mm10_v2_chr10_+_4611971_4612021	1.84879	CAGUGCA	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr4_-_91372028_91372069	1.0174	CAGUGCA	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr3_-_73056943_73056943	0.957839	CAGUGCA	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr11_-_119547744_119547759	0.939941	CAGUGCA	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr13_+_46418266_46418316	0.693936	CAGUGCA	ENSMUST00000037923.3|Rbm24|ENSMUSG00000038132.5|RNA binding motif protein 24
mm10_v2_chr5_+_33995984_33996030	0.670645	CAGUGCA	ENSMUST00000056355.8|Nat8l|ENSMUSG00000048142.8|N-acetyltransferase 8-like
mm10_v2_chr9_-_21852603_21852644	0.572474	CAGUGCA	ENSMUST00000034728.7|Dock6|ENSMUSG00000032198.8|dedicator of cytokinesis 6
mm10_v2_chr9_-_20959785_20959888	0.571066	CAGUGCA	ENSMUST00000177754.1|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr11_-_90390895_90390926	0.564029	CAGUGCA	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr1_-_21961581_21961581	0.548432	CAGUGCA	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr1_-_9700209_9700329	0.532104	CAGUGCA	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr12_-_102704896_102704980	0.505639	CAGUGCA	ENSMUST00000178697.1|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase 	ENSMUST00000046518.5|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase
mm10_v2_chr14_+_45219993_45219993	0.500388	CAGUGCA	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr9_+_118606687_118606751	0.482982	CAGUGCA	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chrX_-_157492280_157492340	0.47823	CAGUGCA	ENSMUST00000112529.1|Sms|ENSMUSG00000071708.5|spermine synthase
mm10_v2_chr9_+_95559817_95559960	0.46296	CAGUGCA	ENSMUST00000079597.5|Paqr9|ENSMUSG00000064225.5|progestin and adipoQ receptor family member IX
mm10_v2_chr7_+_18925863_18925899	0.453427	CAGUGCA	ENSMUST00000172835.1|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2 	ENSMUST00000032571.8|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2
mm10_v2_chr18_+_60925612_60925639	0.451898	CAGUGCA	ENSMUST00000102888.3|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000025519.4|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr14_-_46822232_46822266	0.437946	CAGUGCA	ENSMUST00000111817.1|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta 	ENSMUST00000079314.5|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta
mm10_v2_chr1_+_187997821_187997834	0.432347	CAGUGCA	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr2_-_125506385_125506408	0.415913	CAGUGCA	ENSMUST00000028633.6|Fbn1|ENSMUSG00000027204.7|fibrillin 1
mm10_v2_chr7_+_28179469_28179535	0.411209	CAGUGCA	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr4_+_140700487_140700541	0.399417	CAGUGCA	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr8_+_95352258_95352329	0.396315	CAGUGCA	ENSMUST00000034243.5|Mmp15|ENSMUSG00000031790.7|matrix metallopeptidase 15
mm10_v2_chr2_+_131186942_131186971	0.392041	CAGUGCA	ENSMUST00000028804.8|Cdc25b|ENSMUSG00000027330.10|cell division cycle 25B 	ENSMUST00000079857.8|Cdc25b|ENSMUSG00000027330.10|cell division cycle 25B
mm10_v2_chr10_+_110745433_110745572	0.383239	CAGUGCA	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr2_+_25180737_25180764	0.380056	CAGUGCA	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr9_-_48835932_48835962	0.37863	CAGUGCA	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr12_+_37108533_37108546	0.373611	CAGUGCA	ENSMUST00000041183.5|Meox2|ENSMUSG00000036144.5|mesenchyme homeobox 2
mm10_v2_chr7_-_38107490_38107534	0.373138	CAGUGCA	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr9_+_51765325_51765364	0.368794	CAGUGCA	ENSMUST00000065496.5|Arhgap20|ENSMUSG00000053199.7|Rho GTPase activating protein 20
mm10_v2_chr9_+_47530173_47530373	0.367644	CAGUGCA	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chrX_-_142966709_142966734	0.356012	CAGUGCA	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr16_+_57121705_57121761	0.355439	CAGUGCA	ENSMUST00000166897.1|Tomm70a|ENSMUSG00000022752.8|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm10_v2_chr9_+_72532214_72532271	0.346343	CAGUGCA	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr3_+_90341654_90341654	0.345405	CAGUGCA	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr9_+_95637601_95637632	0.330722	CAGUGCA	ENSMUST00000015498.8|Pcolce2|ENSMUSG00000015354.8|procollagen C-endopeptidase enhancer 2
mm10_v2_chr6_-_67037399_67037417	0.322643	CAGUGCA	ENSMUST00000043098.6|Gadd45a|ENSMUSG00000036390.6|growth arrest and DNA-damage-inducible 45 alpha
mm10_v2_chr14_+_45351473_45351473	0.3206	CAGUGCA	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr16_+_30599717_30599734	0.318568	CAGUGCA	ENSMUST00000059078.3|Fam43a|ENSMUSG00000046546.3|family with sequence similarity 43, member A
mm10_v2_chr15_-_73184840_73184971	0.317654	CAGUGCA	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr11_+_120232921_120232952	0.316078	CAGUGCA	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr9_+_15306212_15306219	0.302301	CAGUGCA	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr9_+_121366958_121367042	0.297475	CAGUGCA	ENSMUST00000045903.6|Trak1|ENSMUSG00000032536.9|trafficking protein, kinesin binding 1
mm10_v2_chr18_+_14783238_14783259	0.297081	CAGUGCA	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr13_+_44731265_44731276	0.292971	CAGUGCA	ENSMUST00000173246.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr17_-_24251382_24251409	0.278718	CAGUGCA	ENSMUST00000115390.3|Ccnf|ENSMUSG00000072082.6|cyclin F
mm10_v2_chr11_-_88851462_88851522	0.274313	CAGUGCA	ENSMUST00000107903.1|Akap1|ENSMUSG00000018428.9|A kinase (PRKA) anchor protein 1
mm10_v2_chr18_+_84088077_84088178	0.271659	CAGUGCA	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr9_+_22099271_22099287	0.267061	CAGUGCA	ENSMUST00000001384.4|Cnn1|ENSMUSG00000001349.4|calponin 1
mm10_v2_chr2_+_156196642_156196775	0.255995	CAGUGCA	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr17_+_34670535_34670535	0.254556	CAGUGCA	ENSMUST00000168533.1|Tnxb|ENSMUSG00000033327.10|tenascin XB 	ENSMUST00000087399.4|Tnxb|ENSMUSG00000033327.10|tenascin XB
mm10_v2_chr3_+_51415986_51416044	0.252755	CAGUGCA	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr3_-_36571952_36572150	0.249894	CAGUGCA	ENSMUST00000029270.3|Ccna2|ENSMUSG00000027715.3|cyclin A2
mm10_v2_chr6_+_113237843_113237874	0.248907	CAGUGCA	ENSMUST00000113146.2|Mtmr14|ENSMUSG00000030269.8|myotubularin related protein 14
mm10_v2_chr5_-_121836852_121836880	0.246527	CAGUGCA	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr2_-_25983236_25983290	0.241549	CAGUGCA	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr12_-_27342696_27342726	0.237894	CAGUGCA	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr18_-_61400363_61400449	0.23625	CAGUGCA	ENSMUST00000063307.5|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta 	ENSMUST00000075299.6|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm10_v2_chr11_-_61579637_61579707	0.235888	CAGUGCA	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr19_+_36926071_36926177	0.233972	CAGUGCA	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chr2_-_20968881_20968957	0.233724	CAGUGCA	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr2_+_14074091_14074146	0.232344	CAGUGCA	ENSMUST00000102960.4|Stam|ENSMUSG00000026718.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm10_v2_chr12_+_4592992_4593087	0.226371	CAGUGCA	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr11_-_76846968_76847045	0.223941	CAGUGCA	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr3_-_50443603_50443615	0.223154	CAGUGCA	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr9_+_62677826_62677843	0.221823	CAGUGCA	ENSMUST00000034774.8|Itga11|ENSMUSG00000032243.8|integrin alpha 11
mm10_v2_chr7_+_73375494_73375549	0.216531	CAGUGCA	ENSMUST00000094312.5|Rgma|ENSMUSG00000070509.9|RGM domain family, member A 	ENSMUST00000119206.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr10_-_71285234_71285262	0.215498	CAGUGCA	ENSMUST00000020085.6|Ube2d1|ENSMUSG00000019927.6|ubiquitin-conjugating enzyme E2D 1
mm10_v2_chr9_+_87022014_87022179	0.213404	CAGUGCA	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr11_-_49712674_49712726	0.211361	CAGUGCA	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr3_+_22076644_22076681	0.20827	CAGUGCA	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr18_+_69345721_69345811	0.202277	CAGUGCA	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr11_-_75796048_75796081	0.200249	CAGUGCA	ENSMUST00000021209.7|Doc2b|ENSMUSG00000020848.7|double C2, beta
mm10_v2_chr1_+_6487231_6487338	0.197222	CAGUGCA	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr18_-_10181792_10181792	0.196647	CAGUGCA	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr8_-_47352348_47352367	0.19282	CAGUGCA	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr11_+_52232009_52232041	0.191625	CAGUGCA	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr13_+_55209776_55209788	0.191203	CAGUGCA	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr19_+_8871636_8871686	0.190644	CAGUGCA	ENSMUST00000096255.5|Ubxn1|ENSMUSG00000071655.5|UBX domain protein 1
mm10_v2_chr2_-_160367057_160367073	0.189441	CAGUGCA	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr5_-_115341142_115341191	0.187289	CAGUGCA	ENSMUST00000139167.1|Gatc|ENSMUSG00000029536.7|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)
mm10_v2_chr2_+_138256530_138256615	0.184131	CAGUGCA	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr13_-_115101909_115101984	0.183757	CAGUGCA	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr1_-_97661950_97662074	0.17661	CAGUGCA	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chr10_+_110920170_110920188	0.174539	CAGUGCA	ENSMUST00000020403.5|Csrp2|ENSMUSG00000020186.6|cysteine and glycine-rich protein 2
mm10_v2_chr3_+_34020075_34020082	0.172571	CAGUGCA	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chrX_+_68678541_68678554	0.169005	CAGUGCA	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr6_-_143947092_143947111	0.168284	CAGUGCA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr17_-_31855782_31855802	0.165847	CAGUGCA	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr7_-_118129567_118129625	0.160861	CAGUGCA	ENSMUST00000032888.7|Arl6ip1|ENSMUSG00000030654.7|ADP-ribosylation factor-like 6 interacting protein 1
mm10_v2_chr11_+_78188422_78188447	0.155165	CAGUGCA	ENSMUST00000002128.7|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family 	ENSMUST00000150941.1|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family
mm10_v2_chr11_-_69413675_69413675	0.152078	CAGUGCA	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr8_-_11312731_11312826	0.150955	CAGUGCA	ENSMUST00000033898.9|Col4a1|ENSMUSG00000031502.9|collagen, type IV, alpha 1
mm10_v2_chr12_-_79296266_79296310	0.149164	CAGUGCA	ENSMUST00000021547.6|Zfyve26|ENSMUSG00000066440.4|zinc finger, FYVE domain containing 26
mm10_v2_chr15_+_6708372_6708396	0.148533	CAGUGCA	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr2_+_163994960_163994960	0.14727	CAGUGCA	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr2_+_145167706_145167773	0.147212	CAGUGCA	ENSMUST00000110007.1|Slc24a3|ENSMUSG00000063873.4|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm10_v2_chr5_-_52190484_52190524	0.146425	CAGUGCA	ENSMUST00000031061.7|Dhx15|ENSMUSG00000029169.7|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm10_v2_chr13_-_56135629_56135655	0.138866	CAGUGCA	ENSMUST00000016081.6|H2afy|ENSMUSG00000015937.8|H2A histone family, member Y 	ENSMUST00000045788.7|H2afy|ENSMUSG00000015937.8|H2A histone family, member Y
mm10_v2_chr9_+_75037614_75037701	0.13881	CAGUGCA	ENSMUST00000168166.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000169492.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000170308.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr10_+_40349265_40349387	0.136727	CAGUGCA	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr15_-_98004695_98004708	0.133942	CAGUGCA	ENSMUST00000023123.8|Col2a1|ENSMUSG00000022483.10|collagen, type II, alpha 1
mm10_v2_chr19_-_18631754_18631824	0.132154	CAGUGCA	ENSMUST00000025631.6|Ostf1|ENSMUSG00000024725.6|osteoclast stimulating factor 1
mm10_v2_chr2_+_152226839_152226908	0.131873	CAGUGCA	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr15_-_79742518_79742562	0.128767	CAGUGCA	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr9_-_30922452_30922567	0.125825	CAGUGCA	ENSMUST00000065112.6|Adamts15|ENSMUSG00000033453.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm10_v2_chr15_-_99772395_99772462	0.121732	CAGUGCA	ENSMUST00000109035.4|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr2_+_18064564_18064644	0.121365	CAGUGCA	ENSMUST00000114671.1|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chr8_-_115707778_115707794	0.121322	CAGUGCA	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr5_-_137072254_137072277	0.120504	CAGUGCA	ENSMUST00000077523.3|Serpine1|ENSMUSG00000037411.4|serine (or cysteine) peptidase inhibitor, clade E, member 1 	ENSMUST00000041388.4|Serpine1|ENSMUSG00000037411.4|serine (or cysteine) peptidase inhibitor, clade E, member 1
mm10_v2_chr3_-_105053125_105053151	0.116401	CAGUGCA	ENSMUST00000077548.5|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
mm10_v2_chr9_+_108460518_108460571	0.115918	CAGUGCA	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
mm10_v2_chr15_+_12205009_12205040	0.112575	CAGUGCA	ENSMUST00000038172.8|Mtmr12|ENSMUSG00000039458.8|myotubularin related protein 12
mm10_v2_chr1_+_156558844_156559049	0.110526	CAGUGCA	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr6_+_146724957_146725036	0.108252	CAGUGCA	ENSMUST00000001675.7|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like 	ENSMUST00000111644.1|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like
mm10_v2_chr7_-_142095266_142095306	0.107511	CAGUGCA	ENSMUST00000039926.3|Dusp8|ENSMUSG00000037887.5|dual specificity phosphatase 8
mm10_v2_chr1_+_127204986_127205051	0.106921	CAGUGCA	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
mm10_v2_chr7_-_34230281_34230308	0.105189	CAGUGCA	ENSMUST00000038027.4|Gpi1|ENSMUSG00000036427.4|glucose phosphate isomerase 1
mm10_v2_chr9_+_55326913_55326958	0.104602	CAGUGCA	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr5_+_143622440_143622459	0.101393	CAGUGCA	ENSMUST00000116456.3|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr1_-_181842334_181842401	0.0973344	CAGUGCA	ENSMUST00000005003.6|Lbr|ENSMUSG00000004880.6|lamin B receptor
mm10_v2_chr17_-_66519666_66519727	0.0951824	CAGUGCA	ENSMUST00000167962.1|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family 	ENSMUST00000070538.4|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family
mm10_v2_chr9_-_119322421_119322449	0.0942644	CAGUGCA	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr13_+_5861489_5861501	0.0939594	CAGUGCA	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr5_+_123343834_123343970	0.0914718	CAGUGCA	ENSMUST00000120593.1|Bcl7a|ENSMUSG00000029438.3|B cell CLL/lymphoma 7A
mm10_v2_chr11_+_106066055_106066100	0.0906	CAGUGCA	ENSMUST00000002048.7|Taco1|ENSMUSG00000001983.7|translational activator of mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr3_-_9610074_9610086	0.0891984	CAGUGCA	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr15_-_103366763_103366798	0.0890979	CAGUGCA	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr4_+_14864076_14864150	0.0887469	CAGUGCA	ENSMUST00000029875.3|Tmem55a|ENSMUSG00000028221.3|transmembrane protein 55A
mm10_v2_chr10_-_128589650_128589673	0.0861264	CAGUGCA	ENSMUST00000082059.6|Erbb3|ENSMUSG00000018166.8|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
mm10_v2_chr4_-_132510493_132510509	0.0849661	CAGUGCA	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr3_-_158036630_158036647	0.0847831	CAGUGCA	ENSMUST00000121326.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr7_+_90130227_90130279	0.084684	CAGUGCA	ENSMUST00000049537.7|Picalm|ENSMUSG00000039361.9|phosphatidylinositol binding clathrin assembly protein
mm10_v2_chr13_-_93499803_93499825	0.0839622	CAGUGCA	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr15_+_76351303_76351337	0.0815685	CAGUGCA	ENSMUST00000023212.8|Maf1|ENSMUSG00000022553.9|MAF1 homolog (S. cerevisiae) 	ENSMUST00000160172.1|Maf1|ENSMUSG00000022553.9|MAF1 homolog (S. cerevisiae)
mm10_v2_chr4_-_141139727_141139772	0.0807825	CAGUGCA	ENSMUST00000148204.1|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1 	ENSMUST00000102487.3|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1
mm10_v2_chr3_-_115715031_115715062	0.0804653	CAGUGCA	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr9_+_57708534_57708608	0.0786925	CAGUGCA	ENSMUST00000043990.7|Edc3|ENSMUSG00000038957.7|enhancer of mRNA decapping 3 homolog (S. cerevisiae) 	ENSMUST00000142807.1|Edc3|ENSMUSG00000038957.7|enhancer of mRNA decapping 3 homolog (S. cerevisiae)
mm10_v2_chr7_+_46796088_46796134	0.0783914	CAGUGCA	ENSMUST00000006774.4|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1 	ENSMUST00000165031.1|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1
mm10_v2_chr8_+_109778554_109778558	0.0756836	CAGUGCA	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr10_+_128083273_128083309	0.075434	CAGUGCA	ENSMUST00000026459.5|Atp5b|ENSMUSG00000025393.6|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm10_v2_chr5_-_67847400_67847439	0.0753531	CAGUGCA	ENSMUST00000113652.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000113651.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000037380.8|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm10_v2_chrX_-_16911774_16911774	0.0730257	CAGUGCA	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr10_+_106470281_106470367	0.0709414	CAGUGCA	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr1_-_119422239_119422291	0.0700878	CAGUGCA	ENSMUST00000038765.5|Inhbb|ENSMUSG00000037035.5|inhibin beta-B
mm10_v2_chr8_+_3515378_3515397	0.0670896	CAGUGCA	ENSMUST00000004681.7|Pnpla6|ENSMUSG00000004565.8|patatin-like phospholipase domain containing 6 	ENSMUST00000111070.2|Pnpla6|ENSMUSG00000004565.8|patatin-like phospholipase domain containing 6
mm10_v2_chr16_+_42907563_42907684	0.066807	CAGUGCA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr11_+_69901816_69901894	0.0662765	CAGUGCA	ENSMUST00000177138.1|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000108617.3|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000177476.1|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000061837.4|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila)
mm10_v2_chr14_-_74947865_74947883	0.0631457	CAGUGCA	ENSMUST00000088970.5|Lrch1|ENSMUSG00000068015.6|leucine-rich repeats and calponin homology (CH) domain containing 1
mm10_v2_chr14_-_63543931_63543991	0.0622569	CAGUGCA	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr16_-_85901118_85901133	0.0621368	CAGUGCA	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chr10_+_81136223_81136271	0.0618172	CAGUGCA	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr3_+_40745430_40745459	0.0617702	CAGUGCA	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr9_-_44881274_44881323	0.0612582	CAGUGCA	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr1_-_16619437_16619489	0.0594508	CAGUGCA	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr7_+_112679314_112679325	0.0592101	CAGUGCA	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr4_+_119814495_119814526	0.0588729	CAGUGCA	ENSMUST00000106307.2|Hivep3|ENSMUSG00000028634.10|human immunodeficiency virus type I enhancer binding protein 3
mm10_v2_chr4_-_44167580_44167608	0.0583707	CAGUGCA	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr14_-_47568427_47568436	0.0580978	CAGUGCA	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chrX_-_104413825_104413856	0.0549384	CAGUGCA	ENSMUST00000033695.5|Abcb7|ENSMUSG00000031333.7|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm10_v2_chr4_+_59189240_59189257	0.0548433	CAGUGCA	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr17_-_80480435_80480462	0.0547207	CAGUGCA	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr2_-_119477613_119477705	0.0543664	CAGUGCA	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr7_-_19310035_19310050	0.0537356	CAGUGCA	ENSMUST00000003640.2|Fosb|ENSMUSG00000003545.2|FBJ osteosarcoma oncogene B
mm10_v2_chr7_+_4922251_4922251	0.052744	CAGUGCA	ENSMUST00000047309.5|Nat14|ENSMUSG00000035285.5|N-acetyltransferase 14
mm10_v2_chr12_-_46818749_46818788	0.0513934	CAGUGCA	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr11_+_94990996_94991035	0.0500817	CAGUGCA	ENSMUST00000038696.5|Ppp1r9b|ENSMUSG00000038976.6|protein phosphatase 1, regulatory subunit 9B
mm10_v2_chr16_+_33185045_33185153	0.048689	CAGUGCA	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr2_+_174110340_174110394	0.0484637	CAGUGCA	ENSMUST00000044415.9|Npepl1|ENSMUSG00000039263.10|aminopeptidase-like 1
mm10_v2_chr4_-_149426603_149426749	0.0467479	CAGUGCA	ENSMUST00000103212.3|Ube4b|ENSMUSG00000028960.12|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm10_v2_chr15_-_77307043_77307058	0.0465205	CAGUGCA	ENSMUST00000048145.5|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000171751.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr3_+_152210458_152210534	0.0451244	CAGUGCA	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr7_-_105752193_105752234	0.0436768	CAGUGCA	ENSMUST00000033184.4|Tpp1|ENSMUSG00000030894.4|tripeptidyl peptidase I
mm10_v2_chr2_+_91457501_91457549	0.0433469	CAGUGCA	ENSMUST00000028689.3|Lrp4|ENSMUSG00000027253.9|low density lipoprotein receptor-related protein 4
mm10_v2_chr8_+_121730563_121730589	0.0430628	CAGUGCA	ENSMUST00000026357.5|Jph3|ENSMUSG00000025318.7|junctophilin 3
mm10_v2_chr8_+_121084352_121084474	0.0426113	CAGUGCA	ENSMUST00000181504.1|Foxf1|ENSMUSG00000042812.4|forkhead box F1 	ENSMUST00000050684.1|Foxf1|ENSMUSG00000042812.4|forkhead box F1
mm10_v2_chr6_-_39206782_39206831	0.0409072	CAGUGCA	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr5_-_73647713_73647754	0.0403767	CAGUGCA	ENSMUST00000081170.7|Sgcb|ENSMUSG00000029156.10|sarcoglycan, beta (dystrophin-associated glycoprotein)
mm10_v2_chr6_-_72958465_72958496	0.0400262	CAGUGCA	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr7_-_132852657_132852673	0.039816	CAGUGCA	ENSMUST00000033257.8|Mettl10|ENSMUSG00000030960.10|methyltransferase like 10
mm10_v2_chr1_-_182341585_182341625	0.0387916	CAGUGCA	ENSMUST00000051431.4|Fbxo28|ENSMUSG00000047539.4|F-box protein 28
mm10_v2_chr7_+_120677579_120677630	0.0387704	CAGUGCA	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr1_-_54194048_54194048	0.0385292	CAGUGCA	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr8_+_110721462_110721486	0.0376585	CAGUGCA	ENSMUST00000052457.8|Mtss1l|ENSMUSG00000033763.8|metastasis suppressor 1-like
mm10_v2_chr14_-_45388772_45388836	0.0369781	CAGUGCA	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr8_+_111536492_111536640	0.0369024	CAGUGCA	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr6_+_113307160_113307230	0.036594	CAGUGCA	ENSMUST00000113122.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113119.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113121.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113117.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1
mm10_v2_chr4_-_126468580_126468653	0.0365804	CAGUGCA	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr9_+_31030621_31030700	0.0360356	CAGUGCA	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr18_+_53176345_53176376	0.0358256	CAGUGCA	ENSMUST00000037850.5|Snx2|ENSMUSG00000034484.7|sorting nexin 2
mm10_v2_chr5_-_20951769_20951824	0.0356262	CAGUGCA	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr7_+_105425817_105426002	0.0342151	CAGUGCA	ENSMUST00000181339.1|Cckbr|ENSMUSG00000030898.8|cholecystokinin B receptor 	ENSMUST00000033189.4|Cckbr|ENSMUSG00000030898.8|cholecystokinin B receptor
mm10_v2_chr2_+_127008711_127008756	0.0338486	CAGUGCA	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chr3_-_127409044_127409064	0.0324738	CAGUGCA	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr10_+_94147982_94148023	0.0324722	CAGUGCA	ENSMUST00000105290.2|Nr2c1|ENSMUSG00000005897.8|nuclear receptor subfamily 2, group C, member 1
mm10_v2_chr14_-_33185066_33185131	0.0310852	CAGUGCA	ENSMUST00000061753.8|Wdfy4|ENSMUSG00000051506.10|WD repeat and FYVE domain containing 4 	ENSMUST00000130509.2|Wdfy4|ENSMUSG00000051506.10|WD repeat and FYVE domain containing 4
mm10_v2_chr7_+_19181159_19181204	0.0303773	CAGUGCA	ENSMUST00000120595.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2 	ENSMUST00000048502.8|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr7_+_126776939_126777213	0.0301962	CAGUGCA	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr17_-_66449715_66449759	0.0298663	CAGUGCA	ENSMUST00000086693.5|Soga2|ENSMUSG00000052105.10|SOGA family member 2 	ENSMUST00000097291.3|Soga2|ENSMUSG00000052105.10|SOGA family member 2
mm10_v2_chr10_-_43174521_43174569	0.0293413	CAGUGCA	ENSMUST00000040275.7|Sobp|ENSMUSG00000038248.7|sine oculis-binding protein homolog (Drosophila)
mm10_v2_chr3_-_90052463_90052521	0.0274447	CAGUGCA	ENSMUST00000029553.9|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like 	ENSMUST00000064639.8|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like 	ENSMUST00000090908.6|Ubap2l|ENSMUSG00000042520.10|ubiquitin associated protein 2-like
mm10_v2_chr5_-_51553896_51553921	0.0268148	CAGUGCA	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr5_+_33820695_33820835	0.0266051	CAGUGCA	ENSMUST00000075812.4|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human) 	ENSMUST00000114397.2|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human) 	ENSMUST00000155880.1|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human)
mm10_v2_chr19_-_29648355_29648425	0.0264453	CAGUGCA	ENSMUST00000159692.1|Ermp1|ENSMUSG00000046324.6|endoplasmic reticulum metallopeptidase 1
mm10_v2_chr12_+_76370266_76370266	0.0258621	CAGUGCA	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr7_-_80688852_80688923	0.0257517	CAGUGCA	ENSMUST00000122255.1|Crtc3|ENSMUSG00000030527.9|CREB regulated transcription coactivator 3
mm10_v2_chr10_+_128092771_128092819	0.0251702	CAGUGCA	ENSMUST00000170054.2|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A 	ENSMUST00000045621.8|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A
mm10_v2_chr8_-_84800024_84800283	0.0246104	CAGUGCA	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr12_-_81781121_81781176	0.0242297	CAGUGCA	ENSMUST00000035987.7|Map3k9|ENSMUSG00000042724.7|mitogen-activated protein kinase kinase kinase 9
mm10_v2_chr13_-_68999518_68999565	0.0238741	CAGUGCA	ENSMUST00000022013.7|Adcy2|ENSMUSG00000021536.7|adenylate cyclase 2
mm10_v2_chrX_-_108834303_108834381	0.0209002	CAGUGCA	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr13_-_98815408_98815449	0.0185768	CAGUGCA	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr11_-_28584260_28584324	0.0180896	CAGUGCA	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr6_-_71440623_71440645	0.0167179	CAGUGCA	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr16_-_8792302_8792326	0.0152204	CAGUGCA	ENSMUST00000160405.1|Usp7|ENSMUSG00000022710.11|ubiquitin specific peptidase 7
mm10_v2_chr1_+_171329015_171329145	0.0151516	CAGUGCA	ENSMUST00000111300.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr13_+_55693082_55693151	0.014896	CAGUGCA	ENSMUST00000057844.8|B230219D22Rik|ENSMUSG00000045767.8|RIKEN cDNA B230219D22 gene
mm10_v2_chr17_+_43389436_43389497	0.0142886	CAGUGCA	ENSMUST00000113599.1|Gpr116|ENSMUSG00000056492.5|G protein-coupled receptor 116
mm10_v2_chr13_+_42052015_42052072	0.0139663	CAGUGCA	ENSMUST00000060148.5|Hivep1|ENSMUSG00000021366.7|human immunodeficiency virus type I enhancer binding protein 1
mm10_v2_chr19_-_44069736_44069787	0.0137704	CAGUGCA	ENSMUST00000172041.1|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000071698.6|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000112028.3|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1
mm10_v2_chr1_-_133753681_133753857	0.0135519	CAGUGCA	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr11_-_95309557_95309602	0.0123694	CAGUGCA	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr12_-_31499541_31499616	0.012041	CAGUGCA	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr2_+_20737306_20737321	0.0118508	CAGUGCA	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr13_-_21440901_21441069	0.011687	CAGUGCA	ENSMUST00000122872.1|Pgbd1|ENSMUSG00000055313.8|piggyBac transposable element derived 1 	ENSMUST00000151743.1|Pgbd1|ENSMUSG00000055313.8|piggyBac transposable element derived 1 	ENSMUST00000148071.1|Pgbd1|ENSMUSG00000055313.8|piggyBac transposable element derived 1
mm10_v2_chr3_+_96557950_96557968	0.00991473	CAGUGCA	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr2_-_167349167_167349249	0.00960827	CAGUGCA	ENSMUST00000109221.2|B4galt5|ENSMUSG00000017929.7|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm10_v2_chr1_+_105663855_105663866	0.00930318	CAGUGCA	ENSMUST00000086721.3|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene 	ENSMUST00000039173.6|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene
mm10_v2_chr2_-_60125651_60125775	0.00919987	CAGUGCA	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr9_+_58629102_58629110	0.0091653	CAGUGCA	ENSMUST00000176250.1|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr17_-_33718591_33718690	0.00819481	CAGUGCA	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr13_-_93192270_93192328	0.00803721	CAGUGCA	ENSMUST00000048702.5|Papd4|ENSMUSG00000042167.5|PAP associated domain containing 4
mm10_v2_chr16_-_18289199_18289260	0.0077818	CAGUGCA	ENSMUST00000009321.4|Dgcr8|ENSMUSG00000022718.5|DiGeorge syndrome critical region gene 8 	ENSMUST00000115633.1|Dgcr8|ENSMUSG00000022718.5|DiGeorge syndrome critical region gene 8
mm10_v2_chr5_+_144100387_144100436	0.00763696	CAGUGCA	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr1_+_58973521_58973582	0.00660211	CAGUGCA	ENSMUST00000114296.1|Stradb|ENSMUSG00000026027.7|STE20-related kinase adaptor beta 	ENSMUST00000027185.4|Stradb|ENSMUSG00000026027.7|STE20-related kinase adaptor beta
mm10_v2_chr2_+_167932327_167932379	0.00622905	CAGUGCA	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr10_-_111010001_111010066	0.00614281	CAGUGCA	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr5_+_123907175_123907292	0.00568887	CAGUGCA	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr11_-_4746778_4746778	0.00377184	CAGUGCA	ENSMUST00000009219.2|Cabp7|ENSMUSG00000009075.2|calcium binding protein 7
mm10_v2_chr12_-_4477138_4477196	0.00240392	CAGUGCA	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chr17_+_75005523_75005568	0.00202595	CAGUGCA	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr12_-_69681795_69681869	0.00176633	CAGUGCA	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chrX_-_53370470_53370502	0.0017042	CAGUGCA	ENSMUST00000096447.2|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1 	ENSMUST00000023836.3|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1
mm10_v2_chr10_+_67537861_67537930	0.00147145	CAGUGCA	ENSMUST00000048289.7|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000105438.2|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000130933.1|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000146986.1|Egr2|ENSMUSG00000037868.9|early growth response 2
mm10_v2_chr9_-_52168111_52168111	0.00134693	CAGUGCA	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr12_-_100725028_100725081	0.000679445	CAGUGCA	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
