mm10_v2_chr5_+_120649188_120649259	1.4796	Ctcfl_Ctcf	ENSMUST00000156722.1|Rasal1|ENSMUSG00000029602.5|RAS protein activator like 1 (GAP1 like)
mm10_v2_chr15_-_102350692_102350771	1.09911	Ctcfl_Ctcf	ENSMUST00000041208.7|Aaas|ENSMUSG00000036678.7|achalasia, adrenocortical insufficiency, alacrimia
mm10_v2_chr19_-_10240689_10240751	0.885319	Ctcfl_Ctcf	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr2_-_32353247_32353282	0.825936	Ctcfl_Ctcf	ENSMUST00000078352.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113352.2|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113365.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr1_+_172482199_172482314	0.802875	Ctcfl_Ctcf	ENSMUST00000135267.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000052629.6|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000111235.2|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr1_+_172481788_172481819	0.79114	Ctcfl_Ctcf	ENSMUST00000127052.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr2_-_32353283_32353311	0.763988	Ctcfl_Ctcf	ENSMUST00000091089.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113350.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr2_+_65620829_65620857	0.670442	Ctcfl_Ctcf	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr2_-_65567505_65567627	0.65658	Ctcfl_Ctcf	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr7_-_109170308_109170308	0.644183	Ctcfl_Ctcf	ENSMUST00000036992.7|Lmo1|ENSMUSG00000036111.7|LIM domain only 1
mm10_v2_chr2_-_166155272_166155286	0.636457	Ctcfl_Ctcf	ENSMUST00000088086.3|Sulf2|ENSMUSG00000006800.7|sulfatase 2
mm10_v2_chr2_-_65567465_65567495	0.629826	Ctcfl_Ctcf	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr6_-_87335758_87335775	0.62255	Ctcfl_Ctcf	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr7_+_16309577_16309641	0.606937	Ctcfl_Ctcf	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr2_+_38931975_38932007	0.591265	Ctcfl_Ctcf	ENSMUST00000057279.5|Olfml2a|ENSMUSG00000046618.7|olfactomedin-like 2A
mm10_v2_chr2_+_29619692_29619825	0.564795	Ctcfl_Ctcf	ENSMUST00000095087.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000091146.5|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000102872.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr7_-_45136056_45136081	0.543412	Ctcfl_Ctcf	ENSMUST00000130628.1|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr4_+_122995944_122995958	0.537887	Ctcfl_Ctcf	ENSMUST00000106252.2|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr3_-_84155762_84155796	0.531527	Ctcfl_Ctcf	ENSMUST00000047368.6|Mnd1|ENSMUSG00000033752.6|meiotic nuclear divisions 1 homolog (S. cerevisiae)
mm10_v2_chr2_+_19344820_19344937	0.530584	Ctcfl_Ctcf	ENSMUST00000150514.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene 	ENSMUST00000136456.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene
mm10_v2_chr3_+_108537523_108537583	0.52523	Ctcfl_Ctcf	ENSMUST00000029485.5|1700013F07Rik|ENSMUSG00000027886.7|RIKEN cDNA 1700013F07 gene
mm10_v2_chr18_+_37411674_37411674	0.495102	Ctcfl_Ctcf	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr1_-_38129618_38129679	0.476258	Ctcfl_Ctcf	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr6_+_124570294_124570315	0.457871	Ctcfl_Ctcf	ENSMUST00000184647.1|C1rb|ENSMUSG00000098470.1|complement component 1, r subcomponent B
mm10_v2_chr2_-_91963507_91963694	0.457059	Ctcfl_Ctcf	ENSMUST00000028667.3|Dgkz|ENSMUSG00000040479.5|diacylglycerol kinase zeta
mm10_v2_chr16_-_30550560_30550594	0.44672	Ctcfl_Ctcf	ENSMUST00000140402.1|Tmem44|ENSMUSG00000022537.11|transmembrane protein 44
mm10_v2_chr4_-_137796350_137796384	0.445848	Ctcfl_Ctcf	ENSMUST00000030551.4|Alpl|ENSMUSG00000028766.4|alkaline phosphatase, liver/bone/kidney
mm10_v2_chr14_+_8080315_8080385	0.437834	Ctcfl_Ctcf	ENSMUST00000023924.3|Rpp14|ENSMUSG00000023156.3|ribonuclease P 14 subunit
mm10_v2_chr2_-_153015331_153015427	0.430833	Ctcfl_Ctcf	ENSMUST00000028972.8|Pdrg1|ENSMUSG00000027472.8|p53 and DNA damage regulated 1
mm10_v2_chr7_-_45434590_45434709	0.430484	Ctcfl_Ctcf	ENSMUST00000107771.3|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2 	ENSMUST00000141761.1|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2
mm10_v2_chr8_-_13254154_13254168	0.428042	Ctcfl_Ctcf	ENSMUST00000033825.4|Adprhl1|ENSMUSG00000031448.6|ADP-ribosylhydrolase like 1
mm10_v2_chr7_-_84086494_84086509	0.414274	Ctcfl_Ctcf	ENSMUST00000064174.5|9930013L23Rik|ENSMUSG00000052353.7|RIKEN cDNA 9930013L23 gene
mm10_v2_chr5_+_135806859_135806902	0.409226	Ctcfl_Ctcf	ENSMUST00000126232.1|Srrm3|ENSMUSG00000039860.13|serine/arginine repetitive matrix 3
mm10_v2_chr2_-_117342709_117342822	0.407125	Ctcfl_Ctcf	ENSMUST00000173541.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000172901.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000173252.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr15_-_98807910_98807932	0.400113	Ctcfl_Ctcf	ENSMUST00000075444.6|Ddn|ENSMUSG00000059213.6|dendrin
mm10_v2_chr19_-_6921753_6921803	0.395706	Ctcfl_Ctcf	ENSMUST00000173635.1|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr9_-_108452377_108452412	0.394758	Ctcfl_Ctcf	ENSMUST00000035232.7|Klhdc8b|ENSMUSG00000032609.7|kelch domain containing 8B
mm10_v2_chr17_+_34135182_34135182	0.394557	Ctcfl_Ctcf	ENSMUST00000042121.9|H2-DMa|ENSMUSG00000037649.9|histocompatibility 2, class II, locus DMa
mm10_v2_chr7_+_16310412_16310455	0.391025	Ctcfl_Ctcf	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr4_-_116167591_116167607	0.389394	Ctcfl_Ctcf	ENSMUST00000030465.3|Tspan1|ENSMUSG00000028699.3|tetraspanin 1 	ENSMUST00000143426.1|Tspan1|ENSMUSG00000028699.3|tetraspanin 1
mm10_v2_chr14_+_33319703_33319744	0.367271	Ctcfl_Ctcf	ENSMUST00000111955.1|Arhgap22|ENSMUSG00000063506.7|Rho GTPase activating protein 22
mm10_v2_chr10_+_127165118_127165225	0.355026	Ctcfl_Ctcf	ENSMUST00000006914.9|B4galnt1|ENSMUSG00000006731.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm10_v2_chr11_+_78826575_78826618	0.339916	Ctcfl_Ctcf	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr4_-_138913915_138913983	0.337546	Ctcfl_Ctcf	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr2_-_178407583_178407685	0.333074	Ctcfl_Ctcf	ENSMUST00000081134.3|Sycp2|ENSMUSG00000060445.5|synaptonemal complex protein 2
mm10_v2_chr11_-_3914664_3914664	0.33271	Ctcfl_Ctcf	ENSMUST00000109995.1|Slc35e4|ENSMUSG00000048807.2|solute carrier family 35, member E4 	ENSMUST00000051207.1|Slc35e4|ENSMUSG00000048807.2|solute carrier family 35, member E4
mm10_v2_chr11_+_116671658_116671708	0.331097	Ctcfl_Ctcf	ENSMUST00000106378.1|1810032O08Rik|ENSMUSG00000020812.11|RIKEN cDNA 1810032O08 gene 	ENSMUST00000144049.1|1810032O08Rik|ENSMUSG00000020812.11|RIKEN cDNA 1810032O08 gene
mm10_v2_chrX_-_133898292_133898377	0.327581	Ctcfl_Ctcf	ENSMUST00000176718.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6 	ENSMUST00000176641.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr5_-_142550965_142551110	0.323222	Ctcfl_Ctcf	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr6_-_89362581_89362637	0.321303	Ctcfl_Ctcf	ENSMUST00000163139.1|Plxna1|ENSMUSG00000030084.5|plexin A1
mm10_v2_chr8_-_13254068_13254085	0.319603	Ctcfl_Ctcf	ENSMUST00000168498.1|Adprhl1|ENSMUSG00000031448.6|ADP-ribosylhydrolase like 1
mm10_v2_chr8_-_84937347_84937367	0.315811	Ctcfl_Ctcf	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr4_+_151933691_151933715	0.31496	Ctcfl_Ctcf	ENSMUST00000062904.4|Dnajc11|ENSMUSG00000039768.10|DnaJ (Hsp40) homolog, subfamily C, member 11
mm10_v2_chr7_+_49778334_49778389	0.314211	Ctcfl_Ctcf	ENSMUST00000140656.1|Prmt3|ENSMUSG00000030505.10|protein arginine N-methyltransferase 3 	ENSMUST00000032715.6|Prmt3|ENSMUSG00000030505.10|protein arginine N-methyltransferase 3
mm10_v2_chr7_-_141437829_141437892	0.311296	Ctcfl_Ctcf	ENSMUST00000019226.7|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr2_-_118373347_118373419	0.310892	Ctcfl_Ctcf	ENSMUST00000039160.2|Gpr176|ENSMUSG00000040133.2|G protein-coupled receptor 176
mm10_v2_chr2_-_51149100_51149115	0.308716	Ctcfl_Ctcf	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr7_-_141437587_141437650	0.308561	Ctcfl_Ctcf	ENSMUST00000172654.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106006.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr7_+_127800604_127800696	0.305593	Ctcfl_Ctcf	ENSMUST00000046863.5|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000106272.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000139068.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr17_+_26917091_26917107	0.305221	Ctcfl_Ctcf	ENSMUST00000078961.4|Kifc5b|ENSMUSG00000024301.9|kinesin family member C5B
mm10_v2_chr3_-_89160155_89160202	0.295356	Ctcfl_Ctcf	ENSMUST00000029686.3|Hcn3|ENSMUSG00000028051.4|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm10_v2_chr13_-_119488334_119488389	0.293455	Ctcfl_Ctcf	ENSMUST00000099148.2|3110070M22Rik|ENSMUSG00000074635.2|RIKEN cDNA 3110070M22 gene
mm10_v2_chr10_+_80148263_80148279	0.289822	Ctcfl_Ctcf	ENSMUST00000099492.3|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000042057.5|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr2_-_26640230_26640249	0.289236	Ctcfl_Ctcf	ENSMUST00000181621.1|Snhg7|ENSMUSG00000097052.1|small nucleolar RNA host gene (non-protein coding) 7 	ENSMUST00000180659.1|Snhg7|ENSMUSG00000097052.1|small nucleolar RNA host gene (non-protein coding) 7
mm10_v2_chr7_-_45136231_45136340	0.286785	Ctcfl_Ctcf	ENSMUST00000124300.1|Rpl13a|ENSMUSG00000074129.6|ribosomal protein L13A 	ENSMUST00000085377.5|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr12_-_102704896_102704980	0.286382	Ctcfl_Ctcf	ENSMUST00000178697.1|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase 	ENSMUST00000046518.5|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase
mm10_v2_chr14_+_62555737_62555812	0.283683	Ctcfl_Ctcf	ENSMUST00000039064.7|Fam124a|ENSMUSG00000035184.9|family with sequence similarity 124, member A
mm10_v2_chr8_-_107425029_107425056	0.283511	Ctcfl_Ctcf	ENSMUST00000003946.8|Nob1|ENSMUSG00000003848.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm10_v2_chr16_+_35541275_35541362	0.28119	Ctcfl_Ctcf	ENSMUST00000120756.1|Sema5b|ENSMUSG00000052133.10|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
mm10_v2_chr2_-_166155624_166155671	0.280702	Ctcfl_Ctcf	ENSMUST00000109249.2|Sulf2|ENSMUSG00000006800.7|sulfatase 2
mm10_v2_chr5_-_137741102_137741185	0.280587	Ctcfl_Ctcf	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr7_+_4925802_4925868	0.278956	Ctcfl_Ctcf	ENSMUST00000057612.7|Ssc5d|ENSMUSG00000035279.7|scavenger receptor cysteine rich domain containing (5 domains)
mm10_v2_chr4_+_152039315_152039356	0.275374	Ctcfl_Ctcf	ENSMUST00000084116.6|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000105663.1|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000103197.3|Nol9|ENSMUSG00000028948.10|nucleolar protein 9
mm10_v2_chr12_+_80518990_80519087	0.27475	Ctcfl_Ctcf	ENSMUST00000021558.6|Galnt16|ENSMUSG00000021130.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
mm10_v2_chr7_-_139616309_139616329	0.272132	Ctcfl_Ctcf	ENSMUST00000166503.1|E030019B06Rik|ENSMUSG00000070357.5|RIKEN cDNA E030019B06 gene 	ENSMUST00000093991.3|E030019B06Rik|ENSMUSG00000070357.5|RIKEN cDNA E030019B06 gene
mm10_v2_chr9_+_106477269_106477352	0.269884	Ctcfl_Ctcf	ENSMUST00000047721.8|Rrp9|ENSMUSG00000041506.8|RRP9, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr5_-_135078224_135078266	0.264323	Ctcfl_Ctcf	ENSMUST00000067935.4|Vps37d|ENSMUSG00000043614.7|vacuolar protein sorting 37D (yeast) 	ENSMUST00000076203.2|Vps37d|ENSMUSG00000043614.7|vacuolar protein sorting 37D (yeast)
mm10_v2_chr9_-_44234014_44234046	0.26296	Ctcfl_Ctcf	ENSMUST00000037644.6|Cbl|ENSMUSG00000034342.8|Casitas B-lineage lymphoma
mm10_v2_chr17_-_7827289_7827310	0.261361	Ctcfl_Ctcf	ENSMUST00000167580.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1 	ENSMUST00000169126.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1
mm10_v2_chr19_-_10869757_10869940	0.260397	Ctcfl_Ctcf	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr2_-_122369130_122369162	0.256071	Ctcfl_Ctcf	ENSMUST00000151130.1|Shf|ENSMUSG00000033256.8|Src homology 2 domain containing F 	ENSMUST00000125826.1|Shf|ENSMUSG00000033256.8|Src homology 2 domain containing F
mm10_v2_chr7_+_127800844_127800941	0.25493	Ctcfl_Ctcf	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr19_-_6921804_6921834	0.25336	Ctcfl_Ctcf	ENSMUST00000025906.4|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr9_+_111311674_111311758	0.249606	Ctcfl_Ctcf	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr9_+_44773191_44773263	0.249447	Ctcfl_Ctcf	ENSMUST00000147559.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr7_-_67759735_67759759	0.249414	Ctcfl_Ctcf	ENSMUST00000074233.4|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein 	ENSMUST00000051389.8|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein
mm10_v2_chr19_-_4439388_4439450	0.249165	Ctcfl_Ctcf	ENSMUST00000117462.1|Rhod|ENSMUSG00000041845.4|ras homolog gene family, member D 	ENSMUST00000048197.3|Rhod|ENSMUSG00000041845.4|ras homolog gene family, member D
mm10_v2_chr4_-_129121234_129121315	0.242915	Ctcfl_Ctcf	ENSMUST00000030572.3|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr19_-_57360668_57360793	0.240181	Ctcfl_Ctcf	ENSMUST00000181921.1|B230217O12Rik|ENSMUSG00000097785.1|RIKEN cDNA B230217O12 gene
mm10_v2_chr17_-_33890584_33890661	0.240102	Ctcfl_Ctcf	ENSMUST00000114361.2|Kifc1|ENSMUSG00000079553.4|kinesin family member C1 	ENSMUST00000173492.1|Kifc1|ENSMUSG00000079553.4|kinesin family member C1
mm10_v2_chr2_-_54085542_54085559	0.240096	Ctcfl_Ctcf	ENSMUST00000100089.2|Rprm|ENSMUSG00000075334.2|reprimo, TP53 dependent G2 arrest mediator candidate
mm10_v2_chr2_-_11502090_11502126	0.239735	Ctcfl_Ctcf	ENSMUST00000179584.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000170196.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000171188.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114845.3|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114844.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000100411.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr2_-_154613425_154613444	0.236104	Ctcfl_Ctcf	ENSMUST00000181369.1|4930519P11Rik|ENSMUSG00000097602.1|RIKEN cDNA 4930519P11 gene
mm10_v2_chr11_-_94549165_94549222	0.235708	Ctcfl_Ctcf	ENSMUST00000040487.3|Rsad1|ENSMUSG00000039096.4|radical S-adenosyl methionine domain containing 1
mm10_v2_chr5_-_143138200_143138200	0.232082	Ctcfl_Ctcf	ENSMUST00000164536.2|Olfr718-ps1|ENSMUSG00000090981.2|olfactory receptor 718, pseudogene 1
mm10_v2_chr6_+_85915787_85915798	0.231026	Ctcfl_Ctcf	ENSMUST00000149026.1|Tprkb|ENSMUSG00000054226.7|Tp53rk binding protein
mm10_v2_chr5_+_23850590_23850607	0.230994	Ctcfl_Ctcf	ENSMUST00000181574.1|2700038G22Rik|ENSMUSG00000097180.1|RIKEN cDNA 2700038G22 gene
mm10_v2_chr19_-_12501996_12502152	0.227441	Ctcfl_Ctcf	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr18_+_4921662_4921726	0.226531	Ctcfl_Ctcf	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr6_-_137169710_137169732	0.226277	Ctcfl_Ctcf	ENSMUST00000117919.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr2_-_11502067_11502080	0.225585	Ctcfl_Ctcf	ENSMUST00000028114.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000049849.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr3_-_95217741_95217765	0.22558	Ctcfl_Ctcf	ENSMUST00000107204.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr7_+_122159422_122159501	0.223051	Ctcfl_Ctcf	ENSMUST00000033154.6|Plk1|ENSMUSG00000030867.6|polo-like kinase 1
mm10_v2_chr13_+_119487941_119488124	0.223039	Ctcfl_Ctcf	ENSMUST00000176171.1|Gm7120|ENSMUSG00000074634.5|predicted gene 7120 	ENSMUST00000177361.1|Gm7120|ENSMUSG00000074634.5|predicted gene 7120
mm10_v2_chr5_-_143315360_143315396	0.220142	Ctcfl_Ctcf	ENSMUST00000046418.2|E130309D02Rik|ENSMUSG00000039244.4|RIKEN cDNA E130309D02 gene
mm10_v2_chr10_-_31445921_31445967	0.214728	Ctcfl_Ctcf	ENSMUST00000000305.5|Tpd52l1|ENSMUSG00000000296.7|tumor protein D52-like 1
mm10_v2_chr19_+_44989073_44989101	0.213632	Ctcfl_Ctcf	ENSMUST00000026225.8|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr8_+_66697404_66697428	0.211948	Ctcfl_Ctcf	ENSMUST00000039303.5|Npy1r|ENSMUSG00000036437.5|neuropeptide Y receptor Y1
mm10_v2_chr4_+_63215402_63215435	0.210974	Ctcfl_Ctcf	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr19_-_38819156_38819242	0.210013	Ctcfl_Ctcf	ENSMUST00000025963.7|Noc3l|ENSMUSG00000024999.7|nucleolar complex associated 3 homolog (S. cerevisiae)
mm10_v2_chr10_-_127030813_127030840	0.209979	Ctcfl_Ctcf	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr2_-_66410064_66410134	0.208627	Ctcfl_Ctcf	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr9_+_65101453_65101535	0.206872	Ctcfl_Ctcf	ENSMUST00000077696.6|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000035499.4|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000166273.1|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4
mm10_v2_chr8_+_116943387_116943424	0.199591	Ctcfl_Ctcf	ENSMUST00000109099.3|Atmin|ENSMUSG00000047388.10|ATM interactor
mm10_v2_chr14_-_55758458_55758489	0.198062	Ctcfl_Ctcf	ENSMUST00000001497.7|Cideb|ENSMUSG00000022219.9|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm10_v2_chr17_+_34204080_34204080	0.197907	Ctcfl_Ctcf	ENSMUST00000138491.1|Tap2|ENSMUSG00000024339.6|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr18_+_73863672_73863713	0.197332	Ctcfl_Ctcf	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr10_-_127030789_127030812	0.197303	Ctcfl_Ctcf	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr13_-_49147931_49148037	0.196928	Ctcfl_Ctcf	ENSMUST00000162581.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110097.2|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000049265.8|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000035538.6|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110096.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000091623.3|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2
mm10_v2_chr19_+_53329413_53329478	0.196661	Ctcfl_Ctcf	ENSMUST00000025998.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr2_+_71055731_71055852	0.194833	Ctcfl_Ctcf	ENSMUST00000154704.1|Dcaf17|ENSMUSG00000041966.12|DDB1 and CUL4 associated factor 17 	ENSMUST00000135357.1|Dcaf17|ENSMUSG00000041966.12|DDB1 and CUL4 associated factor 17 	ENSMUST00000064141.5|Dcaf17|ENSMUSG00000041966.12|DDB1 and CUL4 associated factor 17 	ENSMUST00000112159.2|Dcaf17|ENSMUSG00000041966.12|DDB1 and CUL4 associated factor 17 	ENSMUST00000102701.3|Dcaf17|ENSMUSG00000041966.12|DDB1 and CUL4 associated factor 17
mm10_v2_chr11_-_115322025_115322064	0.194222	Ctcfl_Ctcf	ENSMUST00000103037.4|Ush1g|ENSMUSG00000045288.10|Usher syndrome 1G
mm10_v2_chr7_+_120917744_120917815	0.193929	Ctcfl_Ctcf	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr11_-_75169519_75169519	0.193599	Ctcfl_Ctcf	ENSMUST00000055619.4|Hic1|ENSMUSG00000043099.4|hypermethylated in cancer 1
mm10_v2_chr2_-_11502025_11502049	0.192963	Ctcfl_Ctcf	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr8_-_105484350_105484350	0.191317	Ctcfl_Ctcf	ENSMUST00000044286.5|Zdhhc1|ENSMUSG00000039199.5|zinc finger, DHHC domain containing 1
mm10_v2_chr19_-_10304867_10304954	0.190343	Ctcfl_Ctcf	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr19_+_18670780_18670810	0.185695	Ctcfl_Ctcf	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr10_-_117710745_117710773	0.185352	Ctcfl_Ctcf	ENSMUST00000020408.8|Mdm2|ENSMUSG00000020184.8|transformed mouse 3T3 cell double minute 2 	ENSMUST00000105263.1|Mdm2|ENSMUSG00000020184.8|transformed mouse 3T3 cell double minute 2
mm10_v2_chr3_-_97610156_97610222	0.184953	Ctcfl_Ctcf	ENSMUST00000029730.4|Chd1l|ENSMUSG00000028089.4|chromodomain helicase DNA binding protein 1-like
mm10_v2_chr5_+_151368683_151368723	0.184403	Ctcfl_Ctcf	ENSMUST00000181114.1|1700028E10Rik|ENSMUSG00000097321.1|RIKEN cDNA 1700028E10 gene 	ENSMUST00000181555.1|1700028E10Rik|ENSMUSG00000097321.1|RIKEN cDNA 1700028E10 gene
mm10_v2_chr15_-_89196457_89196478	0.182222	Ctcfl_Ctcf	ENSMUST00000078953.7|Dennd6b|ENSMUSG00000015377.9|DENN/MADD domain containing 6B
mm10_v2_chr11_-_97573929_97574022	0.180774	Ctcfl_Ctcf	ENSMUST00000126287.1|Srcin1|ENSMUSG00000038453.9|SRC kinase signaling inhibitor 1 	ENSMUST00000107590.1|Srcin1|ENSMUSG00000038453.9|SRC kinase signaling inhibitor 1
mm10_v2_chr8_+_119446719_119446766	0.179706	Ctcfl_Ctcf	ENSMUST00000098363.3|Necab2|ENSMUSG00000031837.7|N-terminal EF-hand calcium binding protein 2
mm10_v2_chr2_+_150749036_150749147	0.178531	Ctcfl_Ctcf	ENSMUST00000094467.5|Entpd6|ENSMUSG00000033068.10|ectonucleoside triphosphate diphosphohydrolase 6
mm10_v2_chr11_-_70982987_70983026	0.176021	Ctcfl_Ctcf	ENSMUST00000078528.6|C1qbp|ENSMUSG00000018446.8|complement component 1, q subcomponent binding protein
mm10_v2_chr4_+_140701466_140701509	0.175162	Ctcfl_Ctcf	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr4_-_131838231_131838291	0.1751	Ctcfl_Ctcf	ENSMUST00000030741.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U 	ENSMUST00000105987.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U
mm10_v2_chr15_+_76368884_76368936	0.174159	Ctcfl_Ctcf	ENSMUST00000023213.6|Fam203a|ENSMUSG00000022554.6|family with sequence similarity 203, member A
mm10_v2_chr15_-_89373810_89373829	0.172632	Ctcfl_Ctcf	ENSMUST00000167643.2|Sco2|ENSMUSG00000091780.2|SCO cytochrome oxidase deficient homolog 2 (yeast)
mm10_v2_chr2_-_152831665_152831735	0.169734	Ctcfl_Ctcf	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr16_+_96467606_96467725	0.168182	Ctcfl_Ctcf	ENSMUST00000061739.8|Pcp4|ENSMUSG00000090223.1|Purkinje cell protein 4
mm10_v2_chr18_+_37421418_37421455	0.167729	Ctcfl_Ctcf	ENSMUST00000053073.4|Pcdhb11|ENSMUSG00000051486.4|protocadherin beta 11
mm10_v2_chr4_-_6990774_6990823	0.167444	Ctcfl_Ctcf	ENSMUST00000039987.3|Tox|ENSMUSG00000041272.5|thymocyte selection-associated high mobility group box
mm10_v2_chr1_-_16520020_16520039	0.16734	Ctcfl_Ctcf	ENSMUST00000144138.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000145092.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr3_-_154597045_154597104	0.163687	Ctcfl_Ctcf	ENSMUST00000052774.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 	ENSMUST00000170461.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 	ENSMUST00000122976.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
mm10_v2_chr12_-_101028983_101029042	0.161325	Ctcfl_Ctcf	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr11_-_45944910_45944960	0.161164	Ctcfl_Ctcf	ENSMUST00000129820.1|Lsm11|ENSMUSG00000044847.7|U7 snRNP-specific Sm-like protein LSM11
mm10_v2_chr10_+_79793553_79793621	0.160068	Ctcfl_Ctcf	ENSMUST00000046945.6|Palm|ENSMUSG00000035863.7|paralemmin 	ENSMUST00000105379.2|Palm|ENSMUSG00000035863.7|paralemmin
mm10_v2_chr2_+_167538192_167538210	0.159797	Ctcfl_Ctcf	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr2_+_28513105_28513126	0.159706	Ctcfl_Ctcf	ENSMUST00000135803.1|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr2_-_71055534_71055611	0.158518	Ctcfl_Ctcf	ENSMUST00000090849.5|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000100037.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000112186.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8
mm10_v2_chr6_+_124512615_124512640	0.157216	Ctcfl_Ctcf	ENSMUST00000068593.7|C1ra|ENSMUSG00000055172.9|complement component 1, r subcomponent A
mm10_v2_chr3_+_133310093_133310145	0.156774	Ctcfl_Ctcf	ENSMUST00000029644.9|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000122334.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chr15_+_74709161_74709161	0.156155	Ctcfl_Ctcf	ENSMUST00000056711.1|4933427E11Rik|ENSMUSG00000044276.1|RIKEN cDNA 4933427E11 gene
mm10_v2_chr2_-_152831112_152831326	0.155629	Ctcfl_Ctcf	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr15_-_76817970_76818174	0.155496	Ctcfl_Ctcf	ENSMUST00000175843.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000177026.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176736.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000036176.8|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176219.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000077821.3|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39
mm10_v2_chr7_-_127935429_127935450	0.154707	Ctcfl_Ctcf	ENSMUST00000141385.1|Prss36|ENSMUSG00000070371.5|protease, serine, 36 	ENSMUST00000156152.1|Prss36|ENSMUSG00000070371.5|protease, serine, 36
mm10_v2_chr1_+_90203980_90204012	0.153978	Ctcfl_Ctcf	ENSMUST00000065587.4|Ackr3|ENSMUSG00000044337.5|atypical chemokine receptor 3 	ENSMUST00000159654.1|Ackr3|ENSMUSG00000044337.5|atypical chemokine receptor 3
mm10_v2_chrX_+_159532674_159532748	0.152634	Ctcfl_Ctcf	ENSMUST00000057180.6|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chr11_-_101175440_101175444	0.151944	Ctcfl_Ctcf	ENSMUST00000062759.3|Ccr10|ENSMUSG00000044052.3|chemokine (C-C motif) receptor 10
mm10_v2_chr1_+_118321834_118321882	0.151326	Ctcfl_Ctcf	ENSMUST00000027626.6|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein 	ENSMUST00000112688.3|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein
mm10_v2_chr17_+_27685197_27685233	0.151091	Ctcfl_Ctcf	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr7_+_110627650_110627669	0.150262	Ctcfl_Ctcf	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr5_-_66618636_66618711	0.149569	Ctcfl_Ctcf	ENSMUST00000162382.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000160870.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000087256.5|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000160103.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000162349.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr16_-_14291355_14291408	0.149169	Ctcfl_Ctcf	ENSMUST00000090287.3|Myh11|ENSMUSG00000018830.8|myosin, heavy polypeptide 11, smooth muscle
mm10_v2_chr11_+_4135233_4135282	0.147634	Ctcfl_Ctcf	ENSMUST00000124670.1|Rnf215|ENSMUSG00000003581.8|ring finger protein 215
mm10_v2_chr10_+_3973086_3973157	0.147387	Ctcfl_Ctcf	ENSMUST00000117291.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000120585.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000043735.7|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm10_v2_chr4_-_45108038_45108128	0.147251	Ctcfl_Ctcf	ENSMUST00000107809.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107808.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107807.1|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107810.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast)
mm10_v2_chr2_+_3118407_3118476	0.14531	Ctcfl_Ctcf	ENSMUST00000091505.4|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr18_+_42511496_42511521	0.143586	Ctcfl_Ctcf	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr1_+_191575721_191575792	0.142704	Ctcfl_Ctcf	ENSMUST00000045450.5|Ints7|ENSMUSG00000037461.5|integrator complex subunit 7
mm10_v2_chr8_+_22192800_22192856	0.142441	Ctcfl_Ctcf	ENSMUST00000033866.8|Vps36|ENSMUSG00000031479.8|vacuolar protein sorting 36 (yeast)
mm10_v2_chr17_-_33890539_33890560	0.139965	Ctcfl_Ctcf	ENSMUST00000173386.1|Kifc1|ENSMUSG00000079553.4|kinesin family member C1
mm10_v2_chr9_-_109059711_109059771	0.139344	Ctcfl_Ctcf	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr16_-_20425881_20425986	0.139001	Ctcfl_Ctcf	ENSMUST00000077867.3|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr2_-_155514796_155514860	0.138591	Ctcfl_Ctcf	ENSMUST00000029131.4|Ggt7|ENSMUSG00000027603.9|gamma-glutamyltransferase 7
mm10_v2_chr5_-_49524764_49524805	0.137876	Ctcfl_Ctcf	ENSMUST00000172363.2|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr10_-_18546049_18546084	0.13757	Ctcfl_Ctcf	ENSMUST00000020000.5|Hebp2|ENSMUSG00000019853.5|heme binding protein 2
mm10_v2_chr13_-_35027077_35027099	0.136398	Ctcfl_Ctcf	ENSMUST00000170538.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000163280.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2
mm10_v2_chr8_-_13254096_13254119	0.135045	Ctcfl_Ctcf	ENSMUST00000171619.1|Adprhl1|ENSMUSG00000031448.6|ADP-ribosylhydrolase like 1
mm10_v2_chr7_+_31059342_31059382	0.134457	Ctcfl_Ctcf	ENSMUST00000039775.7|Lgi4|ENSMUSG00000036560.8|leucine-rich repeat LGI family, member 4
mm10_v2_chr15_+_100761741_100761797	0.13417	Ctcfl_Ctcf	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr17_-_26886175_26886248	0.133475	Ctcfl_Ctcf	ENSMUST00000108741.2|Gm17382|ENSMUSG00000078838.2|predicted gene, 17382
mm10_v2_chr9_+_118606687_118606751	0.133069	Ctcfl_Ctcf	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr5_-_130024280_130024381	0.132519	Ctcfl_Ctcf	ENSMUST00000161640.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161884.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161094.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase
mm10_v2_chr18_-_36515798_36515812	0.131956	Ctcfl_Ctcf	ENSMUST00000025363.5|Hbegf|ENSMUSG00000024486.5|heparin-binding EGF-like growth factor
mm10_v2_chr17_+_56613392_56613425	0.131951	Ctcfl_Ctcf	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr14_+_57999305_57999338	0.13137	Ctcfl_Ctcf	ENSMUST00000180534.1|3110083C13Rik|ENSMUSG00000097303.1|RIKEN cDNA 3110083C13 gene
mm10_v2_chr7_-_15967470_15967567	0.131348	Ctcfl_Ctcf	ENSMUST00000144956.1|Ehd2|ENSMUSG00000074364.5|EH-domain containing 2 	ENSMUST00000098799.3|Ehd2|ENSMUSG00000074364.5|EH-domain containing 2
mm10_v2_chr5_+_137641334_137641437	0.131018	Ctcfl_Ctcf	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr10_-_80561528_80561560	0.130223	Ctcfl_Ctcf	ENSMUST00000057910.9|Rexo1|ENSMUSG00000047417.11|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm10_v2_chr11_+_84179852_84179863	0.129761	Ctcfl_Ctcf	ENSMUST00000136463.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha
mm10_v2_chr9_-_57645561_57645672	0.129149	Ctcfl_Ctcf	ENSMUST00000034863.6|Csk|ENSMUSG00000032312.6|c-src tyrosine kinase
mm10_v2_chr2_+_144599897_144600039	0.129148	Ctcfl_Ctcf	ENSMUST00000028917.6|Dtd1|ENSMUSG00000027430.6|D-tyrosyl-tRNA deacylase 1
mm10_v2_chrX_-_73786888_73786899	0.128539	Ctcfl_Ctcf	ENSMUST00000052761.8|Idh3g|ENSMUSG00000002010.11|isocitrate dehydrogenase 3 (NAD+), gamma
mm10_v2_chr16_+_16896469_16896598	0.127124	Ctcfl_Ctcf	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr16_+_17797282_17797325	0.126048	Ctcfl_Ctcf	ENSMUST00000012161.3|Scarf2|ENSMUSG00000012017.3|scavenger receptor class F, member 2
mm10_v2_chr16_+_16302955_16302987	0.125752	Ctcfl_Ctcf	ENSMUST00000159962.1|Yars2|ENSMUSG00000022792.10|tyrosyl-tRNA synthetase 2 (mitochondrial) 	ENSMUST00000059955.8|Yars2|ENSMUSG00000022792.10|tyrosyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr7_+_45434833_45434871	0.12518	Ctcfl_Ctcf	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chrX_-_102189371_102189394	0.12499	Ctcfl_Ctcf	ENSMUST00000033683.7|Rps4x|ENSMUSG00000031320.9|ribosomal protein S4, X-linked
mm10_v2_chr8_+_114439655_114439710	0.124607	Ctcfl_Ctcf	ENSMUST00000004756.7|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000109108.2|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000160862.1|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000109107.2|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase
mm10_v2_chr19_+_5877794_5877840	0.124585	Ctcfl_Ctcf	ENSMUST00000145200.1|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45 	ENSMUST00000025732.7|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45 	ENSMUST00000125114.1|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45 	ENSMUST00000155697.1|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45
mm10_v2_chr2_+_3118335_3118392	0.124085	Ctcfl_Ctcf	ENSMUST00000115099.2|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr11_+_50225315_50225429	0.123998	Ctcfl_Ctcf	ENSMUST00000041725.7|Mgat4b|ENSMUSG00000036620.8|mannoside acetylglucosaminyltransferase 4, isoenzyme B
mm10_v2_chr11_-_97574040_97574064	0.123925	Ctcfl_Ctcf	ENSMUST00000107593.1|Srcin1|ENSMUSG00000038453.9|SRC kinase signaling inhibitor 1
mm10_v2_chrX_+_94234594_94234604	0.121797	Ctcfl_Ctcf	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr10_-_128409632_128409874	0.121544	Ctcfl_Ctcf	ENSMUST00000172348.1|Nabp2|ENSMUSG00000025374.7|nucleic acid binding protein 2 	ENSMUST00000166608.1|Nabp2|ENSMUSG00000025374.7|nucleic acid binding protein 2 	ENSMUST00000164199.1|Nabp2|ENSMUSG00000025374.7|nucleic acid binding protein 2 	ENSMUST00000171370.1|Nabp2|ENSMUSG00000025374.7|nucleic acid binding protein 2 	ENSMUST00000026439.7|Nabp2|ENSMUSG00000025374.7|nucleic acid binding protein 2
mm10_v2_chr2_-_114175321_114175344	0.121537	Ctcfl_Ctcf	ENSMUST00000043160.6|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr5_-_110653348_110653422	0.120534	Ctcfl_Ctcf	ENSMUST00000042147.5|Noc4l|ENSMUSG00000033294.5|nucleolar complex associated 4 homolog (S. cerevisiae)
mm10_v2_chr14_-_52279238_52279339	0.120401	Ctcfl_Ctcf	ENSMUST00000167116.1|Rab2b|ENSMUSG00000022159.10|RAB2B, member RAS oncogene family 	ENSMUST00000100631.4|Rab2b|ENSMUSG00000022159.10|RAB2B, member RAS oncogene family
mm10_v2_chr2_+_25428699_25428715	0.118963	Ctcfl_Ctcf	ENSMUST00000102919.3|Abca2|ENSMUSG00000026944.12|ATP-binding cassette, sub-family A (ABC1), member 2
mm10_v2_chr19_-_16780822_16780835	0.118575	Ctcfl_Ctcf	ENSMUST00000068156.6|Vps13a|ENSMUSG00000046230.9|vacuolar protein sorting 13A (yeast)
mm10_v2_chr3_-_87768932_87768960	0.118551	Ctcfl_Ctcf	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr17_+_3114957_3114982	0.11769	Ctcfl_Ctcf	ENSMUST00000076734.6|Scaf8|ENSMUSG00000046201.8|SR-related CTD-associated factor 8
mm10_v2_chr5_-_36398090_36398149	0.11757	Ctcfl_Ctcf	ENSMUST00000037370.7|Sorcs2|ENSMUSG00000029093.8|sortilin-related VPS10 domain containing receptor 2 	ENSMUST00000070720.6|Sorcs2|ENSMUSG00000029093.8|sortilin-related VPS10 domain containing receptor 2
mm10_v2_chr18_+_37504264_37504296	0.115635	Ctcfl_Ctcf	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chrX_+_159988433_159988433	0.115116	Ctcfl_Ctcf	ENSMUST00000033665.8|Map3k15|ENSMUSG00000031303.8|mitogen-activated protein kinase kinase kinase 15
mm10_v2_chr7_+_64501687_64501706	0.11449	Ctcfl_Ctcf	ENSMUST00000032732.8|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr9_+_110333340_110333389	0.114392	Ctcfl_Ctcf	ENSMUST00000098350.3|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr8_+_83666827_83666882	0.114032	Ctcfl_Ctcf	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr11_-_107132114_107132166	0.113771	Ctcfl_Ctcf	ENSMUST00000106762.1|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor 	ENSMUST00000106763.1|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr17_+_25773769_25773778	0.112767	Ctcfl_Ctcf	ENSMUST00000134108.1|Narfl|ENSMUSG00000002280.4|nuclear prelamin A recognition factor-like 	ENSMUST00000002350.4|Narfl|ENSMUSG00000002280.4|nuclear prelamin A recognition factor-like
mm10_v2_chr11_+_62648656_62648685	0.112628	Ctcfl_Ctcf	ENSMUST00000062860.4|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2
mm10_v2_chr18_+_37307445_37307462	0.11253	Ctcfl_Ctcf	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr5_-_3596071_3596118	0.112358	Ctcfl_Ctcf	ENSMUST00000121877.1|Rbm48|ENSMUSG00000040302.11|RNA binding motif protein 48
mm10_v2_chr9_-_45906369_45906437	0.111988	Ctcfl_Ctcf	ENSMUST00000161187.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214
mm10_v2_chr18_+_36952621_36952766	0.111742	Ctcfl_Ctcf	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr9_-_56418023_56418052	0.111548	Ctcfl_Ctcf	ENSMUST00000061552.8|C230081A13Rik|ENSMUSG00000074305.3|RIKEN cDNA C230081A13 gene
mm10_v2_chrX_-_133898399_133898429	0.111461	Ctcfl_Ctcf	ENSMUST00000087557.5|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr11_-_113751309_113751327	0.111443	Ctcfl_Ctcf	ENSMUST00000106616.1|Cdc42ep4|ENSMUSG00000041598.7|CDC42 effector protein (Rho GTPase binding) 4
mm10_v2_chr13_+_94976435_94976452	0.111018	Ctcfl_Ctcf	ENSMUST00000160409.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000159647.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000167155.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41
mm10_v2_chr10_+_88379127_88379169	0.110548	Ctcfl_Ctcf	ENSMUST00000127615.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr7_+_25317067_25317164	0.110321	Ctcfl_Ctcf	ENSMUST00000128119.1|Megf8|ENSMUSG00000045039.9|multiple EGF-like-domains 8
mm10_v2_chr6_-_137169678_137169706	0.107402	Ctcfl_Ctcf	ENSMUST00000119610.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr1_+_194976342_194976391	0.107332	Ctcfl_Ctcf	ENSMUST00000181226.1|A330023F24Rik|ENSMUSG00000096929.1|RIKEN cDNA A330023F24 gene 	ENSMUST00000181947.1|A330023F24Rik|ENSMUSG00000096929.1|RIKEN cDNA A330023F24 gene
mm10_v2_chr2_-_114175274_114175293	0.105693	Ctcfl_Ctcf	ENSMUST00000102543.4|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr12_-_26415256_26415303	0.105496	Ctcfl_Ctcf	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chr10_+_80292453_80292645	0.105435	Ctcfl_Ctcf	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr7_+_66839726_66839750	0.10318	Ctcfl_Ctcf	ENSMUST00000098382.3|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr9_-_44268156_44268187	0.101906	Ctcfl_Ctcf	ENSMUST00000169651.1|Nlrx1|ENSMUSG00000032109.8|NLR family member X1
mm10_v2_chr1_-_133610215_133610249	0.101209	Ctcfl_Ctcf	ENSMUST00000164574.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E 	ENSMUST00000166291.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E 	ENSMUST00000164096.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E
mm10_v2_chr11_-_107131922_107131954	0.100925	Ctcfl_Ctcf	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr8_-_41417042_41417135	0.100376	Ctcfl_Ctcf	ENSMUST00000033999.6|Frg1|ENSMUSG00000031590.7|FSHD region gene 1
mm10_v2_chr7_+_45434876_45434889	0.100077	Ctcfl_Ctcf	ENSMUST00000107766.1|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr18_+_34777008_34777075	0.099524	Ctcfl_Ctcf	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr19_-_4283033_4283142	0.0993528	Ctcfl_Ctcf	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chr6_-_106800051_106800095	0.0991877	Ctcfl_Ctcf	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr15_-_100495239_100495267	0.0990585	Ctcfl_Ctcf	ENSMUST00000061457.5|Csrnp2|ENSMUSG00000044636.5|cysteine-serine-rich nuclear protein 2
mm10_v2_chr5_-_91402905_91402994	0.0989181	Ctcfl_Ctcf	ENSMUST00000121044.2|Btc|ENSMUSG00000082361.3|betacellulin, epidermal growth factor family member
mm10_v2_chr11_-_5444838_5444872	0.0978155	Ctcfl_Ctcf	ENSMUST00000109867.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3 	ENSMUST00000143746.2|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chrX_+_137049586_137049654	0.0977957	Ctcfl_Ctcf	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr10_-_80577285_80577327	0.0961734	Ctcfl_Ctcf	ENSMUST00000038558.8|Klf16|ENSMUSG00000035397.8|Kruppel-like factor 16
mm10_v2_chr11_-_82890541_82890626	0.0956733	Ctcfl_Ctcf	ENSMUST00000092844.6|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000021033.9|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000018985.8|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D
mm10_v2_chr10_+_84622365_84622437	0.0955774	Ctcfl_Ctcf	ENSMUST00000077175.5|Polr3b|ENSMUSG00000034453.7|polymerase (RNA) III (DNA directed) polypeptide B
mm10_v2_chr16_-_94313556_94313577	0.0951079	Ctcfl_Ctcf	ENSMUST00000163193.1|Hlcs|ENSMUSG00000040820.9|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm10_v2_chr6_-_85137743_85137781	0.0949258	Ctcfl_Ctcf	ENSMUST00000174769.1|Spr|ENSMUSG00000033735.7|sepiapterin reductase 	ENSMUST00000174286.1|Spr|ENSMUSG00000033735.7|sepiapterin reductase 	ENSMUST00000045986.7|Spr|ENSMUSG00000033735.7|sepiapterin reductase
mm10_v2_chr2_-_150668198_150668258	0.0943432	Ctcfl_Ctcf	ENSMUST00000028944.3|Acss1|ENSMUSG00000027452.5|acyl-CoA synthetase short-chain family member 1
mm10_v2_chr14_-_24486994_24487064	0.0942536	Ctcfl_Ctcf	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr14_-_55722223_55722264	0.0937159	Ctcfl_Ctcf	ENSMUST00000163889.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr6_+_89643982_89644007	0.0936977	Ctcfl_Ctcf	ENSMUST00000000828.6|Txnrd3|ENSMUSG00000000811.7|thioredoxin reductase 3 	ENSMUST00000101171.1|Txnrd3|ENSMUSG00000000811.7|thioredoxin reductase 3
mm10_v2_chr7_+_75610038_75610080	0.0936146	Ctcfl_Ctcf	ENSMUST00000125771.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr17_+_45563928_45563973	0.0932865	Ctcfl_Ctcf	ENSMUST00000041353.6|Slc35b2|ENSMUSG00000037089.9|solute carrier family 35, member B2
mm10_v2_chr1_-_51915968_51916071	0.0927784	Ctcfl_Ctcf	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_+_164785994_164786071	0.0920098	Ctcfl_Ctcf	ENSMUST00000152471.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr5_+_115559505_115559578	0.0919351	Ctcfl_Ctcf	ENSMUST00000156359.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0 	ENSMUST00000152976.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr5_-_110269816_110269913	0.0913596	Ctcfl_Ctcf	ENSMUST00000059229.9|Pgam5|ENSMUSG00000029500.10|phosphoglycerate mutase family member 5 	ENSMUST00000112505.2|Pgam5|ENSMUSG00000029500.10|phosphoglycerate mutase family member 5
mm10_v2_chr15_-_73184840_73184971	0.0913045	Ctcfl_Ctcf	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr8_-_123515455_123515498	0.0906471	Ctcfl_Ctcf	ENSMUST00000176286.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000169210.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000074879.5|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000066198.7|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000176155.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr9_+_47530173_47530373	0.0902046	Ctcfl_Ctcf	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr5_-_66618752_66618770	0.0885815	Ctcfl_Ctcf	ENSMUST00000162366.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr5_+_107900859_107900879	0.0875089	Ctcfl_Ctcf	ENSMUST00000153590.1|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr5_+_115559467_115559499	0.0874149	Ctcfl_Ctcf	ENSMUST00000086519.5|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr13_+_51651697_51651746	0.0870491	Ctcfl_Ctcf	ENSMUST00000040117.8|Secisbp2|ENSMUSG00000035139.8|SECIS binding protein 2 	ENSMUST00000110044.1|Secisbp2|ENSMUSG00000035139.8|SECIS binding protein 2
mm10_v2_chr9_+_108936648_108936715	0.0866858	Ctcfl_Ctcf	ENSMUST00000026743.8|Uqcrc1|ENSMUSG00000025651.9|ubiquinol-cytochrome c reductase core protein 1
mm10_v2_chr10_+_128748455_128748538	0.0861437	Ctcfl_Ctcf	ENSMUST00000065210.8|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr11_-_82908360_82908411	0.0857002	Ctcfl_Ctcf	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr10_+_88379217_88379299	0.0846891	Ctcfl_Ctcf	ENSMUST00000130301.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 	ENSMUST00000020251.8|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr8_+_79295018_79295123	0.0839034	Ctcfl_Ctcf	ENSMUST00000181030.1|Gm4890|ENSMUSG00000097174.1|predicted gene 4890
mm10_v2_chr13_-_113618549_113618565	0.0827741	Ctcfl_Ctcf	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr11_-_116138862_116138873	0.081573	Ctcfl_Ctcf	ENSMUST00000106439.1|Mrpl38|ENSMUSG00000020775.7|mitochondrial ribosomal protein L38
mm10_v2_chr15_+_100469034_100469075	0.0815359	Ctcfl_Ctcf	ENSMUST00000037001.8|Letmd1|ENSMUSG00000037353.8|LETM1 domain containing 1
mm10_v2_chr12_+_78861693_78861819	0.0812794	Ctcfl_Ctcf	ENSMUST00000071230.7|Eif2s1|ENSMUSG00000021116.9|eukaryotic translation initiation factor 2, subunit 1 alpha
mm10_v2_chr14_-_55722176_55722211	0.0811795	Ctcfl_Ctcf	ENSMUST00000169237.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit 	ENSMUST00000062861.7|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr5_+_110653444_110653482	0.0810847	Ctcfl_Ctcf	ENSMUST00000031478.5|Ddx51|ENSMUSG00000029504.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
mm10_v2_chr11_-_35834492_35834509	0.0802175	Ctcfl_Ctcf	ENSMUST00000018992.3|Rars|ENSMUSG00000018848.4|arginyl-tRNA synthetase
mm10_v2_chr19_-_24280551_24280615	0.0799792	Ctcfl_Ctcf	ENSMUST00000081333.4|Fxn|ENSMUSG00000059363.4|frataxin
mm10_v2_chr9_+_89826944_89826982	0.0795669	Ctcfl_Ctcf	ENSMUST00000184444.1|RP23-184F1.2|ENSMUSG00000098627.1|RP23-184F1.2	ENSMUST00000184759.1|RP23-184F1.2|ENSMUSG00000098627.1|RP23-184F1.2
mm10_v2_chr4_-_126321669_126321704	0.0790776	Ctcfl_Ctcf	ENSMUST00000102617.4|Adprhl2|ENSMUSG00000042558.10|ADP-ribosylhydrolase like 2
mm10_v2_chr6_+_135011609_135011653	0.0775684	Ctcfl_Ctcf	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chrX_-_140600497_140600659	0.0773932	Ctcfl_Ctcf	ENSMUST00000112996.2|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr3_-_104777483_104777547	0.077368	Ctcfl_Ctcf	ENSMUST00000139783.1|Fam19a3|ENSMUSG00000055865.8|family with sequence similarity 19, member A3
mm10_v2_chr5_+_150673739_150673827	0.0773365	Ctcfl_Ctcf	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr8_+_71464910_71465000	0.0771309	Ctcfl_Ctcf	ENSMUST00000048914.6|Mrpl34|ENSMUSG00000034880.6|mitochondrial ribosomal protein L34
mm10_v2_chrX_-_8175890_8175956	0.0756502	Ctcfl_Ctcf	ENSMUST00000143984.1|Tbc1d25|ENSMUSG00000039201.3|TBC1 domain family, member 25
mm10_v2_chr10_-_116950366_116950432	0.0750566	Ctcfl_Ctcf	ENSMUST00000020375.6|Rab3ip|ENSMUSG00000064181.5|RAB3A interacting protein
mm10_v2_chr3_+_122245625_122245722	0.0750321	Ctcfl_Ctcf	ENSMUST00000178826.1|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr6_+_120666388_120666424	0.0749345	Ctcfl_Ctcf	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr17_-_24479034_24479083	0.0739881	Ctcfl_Ctcf	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr1_-_36557517_36557561	0.0739391	Ctcfl_Ctcf	ENSMUST00000114990.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000128104.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000027295.4|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr4_+_53631506_53631574	0.0732342	Ctcfl_Ctcf	ENSMUST00000159415.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000163067.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chrX_-_168123311_168123334	0.0730775	Ctcfl_Ctcf	ENSMUST00000112149.1|Frmpd4|ENSMUSG00000049176.8|FERM and PDZ domain containing 4
mm10_v2_chr15_+_100870670_100870702	0.0709832	Ctcfl_Ctcf	ENSMUST00000082209.6|Scn8a|ENSMUSG00000023033.8|sodium channel, voltage-gated, type VIII, alpha
mm10_v2_chr3_+_122245557_122245578	0.0701914	Ctcfl_Ctcf	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr1_-_36547194_36547233	0.0684499	Ctcfl_Ctcf	ENSMUST00000001172.5|Ankrd39|ENSMUSG00000079610.3|ankyrin repeat domain 39
mm10_v2_chr4_-_43025756_43025788	0.0674003	Ctcfl_Ctcf	ENSMUST00000098109.2|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chr9_+_107888129_107888211	0.0672803	Ctcfl_Ctcf	ENSMUST00000035202.2|Mon1a|ENSMUSG00000032583.2|MON1 homolog A (yeast)
mm10_v2_chr19_-_6141402_6141424	0.0671587	Ctcfl_Ctcf	ENSMUST00000025893.5|Arl2|ENSMUSG00000024944.5|ADP-ribosylation factor-like 2
mm10_v2_chr6_+_42264983_42265032	0.0671585	Ctcfl_Ctcf	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr4_+_43046014_43046043	0.0664554	Ctcfl_Ctcf	ENSMUST00000180426.1|Gm26881|ENSMUSG00000096974.1|predicted gene, 26881
mm10_v2_chr6_+_85915709_85915770	0.0664001	Ctcfl_Ctcf	ENSMUST00000113751.1|Tprkb|ENSMUSG00000054226.7|Tp53rk binding protein 	ENSMUST00000113753.1|Tprkb|ENSMUSG00000054226.7|Tp53rk binding protein 	ENSMUST00000113752.1|Tprkb|ENSMUSG00000054226.7|Tp53rk binding protein 	ENSMUST00000067137.7|Tprkb|ENSMUSG00000054226.7|Tp53rk binding protein
mm10_v2_chr11_+_68901538_68901635	0.066062	Ctcfl_Ctcf	ENSMUST00000073471.6|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000101014.2|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000128952.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000167436.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26
mm10_v2_chr11_-_82871133_82871210	0.0658039	Ctcfl_Ctcf	ENSMUST00000071152.7|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000108173.3|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr9_-_67043709_67043742	0.0656156	Ctcfl_Ctcf	ENSMUST00000113689.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113684.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr9_-_45906837_45906894	0.0654731	Ctcfl_Ctcf	ENSMUST00000161203.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214 	ENSMUST00000058720.5|Rnf214|ENSMUSG00000042790.9|ring finger protein 214 	ENSMUST00000160699.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214
mm10_v2_chr4_+_108460000_108460030	0.0654223	Ctcfl_Ctcf	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr8_+_90828820_90828842	0.0652307	Ctcfl_Ctcf	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr5_-_49524809_49524904	0.0644462	Ctcfl_Ctcf	ENSMUST00000087395.4|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr9_+_44773027_44773100	0.0643887	Ctcfl_Ctcf	ENSMUST00000125877.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr19_+_6400523_6400583	0.0642244	Ctcfl_Ctcf	ENSMUST00000146831.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000035716.8|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000138555.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000167240.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr2_+_170511418_170511560	0.0636328	Ctcfl_Ctcf	ENSMUST00000136839.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4 	ENSMUST00000109148.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4 	ENSMUST00000170167.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4
mm10_v2_chr8_+_111536492_111536640	0.063619	Ctcfl_Ctcf	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr11_-_76577701_76577727	0.0631712	Ctcfl_Ctcf	ENSMUST00000176179.1|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr2_-_62646146_62646234	0.06291	Ctcfl_Ctcf	ENSMUST00000112459.3|Ifih1|ENSMUSG00000026896.8|interferon induced with helicase C domain 1 	ENSMUST00000028259.5|Ifih1|ENSMUSG00000026896.8|interferon induced with helicase C domain 1
mm10_v2_chr11_-_69579320_69579352	0.0628296	Ctcfl_Ctcf	ENSMUST00000048139.5|Wrap53|ENSMUSG00000041346.5|WD repeat containing, antisense to Trp53
mm10_v2_chr2_+_128967383_128967443	0.0628199	Ctcfl_Ctcf	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr2_-_119271202_119271272	0.0617124	Ctcfl_Ctcf	ENSMUST00000037360.7|Rhov|ENSMUSG00000034226.7|ras homolog gene family, member V
mm10_v2_chr2_+_146855861_146855926	0.0614254	Ctcfl_Ctcf	ENSMUST00000099278.2|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1 	ENSMUST00000156232.1|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1
mm10_v2_chr7_+_66839752_66839813	0.0597492	Ctcfl_Ctcf	ENSMUST00000107478.1|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr4_+_155847393_155847467	0.0594876	Ctcfl_Ctcf	ENSMUST00000030948.9|Dvl1|ENSMUSG00000029071.10|dishevelled, dsh homolog 1 (Drosophila) 	ENSMUST00000168552.1|Dvl1|ENSMUSG00000029071.10|dishevelled, dsh homolog 1 (Drosophila)
mm10_v2_chr7_-_127026479_127026496	0.0588193	Ctcfl_Ctcf	ENSMUST00000032916.4|Maz|ENSMUSG00000030678.6|MYC-associated zinc finger protein (purine-binding transcription factor)
mm10_v2_chr5_-_137741601_137741617	0.057952	Ctcfl_Ctcf	ENSMUST00000119498.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 	ENSMUST00000061789.7|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr10_+_111298679_111298689	0.0576787	Ctcfl_Ctcf	ENSMUST00000040454.3|Bbs10|ENSMUSG00000035759.3|Bardet-Biedl syndrome 10 (human)
mm10_v2_chr4_+_103313806_103313820	0.0576714	Ctcfl_Ctcf	ENSMUST00000035780.3|Oma1|ENSMUSG00000035069.3|OMA1 homolog, zinc metallopeptidase (S. cerevisiae)
mm10_v2_chr7_+_24884809_24884917	0.057606	Ctcfl_Ctcf	ENSMUST00000156372.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19 	ENSMUST00000124035.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr14_+_101653967_101654048	0.0574828	Ctcfl_Ctcf	ENSMUST00000002289.6|Uchl3|ENSMUSG00000022111.8|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
mm10_v2_chr2_+_3118523_3118685	0.0574523	Ctcfl_Ctcf	ENSMUST00000062934.6|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr11_-_77894096_77894096	0.0572677	Ctcfl_Ctcf	ENSMUST00000017597.4|Pipox|ENSMUSG00000017453.4|pipecolic acid oxidase
mm10_v2_chr11_+_88973928_88973961	0.0571826	Ctcfl_Ctcf	ENSMUST00000036649.4|Coil|ENSMUSG00000033983.7|coilin 	ENSMUST00000107898.3|Coil|ENSMUSG00000033983.7|coilin
mm10_v2_chr12_+_8313425_8313454	0.0560651	Ctcfl_Ctcf	ENSMUST00000020927.8|Hs1bp3|ENSMUSG00000020605.8|HCLS1 binding protein 3
mm10_v2_chr4_-_132345715_132345747	0.0558905	Ctcfl_Ctcf	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr5_-_37824580_37824584	0.0557429	Ctcfl_Ctcf	ENSMUST00000063116.9|Msx1|ENSMUSG00000048450.10|msh homeobox 1
mm10_v2_chr19_-_43752924_43753001	0.0556704	Ctcfl_Ctcf	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr11_-_58938851_58938923	0.0553022	Ctcfl_Ctcf	ENSMUST00000094151.5|Rnf187|ENSMUSG00000020496.8|ring finger protein 187
mm10_v2_chr13_+_51100810_51100933	0.0550926	Ctcfl_Ctcf	ENSMUST00000095797.5|Spin1|ENSMUSG00000021395.10|spindlin 1
mm10_v2_chr11_-_70687917_70687981	0.0549437	Ctcfl_Ctcf	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr7_-_46710642_46710687	0.0545657	Ctcfl_Ctcf	ENSMUST00000143082.1|Saal1|ENSMUSG00000006763.6|serum amyloid A-like 1
mm10_v2_chr7_-_34655500_34655515	0.0545431	Ctcfl_Ctcf	ENSMUST00000032709.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr14_+_45329815_45329849	0.0541907	Ctcfl_Ctcf	ENSMUST00000022380.7|Psmc6|ENSMUSG00000021832.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm10_v2_chr4_-_132345686_132345708	0.0539025	Ctcfl_Ctcf	ENSMUST00000030726.6|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr9_+_30427329_30427329	0.0536238	Ctcfl_Ctcf	ENSMUST00000164099.1|Snx19|ENSMUSG00000031993.6|sorting nexin 19
mm10_v2_chr9_-_53667429_53667521	0.0535928	Ctcfl_Ctcf	ENSMUST00000166367.1|Cul5|ENSMUSG00000032030.10|cullin 5 	ENSMUST00000034529.7|Cul5|ENSMUSG00000032030.10|cullin 5
mm10_v2_chr12_-_101958148_101958246	0.0530725	Ctcfl_Ctcf	ENSMUST00000159883.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000160251.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000161011.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000021606.5|Atxn3|ENSMUSG00000021189.5|ataxin 3
mm10_v2_chr6_+_135197977_135198023	0.052999	Ctcfl_Ctcf	ENSMUST00000111915.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene 	ENSMUST00000111916.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr1_-_191575534_191575549	0.0529894	Ctcfl_Ctcf	ENSMUST00000027933.5|Dtl|ENSMUSG00000037474.8|denticleless homolog (Drosophila)
mm10_v2_chr5_+_107900502_107900577	0.0523117	Ctcfl_Ctcf	ENSMUST00000082223.6|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr6_+_17463826_17463829	0.0520308	Ctcfl_Ctcf	ENSMUST00000140070.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr19_-_45816007_45816076	0.0514907	Ctcfl_Ctcf	ENSMUST00000079431.3|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000026247.6|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000162528.2|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr5_-_66618772_66618828	0.0506272	Ctcfl_Ctcf	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr1_+_9545397_9545479	0.0502533	Ctcfl_Ctcf	ENSMUST00000072079.7|Rrs1|ENSMUSG00000061024.7|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm10_v2_chr13_-_98815408_98815449	0.0489441	Ctcfl_Ctcf	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr10_+_93160824_93160894	0.0485972	Ctcfl_Ctcf	ENSMUST00000069965.7|Cdk17|ENSMUSG00000020015.9|cyclin-dependent kinase 17
mm10_v2_chrX_+_42149534_42149683	0.0482831	Ctcfl_Ctcf	ENSMUST00000127618.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr2_+_127008711_127008756	0.0479768	Ctcfl_Ctcf	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chr16_+_33185045_33185153	0.0476107	Ctcfl_Ctcf	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr8_+_70282978_70283044	0.0475704	Ctcfl_Ctcf	ENSMUST00000110124.2|Homer3|ENSMUSG00000003573.9|homer homolog 3 (Drosophila)
mm10_v2_chr7_-_17027853_17027921	0.0475091	Ctcfl_Ctcf	ENSMUST00000003183.5|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr10_-_43540945_43541024	0.0472827	Ctcfl_Ctcf	ENSMUST00000147196.1|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene 	ENSMUST00000019932.3|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene
mm10_v2_chr13_-_54749849_54749893	0.047023	Ctcfl_Ctcf	ENSMUST00000135343.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr4_+_53631460_53631505	0.0467257	Ctcfl_Ctcf	ENSMUST00000179534.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000132151.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr1_+_161969284_161969313	0.0460552	Ctcfl_Ctcf	ENSMUST00000160881.1|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C 	ENSMUST00000159648.1|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C
mm10_v2_chr4_+_88760774_88760774	0.0459765	Ctcfl_Ctcf	ENSMUST00000178480.1|Gm13283|ENSMUSG00000094355.1|predicted gene 13283
mm10_v2_chr11_+_104231573_104231584	0.0456861	Ctcfl_Ctcf	ENSMUST00000132977.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000132245.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000100347.4|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr6_+_127446819_127446872	0.0452941	Ctcfl_Ctcf	ENSMUST00000112191.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr6_+_50110186_50110383	0.045229	Ctcfl_Ctcf	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr8_-_95488774_95488852	0.0451621	Ctcfl_Ctcf	ENSMUST00000056919.7|Csnk2a2|ENSMUSG00000046707.8|casein kinase 2, alpha prime polypeptide
mm10_v2_chr2_+_91650116_91650133	0.0439137	Ctcfl_Ctcf	ENSMUST00000111331.2|Arhgap1|ENSMUSG00000027247.10|Rho GTPase activating protein 1
mm10_v2_chr7_+_24884611_24884644	0.0438782	Ctcfl_Ctcf	ENSMUST00000108428.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr2_+_91650169_91650237	0.0436169	Ctcfl_Ctcf	ENSMUST00000090614.4|Arhgap1|ENSMUSG00000027247.10|Rho GTPase activating protein 1
mm10_v2_chr13_+_55105290_55105399	0.0430772	Ctcfl_Ctcf	ENSMUST00000161315.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000021937.5|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159278.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159147.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000161077.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346
mm10_v2_chr15_-_36496722_36496808	0.0429422	Ctcfl_Ctcf	ENSMUST00000057486.7|Ankrd46|ENSMUSG00000048307.7|ankyrin repeat domain 46
mm10_v2_chr11_+_119267887_119267968	0.0426062	Ctcfl_Ctcf	ENSMUST00000106259.2|Gaa|ENSMUSG00000025579.8|glucosidase, alpha, acid
mm10_v2_chr9_-_67043832_67043843	0.0425974	Ctcfl_Ctcf	ENSMUST00000113686.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr4_+_43381979_43382084	0.0423684	Ctcfl_Ctcf	ENSMUST00000035645.5|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000144911.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr13_-_54749627_54749697	0.0422764	Ctcfl_Ctcf	ENSMUST00000099506.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr9_-_67043953_67043962	0.0416812	Ctcfl_Ctcf	ENSMUST00000113690.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr5_-_5266038_5266292	0.0415722	Ctcfl_Ctcf	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr4_-_145194999_145195044	0.0411217	Ctcfl_Ctcf	ENSMUST00000036579.7|Vps13d|ENSMUSG00000020220.10|vacuolar protein sorting 13 D (yeast)
mm10_v2_chr14_+_53469756_53469756	0.0410269	Ctcfl_Ctcf	ENSMUST00000103643.2|Trav8-1|ENSMUSG00000076831.2|T cell receptor alpha variable 8-1
mm10_v2_chr11_-_103101609_103101662	0.0408602	Ctcfl_Ctcf	ENSMUST00000103077.1|Plcd3|ENSMUSG00000020937.8|phospholipase C, delta 3
mm10_v2_chr4_-_126468580_126468653	0.040859	Ctcfl_Ctcf	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr7_+_64502090_64502155	0.0407963	Ctcfl_Ctcf	ENSMUST00000137732.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr7_+_24884651_24884714	0.0407703	Ctcfl_Ctcf	ENSMUST00000153451.2|Rps19|ENSMUSG00000040952.10|ribosomal protein S19 	ENSMUST00000108429.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr14_+_21500879_21500897	0.0399493	Ctcfl_Ctcf	ENSMUST00000182964.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr6_+_124931378_124931425	0.0396512	Ctcfl_Ctcf	ENSMUST00000032214.7|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2 	ENSMUST00000180095.1|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2
mm10_v2_chr2_-_91649785_91649796	0.0395365	Ctcfl_Ctcf	ENSMUST00000111333.1|Zfp408|ENSMUSG00000075040.3|zinc finger protein 408
mm10_v2_chr8_-_79294928_79294961	0.0388733	Ctcfl_Ctcf	ENSMUST00000048718.2|Mmaa|ENSMUSG00000037022.2|methylmalonic aciduria (cobalamin deficiency) type A
mm10_v2_chr11_+_114668524_114668626	0.0385612	Ctcfl_Ctcf	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr9_-_110101010_110101087	0.0381481	Ctcfl_Ctcf	ENSMUST00000062368.6|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr14_-_31830402_31830440	0.0381372	Ctcfl_Ctcf	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr3_-_65529355_65529384	0.0380709	Ctcfl_Ctcf	ENSMUST00000099076.3|4931440P22Rik|ENSMUSG00000074580.5|RIKEN cDNA 4931440P22 gene
mm10_v2_chr2_-_75704535_75704641	0.038033	Ctcfl_Ctcf	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chrX_+_94367112_94367134	0.0379226	Ctcfl_Ctcf	ENSMUST00000113898.1|Apoo|ENSMUSG00000079508.2|apolipoprotein O
mm10_v2_chr14_-_101609033_101609191	0.0378081	Ctcfl_Ctcf	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr17_+_47688992_47689030	0.0375477	Ctcfl_Ctcf	ENSMUST00000156118.1|Frs3|ENSMUSG00000023266.5|fibroblast growth factor receptor substrate 3
mm10_v2_chr2_-_121355284_121355396	0.0374001	Ctcfl_Ctcf	ENSMUST00000134796.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110628.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110627.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110625.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1
mm10_v2_chr16_-_91044473_91044543	0.0369874	Ctcfl_Ctcf	ENSMUST00000118522.1|Paxbp1|ENSMUSG00000022974.6|PAX3 and PAX7 binding protein 1
mm10_v2_chr19_-_10880370_10880411	0.0367236	Ctcfl_Ctcf	ENSMUST00000133303.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr5_-_3893907_3893933	0.0364162	Ctcfl_Ctcf	ENSMUST00000117463.1|Mterf|ENSMUSG00000040429.5|mitochondrial transcription termination factor 	ENSMUST00000044746.4|Mterf|ENSMUSG00000040429.5|mitochondrial transcription termination factor
mm10_v2_chr2_+_79255500_79255552	0.0363493	Ctcfl_Ctcf	ENSMUST00000099972.4|Itga4|ENSMUSG00000027009.12|integrin alpha 4
mm10_v2_chr13_-_95891905_95891929	0.0359466	Ctcfl_Ctcf	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr4_-_132212060_132212130	0.0359121	Ctcfl_Ctcf	ENSMUST00000085181.4|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr13_+_35741313_35741385	0.0356936	Ctcfl_Ctcf	ENSMUST00000163595.2|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr8_+_95332279_95332342	0.0356259	Ctcfl_Ctcf	ENSMUST00000034245.8|Usb1|ENSMUSG00000031792.8|U6 snRNA biogenesis 1
mm10_v2_chr7_-_74554726_74554791	0.0352609	Ctcfl_Ctcf	ENSMUST00000107453.1|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1
mm10_v2_chr5_-_123132651_123132692	0.0349481	Ctcfl_Ctcf	ENSMUST00000031401.5|Rhof|ENSMUSG00000029449.5|ras homolog gene family, member f
mm10_v2_chr5_+_4192367_4192367	0.0346059	Ctcfl_Ctcf	ENSMUST00000177258.1|Gm9897|ENSMUSG00000053178.5|predicted gene 9897
mm10_v2_chr1_-_132367879_132367894	0.0340385	Ctcfl_Ctcf	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr3_+_19894855_19894894	0.0336858	Ctcfl_Ctcf	ENSMUST00000059704.4|4632415L05Rik|ENSMUSG00000048106.4|RIKEN cDNA 4632415L05 gene
mm10_v2_chr1_+_161969179_161969259	0.033558	Ctcfl_Ctcf	ENSMUST00000111594.2|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C 	ENSMUST00000028021.6|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C
mm10_v2_chr19_+_43689672_43689695	0.0321295	Ctcfl_Ctcf	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr15_+_99295087_99295279	0.0315449	Ctcfl_Ctcf	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr11_+_50131342_50131426	0.0313429	Ctcfl_Ctcf	ENSMUST00000093138.6|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B 	ENSMUST00000101270.4|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B
mm10_v2_chr7_+_108934405_108934430	0.0310933	Ctcfl_Ctcf	ENSMUST00000033342.6|Eif3f|ENSMUSG00000031029.6|eukaryotic translation initiation factor 3, subunit F
mm10_v2_chr1_+_143777263_143777327	0.0309414	Ctcfl_Ctcf	ENSMUST00000018333.6|Uchl5|ENSMUSG00000018189.6|ubiquitin carboxyl-terminal esterase L5
mm10_v2_chr7_+_107595051_107595233	0.030687	Ctcfl_Ctcf	ENSMUST00000040056.7|Ppfibp2|ENSMUSG00000036528.8|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm10_v2_chr5_+_3596066_3596256	0.0304665	Ctcfl_Ctcf	ENSMUST00000006061.6|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1 	ENSMUST00000121291.1|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1 	ENSMUST00000142516.1|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1
mm10_v2_chr8_+_94857450_94857494	0.030432	Ctcfl_Ctcf	ENSMUST00000109521.3|Polr2c|ENSMUSG00000031783.9|polymerase (RNA) II (DNA directed) polypeptide C
mm10_v2_chr7_-_17027807_17027846	0.0303348	Ctcfl_Ctcf	ENSMUST00000142597.1|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr19_-_42779936_42779985	0.0301114	Ctcfl_Ctcf	ENSMUST00000069298.6|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human) 	ENSMUST00000160455.1|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human) 	ENSMUST00000162004.1|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human)
mm10_v2_chr3_-_89245829_89245899	0.0294399	Ctcfl_Ctcf	ENSMUST00000041022.8|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr14_+_55604550_55604579	0.0292842	Ctcfl_Ctcf	ENSMUST00000138037.1|Irf9|ENSMUSG00000002325.8|interferon regulatory factor 9
mm10_v2_chr1_+_37997975_37998010	0.0292223	Ctcfl_Ctcf	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr7_+_127471484_127471551	0.028887	Ctcfl_Ctcf	ENSMUST00000033095.8|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr17_-_24209377_24209416	0.0285599	Ctcfl_Ctcf	ENSMUST00000024931.4|Ntn3|ENSMUSG00000079662.1|netrin 3
mm10_v2_chrX_+_38189829_38189842	0.028006	Ctcfl_Ctcf	ENSMUST00000131124.1|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33
mm10_v2_chr2_-_121442574_121442614	0.0277477	Ctcfl_Ctcf	ENSMUST00000116432.1|Ell3|ENSMUSG00000027246.6|elongation factor RNA polymerase II-like 3
mm10_v2_chr9_+_66158206_66158271	0.0277456	Ctcfl_Ctcf	ENSMUST00000034944.2|Dapk2|ENSMUSG00000032380.2|death-associated protein kinase 2
mm10_v2_chr2_+_28513243_28513326	0.0276101	Ctcfl_Ctcf	ENSMUST00000028170.8|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr3_-_136326038_136326060	0.0274579	Ctcfl_Ctcf	ENSMUST00000041577.8|Bank1|ENSMUSG00000037922.9|B cell scaffold protein with ankyrin repeats 1
mm10_v2_chr5_-_41844168_41844329	0.0273719	Ctcfl_Ctcf	ENSMUST00000050556.7|Bod1l|ENSMUSG00000061755.7|biorientation of chromosomes in cell division 1-like
mm10_v2_chr7_-_105810947_105811099	0.0268108	Ctcfl_Ctcf	ENSMUST00000176887.1|Mrpl17|ENSMUSG00000030879.9|mitochondrial ribosomal protein L17 	ENSMUST00000124482.1|Mrpl17|ENSMUSG00000030879.9|mitochondrial ribosomal protein L17
mm10_v2_chr17_-_31855782_31855802	0.0267113	Ctcfl_Ctcf	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr2_-_26409161_26409209	0.0259543	Ctcfl_Ctcf	ENSMUST00000145701.1|Inpp5e|ENSMUSG00000026925.10|inositol polyphosphate-5-phosphatase E
mm10_v2_chr12_+_70825492_70825514	0.0257531	Ctcfl_Ctcf	ENSMUST00000057859.7|Frmd6|ENSMUSG00000048285.8|FERM domain containing 6
mm10_v2_chr9_+_110333276_110333327	0.024663	Ctcfl_Ctcf	ENSMUST00000125823.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000131328.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr2_+_25403044_25403115	0.0246039	Ctcfl_Ctcf	ENSMUST00000071442.5|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1
mm10_v2_chr11_+_104231465_104231507	0.0244862	Ctcfl_Ctcf	ENSMUST00000145227.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr1_+_105663855_105663866	0.0243895	Ctcfl_Ctcf	ENSMUST00000086721.3|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene 	ENSMUST00000039173.6|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene
mm10_v2_chr19_+_4962306_4962332	0.0243647	Ctcfl_Ctcf	ENSMUST00000025836.4|Mrpl11|ENSMUSG00000024902.4|mitochondrial ribosomal protein L11
mm10_v2_chr3_-_130060850_130060907	0.0229281	Ctcfl_Ctcf	ENSMUST00000001079.8|Sec24b|ENSMUSG00000001052.9|Sec24 related gene family, member B (S. cerevisiae)
mm10_v2_chr10_+_81292961_81293005	0.0227587	Ctcfl_Ctcf	ENSMUST00000163075.1|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000105327.3|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000045469.8|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm10_v2_chrX_-_10216918_10216921	0.0226744	Ctcfl_Ctcf	ENSMUST00000072393.2|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000044598.6|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000073392.4|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115533.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115532.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr19_+_46056539_46056586	0.0225045	Ctcfl_Ctcf	ENSMUST00000111899.1|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000099392.3|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000062322.4|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm10_v2_chr2_+_164785823_164785991	0.0222753	Ctcfl_Ctcf	ENSMUST00000174070.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000172577.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000056181.6|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr5_+_144100387_144100436	0.0218538	Ctcfl_Ctcf	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr3_-_105687552_105687591	0.0215383	Ctcfl_Ctcf	ENSMUST00000090680.6|Ddx20|ENSMUSG00000027905.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
mm10_v2_chr11_+_51967649_51967709	0.0214618	Ctcfl_Ctcf	ENSMUST00000102763.4|Cdkn2aipnl|ENSMUSG00000020392.8|CDKN2A interacting protein N-terminal like
mm10_v2_chr14_+_25694170_25694233	0.0213571	Ctcfl_Ctcf	ENSMUST00000022419.6|Ppif|ENSMUSG00000021868.6|peptidylprolyl isomerase F (cyclophilin F)
mm10_v2_chr3_-_87768966_87768975	0.0209948	Ctcfl_Ctcf	ENSMUST00000174776.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr15_+_44787746_44787782	0.0209502	Ctcfl_Ctcf	ENSMUST00000181839.1|2310069G16Rik|ENSMUSG00000097102.1|RIKEN cDNA 2310069G16 gene
mm10_v2_chr8_-_95331756_95331950	0.0208937	Ctcfl_Ctcf	ENSMUST00000057717.6|Zfp319|ENSMUSG00000046556.6|zinc finger protein 319
mm10_v2_chr5_+_114707760_114707866	0.0204894	Ctcfl_Ctcf	ENSMUST00000094441.4|Tchp|ENSMUSG00000002486.9|trichoplein, keratin filament binding
mm10_v2_chr16_-_20302358_20302401	0.0202093	Ctcfl_Ctcf	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chr1_+_92910805_92910834	0.0199927	Ctcfl_Ctcf	ENSMUST00000179711.1|Rnpepl1|ENSMUSG00000026269.8|arginyl aminopeptidase (aminopeptidase B)-like 1
mm10_v2_chr2_-_91649751_91649784	0.01987	Ctcfl_Ctcf	ENSMUST00000099714.3|Zfp408|ENSMUSG00000075040.3|zinc finger protein 408
mm10_v2_chr11_+_101246405_101246567	0.0196763	Ctcfl_Ctcf	ENSMUST00000122006.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2 	ENSMUST00000151830.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr18_+_12643329_12643395	0.0196499	Ctcfl_Ctcf	ENSMUST00000025294.7|Ttc39c|ENSMUSG00000024424.8|tetratricopeptide repeat domain 39C
mm10_v2_chr4_-_132212255_132212303	0.0196063	Ctcfl_Ctcf	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr11_-_76763550_76763582	0.0194916	Ctcfl_Ctcf	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chrX_+_94367147_94367183	0.019468	Ctcfl_Ctcf	ENSMUST00000113897.2|Apoo|ENSMUSG00000079508.2|apolipoprotein O 	ENSMUST00000113896.1|Apoo|ENSMUSG00000079508.2|apolipoprotein O 	ENSMUST00000113895.1|Apoo|ENSMUSG00000079508.2|apolipoprotein O
mm10_v2_chr6_+_47835650_47835725	0.0194246	Ctcfl_Ctcf	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr2_-_26409100_26409133	0.019279	Ctcfl_Ctcf	ENSMUST00000114090.1|Inpp5e|ENSMUSG00000026925.10|inositol polyphosphate-5-phosphatase E
mm10_v2_chr9_-_59525446_59525501	0.0191786	Ctcfl_Ctcf	ENSMUST00000055345.7|Tmem202|ENSMUSG00000049526.7|transmembrane protein 202
mm10_v2_chr11_+_55204319_55204386	0.018689	Ctcfl_Ctcf	ENSMUST00000108872.2|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000147506.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000020499.7|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr6_-_72380416_72380483	0.0184584	Ctcfl_Ctcf	ENSMUST00000101285.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5 	ENSMUST00000074231.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5
mm10_v2_chr8_-_70700070_70700088	0.0183802	Ctcfl_Ctcf	ENSMUST00000116172.1|Gm11175|ENSMUSG00000080058.1|predicted gene 11175
mm10_v2_chr9_+_44772951_44772964	0.0183647	Ctcfl_Ctcf	ENSMUST00000128150.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr17_+_47695171_47695204	0.0173786	Ctcfl_Ctcf	ENSMUST00000113296.1|Frs3|ENSMUSG00000023266.5|fibroblast growth factor receptor substrate 3
mm10_v2_chr2_+_32151074_32151262	0.0171876	Ctcfl_Ctcf	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr2_+_131210501_131210604	0.0171587	Ctcfl_Ctcf	ENSMUST00000110206.1|Ap5s1|ENSMUSG00000068264.5|adaptor-related protein 5 complex, sigma 1 subunit
mm10_v2_chr3_+_54735536_54735586	0.0168588	Ctcfl_Ctcf	ENSMUST00000044567.3|Alg5|ENSMUSG00000036632.3|asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase)
mm10_v2_chr7_-_80340214_80340231	0.0166096	Ctcfl_Ctcf	ENSMUST00000127997.1|Unc45a|ENSMUSG00000030533.9|unc-45 homolog A (C. elegans) 	ENSMUST00000032748.8|Unc45a|ENSMUSG00000030533.9|unc-45 homolog A (C. elegans)
mm10_v2_chr15_+_81744848_81744848	0.0164415	Ctcfl_Ctcf	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr9_-_67043743_67043820	0.016413	Ctcfl_Ctcf	ENSMUST00000113695.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr2_+_105130883_105130981	0.0163969	Ctcfl_Ctcf	ENSMUST00000111098.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog 	ENSMUST00000111099.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog
mm10_v2_chr9_+_64960892_64960937	0.0163007	Ctcfl_Ctcf	ENSMUST00000037504.5|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr9_+_21546842_21546936	0.0159392	Ctcfl_Ctcf	ENSMUST00000034703.8|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115395.3|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115394.1|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1
mm10_v2_chr2_-_12301914_12301922	0.0155835	Ctcfl_Ctcf	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr1_+_82839449_82839518	0.0152786	Ctcfl_Ctcf	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chrX_-_10216437_10216482	0.0151123	Ctcfl_Ctcf	ENSMUST00000115534.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr16_-_17911303_17911354	0.0147979	Ctcfl_Ctcf	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr1_-_65179058_65179181	0.0147644	Ctcfl_Ctcf	ENSMUST00000097709.4|Idh1|ENSMUSG00000025950.10|isocitrate dehydrogenase 1 (NADP+), soluble
mm10_v2_chr9_-_67043869_67043945	0.0144868	Ctcfl_Ctcf	ENSMUST00000113696.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr12_+_16653470_16653486	0.0144238	Ctcfl_Ctcf	ENSMUST00000111064.1|Ntsr2|ENSMUSG00000020591.10|neurotensin receptor 2
mm10_v2_chr6_+_83165920_83166004	0.0143126	Ctcfl_Ctcf	ENSMUST00000077407.5|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000113913.1|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000130212.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr3_-_96594128_96594181	0.0137965	Ctcfl_Ctcf	ENSMUST00000145001.1|Polr3gl|ENSMUSG00000028104.8|polymerase (RNA) III (DNA directed) polypeptide G like 	ENSMUST00000091924.3|Polr3gl|ENSMUSG00000028104.8|polymerase (RNA) III (DNA directed) polypeptide G like
mm10_v2_chr7_+_45924072_45924243	0.0137791	Ctcfl_Ctcf	ENSMUST00000120643.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114 	ENSMUST00000117998.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114 	ENSMUST00000133500.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114
mm10_v2_chr2_+_148681023_148681197	0.0137554	Ctcfl_Ctcf	ENSMUST00000028928.7|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr11_+_101733011_101733041	0.0130027	Ctcfl_Ctcf	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr16_-_84735742_84735795	0.0129706	Ctcfl_Ctcf	ENSMUST00000116584.1|Mrpl39|ENSMUSG00000022889.7|mitochondrial ribosomal protein L39
mm10_v2_chr2_+_76369967_76370024	0.0124363	Ctcfl_Ctcf	ENSMUST00000046389.4|Rbm45|ENSMUSG00000042369.8|RNA binding motif protein 45
mm10_v2_chr10_-_14705459_14705560	0.012338	Ctcfl_Ctcf	ENSMUST00000149485.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae) 	ENSMUST00000154132.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae)
mm10_v2_chr4_+_24898080_24898176	0.012002	Ctcfl_Ctcf	ENSMUST00000029925.3|Ndufaf4|ENSMUSG00000028261.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 	ENSMUST00000151249.1|Ndufaf4|ENSMUSG00000028261.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm10_v2_chr5_+_147957310_147957357	0.0119364	Ctcfl_Ctcf	ENSMUST00000085558.4|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2 	ENSMUST00000129092.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr8_-_64693027_64693040	0.011377	Ctcfl_Ctcf	ENSMUST00000048967.7|Cpe|ENSMUSG00000037852.7|carboxypeptidase E
mm10_v2_chr5_+_137518880_137518880	0.0112997	Ctcfl_Ctcf	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr4_+_48539909_48539935	0.0112885	Ctcfl_Ctcf	ENSMUST00000061135.1|Msantd3|ENSMUSG00000039693.5|Myb/SANT-like DNA-binding domain containing 3
mm10_v2_chr1_+_150392794_150392849	0.0110176	Ctcfl_Ctcf	ENSMUST00000124973.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr6_-_85915653_85915692	0.0109231	Ctcfl_Ctcf	ENSMUST00000161198.2|Cml1|ENSMUSG00000057103.10|camello-like 1
mm10_v2_chr4_+_125085134_125085261	0.0107342	Ctcfl_Ctcf	ENSMUST00000154689.1|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6 	ENSMUST00000055213.4|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6 	ENSMUST00000106171.2|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6
mm10_v2_chr17_-_66101466_66101559	0.0104846	Ctcfl_Ctcf	ENSMUST00000024909.8|Ndufv2|ENSMUSG00000024099.8|NADH dehydrogenase (ubiquinone) flavoprotein 2 	ENSMUST00000147484.1|Ndufv2|ENSMUSG00000024099.8|NADH dehydrogenase (ubiquinone) flavoprotein 2 	ENSMUST00000143987.1|Ndufv2|ENSMUSG00000024099.8|NADH dehydrogenase (ubiquinone) flavoprotein 2
mm10_v2_chr10_+_127380799_127380878	0.0102583	Ctcfl_Ctcf	ENSMUST00000111628.2|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr7_-_16221993_16222050	0.0101334	Ctcfl_Ctcf	ENSMUST00000118795.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000119102.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000094816.2|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000163968.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000121123.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm10_v2_chr18_+_37473538_37473562	0.00999705	Ctcfl_Ctcf	ENSMUST00000050034.1|Pcdhb15|ENSMUSG00000047033.1|protocadherin beta 15
mm10_v2_chr12_-_100725028_100725081	0.00998448	Ctcfl_Ctcf	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr2_+_148681199_148681218	0.00980173	Ctcfl_Ctcf	ENSMUST00000131292.1|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr1_+_86064619_86064648	0.00979755	Ctcfl_Ctcf	ENSMUST00000027432.8|Psmd1|ENSMUSG00000026229.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm10_v2_chr1_-_190170671_190170744	0.00977493	Ctcfl_Ctcf	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr5_-_115652974_115652992	0.00952919	Ctcfl_Ctcf	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr15_-_99772596_99772608	0.00927674	Ctcfl_Ctcf	ENSMUST00000023762.6|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr19_-_4306214_4306369	0.00912983	Ctcfl_Ctcf	ENSMUST00000171123.1|Adrbk1|ENSMUSG00000024858.7|adrenergic receptor kinase, beta 1 	ENSMUST00000088737.4|Adrbk1|ENSMUSG00000024858.7|adrenergic receptor kinase, beta 1
mm10_v2_chr16_-_20426322_20426372	0.00892127	Ctcfl_Ctcf	ENSMUST00000115547.2|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5 	ENSMUST00000096199.4|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr1_-_193130201_193130257	0.00882851	Ctcfl_Ctcf	ENSMUST00000085555.1|Diexf|ENSMUSG00000016181.4|digestive organ expansion factor homolog (zebrafish)
mm10_v2_chr19_-_40612160_40612255	0.00872491	Ctcfl_Ctcf	ENSMUST00000132452.1|Tctn3|ENSMUSG00000025008.9|tectonic family member 3 	ENSMUST00000135795.1|Tctn3|ENSMUSG00000025008.9|tectonic family member 3 	ENSMUST00000025981.8|Tctn3|ENSMUSG00000025008.9|tectonic family member 3
mm10_v2_chr14_-_70167973_70168004	0.0086809	Ctcfl_Ctcf	ENSMUST00000125300.1|Pdlim2|ENSMUSG00000022090.4|PDZ and LIM domain 2
mm10_v2_chr10_+_25359798_25359844	0.00838655	Ctcfl_Ctcf	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr7_+_44896077_44896106	0.0080564	Ctcfl_Ctcf	ENSMUST00000071207.7|Fuz|ENSMUSG00000011658.8|fuzzy homolog (Drosophila) 	ENSMUST00000166849.1|Fuz|ENSMUSG00000011658.8|fuzzy homolog (Drosophila) 	ENSMUST00000168712.1|Fuz|ENSMUSG00000011658.8|fuzzy homolog (Drosophila) 	ENSMUST00000168389.1|Fuz|ENSMUSG00000011658.8|fuzzy homolog (Drosophila)
mm10_v2_chr1_+_163779575_163779592	0.00762348	Ctcfl_Ctcf	ENSMUST00000027877.6|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3 	ENSMUST00000077642.5|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3
mm10_v2_chr18_-_53744509_53744629	0.00752573	Ctcfl_Ctcf	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr10_+_29313227_29313281	0.00737364	Ctcfl_Ctcf	ENSMUST00000161605.1|Echdc1|ENSMUSG00000019883.4|enoyl Coenzyme A hydratase domain containing 1
mm10_v2_chr11_+_101246960_101247093	0.00733382	Ctcfl_Ctcf	ENSMUST00000107282.3|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr9_+_44772909_44772949	0.00699305	Ctcfl_Ctcf	ENSMUST00000002099.3|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr18_+_38296805_38296819	0.00698423	Ctcfl_Ctcf	ENSMUST00000171461.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr9_+_64960814_64960843	0.00687658	Ctcfl_Ctcf	ENSMUST00000170517.1|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr4_+_127243784_127243856	0.00661953	Ctcfl_Ctcf	ENSMUST00000142029.1|Smim12|ENSMUSG00000042380.8|small integral membrane protein 12
mm10_v2_chr9_+_110333402_110333636	0.00637515	Ctcfl_Ctcf	ENSMUST00000133114.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000125759.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chrX_+_38189780_38189826	0.00610289	Ctcfl_Ctcf	ENSMUST00000049740.2|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33 	ENSMUST00000115142.2|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33
mm10_v2_chr3_-_103737995_103738006	0.00561818	Ctcfl_Ctcf	ENSMUST00000029440.8|Olfml3|ENSMUSG00000027848.10|olfactomedin-like 3
mm10_v2_chr18_+_37020097_37020230	0.00526651	Ctcfl_Ctcf	ENSMUST00000047614.1|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr16_+_21204755_21204787	0.0050994	Ctcfl_Ctcf	ENSMUST00000006112.6|Ephb3|ENSMUSG00000005958.8|Eph receptor B3
mm10_v2_chr18_-_49755548_49755601	0.00498147	Ctcfl_Ctcf	ENSMUST00000163590.1|Dtwd2|ENSMUSG00000024505.9|DTW domain containing 2 	ENSMUST00000025383.8|Dtwd2|ENSMUSG00000024505.9|DTW domain containing 2
mm10_v2_chr5_+_140331860_140331954	0.00491978	Ctcfl_Ctcf	ENSMUST00000071881.3|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000050205.5|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000110827.1|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1
mm10_v2_chr11_+_72435511_72435529	0.00490797	Ctcfl_Ctcf	ENSMUST00000076443.3|Ggt6|ENSMUSG00000040471.11|gamma-glutamyltransferase 6
mm10_v2_chr11_+_84179792_84179849	0.0048301	Ctcfl_Ctcf	ENSMUST00000137500.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha 	ENSMUST00000130012.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha
mm10_v2_chr15_-_99772395_99772462	0.00477971	Ctcfl_Ctcf	ENSMUST00000109035.4|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr7_+_80343091_80343146	0.00473879	Ctcfl_Ctcf	ENSMUST00000032747.5|Hddc3|ENSMUSG00000030532.5|HD domain containing 3
mm10_v2_chr6_+_124663027_124663174	0.00455517	Ctcfl_Ctcf	ENSMUST00000004381.7|Lpcat3|ENSMUSG00000004270.7|lysophosphatidylcholine acyltransferase 3
mm10_v2_chr13_-_113046357_113046422	0.00418992	Ctcfl_Ctcf	ENSMUST00000022282.3|Gpx8|ENSMUSG00000021760.3|glutathione peroxidase 8 (putative)
mm10_v2_chr1_-_16519284_16519336	0.00417944	Ctcfl_Ctcf	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr16_+_95702044_95702094	0.00386732	Ctcfl_Ctcf	ENSMUST00000023612.8|Ets2|ENSMUSG00000022895.8|E26 avian leukemia oncogene 2, 3' domain
mm10_v2_chr17_+_29268788_29268843	0.00368912	Ctcfl_Ctcf	ENSMUST00000064709.5|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004 	ENSMUST00000120346.1|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr3_-_89773221_89773279	0.00360886	Ctcfl_Ctcf	ENSMUST00000038450.1|4632404H12Rik|ENSMUSG00000042579.1|RIKEN cDNA 4632404H12 gene
mm10_v2_chr12_-_20815718_20815733	0.0032671	Ctcfl_Ctcf	ENSMUST00000110971.2|1700030C10Rik|ENSMUSG00000091071.1|RIKEN cDNA 1700030C10 gene
mm10_v2_chr5_-_102069905_102069940	0.00305507	Ctcfl_Ctcf	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr19_+_5568002_5568074	0.00297052	Ctcfl_Ctcf	ENSMUST00000096318.3|Ap5b1|ENSMUSG00000049562.5|adaptor-related protein complex 5, beta 1 subunit
mm10_v2_chr13_-_54055650_54055680	0.00288452	Ctcfl_Ctcf	ENSMUST00000021932.5|Drd1a|ENSMUSG00000021478.5|dopamine receptor D1A
mm10_v2_chr18_+_38296635_38296719	0.00280792	Ctcfl_Ctcf	ENSMUST00000072376.5|Rnf14|ENSMUSG00000060450.7|ring finger protein 14 	ENSMUST00000170811.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr11_+_63132569_63132677	0.00278299	Ctcfl_Ctcf	ENSMUST00000108701.1|Pmp22|ENSMUSG00000018217.6|peripheral myelin protein 22
mm10_v2_chr5_-_140331873_140331898	0.00231531	Ctcfl_Ctcf	ENSMUST00000031536.7|Ftsj2|ENSMUSG00000029557.7|FtsJ homolog 2 (E. coli)
mm10_v2_chr11_+_98682554_98682573	0.00197213	Ctcfl_Ctcf	ENSMUST00000017365.8|Psmd3|ENSMUSG00000017221.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm10_v2_chr19_+_5878622_5878656	0.0017208	Ctcfl_Ctcf	ENSMUST00000136833.1|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45 	ENSMUST00000141362.1|Slc25a45|ENSMUSG00000024818.8|solute carrier family 25, member 45
mm10_v2_chr1_+_50927511_50927543	0.00158161	Ctcfl_Ctcf	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr3_+_35754121_35754135	0.00113481	Ctcfl_Ctcf	ENSMUST00000108186.1|Atp11b|ENSMUSG00000037400.10|ATPase, class VI, type 11B 	ENSMUST00000029257.8|Atp11b|ENSMUSG00000037400.10|ATPase, class VI, type 11B
mm10_v2_chr11_-_86757483_86757572	0.00099579	Ctcfl_Ctcf	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr2_+_164403194_164403219	0.000994221	Ctcfl_Ctcf	ENSMUST00000017151.1|Rbpjl|ENSMUSG00000017007.3|recombination signal binding protein for immunoglobulin kappa J region-like
mm10_v2_chr5_-_138619751_138619761	0.000929196	Ctcfl_Ctcf	ENSMUST00000085852.4|Zfp68|ENSMUSG00000058291.8|zinc finger protein 68 	ENSMUST00000110905.2|Zfp68|ENSMUSG00000058291.8|zinc finger protein 68
mm10_v2_chr2_+_32609043_32609084	0.000856575	Ctcfl_Ctcf	ENSMUST00000128811.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr1_+_16105774_16105870	0.000595413	Ctcfl_Ctcf	ENSMUST00000027053.7|Rdh10|ENSMUSG00000025921.7|retinol dehydrogenase 10 (all-trans)
mm10_v2_chr5_-_139736291_139736336	0.000229869	Ctcfl_Ctcf	ENSMUST00000044642.10|Micall2|ENSMUSG00000036718.11|MICAL-like 2
mm10_v2_chrX_+_20662898_20662909	0.000123658	Ctcfl_Ctcf	ENSMUST00000001989.8|Uba1|ENSMUSG00000001924.9|ubiquitin-like modifier activating enzyme 1
mm10_v2_chr3_-_107696462_107696574	8.46686e-05	Ctcfl_Ctcf	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
