulation by estrogen in breast cancer-like
mm10_v2_chr1_-_54926311_54926402	0.155894	AUUGCAC	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr4_-_105109829_105109913	0.154763	AUUGCAC	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr6_+_34709442_34709497	0.149107	AUUGCAC	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_-_100472725_100472759	0.141435	AUUGCAC	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr2_+_55437100_55437182	0.140721	AUUGCAC	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr18_-_46198810_46198824	0.135894	AUUGCAC	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr11_-_75422586_75422701	0.135862	AUUGCAC	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr13_-_110280103_110280213	0.135544	AUUGCAC	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr11_+_120232921_120232952	0.130522	AUUGCAC	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr7_+_126272589_126272619	0.127982	AUUGCAC	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr13_-_99516537_99516602	0.126559	AUUGCAC	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr13_-_95891905_95891929	0.123779	AUUGCAC	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr13_-_58113592_58113620	0.123485	AUUGCAC	ENSMUST00000160860.1|Klhl3|ENSMUSG00000014164.8|kelch-like 3
mm10_v2_chr15_-_12592556_12592556	0.121181	AUUGCAC	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr15_-_79687776_79687894	0.120139	AUUGCAC	ENSMUST00000023061.5|Josd1|ENSMUSG00000022426.5|Josephin domain containing 1
mm10_v2_chr7_+_51621830_51621891	0.117546	AUUGCAC	ENSMUST00000032710.5|Slc17a6|ENSMUSG00000030500.5|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm10_v2_chr17_-_25433775_25433790	0.11709	AUUGCAC	ENSMUST00000159610.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000159048.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000078496.5|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr15_+_80287234_80287252	0.117007	AUUGCAC	ENSMUST00000160424.1|Cacna1i|ENSMUSG00000022416.9|calcium channel, voltage-dependent, alpha 1I subunit
mm10_v2_chr16_-_78576649_78576666	0.115175	AUUGCAC	ENSMUST00000114220.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114219.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114218.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed
mm10_v2_chr14_-_121797670_121797753	0.113615	AUUGCAC	ENSMUST00000100299.3|Dock9|ENSMUSG00000025558.9|dedicator of cytokinesis 9
mm10_v2_chr4_-_46566432_46566471	0.110861	AUUGCAC	ENSMUST00000030021.7|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A 	ENSMUST00000107757.1|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A
mm10_v2_chr1_-_143776973_143777068	0.110028	AUUGCAC	ENSMUST00000159879.1|Trove2|ENSMUSG00000018199.8|TROVE domain family, member 2
mm10_v2_chr7_-_141429351_141429429	0.109672	AUUGCAC	ENSMUST00000164387.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000137488.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000084436.3|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr6_-_24956106_24956131	0.108752	AUUGCAC	ENSMUST00000127247.2|Tmem229a|ENSMUSG00000048022.10|transmembrane protein 229A
mm10_v2_chrX_+_36328353_36328418	0.108209	AUUGCAC	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr11_-_55607733_55607822	0.107379	AUUGCAC	ENSMUST00000108853.1|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit 	ENSMUST00000075603.4|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit
mm10_v2_chr5_+_130448801_130448830	0.105805	AUUGCAC	ENSMUST00000111288.2|Caln1|ENSMUSG00000060371.6|calneuron 1
mm10_v2_chr7_+_87246649_87246661	0.105732	AUUGCAC	ENSMUST00000068829.5|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4 	ENSMUST00000032781.7|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4
mm10_v2_chr14_-_8172986_8173003	0.10428	AUUGCAC	ENSMUST00000022268.8|Pdhb|ENSMUSG00000021748.8|pyruvate dehydrogenase (lipoamide) beta
mm10_v2_chr14_-_67933512_67933585	0.104166	AUUGCAC	ENSMUST00000039135.4|Dock5|ENSMUSG00000044447.4|dedicator of cytokinesis 5
mm10_v2_chr18_+_69345721_69345811	0.103539	AUUGCAC	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr14_+_116925291_116925362	0.102796	AUUGCAC	ENSMUST00000078849.4|Gpc6|ENSMUSG00000058571.4|glypican 6
mm10_v2_chr4_+_17853451_17853474	0.102567	AUUGCAC	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr18_-_58209926_58210067	0.102465	AUUGCAC	ENSMUST00000025497.6|Fbn2|ENSMUSG00000024598.8|fibrillin 2
mm10_v2_chr16_+_11066292_11066381	0.102367	AUUGCAC	ENSMUST00000089011.4|Snn|ENSMUSG00000037972.6|stannin
mm10_v2_chr5_-_100500592_100500657	0.101899	AUUGCAC	ENSMUST00000149714.1|Lin54|ENSMUSG00000035310.9|lin-54 homolog (C. elegans) 	ENSMUST00000046154.5|Lin54|ENSMUSG00000035310.9|lin-54 homolog (C. elegans)
mm10_v2_chr5_-_124249758_124249782	0.100915	AUUGCAC	ENSMUST00000162812.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr11_-_4947991_4948064	0.100066	AUUGCAC	ENSMUST00000093369.4|Nefh|ENSMUSG00000020396.8|neurofilament, heavy polypeptide
mm10_v2_chr19_+_23687385_23687408	0.0987329	AUUGCAC	ENSMUST00000099560.3|Ptar1|ENSMUSG00000074925.3|protein prenyltransferase alpha subunit repeat containing 1
mm10_v2_chr8_+_109868586_109868611	0.097574	AUUGCAC	ENSMUST00000179721.1|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2 	ENSMUST00000034175.4|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2
mm10_v2_chrX_-_105929397_105929408	0.0971803	AUUGCAC	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr10_-_120476469_120476527	0.0960545	AUUGCAC	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr15_-_56694525_56694554	0.0937008	AUUGCAC	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr15_-_51991679_51991760	0.0929551	AUUGCAC	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chr4_-_126429501_126429556	0.0926183	AUUGCAC	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr5_-_23783700_23783711	0.092461	AUUGCAC	ENSMUST00000119946.1|Pus7|ENSMUSG00000057541.8|pseudouridylate synthase 7 homolog (S. cerevisiae)
mm10_v2_chr5_+_108065742_108065767	0.0914864	AUUGCAC	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr17_+_26414820_26414965	0.0900257	AUUGCAC	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr17_+_7925990_7926006	0.0896993	AUUGCAC	ENSMUST00000036370.7|Tagap|ENSMUSG00000033450.7|T cell activation Rho GTPase activating protein
mm10_v2_chr6_+_56714891_56714951	0.0896566	AUUGCAC	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr6_-_47594967_47595047	0.0895664	AUUGCAC	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chrX_+_93654863_93654981	0.0894819	AUUGCAC	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr3_+_51415986_51416044	0.0892158	AUUGCAC	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr8_+_69902178_69902194	0.0889302	AUUGCAC	ENSMUST00000050373.5|Tssk6|ENSMUSG00000047654.5|testis-specific serine kinase 6
mm10_v2_chr5_-_38159457_38159491	0.0873318	AUUGCAC	ENSMUST00000031009.4|Nsg1|ENSMUSG00000029126.4|neuron specific gene family member 1
mm10_v2_chr5_+_3343893_3343945	0.0870953	AUUGCAC	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr2_-_45113255_45113279	0.0869889	AUUGCAC	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr11_-_116412965_116413004	0.086956	AUUGCAC	ENSMUST00000100202.3|Rnf157|ENSMUSG00000052949.8|ring finger protein 157 	ENSMUST00000106398.2|Rnf157|ENSMUSG00000052949.8|ring finger protein 157
mm10_v2_chr7_+_130577334_130577484	0.0864915	AUUGCAC	ENSMUST00000059145.7|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2 	ENSMUST00000084513.4|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr2_+_28641227_28641262	0.0858105	AUUGCAC	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr3_+_95929246_95929298	0.085363	AUUGCAC	ENSMUST00000165307.1|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENSMUST00000015893.6|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm10_v2_chr7_+_110627650_110627669	0.0849076	AUUGCAC	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr13_-_28953690_28953713	0.0843072	AUUGCAC	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr15_+_92051153_92051170	0.0839021	AUUGCAC	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr10_-_22820126_22820150	0.0824916	AUUGCAC	ENSMUST00000049930.7|Tcf21|ENSMUSG00000045680.7|transcription factor 21
mm10_v2_chr1_-_124045523_124045571	0.0814749	AUUGCAC	ENSMUST00000112606.1|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr3_+_122245557_122245578	0.0801897	AUUGCAC	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr4_+_136469755_136469850	0.0795656	AUUGCAC	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr15_-_73184840_73184971	0.0781318	AUUGCAC	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr4_+_11191726_11191789	0.0774272	AUUGCAC	ENSMUST00000029866.9|Ccne2|ENSMUSG00000028212.10|cyclin E2 	ENSMUST00000108324.3|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr13_+_94057757_94057838	0.0773919	AUUGCAC	ENSMUST00000054274.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr9_+_48985358_48985451	0.0758046	AUUGCAC	ENSMUST00000047349.6|Usp28|ENSMUSG00000032267.7|ubiquitin specific peptidase 28
mm10_v2_chr13_+_44731265_44731276	0.0751821	AUUGCAC	ENSMUST00000173246.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr17_+_71781947_71781947	0.0750753	AUUGCAC	ENSMUST00000024854.7|Clip4|ENSMUSG00000024059.9|CAP-GLY domain containing linker protein family, member 4
mm10_v2_chr3_+_22076644_22076681	0.0740736	AUUGCAC	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr2_-_104816696_104816792	0.0737206	AUUGCAC	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr1_-_78197112_78197134	0.0726604	AUUGCAC	ENSMUST00000087086.6|Pax3|ENSMUSG00000004872.9|paired box gene 3
mm10_v2_chr14_+_45219993_45219993	0.0716034	AUUGCAC	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr2_+_25054355_25054391	0.0714733	AUUGCAC	ENSMUST00000100334.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000152122.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000116574.3|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000006646.8|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chrX_-_152368680_152368740	0.0689728	AUUGCAC	ENSMUST00000070316.5|Gpr173|ENSMUSG00000056679.7|G-protein coupled receptor 173
mm10_v2_chr10_+_52233612_52233672	0.0688284	AUUGCAC	ENSMUST00000069004.5|Dcbld1|ENSMUSG00000019891.7|discoidin, CUB  and LCCL domain containing 1 	ENSMUST00000105476.2|Dcbld1|ENSMUSG00000019891.7|discoidin, CUB  and LCCL domain containing 1
mm10_v2_chr7_+_112679314_112679325	0.068494	AUUGCAC	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr13_-_95375329_95375369	0.0676943	AUUGCAC	ENSMUST00000022189.8|Aggf1|ENSMUSG00000021681.8|angiogenic factor with G patch and FHA domains 1
mm10_v2_chr9_+_96196246_96196280	0.0674853	AUUGCAC	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr1_+_132007606_132007634	0.067452	AUUGCAC	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr12_+_4133047_4133126	0.0669397	AUUGCAC	ENSMUST00000124505.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3
mm10_v2_chr9_+_75071148_75071228	0.0667238	AUUGCAC	ENSMUST00000123128.1|Myo5a|ENSMUSG00000034593.10|myosin VA
mm10_v2_chr2_-_125859139_125859221	0.0659532	AUUGCAC	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr8_+_105860634_105860661	0.0657586	AUUGCAC	ENSMUST00000008594.7|Nutf2|ENSMUSG00000008450.7|nuclear transport factor 2
mm10_v2_chr5_+_128601106_128601106	0.0657573	AUUGCAC	ENSMUST00000117102.2|Fzd10|ENSMUSG00000081683.4|frizzled homolog 10 (Drosophila)
mm10_v2_chr6_+_14901344_14901364	0.0652012	AUUGCAC	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr11_+_20543307_20543336	0.0651262	AUUGCAC	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr8_-_71486037_71486067	0.0642308	AUUGCAC	ENSMUST00000093450.4|Ano8|ENSMUSG00000034863.7|anoctamin 8
mm10_v2_chr6_+_36388055_36388084	0.0638828	AUUGCAC	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr12_+_29528382_29528468	0.0623577	AUUGCAC	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr10_-_128645965_128645991	0.0616677	AUUGCAC	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr17_+_55445550_55445701	0.0612548	AUUGCAC	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr5_-_114773488_114773517	0.0608082	AUUGCAC	ENSMUST00000178440.1|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000043283.7|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000112185.2|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2
mm10_v2_chr11_+_43528759_43528796	0.0606452	AUUGCAC	ENSMUST00000050574.6|Ccnjl|ENSMUSG00000044707.7|cyclin J-like
mm10_v2_chr12_+_102948843_102948874	0.0600262	AUUGCAC	ENSMUST00000101099.5|Unc79|ENSMUSG00000021198.10|unc-79 homolog (C. elegans)
mm10_v2_chr9_+_108991902_108991969	0.0598281	AUUGCAC	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr1_+_187997821_187997834	0.0596401	AUUGCAC	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_+_143640664_143640751	0.0591461	AUUGCAC	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr6_-_116193426_116193501	0.0583394	AUUGCAC	ENSMUST00000088896.3|Tmcc1|ENSMUSG00000030126.11|transmembrane and coiled coil domains 1
mm10_v2_chr4_+_149518216_149518277	0.0580718	AUUGCAC	ENSMUST00000030839.6|Ctnnbip1|ENSMUSG00000028988.7|catenin beta interacting protein 1
mm10_v2_chr12_+_81631369_81631394	0.0577982	AUUGCAC	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr1_-_21079162_21079243	0.0575104	AUUGCAC	ENSMUST00000037998.4|Tram2|ENSMUSG00000041779.4|translocating chain-associating membrane protein 2
mm10_v2_chr2_+_90745370_90745469	0.0568447	AUUGCAC	ENSMUST00000013759.5|Fnbp4|ENSMUSG00000008200.8|formin binding protein 4
mm10_v2_chrX_+_20059535_20059574	0.0562941	AUUGCAC	ENSMUST00000044138.7|Chst7|ENSMUSG00000037347.7|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm10_v2_chr9_-_108190352_108190420	0.0562892	AUUGCAC	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr9_-_83806241_83806260	0.0561035	AUUGCAC	ENSMUST00000034796.7|Elovl4|ENSMUSG00000032262.7|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
mm10_v2_chr12_-_14152038_14152069	0.0558825	AUUGCAC	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr12_-_54862783_54862921	0.055303	AUUGCAC	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr16_-_67620880_67620922	0.0538352	AUUGCAC	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr3_+_33799791_33799955	0.0535433	AUUGCAC	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr1_+_184034381_184034437	0.0529372	AUUGCAC	ENSMUST00000048655.7|Dusp10|ENSMUSG00000039384.8|dual specificity phosphatase 10
mm10_v2_chr4_+_13743424_13743478	0.0521767	AUUGCAC	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr2_-_113217051_113217094	0.0514984	AUUGCAC	ENSMUST00000080673.5|Ryr3|ENSMUSG00000057378.8|ryanodine receptor 3
mm10_v2_chr11_-_116027961_116027978	0.0513184	AUUGCAC	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr11_+_43682038_43682060	0.0511314	AUUGCAC	ENSMUST00000094294.4|Pwwp2a|ENSMUSG00000044950.7|PWWP domain containing 2A
mm10_v2_chr11_-_61930246_61930257	0.0500924	AUUGCAC	ENSMUST00000102650.3|Akap10|ENSMUSG00000047804.9|A kinase (PRKA) anchor protein 10
mm10_v2_chr14_-_26971232_26971232	0.0500206	AUUGCAC	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chrX_+_68678541_68678554	0.0499625	AUUGCAC	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr1_-_178337774_178337797	0.0494298	AUUGCAC	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr18_-_61400363_61400449	0.0493209	AUUGCAC	ENSMUST00000063307.5|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta 	ENSMUST00000075299.6|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm10_v2_chr17_-_42876417_42876431	0.0492602	AUUGCAC	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chrX_-_75130996_75131016	0.0491406	AUUGCAC	ENSMUST00000033775.2|Mpp1|ENSMUSG00000031402.6|membrane protein, palmitoylated
mm10_v2_chr17_+_42315947_42315947	0.0491394	AUUGCAC	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr1_-_190170671_190170744	0.0480478	AUUGCAC	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr17_+_27856443_27856511	0.0479423	AUUGCAC	ENSMUST00000114849.1|Uhrf1bp1|ENSMUSG00000039512.11|UHRF1 (ICBP90) binding protein 1
mm10_v2_chr11_-_120047070_120047129	0.0473949	AUUGCAC	ENSMUST00000064307.3|Aatk|ENSMUSG00000025375.9|apoptosis-associated tyrosine kinase
mm10_v2_chr11_-_76217490_76217664	0.0468405	AUUGCAC	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr11_+_77763246_77763339	0.046837	AUUGCAC	ENSMUST00000108375.2|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr15_+_32920723_32920826	0.0466869	AUUGCAC	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr6_-_99266494_99266540	0.0465593	AUUGCAC	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr10_+_108162358_108162408	0.0465173	AUUGCAC	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr11_-_65788275_65788318	0.0459769	AUUGCAC	ENSMUST00000152096.1|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4 	ENSMUST00000046963.3|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4
mm10_v2_chr12_-_46818749_46818788	0.045565	AUUGCAC	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr19_+_3708287_3708395	0.0454703	AUUGCAC	ENSMUST00000039048.1|1810055G02Rik|ENSMUSG00000035372.1|RIKEN cDNA 1810055G02 gene
mm10_v2_chr8_+_65618009_65618091	0.0450064	AUUGCAC	ENSMUST00000110258.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110256.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110255.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr1_+_37997975_37998010	0.0445702	AUUGCAC	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr13_-_93499803_93499825	0.0443035	AUUGCAC	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr4_-_138913915_138913983	0.0439813	AUUGCAC	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr19_-_59345746_59345853	0.0438883	AUUGCAC	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr2_+_72285637_72285749	0.0437369	AUUGCAC	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr1_+_59764264_59764286	0.0436885	AUUGCAC	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr11_-_94677404_94677515	0.0434937	AUUGCAC	ENSMUST00000116349.2|Xylt2|ENSMUSG00000020868.9|xylosyltransferase II
mm10_v2_chr9_+_72532214_72532271	0.0430972	AUUGCAC	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr13_+_55635002_55635036	0.0429633	AUUGCAC	ENSMUST00000172272.1|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENSMUST00000099479.3|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm10_v2_chr16_+_87698904_87698959	0.0426297	AUUGCAC	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr19_+_41911851_41911874	0.0424157	AUUGCAC	ENSMUST00000011896.6|Pgam1|ENSMUSG00000011752.6|phosphoglycerate mutase 1
mm10_v2_chr3_-_86920830_86920977	0.0420732	AUUGCAC	ENSMUST00000029719.8|Dclk2|ENSMUSG00000028078.9|doublecortin-like kinase 2
mm10_v2_chr9_-_86880414_86880467	0.0418155	AUUGCAC	ENSMUST00000074501.5|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000098495.3|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000074468.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000036347.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr3_+_34020075_34020082	0.0417109	AUUGCAC	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr2_-_181592733_181592803	0.0415084	AUUGCAC	ENSMUST00000108789.2|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B 	ENSMUST00000153998.1|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B
mm10_v2_chr1_-_51915968_51916071	0.0414418	AUUGCAC	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_+_5951440_5951469	0.0413127	AUUGCAC	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr13_+_42052015_42052072	0.0394362	AUUGCAC	ENSMUST00000060148.5|Hivep1|ENSMUSG00000021366.7|human immunodeficiency virus type I enhancer binding protein 1
mm10_v2_chr12_+_56695628_56695700	0.0393874	AUUGCAC	ENSMUST00000001538.9|Pax9|ENSMUSG00000001497.12|paired box gene 9
mm10_v2_chr17_-_74323896_74323954	0.0389418	AUUGCAC	ENSMUST00000164832.1|Dpy30|ENSMUSG00000024067.7|dpy-30 homolog (C. elegans)
mm10_v2_chr12_-_32061221_32061301	0.0388411	AUUGCAC	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr17_-_31855782_31855802	0.0388239	AUUGCAC	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr18_-_64660981_64661010	0.0387991	AUUGCAC	ENSMUST00000025482.8|Atp8b1|ENSMUSG00000039529.8|ATPase, class I, type 8B, member 1
mm10_v2_chr2_+_160645881_160645896	0.0379985	AUUGCAC	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr4_-_136956784_136956871	0.0378545	AUUGCAC	ENSMUST00000030420.8|Epha8|ENSMUSG00000028661.8|Eph receptor A8
mm10_v2_chr1_-_155972887_155972890	0.0373416	AUUGCAC	ENSMUST00000138762.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350 	ENSMUST00000124495.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350
mm10_v2_chr13_+_54071815_54071859	0.0367718	AUUGCAC	ENSMUST00000021930.8|Sfxn1|ENSMUSG00000021474.8|sideroflexin 1
mm10_v2_chr3_+_36863102_36863147	0.0366831	AUUGCAC	ENSMUST00000057272.8|4932438A13Rik|ENSMUSG00000037270.11|RIKEN cDNA 4932438A13 gene
mm10_v2_chr5_+_23434435_23434471	0.0351554	AUUGCAC	ENSMUST00000094962.2|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E 	ENSMUST00000115128.1|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E
mm10_v2_chr12_-_4477138_4477196	0.0351416	AUUGCAC	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chr16_+_42907563_42907684	0.0349437	AUUGCAC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr9_+_14276301_14276347	0.0338625	AUUGCAC	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr3_+_32436151_32436151	0.0334734	AUUGCAC	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr9_-_32541589_32541602	0.0333651	AUUGCAC	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr4_+_80910646_80910685	0.0330526	AUUGCAC	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chr1_+_64532790_64532815	0.0330521	AUUGCAC	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr6_+_4903298_4903346	0.0327853	AUUGCAC	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr4_-_154636831_154636873	0.0325962	AUUGCAC	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr1_+_131910458_131910539	0.0324784	AUUGCAC	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr2_+_93642307_93642388	0.0324035	AUUGCAC	ENSMUST00000042078.3|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4 	ENSMUST00000111254.1|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4
mm10_v2_chr7_+_82335732_82335732	0.032131	AUUGCAC	ENSMUST00000173287.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr10_-_23787195_23787206	0.0311915	AUUGCAC	ENSMUST00000073926.6|Rps12|ENSMUSG00000061983.6|ribosomal protein S12
mm10_v2_chr15_-_77842133_77842175	0.0311245	AUUGCAC	ENSMUST00000016771.6|Myh9|ENSMUSG00000022443.10|myosin, heavy polypeptide 9, non-muscle
mm10_v2_chr16_+_33380765_33380787	0.0310954	AUUGCAC	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr14_+_49066495_49066587	0.0309866	AUUGCAC	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr7_-_143460989_143461050	0.0309788	AUUGCAC	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr12_+_3426857_3426931	0.0306818	AUUGCAC	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr6_+_108213086_108213123	0.0303917	AUUGCAC	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr8_+_27085520_27085598	0.0299974	AUUGCAC	ENSMUST00000178514.1|Gpr124|ENSMUSG00000031486.8|G protein-coupled receptor 124 	ENSMUST00000033876.7|Gpr124|ENSMUSG00000031486.8|G protein-coupled receptor 124
mm10_v2_chr16_-_46010212_46010223	0.0298981	AUUGCAC	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr9_-_42124276_42124333	0.0293897	AUUGCAC	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr6_-_39725448_39725478	0.0292886	AUUGCAC	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr4_+_48124903_48124938	0.0289956	AUUGCAC	ENSMUST00000107721.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000153502.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000107720.2|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000064765.4|Stx17|ENSMUSG00000061455.7|syntaxin 17
mm10_v2_chr9_-_24774276_24774303	0.0288988	AUUGCAC	ENSMUST00000052946.4|Tbx20|ENSMUSG00000031965.8|T-box 20 	ENSMUST00000166018.2|Tbx20|ENSMUSG00000031965.8|T-box 20
mm10_v2_chr6_-_129275360_129275376	0.0285221	AUUGCAC	ENSMUST00000032259.3|Cd69|ENSMUSG00000030156.3|CD69 antigen
mm10_v2_chr14_+_27622433_27622543	0.0283366	AUUGCAC	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr4_-_44167580_44167608	0.0278983	AUUGCAC	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr11_+_60417238_60417301	0.0271961	AUUGCAC	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr19_+_29522263_29522341	0.0271633	AUUGCAC	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr14_-_103346765_103346841	0.0269992	AUUGCAC	ENSMUST00000159855.1|Mycbp2|ENSMUSG00000033004.8|MYC binding protein 2
mm10_v2_chr4_+_86053887_86053987	0.0268133	AUUGCAC	ENSMUST00000107178.2|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000048885.5|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000141889.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000120678.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1
mm10_v2_chrX_+_13280970_13281031	0.0268073	AUUGCAC	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr5_+_108461222_108461241	0.026523	AUUGCAC	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr19_-_59943647_59943678	0.0264709	AUUGCAC	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr12_-_51691883_51691925	0.026252	AUUGCAC	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr11_+_77686155_77686179	0.026092	AUUGCAC	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr15_+_81400132_81400215	0.0253823	AUUGCAC	ENSMUST00000163754.1|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative 	ENSMUST00000041609.4|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
mm10_v2_chr15_-_5244178_5244192	0.0249796	AUUGCAC	ENSMUST00000047379.8|Ptger4|ENSMUSG00000039942.9|prostaglandin E receptor 4 (subtype EP4)
mm10_v2_chr5_+_57718021_57718104	0.0246397	AUUGCAC	ENSMUST00000094783.3|Pcdh7|ENSMUSG00000029108.8|protocadherin 7 	ENSMUST00000068110.7|Pcdh7|ENSMUSG00000029108.8|protocadherin 7
mm10_v2_chr8_-_46152159_46152159	0.0245578	AUUGCAC	ENSMUST00000110378.2|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr13_+_55693082_55693151	0.0245078	AUUGCAC	ENSMUST00000057844.8|B230219D22Rik|ENSMUSG00000045767.8|RIKEN cDNA B230219D22 gene
mm10_v2_chr7_-_105399991_105400054	0.0242725	AUUGCAC	ENSMUST00000118726.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000074686.7|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000122327.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000179474.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000048079.6|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2
mm10_v2_chr8_-_109737714_109737786	0.0235048	AUUGCAC	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr19_+_56722372_56722372	0.0233387	AUUGCAC	ENSMUST00000038949.4|Adrb1|ENSMUSG00000035283.4|adrenergic receptor, beta 1
mm10_v2_chr10_-_119240006_119240092	0.023266	AUUGCAC	ENSMUST00000020315.6|Cand1|ENSMUSG00000020114.6|cullin associated and neddylation disassociated 1
mm10_v2_chr1_-_97661950_97662074	0.0230474	AUUGCAC	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chr3_+_41555723_41555745	0.0229608	AUUGCAC	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr8_-_80057989_80058017	0.022731	AUUGCAC	ENSMUST00000079038.2|Hhip|ENSMUSG00000064325.3|Hedgehog-interacting protein
mm10_v2_chr11_+_75588064_75588151	0.0224816	AUUGCAC	ENSMUST00000143219.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha 	ENSMUST00000179521.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha 	ENSMUST00000179445.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha
mm10_v2_chr14_+_111675113_111675119	0.0224053	AUUGCAC	ENSMUST00000042767.7|Slitrk5|ENSMUSG00000033214.9|SLIT and NTRK-like family, member 5
mm10_v2_chr13_+_13590402_13590456	0.0218249	AUUGCAC	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr4_+_124802543_124802678	0.0216767	AUUGCAC	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr2_+_4718145_4718205	0.0215478	AUUGCAC	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr18_-_13972617_13972733	0.0212742	AUUGCAC	ENSMUST00000025288.7|Zfp521|ENSMUSG00000024420.8|zinc finger protein 521
mm10_v2_chr19_+_41482632_41482688	0.0210393	AUUGCAC	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr11_-_74724670_74724702	0.0208346	AUUGCAC	ENSMUST00000021091.8|Pafah1b1|ENSMUSG00000020745.9|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm10_v2_chr1_+_174501796_174501843	0.0206755	AUUGCAC	ENSMUST00000030039.7|Fmn2|ENSMUSG00000028354.8|formin 2
mm10_v2_chr14_-_74947865_74947883	0.0201235	AUUGCAC	ENSMUST00000088970.5|Lrch1|ENSMUSG00000068015.6|leucine-rich repeats and calponin homology (CH) domain containing 1
mm10_v2_chr2_-_68472138_68472268	0.0201206	AUUGCAC	ENSMUST00000102715.3|Stk39|ENSMUSG00000027030.9|serine/threonine kinase 39
mm10_v2_chr11_-_118290188_118290244	0.0199998	AUUGCAC	ENSMUST00000106296.2|Usp36|ENSMUSG00000033909.11|ubiquitin specific peptidase 36 	ENSMUST00000092382.3|Usp36|ENSMUSG00000033909.11|ubiquitin specific peptidase 36
mm10_v2_chr4_-_136021722_136021763	0.0199456	AUUGCAC	ENSMUST00000030427.5|Tceb3|ENSMUSG00000028668.5|transcription elongation factor B (SIII), polypeptide 3
mm10_v2_chr8_-_80739497_80739497	0.0198677	AUUGCAC	ENSMUST00000043359.8|Smarca5|ENSMUSG00000031715.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm10_v2_chr5_-_102069905_102069940	0.0197762	AUUGCAC	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr2_-_60125651_60125775	0.0195934	AUUGCAC	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr17_-_6961156_6961156	0.0194033	AUUGCAC	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr15_-_77307043_77307058	0.0193007	AUUGCAC	ENSMUST00000048145.5|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000171751.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr6_+_30401866_30401965	0.018946	AUUGCAC	ENSMUST00000068240.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10 	ENSMUST00000068259.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10
mm10_v2_chr18_+_42275353_42275392	0.018781	AUUGCAC	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr7_+_35119285_35119301	0.0187044	AUUGCAC	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr15_-_8444449_8444506	0.0186839	AUUGCAC	ENSMUST00000052965.6|Nipbl|ENSMUSG00000022141.6|Nipped-B homolog (Drosophila)
mm10_v2_chr4_+_124700700_124700728	0.0186548	AUUGCAC	ENSMUST00000106199.3|Fhl3|ENSMUSG00000032643.6|four and a half LIM domains 3 	ENSMUST00000038684.5|Fhl3|ENSMUSG00000032643.6|four and a half LIM domains 3
mm10_v2_chr18_-_77713978_77714010	0.0185303	AUUGCAC	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr13_+_43398375_43398402	0.0184436	AUUGCAC	ENSMUST00000071926.3|Nol7|ENSMUSG00000063200.3|nucleolar protein 7
mm10_v2_chr14_-_18270953_18271067	0.017903	AUUGCAC	ENSMUST00000100799.2|Rpl15|ENSMUSG00000012405.9|ribosomal protein L15 	ENSMUST00000079419.4|Rpl15|ENSMUSG00000012405.9|ribosomal protein L15 	ENSMUST00000080281.7|Rpl15|ENSMUSG00000012405.9|ribosomal protein L15
mm10_v2_chr8_+_79028587_79028654	0.0177417	AUUGCAC	ENSMUST00000119254.1|Zfp827|ENSMUSG00000071064.7|zinc finger protein 827
mm10_v2_chr11_+_35769462_35769484	0.0174713	AUUGCAC	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr3_+_97658212_97658339	0.0172036	AUUGCAC	ENSMUST00000045743.6|Prkab2|ENSMUSG00000038205.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
mm10_v2_chr14_-_69732510_69732581	0.0171823	AUUGCAC	ENSMUST00000036381.8|Chmp7|ENSMUSG00000034190.8|charged multivesicular body protein 7
mm10_v2_chr5_+_34336289_34336395	0.0169088	AUUGCAC	ENSMUST00000182709.1|Rnf4|ENSMUSG00000029110.7|ring finger protein 4 	ENSMUST00000030992.6|Rnf4|ENSMUSG00000029110.7|ring finger protein 4
mm10_v2_chr11_-_86544754_86544805	0.0164896	AUUGCAC	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr15_-_93275151_93275178	0.0162635	AUUGCAC	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr11_-_96065350_96065388	0.0161859	AUUGCAC	ENSMUST00000100528.4|Ube2z|ENSMUSG00000014349.7|ubiquitin-conjugating enzyme E2Z (putative)
mm10_v2_chr3_-_133544390_133544412	0.0161279	AUUGCAC	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr16_+_93832121_93832308	0.0160722	AUUGCAC	ENSMUST00000044068.6|Morc3|ENSMUSG00000039456.6|microrchidia 3
mm10_v2_chr1_+_63445842_63445943	0.0154987	AUUGCAC	ENSMUST00000087374.3|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000114107.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000182642.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23
mm10_v2_chr12_+_40446050_40446099	0.015486	AUUGCAC	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr15_-_96699698_96699717	0.0148053	AUUGCAC	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr2_-_48949206_48949276	0.0147689	AUUGCAC	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr2_+_15055274_15055379	0.0145776	AUUGCAC	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr1_+_138963709_138963808	0.0143777	AUUGCAC	ENSMUST00000168527.1|Dennd1b|ENSMUSG00000056268.9|DENN/MADD domain containing 1B
mm10_v2_chr13_-_81710937_81711013	0.0142188	AUUGCAC	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr19_-_37207293_37207508	0.0139987	AUUGCAC	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr5_+_105699945_105700041	0.0139842	AUUGCAC	ENSMUST00000060531.9|Lrrc8d|ENSMUSG00000046079.10|leucine rich repeat containing 8D
mm10_v2_chr1_+_74236479_74236598	0.0133698	AUUGCAC	ENSMUST00000113820.2|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2 	ENSMUST00000006467.7|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2 	ENSMUST00000113819.1|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2
mm10_v2_chr6_+_122874526_122874573	0.0133393	AUUGCAC	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr13_+_119428888_119428960	0.0128815	AUUGCAC	ENSMUST00000026520.7|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr13_-_98815408_98815449	0.0128558	AUUGCAC	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr8_+_111033890_111033932	0.0128443	AUUGCAC	ENSMUST00000034441.7|Aars|ENSMUSG00000031960.8|alanyl-tRNA synthetase
mm10_v2_chr13_+_91461050_91461125	0.0126717	AUUGCAC	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr2_-_73312701_73312724	0.0121032	AUUGCAC	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr5_-_3803081_3803119	0.0119351	AUUGCAC	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr9_-_63146980_63147011	0.0111999	AUUGCAC	ENSMUST00000055281.7|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1 	ENSMUST00000119146.1|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1
mm10_v2_chr8_-_84800024_84800283	0.0105681	AUUGCAC	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr2_+_32151074_32151262	0.00964336	AUUGCAC	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr5_+_65763518_65763541	0.00943836	AUUGCAC	ENSMUST00000113738.1|N4bp2|ENSMUSG00000037795.8|NEDD4 binding protein 2
mm10_v2_chr12_+_73901370_73901391	0.00913239	AUUGCAC	ENSMUST00000110461.1|Hif1a|ENSMUSG00000021109.7|hypoxia inducible factor 1, alpha subunit
mm10_v2_chr15_+_44619551_44619641	0.00893973	AUUGCAC	ENSMUST00000022964.7|Ebag9|ENSMUSG00000022339.8|estrogen receptor-binding fragment-associated gene 9
mm10_v2_chr15_-_28025834_28025879	0.00887978	AUUGCAC	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr2_-_172043466_172043466	0.00807365	AUUGCAC	ENSMUST00000087950.3|Cbln4|ENSMUSG00000067578.3|cerebellin 4 precursor protein
mm10_v2_chr18_-_72351029_72351073	0.0080036	AUUGCAC	ENSMUST00000114943.3|Dcc|ENSMUSG00000060534.9|deleted in colorectal carcinoma
mm10_v2_chr13_-_40733768_40733836	0.00789394	AUUGCAC	ENSMUST00000110193.2|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr10_+_7681197_7681225	0.00784819	AUUGCAC	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr9_+_58629102_58629110	0.00742604	AUUGCAC	ENSMUST00000176250.1|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr3_-_19163011_19163085	0.00740222	AUUGCAC	ENSMUST00000029125.8|Armc1|ENSMUSG00000027599.8|armadillo repeat containing 1
mm10_v2_chr1_-_16619437_16619489	0.00726613	AUUGCAC	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr14_+_14012491_14012693	0.00726604	AUUGCAC	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr11_+_54438188_54438220	0.00705552	AUUGCAC	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr14_-_100149764_100149764	0.00704406	AUUGCAC	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr6_+_4505493_4505493	0.00703538	AUUGCAC	ENSMUST00000031668.8|Col1a2|ENSMUSG00000029661.10|collagen, type I, alpha 2
mm10_v2_chr8_+_88118747_88118777	0.00700539	AUUGCAC	ENSMUST00000095214.3|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr8_+_88199194_88199224	0.00692745	AUUGCAC	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr10_-_81167896_81167923	0.00684953	AUUGCAC	ENSMUST00000005064.7|Pias4|ENSMUSG00000004934.7|protein inhibitor of activated STAT 4
mm10_v2_chr9_+_74953053_74953091	0.00652617	AUUGCAC	ENSMUST00000170846.1|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr10_-_116581478_116581511	0.00636656	AUUGCAC	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr16_+_20589471_20589582	0.00602389	AUUGCAC	ENSMUST00000100074.3|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2 	ENSMUST00000096197.4|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2
mm10_v2_chr2_-_172940299_172940349	0.00590916	AUUGCAC	ENSMUST00000009143.7|Bmp7|ENSMUSG00000008999.7|bone morphogenetic protein 7
mm10_v2_chr9_-_108263887_108263965	0.00581252	AUUGCAC	ENSMUST00000166905.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1 	ENSMUST00000080435.2|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr9_-_119322421_119322449	0.00579106	AUUGCAC	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr17_-_10319324_10319380	0.00565235	AUUGCAC	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr15_+_80711292_80711340	0.00544447	AUUGCAC	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr3_+_152210458_152210534	0.00524993	AUUGCAC	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr2_+_82053222_82053311	0.00480328	AUUGCAC	ENSMUST00000047527.7|Zfp804a|ENSMUSG00000070866.4|zinc finger protein 804A
mm10_v2_chr19_+_16132812_16132910	0.00474165	AUUGCAC	ENSMUST00000025541.5|Gnaq|ENSMUSG00000024639.5|guanine nucleotide binding protein, alpha q polypeptide
mm10_v2_chr10_+_122678764_122678811	0.00459277	AUUGCAC	ENSMUST00000161487.1|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing) 	ENSMUST00000067918.5|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing)
mm10_v2_chr10_+_81292961_81293005	0.00442274	AUUGCAC	ENSMUST00000163075.1|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000105327.3|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000045469.8|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm10_v2_chr4_-_134018829_134018841	0.00441162	AUUGCAC	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr10_-_121476248_121476275	0.0043536	AUUGCAC	ENSMUST00000026902.7|Rassf3|ENSMUSG00000025795.7|Ras association (RalGDS/AF-6) domain family member 3
mm10_v2_chr1_-_56972437_56972502	0.00430934	AUUGCAC	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr12_-_98577940_98578046	0.00404223	AUUGCAC	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr1_+_133246092_133246099	0.00399748	AUUGCAC	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr13_-_98891036_98891063	0.0039611	AUUGCAC	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr12_+_53248677_53248677	0.00394973	AUUGCAC	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr14_+_11553523_11553542	0.0037127	AUUGCAC	ENSMUST00000022264.6|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr13_-_69533839_69533839	0.00361108	AUUGCAC	ENSMUST00000044081.7|Papd7|ENSMUSG00000034575.7|PAP associated domain containing 7
mm10_v2_chr3_+_88142328_88142483	0.00357113	AUUGCAC	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr3_-_115715031_115715062	0.00306421	AUUGCAC	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr12_-_4738375_4738388	0.0029155	AUUGCAC	ENSMUST00000111154.2|Fam228a|ENSMUSG00000079177.2|family with sequence similarity 228, member A
mm10_v2_chr18_+_57878620_57878678	0.00290823	AUUGCAC	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr17_-_46831413_46831413	0.002555	AUUGCAC	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chr13_+_45389734_45389750	0.00223597	AUUGCAC	ENSMUST00000038275.9|Mylip|ENSMUSG00000038175.9|myosin regulatory light chain interacting protein
mm10_v2_chr16_-_5049882_5049910	0.00213943	AUUGCAC	ENSMUST00000023189.7|Glyr1|ENSMUSG00000022536.7|glyoxylate reductase 1 homolog (Arabidopsis) 	ENSMUST00000115844.1|Glyr1|ENSMUSG00000022536.7|glyoxylate reductase 1 homolog (Arabidopsis)
mm10_v2_chr7_+_120677579_120677630	0.0020698	AUUGCAC	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr1_-_183369529_183369529	0.0019775	AUUGCAC	ENSMUST00000069922.5|Mia3|ENSMUSG00000056050.6|melanoma inhibitory activity 3
mm10_v2_chr11_-_21370452_21370485	0.00190425	AUUGCAC	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr9_+_65032413_65032466	0.00181971	AUUGCAC	ENSMUST00000034960.6|Dpp8|ENSMUSG00000032393.8|dipeptidylpeptidase 8
mm10_v2_chr7_+_46033698_46033823	0.00148972	AUUGCAC	ENSMUST00000033121.6|Nomo1|ENSMUSG00000030835.6|nodal modulator 1
mm10_v2_chr4_+_21727695_21727716	0.00145463	AUUGCAC	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr15_+_18818895_18818947	0.00121445	AUUGCAC	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr2_+_165992625_165992667	0.00117781	AUUGCAC	ENSMUST00000109252.1|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3 	ENSMUST00000088095.5|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3
mm10_v2_chr1_-_151428440_151428474	0.000891517	AUUGCAC	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr17_+_86167777_86167795	0.000252899	AUUGCAC	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
