mm10_v2_chr13_-_54399246_54399334	0.553947	Emx1_Emx2	ENSMUST00000124238.1|Gm16248|ENSMUSG00000086137.1|predicted gene 16248
mm10_v2_chr10_-_118295038_118295038	0.548778	Emx1_Emx2	ENSMUST00000163808.1|Iltifb|ENSMUSG00000090461.2|interleukin 10-related T cell-derived inducible factor beta
mm10_v2_chr13_+_23555023_23555039	0.413871	Emx1_Emx2	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr19_-_34166037_34166092	0.262575	Emx1_Emx2	ENSMUST00000025686.7|Ankrd22|ENSMUSG00000024774.9|ankyrin repeat domain 22
mm10_v2_chr9_-_118014160_118014160	0.243555	Emx1_Emx2	ENSMUST00000111769.3|Zcwpw2|ENSMUSG00000032443.9|zinc finger, CW type with PWWP domain 2
mm10_v2_chr2_+_110721340_110721490	0.233087	Emx1_Emx2	ENSMUST00000111016.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr7_-_79793788_79793788	0.222971	Emx1_Emx2	ENSMUST00000032760.5|Mesp1|ENSMUSG00000030544.5|mesoderm posterior 1
mm10_v2_chr1_-_86111970_86111984	0.1895	Emx1_Emx2	ENSMUST00000027431.6|Htr2b|ENSMUSG00000026228.6|5-hydroxytryptamine (serotonin) receptor 2B
mm10_v2_chr2_+_93452796_93452833	0.186542	Emx1_Emx2	ENSMUST00000099693.2|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000162565.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000163052.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804
mm10_v2_chr3_-_106219477_106219507	0.177741	Emx1_Emx2	ENSMUST00000082219.5|Chi3l4|ENSMUSG00000063779.5|chitinase 3-like 4
mm10_v2_chr4_+_19818722_19818743	0.174559	Emx1_Emx2	ENSMUST00000035890.7|Slc7a13|ENSMUSG00000041052.8|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13
mm10_v2_chr17_-_36032682_36032855	0.171903	Emx1_Emx2	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr14_+_25979401_25979401	0.170366	Emx1_Emx2	ENSMUST00000173580.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr14_-_96519067_96519102	0.168594	Emx1_Emx2	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chr14_+_26259109_26259109	0.158308	Emx1_Emx2	ENSMUST00000174494.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr2_+_110721587_110721619	0.15053	Emx1_Emx2	ENSMUST00000111017.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr14_+_26119173_26119173	0.148128	Emx1_Emx2	ENSMUST00000174564.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr14_+_26258786_26258786	0.148128	Emx1_Emx2	ENSMUST00000172517.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr4_+_110397661_110397708	0.147548	Emx1_Emx2	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr9_-_20728219_20728219	0.146297	Emx1_Emx2	ENSMUST00000034692.7|Olfm2|ENSMUSG00000032172.7|olfactomedin 2
mm10_v2_chr12_-_98577940_98578046	0.141678	Emx1_Emx2	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr4_+_138879360_138879399	0.137978	Emx1_Emx2	ENSMUST00000105804.1|Pla2g2e|ENSMUSG00000028751.7|phospholipase A2, group IIE
mm10_v2_chr5_-_123865491_123865518	0.134475	Emx1_Emx2	ENSMUST00000057145.5|Niacr1|ENSMUSG00000045502.5|niacin receptor 1
mm10_v2_chr17_+_45734506_45734630	0.133832	Emx1_Emx2	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr14_+_26119811_26119811	0.133333	Emx1_Emx2	ENSMUST00000173617.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr2_+_110721632_110721648	0.127388	Emx1_Emx2	ENSMUST00000090332.4|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr16_-_44016387_44016436	0.126297	Emx1_Emx2	ENSMUST00000036174.3|Gramd1c|ENSMUSG00000036292.7|GRAM domain containing 1C
mm10_v2_chr11_-_49113757_49113757	0.126082	Emx1_Emx2	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr10_+_112165676_112165676	0.120268	Emx1_Emx2	ENSMUST00000170013.1|Caps2|ENSMUSG00000035694.9|calcyphosphine 2
mm10_v2_chr4_+_150914562_150914601	0.118355	Emx1_Emx2	ENSMUST00000135169.1|Tnfrsf9|ENSMUSG00000028965.7|tumor necrosis factor receptor superfamily, member 9
mm10_v2_chr14_+_25980039_25980039	0.116835	Emx1_Emx2	ENSMUST00000173155.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr6_-_3399545_3399574	0.112121	Emx1_Emx2	ENSMUST00000120087.3|Samd9l|ENSMUSG00000047735.12|sterile alpha motif domain containing 9-like
mm10_v2_chr4_-_147642496_147642513	0.107058	Emx1_Emx2	ENSMUST00000133006.1|2610305D13Rik|ENSMUSG00000066000.6|RIKEN cDNA 2610305D13 gene 	ENSMUST00000037565.7|2610305D13Rik|ENSMUSG00000066000.6|RIKEN cDNA 2610305D13 gene 	ENSMUST00000105720.1|2610305D13Rik|ENSMUSG00000066000.6|RIKEN cDNA 2610305D13 gene
mm10_v2_chr13_-_23934156_23934225	0.104927	Emx1_Emx2	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr10_-_86011833_86011896	0.104035	Emx1_Emx2	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr18_-_38866702_38866748	0.104024	Emx1_Emx2	ENSMUST00000115582.1|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr7_-_97738222_97738317	0.103692	Emx1_Emx2	ENSMUST00000084986.6|Aqp11|ENSMUSG00000042797.8|aquaporin 11
mm10_v2_chr15_+_85510812_85510812	0.101895	Emx1_Emx2	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr19_-_8218832_8218899	0.100856	Emx1_Emx2	ENSMUST00000113298.2|Slc22a29|ENSMUSG00000075044.5|solute carrier family 22. member 29
mm10_v2_chr6_+_40442863_40442937	0.0991196	Emx1_Emx2	ENSMUST00000038907.8|Wee2|ENSMUSG00000037159.8|WEE1 homolog 2 (S. pombe) 	ENSMUST00000141490.1|Wee2|ENSMUSG00000037159.8|WEE1 homolog 2 (S. pombe)
mm10_v2_chr17_-_48432723_48432741	0.0944448	Emx1_Emx2	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr3_+_146121655_146121683	0.0857239	Emx1_Emx2	ENSMUST00000039450.4|Mcoln3|ENSMUSG00000036853.4|mucolipin 3
mm10_v2_chr6_-_129533267_129533275	0.0847627	Emx1_Emx2	ENSMUST00000181594.1|1700101I11Rik|ENSMUSG00000097675.1|RIKEN cDNA 1700101I11 gene
mm10_v2_chr1_+_60909148_60909171	0.0846752	Emx1_Emx2	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr14_+_118137101_118137178	0.0842739	Emx1_Emx2	ENSMUST00000022728.2|Gpr180|ENSMUSG00000022131.2|G protein-coupled receptor 180
mm10_v2_chr1_-_187215421_187215451	0.083511	Emx1_Emx2	ENSMUST00000110945.3|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17 	ENSMUST00000183931.1|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17 	ENSMUST00000027908.6|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17
mm10_v2_chr1_+_133610397_133610417	0.0831609	Emx1_Emx2	ENSMUST00000180718.1|Gm26706|ENSMUSG00000097014.1|predicted gene, 26706
mm10_v2_chr1_-_46030437_46030469	0.0810993	Emx1_Emx2	ENSMUST00000171707.1|Gm4776|ENSMUSG00000044457.2|predicted gene 4776 	ENSMUST00000167676.1|Gm4776|ENSMUSG00000044457.2|predicted gene 4776 	ENSMUST00000051224.1|Gm4776|ENSMUSG00000044457.2|predicted gene 4776
mm10_v2_chr17_-_78684262_78684352	0.0797253	Emx1_Emx2	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr10_-_53647080_53647080	0.0796424	Emx1_Emx2	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr11_+_109543694_109543754	0.0790841	Emx1_Emx2	ENSMUST00000106696.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr5_-_89457763_89457898	0.0775088	Emx1_Emx2	ENSMUST00000049209.8|Gc|ENSMUSG00000035540.8|group specific component
mm10_v2_chr16_-_38800193_38800209	0.0772976	Emx1_Emx2	ENSMUST00000057767.4|Upk1b|ENSMUSG00000049436.4|uroplakin 1B
mm10_v2_chr4_+_110397764_110397808	0.0770016	Emx1_Emx2	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr4_+_118961578_118961612	0.074756	Emx1_Emx2	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr11_+_121237216_121237289	0.0741764	Emx1_Emx2	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr9_-_50746501_50746597	0.0729684	Emx1_Emx2	ENSMUST00000034564.1|2310030G06Rik|ENSMUSG00000032062.1|RIKEN cDNA 2310030G06 gene
mm10_v2_chr7_-_142661858_142661880	0.0727982	Emx1_Emx2	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr1_-_144004142_144004161	0.0717674	Emx1_Emx2	ENSMUST00000127206.1|Rgs2|ENSMUSG00000026360.3|regulator of G-protein signaling 2
mm10_v2_chr6_-_116461151_116461178	0.069835	Emx1_Emx2	ENSMUST00000026795.6|Alox5|ENSMUSG00000025701.6|arachidonate 5-lipoxygenase
mm10_v2_chr7_-_48848023_48848051	0.0643902	Emx1_Emx2	ENSMUST00000032658.6|Csrp3|ENSMUSG00000030470.8|cysteine and glycine-rich protein 3
mm10_v2_chr10_+_56745134_56745134	0.0625838	Emx1_Emx2	ENSMUST00000067972.4|Gm9956|ENSMUSG00000054758.4|predicted gene 9956
mm10_v2_chr18_-_36726730_36726745	0.0623944	Emx1_Emx2	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr18_+_57142782_57142796	0.0622546	Emx1_Emx2	ENSMUST00000139892.1|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr8_+_85432686_85432686	0.0622312	Emx1_Emx2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr12_+_109545390_109545443	0.0610514	Emx1_Emx2	ENSMUST00000146701.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr12_-_84617326_84617466	0.0587815	Emx1_Emx2	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr1_-_162898484_162898498	0.058418	Emx1_Emx2	ENSMUST00000143123.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr10_-_42583628_42583639	0.0571238	Emx1_Emx2	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr3_+_127633134_127633140	0.0558576	Emx1_Emx2	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr7_+_80246375_80246429	0.0542502	Emx1_Emx2	ENSMUST00000058266.6|Ttll13|ENSMUSG00000045467.7|tubulin tyrosine ligase-like family, member 13
mm10_v2_chr2_+_110597298_110597316	0.053558	Emx1_Emx2	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr7_+_23983961_23983961	0.053519	Emx1_Emx2	ENSMUST00000077386.4|Vmn1r181|ENSMUSG00000057946.4|vomeronasal 1 receptor 181
mm10_v2_chr4_+_126609818_126609896	0.0531074	Emx1_Emx2	ENSMUST00000097886.3|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene 	ENSMUST00000164362.1|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene
mm10_v2_chr6_+_79818031_79818031	0.0524383	Emx1_Emx2	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr4_+_56743406_56743438	0.0524276	Emx1_Emx2	ENSMUST00000095079.4|Actl7a|ENSMUSG00000070979.4|actin-like 7a
mm10_v2_chr7_-_5413145_5413145	0.0517868	Emx1_Emx2	ENSMUST00000108569.2|Vmn1r58|ENSMUSG00000078808.4|vomeronasal 1 receptor 58
mm10_v2_chr1_-_144177259_144177372	0.0513144	Emx1_Emx2	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr17_-_31636631_31636790	0.0506758	Emx1_Emx2	ENSMUST00000135425.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000151718.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000155814.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase
mm10_v2_chr4_+_145670685_145670685	0.0485069	Emx1_Emx2	ENSMUST00000105738.2|Gm13242|ENSMUSG00000058186.7|predicted gene 13242
mm10_v2_chr3_-_75451818_75451818	0.0481776	Emx1_Emx2	ENSMUST00000178270.1|Wdr49|ENSMUSG00000095162.1|WD repeat domain 49
mm10_v2_chr4_+_147492417_147492417	0.0481328	Emx1_Emx2	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr18_-_15403680_15403687	0.0479186	Emx1_Emx2	ENSMUST00000079081.6|Aqp4|ENSMUSG00000024411.9|aquaporin 4
mm10_v2_chr13_+_16014457_16014475	0.0459745	Emx1_Emx2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr9_+_108648720_108648840	0.0445424	Emx1_Emx2	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr18_-_66002612_66002637	0.0441559	Emx1_Emx2	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr10_-_39163794_39163794	0.0438413	Emx1_Emx2	ENSMUST00000076713.4|Wisp3|ENSMUSG00000062074.6|WNT1 inducible signaling pathway protein 3
mm10_v2_chr6_-_40951826_40951826	0.0432356	Emx1_Emx2	ENSMUST00000073642.5|Gm4744|ENSMUSG00000063252.5|predicted gene 4744
mm10_v2_chr18_-_6241486_6241550	0.0432312	Emx1_Emx2	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr13_+_94976435_94976452	0.0424732	Emx1_Emx2	ENSMUST00000160409.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000159647.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000167155.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41
mm10_v2_chr14_-_57133585_57133618	0.0415514	Emx1_Emx2	ENSMUST00000039380.8|Gjb6|ENSMUSG00000040055.8|gap junction protein, beta 6
mm10_v2_chr7_-_143649614_143649671	0.0414948	Emx1_Emx2	ENSMUST00000129476.1|Tnfrsf22|ENSMUSG00000010751.8|tumor necrosis factor receptor superfamily, member 22 	ENSMUST00000084396.3|Tnfrsf22|ENSMUSG00000010751.8|tumor necrosis factor receptor superfamily, member 22 	ENSMUST00000075588.6|Tnfrsf22|ENSMUSG00000010751.8|tumor necrosis factor receptor superfamily, member 22 	ENSMUST00000146692.1|Tnfrsf22|ENSMUSG00000010751.8|tumor necrosis factor receptor superfamily, member 22
mm10_v2_chr10_+_102158858_102158889	0.0412908	Emx1_Emx2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr3_+_88716884_88716906	0.0411863	Emx1_Emx2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr10_+_102159000_102159079	0.0404881	Emx1_Emx2	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr18_-_6241470_6241482	0.0397468	Emx1_Emx2	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr2_-_157566319_157566361	0.0391369	Emx1_Emx2	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr7_+_132610620_132610662	0.037687	Emx1_Emx2	ENSMUST00000033241.5|Lhpp|ENSMUSG00000030946.6|phospholysine phosphohistidine inorganic pyrophosphate phosphatase
mm10_v2_chr6_-_116461024_116461140	0.0371005	Emx1_Emx2	ENSMUST00000164547.1|Alox5|ENSMUSG00000025701.6|arachidonate 5-lipoxygenase 	ENSMUST00000170186.1|Alox5|ENSMUSG00000025701.6|arachidonate 5-lipoxygenase
mm10_v2_chr10_+_90071095_90071117	0.0369108	Emx1_Emx2	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_+_175469985_175470063	0.0366229	Emx1_Emx2	ENSMUST00000109042.3|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109002.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109043.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000143490.1|Gm8923|ENSMUSG00000078896.5|predicted gene 8923
mm10_v2_chr4_+_146502027_146502027	0.0362591	Emx1_Emx2	ENSMUST00000105735.2|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr5_+_108369858_108369858	0.0359124	Emx1_Emx2	ENSMUST00000100944.2|Gm10419|ENSMUSG00000072769.2|predicted gene 10419
mm10_v2_chr10_-_28986280_28986313	0.0356244	Emx1_Emx2	ENSMUST00000152363.1|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene 	ENSMUST00000015663.6|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene
mm10_v2_chr4_+_147021850_147021850	0.0354638	Emx1_Emx2	ENSMUST00000075775.5|Rex2|ENSMUSG00000067919.8|reduced expression 2
mm10_v2_chrX_+_56786527_56786564	0.035422	Emx1_Emx2	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr8_+_81773105_81773120	0.0352284	Emx1_Emx2	ENSMUST00000170160.1|Inpp4b|ENSMUSG00000037940.9|inositol polyphosphate-4-phosphatase, type II
mm10_v2_chr9_-_124304718_124304718	0.0351926	Emx1_Emx2	ENSMUST00000071300.6|2010315B03Rik|ENSMUSG00000074829.4|RIKEN cDNA 2010315B03 gene
mm10_v2_chr19_+_34100943_34100983	0.0348251	Emx1_Emx2	ENSMUST00000025685.6|Lipm|ENSMUSG00000056078.5|lipase, family member M
mm10_v2_chr6_-_144209448_144209469	0.0344031	Emx1_Emx2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr6_+_37870786_37870882	0.0343891	Emx1_Emx2	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr9_-_77399308_77399418	0.0324688	Emx1_Emx2	ENSMUST00000183878.1|RP23-264N13.2|ENSMUSG00000099170.1|RP23-264N13.2
mm10_v2_chr10_+_52022502_52022534	0.0309722	Emx1_Emx2	ENSMUST00000163017.1|Vgll2|ENSMUSG00000049641.6|vestigial like 2 homolog (Drosophila) 	ENSMUST00000058347.4|Vgll2|ENSMUSG00000049641.6|vestigial like 2 homolog (Drosophila)
mm10_v2_chr16_-_16829276_16829349	0.0285627	Emx1_Emx2	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr2_+_69789647_69789749	0.0272622	Emx1_Emx2	ENSMUST00000112266.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr4_+_83417715_83417758	0.0272366	Emx1_Emx2	ENSMUST00000030206.3|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3 	ENSMUST00000071544.4|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3
mm10_v2_chr4_-_117765550_117765648	0.0269228	Emx1_Emx2	ENSMUST00000062747.5|Klf17|ENSMUSG00000048626.5|Kruppel-like factor 17
mm10_v2_chr7_+_28810886_28810918	0.0268182	Emx1_Emx2	ENSMUST00000038572.8|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chr14_-_8258800_8258832	0.0267843	Emx1_Emx2	ENSMUST00000022271.7|Acox2|ENSMUSG00000021751.7|acyl-Coenzyme A oxidase 2, branched chain
mm10_v2_chr12_+_80463095_80463179	0.0267019	Emx1_Emx2	ENSMUST00000038185.8|Exd2|ENSMUSG00000032705.8|exonuclease 3'-5' domain containing 2
mm10_v2_chr6_+_17749170_17749265	0.0264976	Emx1_Emx2	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr6_-_13871477_13871518	0.0262231	Emx1_Emx2	ENSMUST00000139231.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr6_+_66896480_66896549	0.0261379	Emx1_Emx2	ENSMUST00000114222.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr8_+_45507768_45507818	0.0261	Emx1_Emx2	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_-_144209471_144209487	0.0260124	Emx1_Emx2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr1_-_23909687_23909706	0.0259326	Emx1_Emx2	ENSMUST00000129254.1|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr6_-_144209558_144209647	0.0259199	Emx1_Emx2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_+_30171486_30171497	0.0259158	Emx1_Emx2	ENSMUST00000015481.5|Endog|ENSMUSG00000015337.5|endonuclease G
mm10_v2_chr14_+_69347587_69347587	0.0254932	Emx1_Emx2	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chrX_-_150814265_150814345	0.025427	Emx1_Emx2	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr6_-_13871459_13871471	0.0249247	Emx1_Emx2	ENSMUST00000155856.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr8_+_34054622_34054647	0.0248757	Emx1_Emx2	ENSMUST00000149618.1|Gm9951|ENSMUSG00000054618.8|predicted gene 9951
mm10_v2_chr8_-_8690493_8690538	0.0238542	Emx1_Emx2	ENSMUST00000048545.8|Arglu1|ENSMUSG00000040459.10|arginine and glutamate rich 1
mm10_v2_chr11_+_5788480_5788560	0.0232591	Emx1_Emx2	ENSMUST00000109845.1|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000020769.7|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000102928.4|Dbnl|ENSMUSG00000020476.8|drebrin-like
mm10_v2_chr17_+_14943184_14943281	0.0227333	Emx1_Emx2	ENSMUST00000052691.8|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000164837.2|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000174004.1|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene
mm10_v2_chr1_+_88306731_88306759	0.0224284	Emx1_Emx2	ENSMUST00000040210.7|Trpm8|ENSMUSG00000036251.10|transient receptor potential cation channel, subfamily M, member 8
mm10_v2_chr19_-_55241236_55241236	0.0218639	Emx1_Emx2	ENSMUST00000069183.6|Gucy2g|ENSMUSG00000055523.6|guanylate cyclase 2g
mm10_v2_chr4_+_146156824_146156824	0.0217684	Emx1_Emx2	ENSMUST00000168483.2|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr10_+_128322443_128322476	0.0208666	Emx1_Emx2	ENSMUST00000026446.2|Cnpy2|ENSMUSG00000025381.2|canopy 2 homolog (zebrafish)
mm10_v2_chr5_-_5266038_5266292	0.0207378	Emx1_Emx2	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr12_+_111971545_111971598	0.0202489	Emx1_Emx2	ENSMUST00000079009.5|Tdrd9|ENSMUSG00000054003.8|tudor domain containing 9
mm10_v2_chrX_-_134111708_134111788	0.0202481	Emx1_Emx2	ENSMUST00000159259.1|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1 	ENSMUST00000113275.3|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr2_-_37647199_37647285	0.0198678	Emx1_Emx2	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr10_+_79996479_79996505	0.0184844	Emx1_Emx2	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr10_+_101681487_101681662	0.0183664	Emx1_Emx2	ENSMUST00000179929.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000127504.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr1_-_40085823_40085862	0.0180272	Emx1_Emx2	ENSMUST00000181756.1|Gm16894|ENSMUSG00000097899.1|predicted gene, 16894
mm10_v2_chr15_+_99295087_99295279	0.01798	Emx1_Emx2	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr6_+_66896397_66896479	0.0179791	Emx1_Emx2	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr13_-_58354862_58354862	0.0179686	Emx1_Emx2	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr6_+_42245907_42245977	0.0177552	Emx1_Emx2	ENSMUST00000031897.5|Gstk1|ENSMUSG00000029864.5|glutathione S-transferase kappa 1
mm10_v2_chr6_-_89595647_89595658	0.01772	Emx1_Emx2	ENSMUST00000032172.8|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6 	ENSMUST00000113550.3|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6
mm10_v2_chr3_+_88716838_88716883	0.0175082	Emx1_Emx2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr17_-_56036546_56036647	0.0173716	Emx1_Emx2	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr3_+_108571699_108571699	0.0168436	Emx1_Emx2	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr14_-_104522615_104522707	0.0166513	Emx1_Emx2	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr18_-_73754457_73754503	0.0165689	Emx1_Emx2	ENSMUST00000041138.2|Elac1|ENSMUSG00000036941.2|elaC homolog 1 (E. coli)
mm10_v2_chrX_-_74393003_74393072	0.0162585	Emx1_Emx2	ENSMUST00000015427.6|Fam3a|ENSMUSG00000031399.9|family with sequence similarity 3, member A
mm10_v2_chr3_+_137341067_137341095	0.0157416	Emx1_Emx2	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr5_-_86518562_86518577	0.0154853	Emx1_Emx2	ENSMUST00000140095.1|Tmprss11g|ENSMUSG00000079451.3|transmembrane protease, serine 11g
mm10_v2_chr2_-_156392829_156392993	0.0152342	Emx1_Emx2	ENSMUST00000088578.2|2900097C17Rik|ENSMUSG00000067833.2|RIKEN cDNA 2900097C17 gene
mm10_v2_chrX_+_106027259_106027293	0.0145943	Emx1_Emx2	ENSMUST00000113557.1|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr11_+_97029925_97029997	0.0145717	Emx1_Emx2	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr6_-_101377342_101377388	0.0144357	Emx1_Emx2	ENSMUST00000151175.1|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr12_-_98259416_98259459	0.0139779	Emx1_Emx2	ENSMUST00000021390.7|Galc|ENSMUSG00000021003.9|galactosylceramidase
mm10_v2_chr7_+_43672003_43672040	0.0138681	Emx1_Emx2	ENSMUST00000038332.8|Ctu1|ENSMUSG00000038888.8|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm10_v2_chrX_+_159303266_159303281	0.013399	Emx1_Emx2	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chrX_+_106027300_106027323	0.0132295	Emx1_Emx2	ENSMUST00000055941.6|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr15_+_80711292_80711340	0.0131446	Emx1_Emx2	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr7_+_126976338_126976400	0.0127195	Emx1_Emx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr11_-_42000284_42000356	0.0124572	Emx1_Emx2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr8_-_125898291_125898322	0.0124196	Emx1_Emx2	ENSMUST00000047239.6|Pcnxl2|ENSMUSG00000060212.7|pecanex-like 2 (Drosophila)
mm10_v2_chr12_-_87388317_87388355	0.012097	Emx1_Emx2	ENSMUST00000021424.4|Sptlc2|ENSMUSG00000021036.4|serine palmitoyltransferase, long chain base subunit 2
mm10_v2_chr3_+_137341103_137341146	0.0118582	Emx1_Emx2	ENSMUST00000119475.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr5_+_121749196_121749196	0.0114026	Emx1_Emx2	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr8_+_45934610_45934661	0.0104155	Emx1_Emx2	ENSMUST00000095326.3|Ccdc110|ENSMUSG00000071104.3|coiled-coil domain containing 110
mm10_v2_chr17_+_29274078_29274129	0.0103298	Emx1_Emx2	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr6_+_114458519_114458519	0.0103249	Emx1_Emx2	ENSMUST00000160780.1|Hrh1|ENSMUSG00000053004.8|histamine receptor H1
mm10_v2_chr1_+_163779575_163779592	0.0102591	Emx1_Emx2	ENSMUST00000027877.6|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3 	ENSMUST00000077642.5|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3
mm10_v2_chr9_+_51115999_51116006	0.00987396	Emx1_Emx2	ENSMUST00000114431.2|Btg4|ENSMUSG00000032056.9|B cell translocation gene 4
mm10_v2_chr10_+_81183000_81183048	0.00956064	Emx1_Emx2	ENSMUST00000178422.1|Dapk3|ENSMUSG00000034974.6|death-associated protein kinase 3
mm10_v2_chr3_+_121531603_121531634	0.00953812	Emx1_Emx2	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr5_-_121502980_121502980	0.00944328	Emx1_Emx2	ENSMUST00000079368.3|Adam1b|ENSMUSG00000062438.3|a disintegrin and metallopeptidase domain 1b
mm10_v2_chr1_+_75521521_75521602	0.00834323	Emx1_Emx2	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr17_+_46772635_46772635	0.00782475	Emx1_Emx2	ENSMUST00000071430.5|2310039H08Rik|ENSMUSG00000062619.5|RIKEN cDNA 2310039H08 gene
mm10_v2_chr2_-_28583239_28583279	0.00739866	Emx1_Emx2	ENSMUST00000028157.8|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
mm10_v2_chr7_-_115846080_115846112	0.00696806	Emx1_Emx2	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr11_+_6560183_6560240	0.00694302	Emx1_Emx2	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chrX_-_8193387_8193512	0.00665495	Emx1_Emx2	ENSMUST00000143223.1|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein 	ENSMUST00000033509.8|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm10_v2_chr7_+_129591859_129591871	0.00657079	Emx1_Emx2	ENSMUST00000084519.5|Wdr11|ENSMUSG00000042055.7|WD repeat domain 11
mm10_v2_chr13_-_4609122_4609189	0.00647533	Emx1_Emx2	ENSMUST00000110691.3|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1 	ENSMUST00000091848.5|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1
mm10_v2_chr7_-_84679346_84679401	0.00647332	Emx1_Emx2	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr1_+_58113136_58113184	0.00636002	Emx1_Emx2	ENSMUST00000040999.7|Aox3|ENSMUSG00000064294.6|aldehyde oxidase 3
mm10_v2_chr2_+_175372436_175372492	0.00503426	Emx1_Emx2	ENSMUST00000131676.1|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109048.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109047.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723
mm10_v2_chr1_-_184999549_184999549	0.00414606	Emx1_Emx2	ENSMUST00000027929.4|Mark1|ENSMUSG00000026620.6|MAP/microtubule affinity-regulating kinase 1
mm10_v2_chrX_-_160138375_160138435	0.00410134	Emx1_Emx2	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr12_+_84285232_84285414	0.00349528	Emx1_Emx2	ENSMUST00000123614.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000147363.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000135001.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000146377.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2
mm10_v2_chr2_+_151494182_151494203	0.00310553	Emx1_Emx2	ENSMUST00000089140.6|Nsfl1c|ENSMUSG00000027455.10|NSFL1 (p97) cofactor (p47)
mm10_v2_chr6_+_129533183_129533205	0.00268983	Emx1_Emx2	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr19_+_34217588_34217624	0.00258226	Emx1_Emx2	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr4_+_146161909_146161909	0.00223019	Emx1_Emx2	ENSMUST00000131932.1|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr5_+_135009152_135009317	0.0019488	Emx1_Emx2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chr15_-_36496722_36496808	0.00191193	Emx1_Emx2	ENSMUST00000057486.7|Ankrd46|ENSMUSG00000048307.7|ankyrin repeat domain 46
mm10_v2_chr18_-_34579072_34579130	0.00183648	Emx1_Emx2	ENSMUST00000079287.5|Nme5|ENSMUSG00000035984.8|NME/NM23 family member 5
mm10_v2_chr15_-_33687840_33687883	0.00183504	Emx1_Emx2	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr2_-_34826187_34826240	0.00171979	Emx1_Emx2	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr17_-_24479034_24479083	0.00170236	Emx1_Emx2	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr3_+_121531653_121531678	0.000969181	Emx1_Emx2	ENSMUST00000181070.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr17_-_32822200_32822200	0.00084533	Emx1_Emx2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr2_+_74721978_74722074	0.000715606	Emx1_Emx2	ENSMUST00000047904.3|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr10_-_49783259_49783582	0.000535079	Emx1_Emx2	ENSMUST00000105484.3|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105486.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000079751.2|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105485.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr2_-_28583189_28583230	0.000278871	Emx1_Emx2	ENSMUST00000113889.2|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
