mm10_v2_chr4_-_117178726_117178754	0.932333	Foxk1_Foxj1	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr7_+_140968028_140968047	0.784586	Foxk1_Foxj1	ENSMUST00000106040.1|Ifitm1|ENSMUSG00000025491.8|interferon induced transmembrane protein 1 	ENSMUST00000026564.8|Ifitm1|ENSMUSG00000025491.8|interferon induced transmembrane protein 1
mm10_v2_chr3_-_106167564_106167564	0.711825	Foxk1_Foxj1	ENSMUST00000063062.8|Chi3l3|ENSMUSG00000040809.10|chitinase 3-like 3
mm10_v2_chr3_+_159495408_159495458	0.673107	Foxk1_Foxj1	ENSMUST00000120272.1|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a 	ENSMUST00000029825.7|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a 	ENSMUST00000106041.2|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a
mm10_v2_chr6_-_83536215_83536265	0.595902	Foxk1_Foxj1	ENSMUST00000075161.5|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr5_-_107687990_107688025	0.521795	Foxk1_Foxj1	ENSMUST00000180428.1|Gm26692|ENSMUSG00000097035.1|predicted gene, 26692
mm10_v2_chr10_+_4611971_4612021	0.508187	Foxk1_Foxj1	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr7_+_19518731_19518731	0.474719	Foxk1_Foxj1	ENSMUST00000078908.4|Nkpd1|ENSMUSG00000060621.4|NTPase, KAP family P-loop domain containing 1
mm10_v2_chrX_-_162964557_162964599	0.47041	Foxk1_Foxj1	ENSMUST00000038769.2|S100g|ENSMUSG00000040808.4|S100 calcium binding protein G
mm10_v2_chr19_-_34255325_34255342	0.454702	Foxk1_Foxj1	ENSMUST00000039631.8|Acta2|ENSMUSG00000035783.8|actin, alpha 2, smooth muscle, aorta
mm10_v2_chr5_+_30666886_30666963	0.437981	Foxk1_Foxj1	ENSMUST00000144742.1|Cenpa|ENSMUSG00000029177.3|centromere protein A
mm10_v2_chr1_+_136467958_136467958	0.417886	Foxk1_Foxj1	ENSMUST00000047817.6|Kif14|ENSMUSG00000041498.7|kinesin family member 14
mm10_v2_chr16_+_17146937_17146985	0.399443	Foxk1_Foxj1	ENSMUST00000115706.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial) 	ENSMUST00000069064.4|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr14_-_57826128_57826180	0.387221	Foxk1_Foxj1	ENSMUST00000022536.2|Ska3|ENSMUSG00000021965.2|spindle and kinetochore associated complex subunit 3
mm10_v2_chr19_+_37376359_37376422	0.375714	Foxk1_Foxj1	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr7_+_141476374_141476400	0.362748	Foxk1_Foxj1	ENSMUST00000117634.1|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr6_-_40999479_40999498	0.360194	Foxk1_Foxj1	ENSMUST00000166306.1|Gm2663|ENSMUSG00000096525.1|predicted gene 2663
mm10_v2_chr3_-_27896360_27896390	0.355291	Foxk1_Foxj1	ENSMUST00000058077.3|Tmem212|ENSMUSG00000043164.3|transmembrane protein 212
mm10_v2_chr12_-_84400851_84400900	0.352476	Foxk1_Foxj1	ENSMUST00000117286.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr19_+_53329413_53329478	0.35071	Foxk1_Foxj1	ENSMUST00000025998.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr10_+_127705170_127705170	0.344787	Foxk1_Foxj1	ENSMUST00000079590.5|Myo1a|ENSMUSG00000025401.8|myosin IA
mm10_v2_chr5_-_135251209_135251242	0.340681	Foxk1_Foxj1	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr10_+_88091070_88091076	0.334316	Foxk1_Foxj1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr19_+_44992127_44992136	0.330494	Foxk1_Foxj1	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr4_-_144408397_144408464	0.30948	Foxk1_Foxj1	ENSMUST00000123854.1|Pramef12|ENSMUSG00000028591.5|PRAME family member 12 	ENSMUST00000030326.3|Pramef12|ENSMUSG00000028591.5|PRAME family member 12
mm10_v2_chr3_-_100969644_100969676	0.306871	Foxk1_Foxj1	ENSMUST00000076941.5|Ttf2|ENSMUSG00000033222.10|transcription termination factor, RNA polymerase II
mm10_v2_chr5_+_150522599_150522637	0.298802	Foxk1_Foxj1	ENSMUST00000044620.7|Brca2|ENSMUSG00000041147.7|breast cancer 2
mm10_v2_chr4_-_43499608_43499695	0.296628	Foxk1_Foxj1	ENSMUST00000136005.1|Arhgef39|ENSMUSG00000051517.8|Rho guanine nucleotide exchange factor (GEF) 39 	ENSMUST00000054538.6|Arhgef39|ENSMUSG00000051517.8|Rho guanine nucleotide exchange factor (GEF) 39
mm10_v2_chr8_-_53638945_53639065	0.289457	Foxk1_Foxj1	ENSMUST00000047768.4|Neil3|ENSMUSG00000039396.4|nei like 3 (E. coli)
mm10_v2_chr8_-_84773381_84773427	0.284096	Foxk1_Foxj1	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr12_-_84400929_84400946	0.277726	Foxk1_Foxj1	ENSMUST00000122194.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr3_-_59210881_59210883	0.260213	Foxk1_Foxj1	ENSMUST00000040622.1|P2ry13|ENSMUSG00000036362.1|purinergic receptor P2Y, G-protein coupled 13
mm10_v2_chr8_-_70523085_70523279	0.259858	Foxk1_Foxj1	ENSMUST00000137610.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000121623.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000093456.5|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000118850.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr2_+_119047116_119047121	0.251569	Foxk1_Foxj1	ENSMUST00000152380.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000099542.2|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr1_+_164312879_164312879	0.23861	Foxk1_Foxj1	ENSMUST00000086028.5|Nme7|ENSMUSG00000026575.10|NME/NM23 family member 7
mm10_v2_chr10_+_127677064_127677099	0.237018	Foxk1_Foxj1	ENSMUST00000118612.1|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194 	ENSMUST00000048099.4|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194
mm10_v2_chr5_+_110330697_110330767	0.231207	Foxk1_Foxj1	ENSMUST00000112481.1|Pole|ENSMUSG00000007080.8|polymerase (DNA directed), epsilon
mm10_v2_chr18_+_4993795_4993819	0.229119	Foxk1_Foxj1	ENSMUST00000153016.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr17_-_12868126_12868148	0.224585	Foxk1_Foxj1	ENSMUST00000089015.3|Mas1|ENSMUSG00000068037.4|MAS1 oncogene
mm10_v2_chr6_+_8520008_8520058	0.219988	Foxk1_Foxj1	ENSMUST00000162567.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1 	ENSMUST00000161217.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1
mm10_v2_chr10_-_41303171_41303250	0.211372	Foxk1_Foxj1	ENSMUST00000043814.3|Fig4|ENSMUSG00000038417.3|FIG4 homolog (S. cerevisiae)
mm10_v2_chr2_+_119047129_119047159	0.209556	Foxk1_Foxj1	ENSMUST00000153300.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000028799.5|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr2_+_164486455_164486655	0.209361	Foxk1_Foxj1	ENSMUST00000069385.8|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2 	ENSMUST00000143690.1|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr4_-_82885148_82885148	0.208233	Foxk1_Foxj1	ENSMUST00000048430.3|Cer1|ENSMUSG00000038192.5|cerberus 1 homolog (Xenopus laevis)
mm10_v2_chr14_-_62456286_62456289	0.206455	Foxk1_Foxj1	ENSMUST00000165651.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2 	ENSMUST00000022501.3|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr1_-_157256682_157256701	0.201051	Foxk1_Foxj1	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr3_+_126363827_126363827	0.196679	Foxk1_Foxj1	ENSMUST00000093976.2|Arsj|ENSMUSG00000046561.8|arylsulfatase J
mm10_v2_chr14_+_30879257_30879327	0.193791	Foxk1_Foxj1	ENSMUST00000040715.6|Mustn1|ENSMUSG00000042485.6|musculoskeletal, embryonic nuclear protein 1
mm10_v2_chr6_-_115037824_115037881	0.193473	Foxk1_Foxj1	ENSMUST00000174848.1|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 	ENSMUST00000032461.5|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
mm10_v2_chr10_-_81230773_81230833	0.190777	Foxk1_Foxj1	ENSMUST00000047408.4|Atcay|ENSMUSG00000034958.5|ataxia, cerebellar, Cayman type homolog (human)
mm10_v2_chr9_-_48835932_48835962	0.189927	Foxk1_Foxj1	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr17_+_28530834_28530879	0.186845	Foxk1_Foxj1	ENSMUST00000025060.2|Armc12|ENSMUSG00000024223.2|armadillo repeat containing 12
mm10_v2_chr8_-_41215146_41215168	0.179938	Foxk1_Foxj1	ENSMUST00000034003.4|Fgl1|ENSMUSG00000031594.9|fibrinogen-like protein 1
mm10_v2_chr15_-_103310425_103310444	0.178594	Foxk1_Foxj1	ENSMUST00000079824.4|Gpr84|ENSMUSG00000063234.4|G protein-coupled receptor 84
mm10_v2_chr7_+_82175156_82175199	0.178551	Foxk1_Foxj1	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr2_+_68117713_68117713	0.176155	Foxk1_Foxj1	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr11_-_34833631_34833663	0.175378	Foxk1_Foxj1	ENSMUST00000093191.2|Spdl1|ENSMUSG00000069910.2|spindle apparatus coiled-coil protein 1
mm10_v2_chr10_-_51631458_51631458	0.174405	Foxk1_Foxj1	ENSMUST00000020062.3|Gprc6a|ENSMUSG00000019905.7|G protein-coupled receptor, family C, group 6, member A
mm10_v2_chr4_-_137785371_137785516	0.173309	Foxk1_Foxj1	ENSMUST00000133473.1|Alpl|ENSMUSG00000028766.4|alkaline phosphatase, liver/bone/kidney
mm10_v2_chr17_-_7827289_7827310	0.170399	Foxk1_Foxj1	ENSMUST00000167580.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1 	ENSMUST00000169126.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1
mm10_v2_chr18_+_14706145_14706232	0.169468	Foxk1_Foxj1	ENSMUST00000040860.1|Psma8|ENSMUSG00000036743.3|proteasome (prosome, macropain) subunit, alpha type, 8
mm10_v2_chr1_-_179546261_179546276	0.168832	Foxk1_Foxj1	ENSMUST00000027769.5|Tfb2m|ENSMUSG00000026492.5|transcription factor B2, mitochondrial
mm10_v2_chr1_+_66386968_66386999	0.167377	Foxk1_Foxj1	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr2_+_164486856_164486898	0.16539	Foxk1_Foxj1	ENSMUST00000109349.2|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr8_+_58912257_58912257	0.162703	Foxk1_Foxj1	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr4_+_154869585_154869636	0.161489	Foxk1_Foxj1	ENSMUST00000079269.7|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000163732.1|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000080559.6|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1
mm10_v2_chrX_+_56786527_56786564	0.158866	Foxk1_Foxj1	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr2_+_12924041_12924113	0.157613	Foxk1_Foxj1	ENSMUST00000134794.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000028063.4|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000154269.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000114796.3|Pter|ENSMUSG00000026730.6|phosphotriesterase related
mm10_v2_chr14_+_4871156_4871156	0.15653	Foxk1_Foxj1	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr12_-_71136611_71136701	0.15622	Foxk1_Foxj1	ENSMUST00000021486.8|Timm9|ENSMUSG00000021079.9|translocase of inner mitochondrial membrane 9 	ENSMUST00000166120.1|Timm9|ENSMUSG00000021079.9|translocase of inner mitochondrial membrane 9
mm10_v2_chr9_-_98601642_98601679	0.154007	Foxk1_Foxj1	ENSMUST00000035034.8|Mrps22|ENSMUSG00000032459.8|mitochondrial ribosomal protein S22
mm10_v2_chr10_+_18469958_18469981	0.152875	Foxk1_Foxj1	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr6_-_59024470_59024549	0.151974	Foxk1_Foxj1	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr15_-_78855517_78855536	0.150288	Foxk1_Foxj1	ENSMUST00000044584.4|Lgals2|ENSMUSG00000043501.4|lectin, galactose-binding, soluble 2
mm10_v2_chr16_+_22920222_22920266	0.147995	Foxk1_Foxj1	ENSMUST00000023587.4|Fetub|ENSMUSG00000022871.6|fetuin beta 	ENSMUST00000116625.2|Fetub|ENSMUSG00000022871.6|fetuin beta
mm10_v2_chr2_-_65529275_65529404	0.14644	Foxk1_Foxj1	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr4_+_11191354_11191424	0.144064	Foxk1_Foxj1	ENSMUST00000170901.1|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr3_-_101287897_101287957	0.142926	Foxk1_Foxj1	ENSMUST00000029456.4|Cd2|ENSMUSG00000027863.8|CD2 antigen
mm10_v2_chr13_+_43370710_43370710	0.14004	Foxk1_Foxj1	ENSMUST00000066804.4|Sirt5|ENSMUSG00000054021.5|sirtuin 5
mm10_v2_chr9_-_58741543_58741580	0.138648	Foxk1_Foxj1	ENSMUST00000098674.4|2410076I21Rik|ENSMUSG00000074269.4|RIKEN cDNA 2410076I21 gene
mm10_v2_chr13_+_60602182_60602231	0.137585	Foxk1_Foxj1	ENSMUST00000044083.7|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr13_-_95478655_95478655	0.136906	Foxk1_Foxj1	ENSMUST00000022186.3|S100z|ENSMUSG00000021679.3|S100 calcium binding protein, zeta
mm10_v2_chr2_-_104028287_104028337	0.134624	Foxk1_Foxj1	ENSMUST00000056170.3|4931422A03Rik|ENSMUSG00000046085.7|RIKEN cDNA 4931422A03 gene
mm10_v2_chr5_-_21785115_21785251	0.134227	Foxk1_Foxj1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr1_+_34005872_34005908	0.13165	Foxk1_Foxj1	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr3_+_53488677_53488727	0.131563	Foxk1_Foxj1	ENSMUST00000029307.3|Stoml3|ENSMUSG00000027744.3|stomatin (Epb7.2)-like 3
mm10_v2_chr5_-_138172383_138172422	0.131489	Foxk1_Foxj1	ENSMUST00000000505.9|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr2_-_41789078_41789078	0.130556	Foxk1_Foxj1	ENSMUST00000167270.2|Lrp1b|ENSMUSG00000049252.11|low density lipoprotein-related protein 1B (deleted in tumors)
mm10_v2_chr3_+_68584154_68584181	0.128564	Foxk1_Foxj1	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr3_-_144932523_144932536	0.128201	Foxk1_Foxj1	ENSMUST00000098549.3|AI747448|ENSMUSG00000074195.3|expressed sequence AI747448
mm10_v2_chr3_-_101287879_101287893	0.128098	Foxk1_Foxj1	ENSMUST00000152321.1|Cd2|ENSMUSG00000027863.8|CD2 antigen
mm10_v2_chr16_+_21891969_21891969	0.127632	Foxk1_Foxj1	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr15_-_77022632_77022787	0.127357	Foxk1_Foxj1	ENSMUST00000019037.8|Mb|ENSMUSG00000018893.8|myoglobin 	ENSMUST00000169226.1|Mb|ENSMUSG00000018893.8|myoglobin
mm10_v2_chr14_+_4514758_4514758	0.125941	Foxk1_Foxj1	ENSMUST00000112776.2|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr11_+_43151599_43151599	0.125571	Foxk1_Foxj1	ENSMUST00000077659.5|Atp10b|ENSMUSG00000055415.7|ATPase, class V, type 10B
mm10_v2_chr16_-_38433145_38433175	0.121588	Foxk1_Foxj1	ENSMUST00000002926.6|Pla1a|ENSMUSG00000002847.6|phospholipase A1 member A
mm10_v2_chr5_+_65934922_65935006	0.120921	Foxk1_Foxj1	ENSMUST00000153624.1|Chrna9|ENSMUSG00000029205.6|cholinergic receptor, nicotinic, alpha polypeptide 9
mm10_v2_chrX_+_166344692_166344770	0.120571	Foxk1_Foxj1	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr17_+_46496753_46496809	0.120375	Foxk1_Foxj1	ENSMUST00000046497.6|Dnph1|ENSMUSG00000040658.6|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
mm10_v2_chr2_-_80128834_80128996	0.120222	Foxk1_Foxj1	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr12_-_103443653_103443680	0.118991	Foxk1_Foxj1	ENSMUST00000055071.8|Ifi27l2a|ENSMUSG00000079017.3|interferon, alpha-inducible protein 27 like 2A
mm10_v2_chr3_+_94398517_94398538	0.118616	Foxk1_Foxj1	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr14_-_6741430_6741430	0.118607	Foxk1_Foxj1	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr4_-_87806276_87806294	0.117056	Foxk1_Foxj1	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr2_-_64975762_64975795	0.116676	Foxk1_Foxj1	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr8_+_75109528_75109601	0.1166	Foxk1_Foxj1	ENSMUST00000164309.1|Mcm5|ENSMUSG00000005410.5|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)
mm10_v2_chr16_-_34263179_34263208	0.116051	Foxk1_Foxj1	ENSMUST00000114949.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114954.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr19_+_39060998_39061015	0.114989	Foxk1_Foxj1	ENSMUST00000087236.4|Cyp2c65|ENSMUSG00000067231.4|cytochrome P450, family 2, subfamily c, polypeptide 65
mm10_v2_chr19_-_9135603_9135636	0.114864	Foxk1_Foxj1	ENSMUST00000049948.5|Asrgl1|ENSMUSG00000024654.8|asparaginase like 1
mm10_v2_chr6_-_112696604_112696686	0.114847	Foxk1_Foxj1	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr12_-_103657159_103657212	0.11362	Foxk1_Foxj1	ENSMUST00000044159.6|Serpina6|ENSMUSG00000060807.7|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm10_v2_chr18_+_21072329_21072351	0.11298	Foxk1_Foxj1	ENSMUST00000082235.4|Mep1b|ENSMUSG00000024313.7|meprin 1 beta
mm10_v2_chr5_-_151651216_151651242	0.111378	Foxk1_Foxj1	ENSMUST00000038131.9|Rfc3|ENSMUSG00000033970.9|replication factor C (activator 1) 3
mm10_v2_chr16_+_65815508_65815633	0.111323	Foxk1_Foxj1	ENSMUST00000168064.1|Vgll3|ENSMUSG00000091243.1|vestigial like 3 (Drosophila)
mm10_v2_chr6_+_56956466_56956466	0.111262	Foxk1_Foxj1	ENSMUST00000096612.3|Vmn1r4|ENSMUSG00000071893.4|vomeronasal 1 receptor 4
mm10_v2_chr18_-_43373248_43373272	0.110913	Foxk1_Foxj1	ENSMUST00000118043.1|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr13_+_4574075_4574088	0.109409	Foxk1_Foxj1	ENSMUST00000021628.3|Akr1c21|ENSMUSG00000021207.8|aldo-keto reductase family 1, member C21
mm10_v2_chr1_+_20917856_20917874	0.108094	Foxk1_Foxj1	ENSMUST00000167119.1|Paqr8|ENSMUSG00000025931.9|progestin and adipoQ receptor family member VIII
mm10_v2_chr2_-_79908428_79908438	0.10797	Foxk1_Foxj1	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr14_+_5164535_5164535	0.10783	Foxk1_Foxj1	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr6_+_42264983_42265032	0.107383	Foxk1_Foxj1	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr14_+_5517172_5517172	0.106784	Foxk1_Foxj1	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr3_+_129532386_129532440	0.105567	Foxk1_Foxj1	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr1_+_34439851_34439910	0.104887	Foxk1_Foxj1	ENSMUST00000027303.7|Imp4|ENSMUSG00000026127.7|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm10_v2_chr4_-_116167591_116167607	0.10395	Foxk1_Foxj1	ENSMUST00000030465.3|Tspan1|ENSMUSG00000028699.3|tetraspanin 1 	ENSMUST00000143426.1|Tspan1|ENSMUSG00000028699.3|tetraspanin 1
mm10_v2_chr9_+_87015537_87015537	0.103937	Foxk1_Foxj1	ENSMUST00000058846.4|Ripply2|ENSMUSG00000047897.4|ripply2 homolog (zebrafish)
mm10_v2_chr7_-_102100227_102100258	0.102949	Foxk1_Foxj1	ENSMUST00000106937.1|Art5|ENSMUSG00000070424.5|ADP-ribosyltransferase 5
mm10_v2_chr4_+_11558914_11558979	0.102093	Foxk1_Foxj1	ENSMUST00000178703.1|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000095145.5|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000108306.2|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000070755.6|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae)
mm10_v2_chr14_-_8318023_8318054	0.101833	Foxk1_Foxj1	ENSMUST00000120411.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr15_+_79347534_79347556	0.100942	Foxk1_Foxj1	ENSMUST00000096350.3|Maff|ENSMUSG00000042622.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm10_v2_chr2_-_73452666_73452712	0.0999983	Foxk1_Foxj1	ENSMUST00000151939.1|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr14_+_3667518_3667518	0.0994603	Foxk1_Foxj1	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr15_-_55548164_55548164	0.0978222	Foxk1_Foxj1	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr15_-_36140393_36140406	0.0974972	Foxk1_Foxj1	ENSMUST00000172831.1|Rgs22|ENSMUSG00000037627.9|regulator of G-protein signalling 22
mm10_v2_chr11_+_87578384_87578470	0.0971822	Foxk1_Foxj1	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr14_+_3825596_3825596	0.0964034	Foxk1_Foxj1	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr6_-_86765866_86765921	0.0961032	Foxk1_Foxj1	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr12_+_76444560_76444560	0.093355	Foxk1_Foxj1	ENSMUST00000101281.2|Gm10451|ENSMUSG00000073000.2|predicted gene 10451
mm10_v2_chr9_-_54647199_54647346	0.0928525	Foxk1_Foxj1	ENSMUST00000128163.1|Acsbg1|ENSMUSG00000032281.5|acyl-CoA synthetase bubblegum family member 1
mm10_v2_chr3_-_65529355_65529384	0.0927385	Foxk1_Foxj1	ENSMUST00000099076.3|4931440P22Rik|ENSMUSG00000074580.5|RIKEN cDNA 4931440P22 gene
mm10_v2_chr4_-_87806296_87806325	0.0926354	Foxk1_Foxj1	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr12_-_81568474_81568474	0.09189	Foxk1_Foxj1	ENSMUST00000008582.3|Adam21|ENSMUSG00000008438.3|a disintegrin and metallopeptidase domain 21
mm10_v2_chr14_-_24486994_24487064	0.0910742	Foxk1_Foxj1	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr6_-_120357342_120357400	0.0908613	Foxk1_Foxj1	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr13_+_107031963_107031963	0.0908216	Foxk1_Foxj1	ENSMUST00000095459.1|3830408C21Rik|ENSMUSG00000071181.1|RIKEN cDNA 3830408C21 gene
mm10_v2_chr14_-_6266620_6266620	0.090564	Foxk1_Foxj1	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chrX_+_151198078_151198140	0.0896119	Foxk1_Foxj1	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr6_+_38534823_38534872	0.0896007	Foxk1_Foxj1	ENSMUST00000019833.4|1110001J03Rik|ENSMUSG00000019689.4|RIKEN cDNA 1110001J03 gene
mm10_v2_chr7_-_4844665_4844699	0.0895833	Foxk1_Foxj1	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr2_-_164473714_164473730	0.0893453	Foxk1_Foxj1	ENSMUST00000017864.2|Trp53tg5|ENSMUSG00000017720.2|transformation related protein 53 target 5
mm10_v2_chr10_-_30600662_30600749	0.089283	Foxk1_Foxj1	ENSMUST00000019927.6|Trmt11|ENSMUSG00000019792.7|tRNA methyltransferase 11
mm10_v2_chr6_-_129533267_129533275	0.0889985	Foxk1_Foxj1	ENSMUST00000181594.1|1700101I11Rik|ENSMUSG00000097675.1|RIKEN cDNA 1700101I11 gene
mm10_v2_chr15_+_79348061_79348154	0.0889162	Foxk1_Foxj1	ENSMUST00000163691.1|Maff|ENSMUSG00000042622.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm10_v2_chr4_-_45108038_45108128	0.0884538	Foxk1_Foxj1	ENSMUST00000107809.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107808.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107807.1|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107810.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast)
mm10_v2_chr2_-_79908389_79908403	0.0884201	Foxk1_Foxj1	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr1_-_119913162_119913208	0.0881755	Foxk1_Foxj1	ENSMUST00000037906.5|Tmem177|ENSMUSG00000036975.5|transmembrane protein 177
mm10_v2_chr16_-_34262945_34262972	0.0878207	Foxk1_Foxj1	ENSMUST00000114953.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chrX_+_153126897_153126897	0.0867364	Foxk1_Foxj1	ENSMUST00000163801.1|Foxr2|ENSMUSG00000071665.4|forkhead box R2
mm10_v2_chr14_+_4430992_4430992	0.0864735	Foxk1_Foxj1	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr13_-_64903888_64903995	0.0855028	Foxk1_Foxj1	ENSMUST00000091554.4|Cntnap3|ENSMUSG00000033063.7|contactin associated protein-like 3
mm10_v2_chr2_-_17460610_17460635	0.0853854	Foxk1_Foxj1	ENSMUST00000145492.1|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr7_+_105425817_105426002	0.0852121	Foxk1_Foxj1	ENSMUST00000181339.1|Cckbr|ENSMUSG00000030898.8|cholecystokinin B receptor 	ENSMUST00000033189.4|Cckbr|ENSMUSG00000030898.8|cholecystokinin B receptor
mm10_v2_chr10_+_21377290_21377347	0.0850045	Foxk1_Foxj1	ENSMUST00000042699.7|Aldh8a1|ENSMUSG00000037542.7|aldehyde dehydrogenase 8 family, member A1 	ENSMUST00000159163.1|Aldh8a1|ENSMUSG00000037542.7|aldehyde dehydrogenase 8 family, member A1
mm10_v2_chr13_+_49682191_49682221	0.0847481	Foxk1_Foxj1	ENSMUST00000172254.1|Iars|ENSMUSG00000037851.7|isoleucine-tRNA synthetase
mm10_v2_chr16_-_10447340_10447369	0.0841587	Foxk1_Foxj1	ENSMUST00000051118.6|Tvp23a|ENSMUSG00000050908.6|trans-golgi network vesicle protein 23A
mm10_v2_chr9_+_123806468_123806485	0.0839819	Foxk1_Foxj1	ENSMUST00000049810.7|Cxcr6|ENSMUSG00000048521.7|chemokine (C-X-C motif) receptor 6
mm10_v2_chr7_+_78895903_78896009	0.0837443	Foxk1_Foxj1	ENSMUST00000107425.1|Aen|ENSMUSG00000030609.12|apoptosis enhancing nuclease 	ENSMUST00000107421.1|Aen|ENSMUSG00000030609.12|apoptosis enhancing nuclease 	ENSMUST00000107423.1|Aen|ENSMUSG00000030609.12|apoptosis enhancing nuclease
mm10_v2_chr3_-_30599863_30599939	0.0836305	Foxk1_Foxj1	ENSMUST00000047630.6|Actrt3|ENSMUSG00000037737.6|actin related protein T3
mm10_v2_chr12_-_40134175_40134228	0.0828187	Foxk1_Foxj1	ENSMUST00000078481.7|Scin|ENSMUSG00000002565.10|scinderin 	ENSMUST00000002640.5|Scin|ENSMUSG00000002565.10|scinderin
mm10_v2_chr8_-_107588392_107588482	0.0825846	Foxk1_Foxj1	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr19_+_45149833_45149878	0.0825617	Foxk1_Foxj1	ENSMUST00000026236.9|Tlx1|ENSMUSG00000025215.9|T cell leukemia, homeobox 1
mm10_v2_chr7_-_30559828_30559842	0.0820882	Foxk1_Foxj1	ENSMUST00000108164.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr10_+_25408346_25408395	0.0819799	Foxk1_Foxj1	ENSMUST00000092645.6|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr4_+_95579417_95579428	0.0818177	Foxk1_Foxj1	ENSMUST00000043335.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr10_+_60106452_60106468	0.081544	Foxk1_Foxj1	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr2_+_136052180_136052239	0.0813432	Foxk1_Foxj1	ENSMUST00000144403.1|Lamp5|ENSMUSG00000027270.8|lysosomal-associated membrane protein family, member 5
mm10_v2_chr6_+_147042755_147042797	0.080904	Foxk1_Foxj1	ENSMUST00000036111.7|Mrps35|ENSMUSG00000040112.7|mitochondrial ribosomal protein S35
mm10_v2_chrX_-_100412587_100412606	0.0795551	Foxk1_Foxj1	ENSMUST00000033567.8|Awat2|ENSMUSG00000031220.8|acyl-CoA wax alcohol acyltransferase 2
mm10_v2_chr9_+_5345450_5345505	0.0793999	Foxk1_Foxj1	ENSMUST00000151332.1|Casp12|ENSMUSG00000025887.4|caspase 12
mm10_v2_chr2_+_163661495_163661499	0.079093	Foxk1_Foxj1	ENSMUST00000135537.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr8_-_36953139_36953160	0.0786471	Foxk1_Foxj1	ENSMUST00000179501.1|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr12_+_38780817_38780854	0.0785323	Foxk1_Foxj1	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_+_4718145_4718205	0.0780497	Foxk1_Foxj1	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr4_+_95579463_95579499	0.0779687	Foxk1_Foxj1	ENSMUST00000150830.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000134012.2|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr17_+_56613392_56613425	0.0772745	Foxk1_Foxj1	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr12_-_65073927_65073954	0.0759729	Foxk1_Foxj1	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr10_-_37138863_37138937	0.0759637	Foxk1_Foxj1	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr4_-_103215147_103215201	0.0759481	Foxk1_Foxj1	ENSMUST00000150285.1|Slc35d1|ENSMUSG00000028521.11|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm10_v2_chr18_+_34759551_34759558	0.0759036	Foxk1_Foxj1	ENSMUST00000097622.3|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr10_+_38965515_38965558	0.0745596	Foxk1_Foxj1	ENSMUST00000019992.5|Lama4|ENSMUSG00000019846.5|laminin, alpha 4
mm10_v2_chr4_-_34882919_34882964	0.0744961	Foxk1_Foxj1	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr10_-_62792243_62792368	0.0737202	Foxk1_Foxj1	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chrX_+_102119447_102119490	0.0730543	Foxk1_Foxj1	ENSMUST00000113627.3|Pin4|ENSMUSG00000079480.3|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm10_v2_chr9_-_64022027_64022042	0.0728864	Foxk1_Foxj1	ENSMUST00000179458.1|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr6_-_86765807_86765834	0.0719575	Foxk1_Foxj1	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr1_-_58504946_58505109	0.0711532	Foxk1_Foxj1	ENSMUST00000027198.5|Orc2|ENSMUSG00000026037.8|origin recognition complex, subunit 2
mm10_v2_chr12_+_71136848_71136848	0.0710215	Foxk1_Foxj1	ENSMUST00000149564.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene 	ENSMUST00000045907.8|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr10_-_130280218_130280242	0.0707726	Foxk1_Foxj1	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr6_-_125286015_125286050	0.0705616	Foxk1_Foxj1	ENSMUST00000088246.5|Tuba3a|ENSMUSG00000067702.5|tubulin, alpha 3A
mm10_v2_chr8_+_3567958_3568006	0.0700259	Foxk1_Foxj1	ENSMUST00000136592.1|C330021F23Rik|ENSMUSG00000065952.7|RIKEN cDNA C330021F23 gene
mm10_v2_chr3_+_51415986_51416044	0.0699297	Foxk1_Foxj1	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr9_+_65361049_65361060	0.0693187	Foxk1_Foxj1	ENSMUST00000147185.1|Gm514|ENSMUSG00000086228.1|predicted gene 514
mm10_v2_chrX_-_7681034_7681089	0.0692417	Foxk1_Foxj1	ENSMUST00000115695.3|Magix|ENSMUSG00000031147.8|MAGI family member, X-linked
mm10_v2_chr8_-_41417042_41417135	0.0690989	Foxk1_Foxj1	ENSMUST00000033999.6|Frg1|ENSMUSG00000031590.7|FSHD region gene 1
mm10_v2_chr5_+_108461222_108461241	0.0690246	Foxk1_Foxj1	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr3_-_129804030_129804097	0.0689317	Foxk1_Foxj1	ENSMUST00000179187.1|Lrit3|ENSMUSG00000093865.1|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
mm10_v2_chr1_+_171225054_171225100	0.0688791	Foxk1_Foxj1	ENSMUST00000111321.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000005824.5|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111320.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111319.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II
mm10_v2_chr11_+_98026695_98026744	0.0688246	Foxk1_Foxj1	ENSMUST00000092425.4|Rpl19|ENSMUSG00000017404.6|ribosomal protein L19
mm10_v2_chr4_-_154928545_154928571	0.0683252	Foxk1_Foxj1	ENSMUST00000152687.1|Tnfrsf14|ENSMUSG00000042333.8|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
mm10_v2_chr10_-_127030789_127030812	0.0669048	Foxk1_Foxj1	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr1_-_144775419_144775438	0.0668691	Foxk1_Foxj1	ENSMUST00000027603.3|Rgs18|ENSMUSG00000026357.3|regulator of G-protein signaling 18
mm10_v2_chr6_-_124636085_124636085	0.0667012	Foxk1_Foxj1	ENSMUST00000068797.2|Gm5077|ENSMUSG00000079343.3|predicted gene 5077
mm10_v2_chr1_+_180568913_180568960	0.0661217	Foxk1_Foxj1	ENSMUST00000027777.6|Parp1|ENSMUSG00000026496.6|poly (ADP-ribose) polymerase family, member 1
mm10_v2_chr11_+_77765588_77765643	0.0661109	Foxk1_Foxj1	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr11_+_98026918_98026931	0.0657758	Foxk1_Foxj1	ENSMUST00000017548.6|Rpl19|ENSMUSG00000017404.6|ribosomal protein L19
mm10_v2_chr6_-_59024340_59024450	0.0654405	Foxk1_Foxj1	ENSMUST00000173193.1|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chrX_+_163911401_163911439	0.0652865	Foxk1_Foxj1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr2_-_176917518_176917518	0.0649196	Foxk1_Foxj1	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr16_-_36666067_36666086	0.0642188	Foxk1_Foxj1	ENSMUST00000089620.4|Cd86|ENSMUSG00000022901.7|CD86 antigen
mm10_v2_chr9_-_60838200_60838200	0.0637219	Foxk1_Foxj1	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr8_+_70673198_70673267	0.0624925	Foxk1_Foxj1	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr13_+_94173992_94174027	0.0622247	Foxk1_Foxj1	ENSMUST00000121618.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr10_-_18234930_18235008	0.0613638	Foxk1_Foxj1	ENSMUST00000052648.8|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000080860.6|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000173243.1|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A
mm10_v2_chr6_+_34412334_34412373	0.0607949	Foxk1_Foxj1	ENSMUST00000007449.8|Akr1b7|ENSMUSG00000052131.7|aldo-keto reductase family 1, member B7
mm10_v2_chr7_-_27985796_27985796	0.0604158	Foxk1_Foxj1	ENSMUST00000099111.3|Zfp850|ENSMUSG00000074608.3|zinc finger protein 850
mm10_v2_chr3_-_10208569_10208586	0.06034	Foxk1_Foxj1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr2_-_110761564_110761564	0.0603279	Foxk1_Foxj1	ENSMUST00000140777.1|Ano3|ENSMUSG00000074968.5|anoctamin 3
mm10_v2_chr14_+_52110939_52110953	0.0600146	Foxk1_Foxj1	ENSMUST00000111600.4|Rpgrip1|ENSMUSG00000057132.9|retinitis pigmentosa GTPase regulator interacting protein 1
mm10_v2_chr3_-_80802789_80802840	0.0599398	Foxk1_Foxj1	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr17_+_13948373_13948373	0.0596469	Foxk1_Foxj1	ENSMUST00000088809.5|Gm7168|ENSMUSG00000067941.5|predicted gene 7168
mm10_v2_chr11_-_75348261_75348324	0.0594917	Foxk1_Foxj1	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chr2_+_102706356_102706438	0.0593596	Foxk1_Foxj1	ENSMUST00000123759.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000111212.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000005220.4|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr3_+_67374091_67374102	0.0590618	Foxk1_Foxj1	ENSMUST00000077916.5|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr9_+_21337828_21337859	0.0590242	Foxk1_Foxj1	ENSMUST00000034697.7|Slc44a2|ENSMUSG00000057193.7|solute carrier family 44, member 2
mm10_v2_chr14_+_120275669_120275714	0.0580989	Foxk1_Foxj1	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr5_+_124483165_124483202	0.0578356	Foxk1_Foxj1	ENSMUST00000136567.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr11_-_3266377_3266423	0.0572349	Foxk1_Foxj1	ENSMUST00000020741.5|Drg1|ENSMUSG00000020457.7|developmentally regulated GTP binding protein 1
mm10_v2_chr6_-_129507107_129507171	0.0570556	Foxk1_Foxj1	ENSMUST00000183258.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000182784.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000032265.6|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000162815.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1
mm10_v2_chr8_+_20136455_20136574	0.056319	Foxk1_Foxj1	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr17_+_24840108_24840143	0.0562291	Foxk1_Foxj1	ENSMUST00000164251.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr12_+_52097737_52097775	0.0561309	Foxk1_Foxj1	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr6_+_79818031_79818031	0.055572	Foxk1_Foxj1	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr7_-_19604444_19604492	0.0552463	Foxk1_Foxj1	ENSMUST00000086041.5|Clasrp|ENSMUSG00000061028.6|CLK4-associating serine/arginine rich protein
mm10_v2_chr18_+_34758890_34758906	0.0551988	Foxk1_Foxj1	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr5_+_121220191_121220243	0.0551945	Foxk1_Foxj1	ENSMUST00000119892.2|Gm15800|ENSMUSG00000042744.10|predicted gene 15800 	ENSMUST00000042614.6|Gm15800|ENSMUSG00000042744.10|predicted gene 15800
mm10_v2_chr5_+_93206518_93206518	0.0547256	Foxk1_Foxj1	ENSMUST00000031330.4|2010109A12Rik|ENSMUSG00000029384.4|RIKEN cDNA 2010109A12 gene
mm10_v2_chr3_-_144975011_144975046	0.0544218	Foxk1_Foxj1	ENSMUST00000075496.4|Clca6|ENSMUSG00000068547.3|chloride channel calcium activated 6 	ENSMUST00000029923.6|Clca6|ENSMUSG00000068547.3|chloride channel calcium activated 6
mm10_v2_chr13_+_49582745_49582778	0.0541386	Foxk1_Foxj1	ENSMUST00000065494.7|Omd|ENSMUSG00000048368.8|osteomodulin
mm10_v2_chr3_+_145987835_145987901	0.053892	Foxk1_Foxj1	ENSMUST00000039517.6|Syde2|ENSMUSG00000036863.7|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm10_v2_chr1_-_75046639_75046639	0.0535883	Foxk1_Foxj1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr12_+_38781093_38781129	0.0534875	Foxk1_Foxj1	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr13_+_109632760_109632790	0.0533001	Foxk1_Foxj1	ENSMUST00000135275.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr11_+_72301613_72301671	0.0529679	Foxk1_Foxj1	ENSMUST00000151440.1|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1 	ENSMUST00000146233.1|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1 	ENSMUST00000140842.2|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1
mm10_v2_chr19_-_28011138_28011181	0.0529345	Foxk1_Foxj1	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr4_-_88880201_88880228	0.0528552	Foxk1_Foxj1	ENSMUST00000056014.2|Ifne|ENSMUSG00000045364.2|interferon epsilon
mm10_v2_chr2_-_152332353_152332422	0.0528157	Foxk1_Foxj1	ENSMUST00000109847.2|Rbck1|ENSMUSG00000027466.9|RanBP-type and C3HC4-type zinc finger containing 1
mm10_v2_chr6_+_73248382_73248382	0.0527656	Foxk1_Foxj1	ENSMUST00000064740.6|Suclg1|ENSMUSG00000052738.8|succinate-CoA ligase, GDP-forming, alpha subunit
mm10_v2_chr6_+_57002300_57002300	0.0526854	Foxk1_Foxj1	ENSMUST00000079669.4|Vmn1r6|ENSMUSG00000058923.4|vomeronasal 1 receptor 6
mm10_v2_chr11_-_58801944_58801968	0.0526752	Foxk1_Foxj1	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr13_-_14613017_14613056	0.0523141	Foxk1_Foxj1	ENSMUST00000015816.3|Mrpl32|ENSMUSG00000015672.3|mitochondrial ribosomal protein L32
mm10_v2_chr3_+_58526303_58526303	0.0521046	Foxk1_Foxj1	ENSMUST00000138848.1|Eif2a|ENSMUSG00000027810.8|eukaryotic translation initiation factor 2A
mm10_v2_chr18_+_43764317_43764333	0.0518907	Foxk1_Foxj1	ENSMUST00000043803.6|Scgb3a2|ENSMUSG00000038791.8|secretoglobin, family 3A, member 2
mm10_v2_chr1_+_58505135_58505162	0.0516496	Foxk1_Foxj1	ENSMUST00000160947.1|Gm15834|ENSMUSG00000085054.2|predicted gene 15834 	ENSMUST00000129740.2|Gm15834|ENSMUSG00000085054.2|predicted gene 15834 	ENSMUST00000139825.1|Gm15834|ENSMUSG00000085054.2|predicted gene 15834
mm10_v2_chr12_+_110841021_110841037	0.0516009	Foxk1_Foxj1	ENSMUST00000181348.1|4921507G05Rik|ENSMUSG00000097650.1|RIKEN cDNA 4921507G05 gene
mm10_v2_chrM_+_3906_3926	0.051588	Foxk1_Foxj1	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chrY_+_90785442_90785586	0.051471	Foxk1_Foxj1	ENSMUST00000177591.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1 	ENSMUST00000177671.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1 	ENSMUST00000179077.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1
mm10_v2_chr8_+_93810832_93810843	0.0513174	Foxk1_Foxj1	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr16_-_30587537_30587597	0.0511934	Foxk1_Foxj1	ENSMUST00000117363.2|Lsg1|ENSMUSG00000022538.13|large subunit GTPase 1 homolog (S. cerevisiae)
mm10_v2_chr17_+_35194502_35194626	0.0511664	Foxk1_Foxj1	ENSMUST00000173600.1|Ltb|ENSMUSG00000024399.5|lymphotoxin B
mm10_v2_chr12_-_85270564_85270608	0.0511555	Foxk1_Foxj1	ENSMUST00000019378.6|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli) 	ENSMUST00000166821.1|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli)
mm10_v2_chr7_-_80403315_80403339	0.0509263	Foxk1_Foxj1	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr11_+_116434087_116434106	0.050661	Foxk1_Foxj1	ENSMUST00000057676.6|Ubald2|ENSMUSG00000050628.6|UBA-like domain containing 2
mm10_v2_chr11_-_46389471_46389505	0.0506554	Foxk1_Foxj1	ENSMUST00000109237.2|Itk|ENSMUSG00000020395.7|IL2 inducible T cell kinase
mm10_v2_chr17_+_12584183_12584195	0.0505508	Foxk1_Foxj1	ENSMUST00000046959.7|Slc22a2|ENSMUSG00000040966.9|solute carrier family 22 (organic cation transporter), member 2
mm10_v2_chr3_+_62338344_62338344	0.0502618	Foxk1_Foxj1	ENSMUST00000079300.6|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr11_-_107131922_107131954	0.050233	Foxk1_Foxj1	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr4_-_154097105_154097173	0.050215	Foxk1_Foxj1	ENSMUST00000105643.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000133533.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000097762.4|Trp73|ENSMUSG00000029026.10|transformation related protein 73
mm10_v2_chr11_-_59375657_59375657	0.0501612	Foxk1_Foxj1	ENSMUST00000061481.6|Prss38|ENSMUSG00000049291.6|protease, serine, 38
mm10_v2_chr10_+_94576254_94576270	0.0500397	Foxk1_Foxj1	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr2_+_125152505_125152606	0.0498574	Foxk1_Foxj1	ENSMUST00000110494.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000028630.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000110495.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1
mm10_v2_chr7_+_120917744_120917815	0.0496793	Foxk1_Foxj1	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr2_+_65620829_65620857	0.0495588	Foxk1_Foxj1	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr7_+_45514619_45514642	0.0495257	Foxk1_Foxj1	ENSMUST00000107761.1|Tulp2|ENSMUSG00000023467.10|tubby-like protein 2
mm10_v2_chr3_-_72967854_72967869	0.0493692	Foxk1_Foxj1	ENSMUST00000167334.1|Sis|ENSMUSG00000027790.8|sucrase isomaltase (alpha-glucosidase)
mm10_v2_chrM_-_14060_14074	0.0492416	Foxk1_Foxj1	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr16_-_15637277_15637400	0.0491623	Foxk1_Foxj1	ENSMUST00000023353.3|Mcm4|ENSMUSG00000022673.4|minichromosome maintenance deficient 4 homolog (S. cerevisiae)
mm10_v2_chr6_-_148896150_148896237	0.049144	Foxk1_Foxj1	ENSMUST00000072324.5|Caprin2|ENSMUSG00000030309.10|caprin family member 2 	ENSMUST00000111569.2|Caprin2|ENSMUSG00000030309.10|caprin family member 2
mm10_v2_chr11_+_4895316_4895327	0.0490822	Foxk1_Foxj1	ENSMUST00000101615.2|Thoc5|ENSMUSG00000034274.5|THO complex 5
mm10_v2_chr8_-_121083085_121083153	0.0490262	Foxk1_Foxj1	ENSMUST00000182264.1|Fendrr|ENSMUSG00000097336.2|Foxf1 adjacent non-coding developmental regulatory RNA
mm10_v2_chr1_+_131970589_131970609	0.0487022	Foxk1_Foxj1	ENSMUST00000027695.6|Slc45a3|ENSMUSG00000026435.9|solute carrier family 45, member 3
mm10_v2_chr10_-_127030813_127030840	0.0486746	Foxk1_Foxj1	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr9_+_5345414_5345435	0.0485548	Foxk1_Foxj1	ENSMUST00000027009.4|Casp12|ENSMUSG00000025887.4|caspase 12
mm10_v2_chr5_+_91027457_91027492	0.0477797	Foxk1_Foxj1	ENSMUST00000041516.8|Epgn|ENSMUSG00000035020.8|epithelial mitogen
mm10_v2_chr10_-_103236280_103236327	0.0474739	Foxk1_Foxj1	ENSMUST00000123364.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000166240.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000020043.5|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1
mm10_v2_chr2_-_73312701_73312724	0.0471139	Foxk1_Foxj1	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr1_-_144177259_144177372	0.047027	Foxk1_Foxj1	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr2_+_38511643_38511814	0.0469105	Foxk1_Foxj1	ENSMUST00000054234.3|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112902.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112895.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6
mm10_v2_chr4_-_82850721_82850814	0.0469049	Foxk1_Foxj1	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr12_-_88321481_88321481	0.046903	Foxk1_Foxj1	ENSMUST00000177747.1|Gm5039|ENSMUSG00000093847.1|predicted gene 5039
mm10_v2_chr19_+_5406815_5406880	0.0468083	Foxk1_Foxj1	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr11_+_102285161_102285251	0.0466968	Foxk1_Foxj1	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr9_+_51115999_51116006	0.0465376	Foxk1_Foxj1	ENSMUST00000114431.2|Btg4|ENSMUSG00000032056.9|B cell translocation gene 4
mm10_v2_chrX_+_71364745_71364794	0.0460511	Foxk1_Foxj1	ENSMUST00000114601.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000146213.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000015358.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr17_-_24455265_24455345	0.0459766	Foxk1_Foxj1	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr7_-_133123770_133123876	0.0457784	Foxk1_Foxj1	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr17_-_26095487_26095514	0.0457099	Foxk1_Foxj1	ENSMUST00000025007.5|Nme4|ENSMUSG00000024177.8|NME/NM23 nucleoside diphosphate kinase 4
mm10_v2_chr18_+_67800101_67800147	0.0455722	Foxk1_Foxj1	ENSMUST00000025425.5|Cep192|ENSMUSG00000024542.8|centrosomal protein 192
mm10_v2_chr17_+_34564268_34564299	0.0455546	Foxk1_Foxj1	ENSMUST00000015612.7|Notch4|ENSMUSG00000015468.8|notch 4
mm10_v2_chr17_+_25823626_25823637	0.0455142	Foxk1_Foxj1	ENSMUST00000026833.5|Wdr24|ENSMUSG00000025737.5|WD repeat domain 24
mm10_v2_chr19_-_28010995_28011054	0.0454185	Foxk1_Foxj1	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chrM_+_2743_2761	0.0453195	Foxk1_Foxj1	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr2_-_151009364_151009398	0.0452897	Foxk1_Foxj1	ENSMUST00000109896.1|Ninl|ENSMUSG00000068115.7|ninein-like
mm10_v2_chr13_-_74376566_74376566	0.0452362	Foxk1_Foxj1	ENSMUST00000091481.2|Zfp72|ENSMUSG00000069184.2|zinc finger protein 72
mm10_v2_chr4_+_49631999_49632010	0.0450784	Foxk1_Foxj1	ENSMUST00000140341.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr19_+_6184363_6184467	0.0450304	Foxk1_Foxj1	ENSMUST00000025699.2|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene 	ENSMUST00000113528.1|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene
mm10_v2_chr2_-_65567505_65567627	0.0450167	Foxk1_Foxj1	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr10_-_127522428_127522454	0.0448745	Foxk1_Foxj1	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chr3_-_95106907_95106930	0.0447884	Foxk1_Foxj1	ENSMUST00000107233.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr2_+_176236860_176236860	0.0443429	Foxk1_Foxj1	ENSMUST00000166464.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr8_-_39642669_39642678	0.0438837	Foxk1_Foxj1	ENSMUST00000026021.6|Msr1|ENSMUSG00000025044.9|macrophage scavenger receptor 1 	ENSMUST00000170091.1|Msr1|ENSMUSG00000025044.9|macrophage scavenger receptor 1
mm10_v2_chr13_+_4191163_4191200	0.0437839	Foxk1_Foxj1	ENSMUST00000021634.2|Akr1c13|ENSMUSG00000021213.5|aldo-keto reductase family 1, member C13
mm10_v2_chr11_-_103363431_103363464	0.0437183	Foxk1_Foxj1	ENSMUST00000092557.5|Arhgap27|ENSMUSG00000034255.11|Rho GTPase activating protein 27
mm10_v2_chr7_-_133123409_133123472	0.0426504	Foxk1_Foxj1	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr11_-_22982090_22982382	0.0426166	Foxk1_Foxj1	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr4_+_44943727_44943791	0.0424506	Foxk1_Foxj1	ENSMUST00000154177.1|Gm12678|ENSMUSG00000084854.1|predicted gene 12678
mm10_v2_chr19_+_4962306_4962332	0.0422863	Foxk1_Foxj1	ENSMUST00000025836.4|Mrpl11|ENSMUSG00000024902.4|mitochondrial ribosomal protein L11
mm10_v2_chr6_-_53820764_53820837	0.0420961	Foxk1_Foxj1	ENSMUST00000127748.2|Tril|ENSMUSG00000043496.5|TLR4 interactor with leucine-rich repeats
mm10_v2_chr3_+_33799791_33799955	0.0420322	Foxk1_Foxj1	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr8_-_106337987_106337996	0.0419405	Foxk1_Foxj1	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr2_-_71367749_71367797	0.041797	Foxk1_Foxj1	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr6_+_135011609_135011653	0.0417286	Foxk1_Foxj1	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chr10_+_39420009_39420074	0.0416428	Foxk1_Foxj1	ENSMUST00000157009.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr8_+_66386292_66386308	0.041564	Foxk1_Foxj1	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr17_+_29679247_29679270	0.0410675	Foxk1_Foxj1	ENSMUST00000129864.1|Cmtr1|ENSMUSG00000024019.11|cap methyltransferase 1
mm10_v2_chr10_-_14718191_14718228	0.0410254	Foxk1_Foxj1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr3_-_155055341_155055407	0.0409316	Foxk1_Foxj1	ENSMUST00000064076.3|Tnni3k|ENSMUSG00000040086.7|TNNI3 interacting kinase
mm10_v2_chr5_+_124483128_124483158	0.0407285	Foxk1_Foxj1	ENSMUST00000031349.8|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr2_-_119541513_119541513	0.0407152	Foxk1_Foxj1	ENSMUST00000171024.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr13_+_35659856_35659870	0.0404701	Foxk1_Foxj1	ENSMUST00000075220.6|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr19_-_24901309_24901309	0.0402458	Foxk1_Foxj1	ENSMUST00000058600.2|Foxd4|ENSMUSG00000051490.2|forkhead box D4
mm10_v2_chr13_+_90923122_90923170	0.0402222	Foxk1_Foxj1	ENSMUST00000051955.7|Rps23|ENSMUSG00000049517.7|ribosomal protein S23
mm10_v2_chr15_+_76343504_76343558	0.0401373	Foxk1_Foxj1	ENSMUST00000023210.6|Cyc1|ENSMUSG00000022551.7|cytochrome c-1
mm10_v2_chr10_+_111972664_111972805	0.0399718	Foxk1_Foxj1	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr13_+_55209776_55209788	0.0395661	Foxk1_Foxj1	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr6_+_41860239_41860308	0.0394838	Foxk1_Foxj1	ENSMUST00000014248.4|Sval2|ENSMUSG00000014104.6|seminal vesicle antigen-like 2
mm10_v2_chr2_-_152332639_152332678	0.0394327	Foxk1_Foxj1	ENSMUST00000028964.7|Rbck1|ENSMUSG00000027466.9|RanBP-type and C3HC4-type zinc finger containing 1
mm10_v2_chr11_-_46389509_46389525	0.0392458	Foxk1_Foxj1	ENSMUST00000020664.6|Itk|ENSMUSG00000020395.7|IL2 inducible T cell kinase
mm10_v2_chr11_-_58552237_58552237	0.039178	Foxk1_Foxj1	ENSMUST00000073933.1|Olfr328|ENSMUSG00000057654.4|olfactory receptor 328
mm10_v2_chr4_+_57637816_57637846	0.0389746	Foxk1_Foxj1	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr13_+_4059565_4059591	0.0389742	Foxk1_Foxj1	ENSMUST00000041768.6|Akr1c14|ENSMUSG00000033715.8|aldo-keto reductase family 1, member C14
mm10_v2_chr9_+_53850243_53850257	0.0386039	Foxk1_Foxj1	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr12_-_86079019_86079041	0.0385665	Foxk1_Foxj1	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr3_-_54714353_54714353	0.0382029	Foxk1_Foxj1	ENSMUST00000178832.1|Gm21958|ENSMUSG00000094487.1|predicted gene, 21958
mm10_v2_chr7_+_133637543_133637559	0.0381207	Foxk1_Foxj1	ENSMUST00000051169.6|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr8_-_78821136_78821143	0.0378262	Foxk1_Foxj1	ENSMUST00000130325.1|Lsm6|ENSMUSG00000031683.10|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENSMUST00000051867.6|Lsm6|ENSMUSG00000031683.10|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr7_+_19176416_19176440	0.0377129	Foxk1_Foxj1	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr2_-_50296680_50296801	0.0375368	Foxk1_Foxj1	ENSMUST00000144143.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000102769.4|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000133768.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm10_v2_chr2_+_158502633_158502698	0.0372102	Foxk1_Foxj1	ENSMUST00000109484.1|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr4_-_116075022_116075071	0.0369449	Foxk1_Foxj1	ENSMUST00000050580.4|Uqcrh|ENSMUSG00000063882.6|ubiquinol-cytochrome c reductase hinge protein 	ENSMUST00000078676.5|Uqcrh|ENSMUSG00000063882.6|ubiquinol-cytochrome c reductase hinge protein
mm10_v2_chr5_+_124483458_124483491	0.0367103	Foxk1_Foxj1	ENSMUST00000111453.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr7_-_97417730_97417730	0.0366552	Foxk1_Foxj1	ENSMUST00000043077.7|Thrsp|ENSMUSG00000035686.7|thyroid hormone responsive
mm10_v2_chr2_+_117249725_117249754	0.0366145	Foxk1_Foxj1	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr3_-_146495115_146495139	0.0365392	Foxk1_Foxj1	ENSMUST00000093951.2|Spata1|ENSMUSG00000028188.7|spermatogenesis associated 1
mm10_v2_chr11_+_88047302_88047373	0.0364256	Foxk1_Foxj1	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr9_-_62026788_62026856	0.0364168	Foxk1_Foxj1	ENSMUST00000034817.4|Paqr5|ENSMUSG00000032278.5|progestin and adipoQ receptor family member V
mm10_v2_chr4_+_55350043_55350078	0.0363442	Foxk1_Foxj1	ENSMUST00000030134.8|Rad23b|ENSMUSG00000028426.10|RAD23b homolog (S. cerevisiae)
mm10_v2_chr2_-_118479635_118479711	0.0361348	Foxk1_Foxj1	ENSMUST00000110862.1|Srp14|ENSMUSG00000009549.8|signal recognition particle 14 	ENSMUST00000009693.8|Srp14|ENSMUSG00000009549.8|signal recognition particle 14
mm10_v2_chr3_+_67374116_67374154	0.0360125	Foxk1_Foxj1	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr3_+_79884496_79884571	0.0359687	Foxk1_Foxj1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr1_-_92641942_92641985	0.035901	Foxk1_Foxj1	ENSMUST00000097642.3|Myeov2|ENSMUSG00000073616.4|myeloma overexpressed 2
mm10_v2_chr16_-_30267524_30267572	0.0358916	Foxk1_Foxj1	ENSMUST00000064856.7|Cpn2|ENSMUSG00000023176.8|carboxypeptidase N, polypeptide 2
mm10_v2_chr8_+_68276567_68276705	0.035635	Foxk1_Foxj1	ENSMUST00000066594.3|Sh2d4a|ENSMUSG00000053886.3|SH2 domain containing 4A
mm10_v2_chr17_+_5799491_5799614	0.0355394	Foxk1_Foxj1	ENSMUST00000181484.1|3300005D01Rik|ENSMUSG00000096965.1|RIKEN cDNA 3300005D01 gene
mm10_v2_chr7_+_27553244_27553302	0.0352573	Foxk1_Foxj1	ENSMUST00000067386.7|2310022A10Rik|ENSMUSG00000049643.9|RIKEN cDNA 2310022A10 gene
mm10_v2_chr8_+_75016222_75016246	0.0352018	Foxk1_Foxj1	ENSMUST00000109940.1|Hmgxb4|ENSMUSG00000034518.7|HMG box domain containing 4
mm10_v2_chr12_-_103425780_103425867	0.0350644	Foxk1_Foxj1	ENSMUST00000110001.2|Ddx24|ENSMUSG00000041645.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 	ENSMUST00000044923.7|Ddx24|ENSMUSG00000041645.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24
mm10_v2_chr12_-_4689926_4689926	0.0345112	Foxk1_Foxj1	ENSMUST00000080062.6|Gm17541|ENSMUSG00000091732.1|predicted gene, 17541
mm10_v2_chr17_+_35076902_35077073	0.0344988	Foxk1_Foxj1	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr15_+_57912199_57912278	0.0340398	Foxk1_Foxj1	ENSMUST00000022992.6|Tbc1d31|ENSMUSG00000022364.8|TBC1 domain family, member 31
mm10_v2_chr8_+_104733997_104734024	0.0340289	Foxk1_Foxj1	ENSMUST00000034346.8|Ces2a|ENSMUSG00000055730.9|carboxylesterase 2A 	ENSMUST00000164182.2|Ces2a|ENSMUSG00000055730.9|carboxylesterase 2A
mm10_v2_chr11_-_100397740_100397792	0.03394	Foxk1_Foxj1	ENSMUST00000001592.8|Jup|ENSMUSG00000001552.8|junction plakoglobin 	ENSMUST00000107403.1|Jup|ENSMUSG00000001552.8|junction plakoglobin
mm10_v2_chr2_-_174464063_174464105	0.0338371	Foxk1_Foxj1	ENSMUST00000016396.7|Atp5e|ENSMUSG00000016252.7|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm10_v2_chr7_+_133637686_133637742	0.0338111	Foxk1_Foxj1	ENSMUST00000128901.2|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chrX_-_100626568_100626611	0.0337196	Foxk1_Foxj1	ENSMUST00000015812.5|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr3_+_89202916_89202962	0.0335802	Foxk1_Foxj1	ENSMUST00000077367.4|Gba|ENSMUSG00000028048.5|glucosidase, beta, acid 	ENSMUST00000167998.1|Gba|ENSMUSG00000028048.5|glucosidase, beta, acid
mm10_v2_chr5_+_21785253_21785301	0.0332505	Foxk1_Foxj1	ENSMUST00000030769.5|Psmc2|ENSMUSG00000028932.7|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm10_v2_chr15_-_36879816_36879884	0.0332472	Foxk1_Foxj1	ENSMUST00000100713.2|Gm10384|ENSMUSG00000072618.2|predicted gene 10384
mm10_v2_chr18_+_35598607_35598653	0.0330998	Foxk1_Foxj1	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chrX_+_56872543_56872543	0.033017	Foxk1_Foxj1	ENSMUST00000153784.1|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr6_-_99028874_99028942	0.0325664	Foxk1_Foxj1	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr5_+_92809372_92809436	0.0323275	Foxk1_Foxj1	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr2_-_76982455_76982553	0.0323095	Foxk1_Foxj1	ENSMUST00000011934.5|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000099981.2|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000099980.3|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000111882.2|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000140091.1|Ttn|ENSMUSG00000051747.8|titin
mm10_v2_chr18_-_65393844_65393922	0.0322822	Foxk1_Foxj1	ENSMUST00000035548.8|Alpk2|ENSMUSG00000032845.9|alpha-kinase 2
mm10_v2_chr13_-_19307551_19307551	0.032246	Foxk1_Foxj1	ENSMUST00000103561.1|Tcrg-C2|ENSMUSG00000076752.1|T-cell receptor gamma, constant 2
mm10_v2_chr15_-_42676967_42676978	0.0320205	Foxk1_Foxj1	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chrX_+_59999436_59999495	0.0318836	Foxk1_Foxj1	ENSMUST00000033477.4|F9|ENSMUSG00000031138.4|coagulation factor IX
mm10_v2_chr13_+_14613242_14613272	0.0318057	Foxk1_Foxj1	ENSMUST00000170836.2|Psma2|ENSMUSG00000015671.10|proteasome (prosome, macropain) subunit, alpha type 2
mm10_v2_chr11_+_43433720_43433783	0.0315958	Foxk1_Foxj1	ENSMUST00000126128.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000151880.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000020681.3|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae)
mm10_v2_chr15_-_10470490_10470527	0.0313245	Foxk1_Foxj1	ENSMUST00000136591.1|Dnajc21|ENSMUSG00000044224.10|DnaJ (Hsp40) homolog, subfamily C, member 21
mm10_v2_chr6_+_129533183_129533205	0.0312068	Foxk1_Foxj1	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr3_-_95106779_95106897	0.0311247	Foxk1_Foxj1	ENSMUST00000005768.7|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107232.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107236.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr14_-_6874257_6874257	0.0307138	Foxk1_Foxj1	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr5_-_100674230_100674284	0.0306923	Foxk1_Foxj1	ENSMUST00000031262.7|Coq2|ENSMUSG00000029319.7|coenzyme Q2 homolog, prenyltransferase (yeast)
mm10_v2_chr2_-_151476153_151476153	0.0300958	Foxk1_Foxj1	ENSMUST00000080132.2|4921509C19Rik|ENSMUSG00000061525.2|RIKEN cDNA 4921509C19 gene
mm10_v2_chr9_-_107872403_107872422	0.0298638	Foxk1_Foxj1	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr16_-_30550560_30550594	0.0296463	Foxk1_Foxj1	ENSMUST00000140402.1|Tmem44|ENSMUSG00000022537.11|transmembrane protein 44
mm10_v2_chr8_-_61902669_61902713	0.0295593	Foxk1_Foxj1	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr7_+_26061495_26061495	0.0294741	Foxk1_Foxj1	ENSMUST00000005669.7|Cyp2b13|ENSMUSG00000040583.7|cytochrome P450, family 2, subfamily b, polypeptide 13
mm10_v2_chr7_-_4604041_4604053	0.0291816	Foxk1_Foxj1	ENSMUST00000166650.1|Ptprh|ENSMUSG00000035429.7|protein tyrosine phosphatase, receptor type, H
mm10_v2_chr10_+_4482502_4482520	0.0291153	Foxk1_Foxj1	ENSMUST00000138112.1|Ccdc170|ENSMUSG00000019767.6|coiled-coil domain containing 170
mm10_v2_chr11_+_58786139_58786139	0.0289772	Foxk1_Foxj1	ENSMUST00000076393.3|Olfr314|ENSMUSG00000059504.3|olfactory receptor 314
mm10_v2_chr6_-_23650298_23650309	0.0288644	Foxk1_Foxj1	ENSMUST00000063548.3|Rnf133|ENSMUSG00000051956.4|ring finger protein 133
mm10_v2_chr11_+_46235460_46235531	0.0286927	Foxk1_Foxj1	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr5_-_21865604_21865617	0.0277232	Foxk1_Foxj1	ENSMUST00000030878.1|Slc26a5|ENSMUSG00000029015.3|solute carrier family 26, member 5
mm10_v2_chr16_+_56075399_56075492	0.0270014	Foxk1_Foxj1	ENSMUST00000089362.2|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000089360.3|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000049128.6|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7
mm10_v2_chr11_-_102156339_102156414	0.0269528	Foxk1_Foxj1	ENSMUST00000021296.6|Tmem101|ENSMUSG00000020921.6|transmembrane protein 101
mm10_v2_chr6_-_129623840_129623866	0.0268394	Foxk1_Foxj1	ENSMUST00000095412.4|Klrk1|ENSMUSG00000030149.9|killer cell lectin-like receptor subfamily K, member 1 	ENSMUST00000168919.1|Klrk1|ENSMUSG00000030149.9|killer cell lectin-like receptor subfamily K, member 1
mm10_v2_chr4_-_132303331_132303385	0.0266535	Foxk1_Foxj1	ENSMUST00000040411.6|Rab42|ENSMUSG00000089687.2|RAB42, member RAS oncogene family
mm10_v2_chr3_+_152165374_152165374	0.026626	Foxk1_Foxj1	ENSMUST00000181854.1|D630002J18Rik|ENSMUSG00000097293.1|RIKEN cDNA D630002J18 gene
mm10_v2_chr5_-_145805862_145805876	0.0264535	Foxk1_Foxj1	ENSMUST00000067479.5|Cyp3a44|ENSMUSG00000054417.5|cytochrome P450, family 3, subfamily a, polypeptide 44
mm10_v2_chr11_+_53567361_53567526	0.0261261	Foxk1_Foxj1	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr3_-_103791537_103791563	0.0256442	Foxk1_Foxj1	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr17_-_79896028_79896123	0.0254329	Foxk1_Foxj1	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr1_-_63769267_63769267	0.025163	Foxk1_Foxj1	ENSMUST00000027102.1|4933402D24Rik|ENSMUSG00000025961.1|RIKEN cDNA 4933402D24 gene
mm10_v2_chr2_+_23207470_23207497	0.0251059	Foxk1_Foxj1	ENSMUST00000028113.3|4931423N10Rik|ENSMUSG00000026774.5|RIKEN cDNA 4931423N10 gene 	ENSMUST00000114505.1|4931423N10Rik|ENSMUSG00000026774.5|RIKEN cDNA 4931423N10 gene
mm10_v2_chr7_+_19282613_19282702	0.0250064	Foxk1_Foxj1	ENSMUST00000032559.9|Rtn2|ENSMUSG00000030401.9|reticulon 2 (Z-band associated protein)
mm10_v2_chr15_+_78406777_78406801	0.0248611	Foxk1_Foxj1	ENSMUST00000169133.1|Mpst|ENSMUSG00000071711.5|mercaptopyruvate sulfurtransferase
mm10_v2_chr5_-_115098295_115098295	0.024824	Foxk1_Foxj1	ENSMUST00000100848.2|Gm10401|ENSMUSG00000072693.2|predicted gene 10401
mm10_v2_chr9_-_110375430_110375430	0.0247442	Foxk1_Foxj1	ENSMUST00000168137.1|5830462I19Rik|ENSMUSG00000091102.1|RIKEN cDNA 5830462I19 gene
mm10_v2_chr1_-_88008520_88008556	0.0244693	Foxk1_Foxj1	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chr1_+_25830657_25830657	0.02444	Foxk1_Foxj1	ENSMUST00000064487.1|Gm9884|ENSMUSG00000052558.1|predicted gene 9884
mm10_v2_chr3_+_138217814_138217828	0.0242611	Foxk1_Foxj1	ENSMUST00000090171.5|Adh7|ENSMUSG00000055301.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm10_v2_chr17_+_35194405_35194439	0.0241712	Foxk1_Foxj1	ENSMUST00000025262.5|Ltb|ENSMUSG00000024399.5|lymphotoxin B
mm10_v2_chr5_+_135980099_135980108	0.0240192	Foxk1_Foxj1	ENSMUST00000005073.6|Zp3|ENSMUSG00000004948.6|zona pellucida glycoprotein 3
mm10_v2_chr1_-_45503282_45503282	0.023782	Foxk1_Foxj1	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr14_-_62454793_62454793	0.0235338	Foxk1_Foxj1	ENSMUST00000128573.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr4_+_152199805_152199821	0.0230673	Foxk1_Foxj1	ENSMUST00000105652.2|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr3_-_103732553_103732553	0.0228474	Foxk1_Foxj1	ENSMUST00000169286.1|BC027582|ENSMUSG00000091115.1|cDNA sequence BC027582
mm10_v2_chr4_+_155582476_155582495	0.0228397	Foxk1_Foxj1	ENSMUST00000105612.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr3_-_16006332_16006361	0.0226277	Foxk1_Foxj1	ENSMUST00000108347.2|Gm5150|ENSMUSG00000078780.2|predicted gene 5150
mm10_v2_chr19_-_38125258_38125321	0.0224016	Foxk1_Foxj1	ENSMUST00000025951.6|Rbp4|ENSMUSG00000024990.6|retinol binding protein 4, plasma
mm10_v2_chr8_+_94214567_94214608	0.0222601	Foxk1_Foxj1	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr9_-_75559604_75559665	0.0220763	Foxk1_Foxj1	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr11_-_5707658_5707708	0.0219909	Foxk1_Foxj1	ENSMUST00000154330.1|Mrps24|ENSMUSG00000020477.4|mitochondrial ribosomal protein S24
mm10_v2_chr3_+_129881149_129881188	0.0213977	Foxk1_Foxj1	ENSMUST00000061165.7|Pla2g12a|ENSMUSG00000027999.9|phospholipase A2, group XIIA
mm10_v2_chr9_+_96258697_96258711	0.0212129	Foxk1_Foxj1	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr4_-_117682233_117682279	0.0210484	Foxk1_Foxj1	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr9_-_20521375_20521427	0.0209523	Foxk1_Foxj1	ENSMUST00000068296.7|Zfp266|ENSMUSG00000060510.7|zinc finger protein 266 	ENSMUST00000174462.1|Zfp266|ENSMUSG00000060510.7|zinc finger protein 266
mm10_v2_chr4_-_44710408_44710418	0.0209508	Foxk1_Foxj1	ENSMUST00000134968.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173821.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000174319.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173733.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000172866.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000165417.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107825.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000102932.3|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107827.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107826.2|Pax5|ENSMUSG00000014030.9|paired box gene 5
mm10_v2_chr14_+_75955003_75955016	0.0209189	Foxk1_Foxj1	ENSMUST00000050120.2|Kctd4|ENSMUSG00000046523.4|potassium channel tetramerisation domain containing 4
mm10_v2_chr4_-_129662442_129662485	0.0209168	Foxk1_Foxj1	ENSMUST00000003828.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr10_+_88201158_88201218	0.0206559	Foxk1_Foxj1	ENSMUST00000171151.2|Ccdc53|ENSMUSG00000020056.10|coiled-coil domain containing 53
mm10_v2_chr11_+_49280150_49280150	0.0204839	Foxk1_Foxj1	ENSMUST00000078932.1|Olfr1393|ENSMUSG00000059864.1|olfactory receptor 1393
mm10_v2_chr5_+_115279666_115279716	0.0204232	Foxk1_Foxj1	ENSMUST00000040421.4|Coq5|ENSMUSG00000041733.4|coenzyme Q5 homolog, methyltransferase (yeast)
mm10_v2_chr19_-_20390944_20391010	0.0203845	Foxk1_Foxj1	ENSMUST00000025561.7|Anxa1|ENSMUSG00000024659.8|annexin A1
mm10_v2_chr11_+_23665615_23665697	0.0201057	Foxk1_Foxj1	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr10_+_37139558_37139558	0.0199154	Foxk1_Foxj1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr7_+_27591513_27591562	0.0198823	Foxk1_Foxj1	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr5_-_129008546_129008596	0.0197659	Foxk1_Foxj1	ENSMUST00000031378.7|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr16_+_42907563_42907684	0.0196047	Foxk1_Foxj1	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr6_+_29361410_29361461	0.0194577	Foxk1_Foxj1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr19_-_4012656_4012806	0.019152	Foxk1_Foxj1	ENSMUST00000134479.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000128787.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000133474.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000136921.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000042497.7|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm10_v2_chrX_-_99470672_99470748	0.0191363	Foxk1_Foxj1	ENSMUST00000113797.3|Pja1|ENSMUSG00000034403.10|praja1, RING-H2 motif containing 	ENSMUST00000113790.1|Pja1|ENSMUSG00000034403.10|praja1, RING-H2 motif containing 	ENSMUST00000036354.6|Pja1|ENSMUSG00000034403.10|praja1, RING-H2 motif containing 	ENSMUST00000167246.1|Pja1|ENSMUSG00000034403.10|praja1, RING-H2 motif containing
mm10_v2_chr15_-_98918131_98918231	0.0190927	Foxk1_Foxj1	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr1_-_162937225_162937225	0.0190804	Foxk1_Foxj1	ENSMUST00000178465.1|Fmo6|ENSMUSG00000095576.1|flavin containing monooxygenase 6
mm10_v2_chr2_+_11172382_11172419	0.018931	Foxk1_Foxj1	ENSMUST00000028118.3|Prkcq|ENSMUSG00000026778.7|protein kinase C, theta
mm10_v2_chr1_+_131638485_131638496	0.0189259	Foxk1_Foxj1	ENSMUST00000112411.1|Ctse|ENSMUSG00000004552.10|cathepsin E
mm10_v2_chr1_+_150319407_150319449	0.0186574	Foxk1_Foxj1	ENSMUST00000165062.1|Pdc|ENSMUSG00000006007.8|phosducin
mm10_v2_chr8_-_54718664_54718689	0.0185873	Foxk1_Foxj1	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chrX_+_9849703_9849710	0.0185502	Foxk1_Foxj1	ENSMUST00000057113.1|4930557A04Rik|ENSMUSG00000048994.1|RIKEN cDNA 4930557A04 gene
mm10_v2_chr4_+_49632046_49632110	0.0184133	Foxk1_Foxj1	ENSMUST00000156314.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000167496.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000029989.4|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000146547.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr17_+_47726834_47726848	0.0181959	Foxk1_Foxj1	ENSMUST00000024782.5|Pgc|ENSMUSG00000023987.8|progastricsin (pepsinogen C) 	ENSMUST00000144955.1|Pgc|ENSMUSG00000023987.8|progastricsin (pepsinogen C)
mm10_v2_chr2_-_112259281_112259312	0.0175409	Foxk1_Foxj1	ENSMUST00000043970.1|Nutm1|ENSMUSG00000041358.1|NUT midline carcinoma, family member 1
mm10_v2_chr4_-_141790891_141790931	0.0173757	Foxk1_Foxj1	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr11_+_69622024_69622101	0.0172891	Foxk1_Foxj1	ENSMUST00000108656.2|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2 	ENSMUST00000092969.1|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2
mm10_v2_chr2_+_110721632_110721648	0.0171117	Foxk1_Foxj1	ENSMUST00000090332.4|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr6_-_66559708_66559708	0.0170816	Foxk1_Foxj1	ENSMUST00000079584.1|Vmn1r32|ENSMUSG00000062905.1|vomeronasal 1 receptor 32
mm10_v2_chr17_+_68837062_68837136	0.0165917	Foxk1_Foxj1	ENSMUST00000178545.1|Tmem200c|ENSMUSG00000095407.1|transmembrane protein 200C
mm10_v2_chr16_-_19706365_19706399	0.0165097	Foxk1_Foxj1	ENSMUST00000081880.5|Lamp3|ENSMUSG00000041247.7|lysosomal-associated membrane protein 3
mm10_v2_chr2_-_110305730_110305755	0.016409	Foxk1_Foxj1	ENSMUST00000046233.2|Bbox1|ENSMUSG00000041660.2|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm10_v2_chr19_-_46969474_46969555	0.0163529	Foxk1_Foxj1	ENSMUST00000086961.7|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr14_-_70323783_70323814	0.0163441	Foxk1_Foxj1	ENSMUST00000151011.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14
mm10_v2_chr4_+_118409331_118409401	0.0162325	Foxk1_Foxj1	ENSMUST00000084319.4|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000106384.3|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000126089.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000073881.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000019229.8|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000144577.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm10_v2_chr6_+_142413441_142413441	0.0161644	Foxk1_Foxj1	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr17_-_33718591_33718690	0.01605	Foxk1_Foxj1	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr10_+_5593718_5593739	0.0158719	Foxk1_Foxj1	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr9_-_60511003_60511035	0.0158516	Foxk1_Foxj1	ENSMUST00000098660.3|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr17_-_36642661_36642666	0.0156749	Foxk1_Foxj1	ENSMUST00000087165.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9 	ENSMUST00000087167.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9
mm10_v2_chr1_-_74305607_74305622	0.0155416	Foxk1_Foxj1	ENSMUST00000130763.1|Tmbim1|ENSMUSG00000006301.11|transmembrane BAX inhibitor motif containing 1
mm10_v2_chr9_+_123774540_123774601	0.0155173	Foxk1_Foxj1	ENSMUST00000180093.1|Ccr9|ENSMUSG00000029530.9|chemokine (C-C motif) receptor 9
mm10_v2_chr7_+_17812633_17812688	0.0151347	Foxk1_Foxj1	ENSMUST00000023953.4|Ceacam14|ENSMUSG00000023185.4|carcinoembryonic antigen-related cell adhesion molecule 14
mm10_v2_chr7_+_100009914_100009914	0.015102	Foxk1_Foxj1	ENSMUST00000107084.1|Chrdl2|ENSMUSG00000030732.6|chordin-like 2
mm10_v2_chr6_+_142414012_142414012	0.0147048	Foxk1_Foxj1	ENSMUST00000141548.1|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr11_-_98193260_98193298	0.0146124	Foxk1_Foxj1	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr2_+_91256144_91256170	0.0145996	Foxk1_Foxj1	ENSMUST00000154959.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000059566.4|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr5_-_129008494_129008537	0.0145942	Foxk1_Foxj1	ENSMUST00000100680.3|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr11_-_101302206_101302291	0.0145692	Foxk1_Foxj1	ENSMUST00000140706.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000170502.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000172233.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000130916.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related
mm10_v2_chr11_+_96134219_96134219	0.014178	Foxk1_Foxj1	ENSMUST00000107680.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr1_-_85270543_85270566	0.0141765	Foxk1_Foxj1	ENSMUST00000093506.5|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene 	ENSMUST00000064341.8|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene
mm10_v2_chr15_-_97020322_97020336	0.0140586	Foxk1_Foxj1	ENSMUST00000166223.1|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr16_-_26526744_26526774	0.0139403	Foxk1_Foxj1	ENSMUST00000165687.1|Tmem207|ENSMUSG00000091972.1|transmembrane protein 207
mm10_v2_chr6_+_24733241_24733248	0.0137254	Foxk1_Foxj1	ENSMUST00000031690.5|Hyal6|ENSMUSG00000029679.7|hyaluronoglucosaminidase 6
mm10_v2_chr5_+_74535535_74535558	0.0136536	Foxk1_Foxj1	ENSMUST00000121950.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chrX_-_74373218_74373249	0.013643	Foxk1_Foxj1	ENSMUST00000178691.1|Ubl4|ENSMUSG00000015290.9|ubiquitin-like 4 	ENSMUST00000114146.1|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr8_+_81856324_81856376	0.0136048	Foxk1_Foxj1	ENSMUST00000109851.2|Inpp4b|ENSMUSG00000037940.9|inositol polyphosphate-4-phosphatase, type II
mm10_v2_chr4_+_155522462_155522543	0.0136038	Foxk1_Foxj1	ENSMUST00000177094.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr6_+_117907795_117907832	0.0135076	Foxk1_Foxj1	ENSMUST00000167657.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr2_+_86007778_86007778	0.0134824	Foxk1_Foxj1	ENSMUST00000062166.1|Olfr1032|ENSMUSG00000042796.1|olfactory receptor 1032
mm10_v2_chr5_+_74535449_74535524	0.0131648	Foxk1_Foxj1	ENSMUST00000080164.5|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113536.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000122245.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000120618.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113535.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113534.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr16_-_38550173_38550258	0.0131641	Foxk1_Foxj1	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr16_-_4880284_4880315	0.0131007	Foxk1_Foxj1	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr6_+_115544664_115544712	0.01303	Foxk1_Foxj1	ENSMUST00000040234.7|Tsen2|ENSMUSG00000042389.7|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm10_v2_chr2_-_175327598_175327598	0.0129265	Foxk1_Foxj1	ENSMUST00000109050.2|Gm4631|ENSMUSG00000078899.3|predicted gene 4631
mm10_v2_chr6_-_48708206_48708252	0.0125879	Foxk1_Foxj1	ENSMUST00000119315.1|Gimap6|ENSMUSG00000047867.5|GTPase, IMAP family member 6 	ENSMUST00000053661.4|Gimap6|ENSMUSG00000047867.5|GTPase, IMAP family member 6
mm10_v2_chr4_-_62470868_62470922	0.0125766	Foxk1_Foxj1	ENSMUST00000135811.1|Wdr31|ENSMUSG00000028391.10|WD repeat domain 31 	ENSMUST00000120095.1|Wdr31|ENSMUSG00000028391.10|WD repeat domain 31 	ENSMUST00000030087.7|Wdr31|ENSMUSG00000028391.10|WD repeat domain 31 	ENSMUST00000107452.1|Wdr31|ENSMUSG00000028391.10|WD repeat domain 31 	ENSMUST00000155522.1|Wdr31|ENSMUSG00000028391.10|WD repeat domain 31
mm10_v2_chr4_+_40723084_40723117	0.0125356	Foxk1_Foxj1	ENSMUST00000149794.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr5_-_127632897_127632946	0.0124096	Foxk1_Foxj1	ENSMUST00000155321.1|Slc15a4|ENSMUSG00000029416.11|solute carrier family 15, member 4
mm10_v2_chr12_-_40248073_40248086	0.0120751	Foxk1_Foxj1	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr13_+_83573577_83573607	0.0119442	Foxk1_Foxj1	ENSMUST00000185052.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr7_+_81762925_81762943	0.0119238	Foxk1_Foxj1	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr1_-_171607378_171607410	0.0119128	Foxk1_Foxj1	ENSMUST00000068878.7|Ly9|ENSMUSG00000004707.8|lymphocyte antigen 9
mm10_v2_chr6_-_39377681_39377710	0.0118474	Foxk1_Foxj1	ENSMUST00000090243.4|Slc37a3|ENSMUSG00000029924.9|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm10_v2_chr19_+_56461629_56461646	0.0117648	Foxk1_Foxj1	ENSMUST00000178590.1|Plekhs1|ENSMUSG00000035818.7|pleckstrin homology domain containing, family S member 1 	ENSMUST00000039666.6|Plekhs1|ENSMUSG00000035818.7|pleckstrin homology domain containing, family S member 1
mm10_v2_chr2_+_167538192_167538210	0.0115215	Foxk1_Foxj1	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chrX_+_139217166_139217190	0.0114171	Foxk1_Foxj1	ENSMUST00000166444.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000170671.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113041.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113042.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1
mm10_v2_chr7_-_100547620_100547620	0.0112079	Foxk1_Foxj1	ENSMUST00000064334.2|D630004N19Rik|ENSMUSG00000052467.2|RIKEN cDNA D630004N19 gene
mm10_v2_chr2_-_84822546_84822652	0.0110151	Foxk1_Foxj1	ENSMUST00000028471.5|Smtnl1|ENSMUSG00000027077.7|smoothelin-like 1
mm10_v2_chr1_-_184811170_184811313	0.0108332	Foxk1_Foxj1	ENSMUST00000048462.6|Marc1|ENSMUSG00000026621.7|mitochondrial amidoxime reducing component 1 	ENSMUST00000110992.2|Marc1|ENSMUSG00000026621.7|mitochondrial amidoxime reducing component 1
mm10_v2_chr7_+_116093296_116093329	0.0106074	Foxk1_Foxj1	ENSMUST00000032899.5|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr13_+_76579670_76579678	0.0105668	Foxk1_Foxj1	ENSMUST00000126960.1|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1 	ENSMUST00000109583.2|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1
mm10_v2_chr16_-_20316750_20316805	0.0101435	Foxk1_Foxj1	ENSMUST00000182741.1|Cyp2ab1|ENSMUSG00000022818.6|cytochrome P450, family 2, subfamily ab, polypeptide 1
mm10_v2_chr19_+_5041337_5041416	0.00943917	Foxk1_Foxj1	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chr16_+_44820728_44820728	0.00930263	Foxk1_Foxj1	ENSMUST00000114626.3|Cd200r4|ENSMUSG00000062082.10|CD200 receptor 4
mm10_v2_chr1_-_171607321_171607363	0.00900275	Foxk1_Foxj1	ENSMUST00000111277.1|Ly9|ENSMUSG00000004707.8|lymphocyte antigen 9 	ENSMUST00000004827.7|Ly9|ENSMUSG00000004707.8|lymphocyte antigen 9
mm10_v2_chr11_-_4594750_4594820	0.00891828	Foxk1_Foxj1	ENSMUST00000109943.3|Mtmr3|ENSMUSG00000034354.11|myotubularin related protein 3
mm10_v2_chr16_+_38362205_38362230	0.0088943	Foxk1_Foxj1	ENSMUST00000023494.6|Popdc2|ENSMUSG00000022803.6|popeye domain containing 2
mm10_v2_chr7_+_19291070_19291124	0.00856889	Foxk1_Foxj1	ENSMUST00000108468.3|Rtn2|ENSMUSG00000030401.9|reticulon 2 (Z-band associated protein)
mm10_v2_chr7_+_116093336_116093372	0.0083427	Foxk1_Foxj1	ENSMUST00000106608.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene 	ENSMUST00000106607.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr9_+_113812547_113812621	0.00826594	Foxk1_Foxj1	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr1_+_55131317_55131331	0.00826499	Foxk1_Foxj1	ENSMUST00000162553.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr15_-_66969616_66969647	0.00825911	Foxk1_Foxj1	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr8_+_113643206_113643231	0.00814881	Foxk1_Foxj1	ENSMUST00000034219.4|Syce1l|ENSMUSG00000033409.7|synaptonemal complex central element protein 1 like 	ENSMUST00000095173.1|Syce1l|ENSMUSG00000033409.7|synaptonemal complex central element protein 1 like
mm10_v2_chr1_-_26687458_26687462	0.00789885	Foxk1_Foxj1	ENSMUST00000097801.3|4931408C20Rik|ENSMUSG00000073722.3|RIKEN cDNA 4931408C20 gene
mm10_v2_chr3_+_32397671_32397671	0.00776042	Foxk1_Foxj1	ENSMUST00000108243.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr1_+_137966529_137966532	0.00763289	Foxk1_Foxj1	ENSMUST00000182158.1|A430106G13Rik|ENSMUSG00000098206.1|RIKEN cDNA A430106G13 gene
mm10_v2_chr1_+_20730903_20730908	0.00763211	Foxk1_Foxj1	ENSMUST00000027061.4|Il17a|ENSMUSG00000025929.4|interleukin 17A
mm10_v2_chr2_-_64393853_64393862	0.00736866	Foxk1_Foxj1	ENSMUST00000142353.1|Gm13575|ENSMUSG00000087702.1|predicted gene 13575
mm10_v2_chr4_-_134012381_134012404	0.00730921	Foxk1_Foxj1	ENSMUST00000176113.1|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr2_+_110721587_110721619	0.00720659	Foxk1_Foxj1	ENSMUST00000111017.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr17_+_40811089_40811133	0.00708889	Foxk1_Foxj1	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr14_+_74640840_74640887	0.00701884	Foxk1_Foxj1	ENSMUST00000036653.3|Htr2a|ENSMUSG00000034997.4|5-hydroxytryptamine (serotonin) receptor 2A
mm10_v2_chr12_-_101958148_101958246	0.00696929	Foxk1_Foxj1	ENSMUST00000159883.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000160251.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000161011.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000021606.5|Atxn3|ENSMUSG00000021189.5|ataxin 3
mm10_v2_chr19_-_8819314_8819350	0.00683833	Foxk1_Foxj1	ENSMUST00000096751.4|Ttc9c|ENSMUSG00000071660.4|tetratricopeptide repeat domain 9C
mm10_v2_chr14_+_47472628_47472640	0.00682932	Foxk1_Foxj1	ENSMUST00000095941.2|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr9_-_100506844_100506856	0.00676081	Foxk1_Foxj1	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr10_+_88201087_88201116	0.00675972	Foxk1_Foxj1	ENSMUST00000020248.9|Ccdc53|ENSMUSG00000020056.10|coiled-coil domain containing 53
mm10_v2_chr7_-_126566364_126566416	0.00642801	Foxk1_Foxj1	ENSMUST00000032992.5|Eif3c|ENSMUSG00000030738.10|eukaryotic translation initiation factor 3, subunit C
mm10_v2_chr3_+_154664096_154664212	0.00629847	Foxk1_Foxj1	ENSMUST00000172865.1|4922501L14Rik|ENSMUSG00000042943.8|RIKEN cDNA 4922501L14 gene
mm10_v2_chr16_-_29541483_29541597	0.00597555	Foxk1_Foxj1	ENSMUST00000057018.8|Atp13a4|ENSMUSG00000038094.9|ATPase type 13A4 	ENSMUST00000182627.1|Atp13a4|ENSMUSG00000038094.9|ATPase type 13A4
mm10_v2_chrX_+_7722214_7722260	0.00592166	Foxk1_Foxj1	ENSMUST00000043045.2|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116634.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115689.3|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000131077.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115688.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116633.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr2_+_91255954_91256105	0.00586818	Foxk1_Foxj1	ENSMUST00000134699.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr1_+_78816909_78816949	0.00577383	Foxk1_Foxj1	ENSMUST00000057262.6|Kcne4|ENSMUSG00000047330.7|potassium voltage-gated channel, Isk-related subfamily, gene 4
mm10_v2_chr3_+_153844209_153844225	0.00577115	Foxk1_Foxj1	ENSMUST00000044089.3|Asb17|ENSMUSG00000038997.3|ankyrin repeat and SOCS box-containing 17
mm10_v2_chr14_-_26442824_26442890	0.00570188	Foxk1_Foxj1	ENSMUST00000136635.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein 	ENSMUST00000125437.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein
mm10_v2_chr7_+_25619404_25619493	0.00563128	Foxk1_Foxj1	ENSMUST00000077338.5|Atp5sl|ENSMUSG00000057229.5|ATP5S-like 	ENSMUST00000085953.3|Atp5sl|ENSMUSG00000057229.5|ATP5S-like
mm10_v2_chr10_+_127420867_127420916	0.00551082	Foxk1_Foxj1	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr6_-_129660556_129660689	0.00551042	Foxk1_Foxj1	ENSMUST00000119533.1|Klrc2|ENSMUSG00000052736.9|killer cell lectin-like receptor subfamily C, member 2 	ENSMUST00000145984.1|Klrc2|ENSMUSG00000052736.9|killer cell lectin-like receptor subfamily C, member 2 	ENSMUST00000118401.1|Klrc2|ENSMUSG00000052736.9|killer cell lectin-like receptor subfamily C, member 2 	ENSMUST00000071920.4|Klrc2|ENSMUSG00000052736.9|killer cell lectin-like receptor subfamily C, member 2
mm10_v2_chr4_+_33209259_33209319	0.00532776	Foxk1_Foxj1	ENSMUST00000108159.1|Srsf12|ENSMUSG00000054679.2|serine/arginine-rich splicing factor 12
mm10_v2_chr13_+_23695791_23695817	0.00505509	Foxk1_Foxj1	ENSMUST00000041052.2|Hist1h1t|ENSMUSG00000036211.2|histone cluster 1, H1t
mm10_v2_chr3_+_40708855_40708906	0.00492887	Foxk1_Foxj1	ENSMUST00000091184.6|Slc25a31|ENSMUSG00000069041.6|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
mm10_v2_chr14_+_55765956_55765999	0.00459699	Foxk1_Foxj1	ENSMUST00000057569.3|Ltb4r1|ENSMUSG00000046908.5|leukotriene B4 receptor 1
mm10_v2_chr10_+_94575257_94575295	0.00442478	Foxk1_Foxj1	ENSMUST00000121471.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr5_+_138441468_138441540	0.0043714	Foxk1_Foxj1	ENSMUST00000085856.5|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157 	ENSMUST00000110912.1|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157 	ENSMUST00000100524.2|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157
mm10_v2_chr11_+_101733011_101733041	0.00424281	Foxk1_Foxj1	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr10_+_118860826_118860826	0.00417226	Foxk1_Foxj1	ENSMUST00000059966.4|4932442E05Rik|ENSMUSG00000050709.4|RIKEN cDNA 4932442E05 gene
mm10_v2_chr1_+_10056922_10056926	0.00401214	Foxk1_Foxj1	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr5_-_31526693_31526773	0.00392189	Foxk1_Foxj1	ENSMUST00000118874.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000117642.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000065388.4|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like
mm10_v2_chr10_+_11281304_11281357	0.00386741	Foxk1_Foxj1	ENSMUST00000129456.1|Fbxo30|ENSMUSG00000047648.7|F-box protein 30
mm10_v2_chr2_-_121109795_121109795	0.00375529	Foxk1_Foxj1	ENSMUST00000110675.1|Tgm7|ENSMUSG00000079103.2|transglutaminase 7
mm10_v2_chr5_+_143817786_143817818	0.00324659	Foxk1_Foxj1	ENSMUST00000100487.4|Eif2ak1|ENSMUSG00000029613.9|eukaryotic translation initiation factor 2 alpha kinase 1
mm10_v2_chr6_-_129740484_129740484	0.00320588	Foxk1_Foxj1	ENSMUST00000050385.5|Klri2|ENSMUSG00000043932.5|killer cell lectin-like receptor family I member 2
mm10_v2_chr14_-_105177263_105177277	0.00313514	Foxk1_Foxj1	ENSMUST00000163499.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr16_-_11909398_11909445	0.0027828	Foxk1_Foxj1	ENSMUST00000127972.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000121750.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000096272.4|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000073371.6|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1
mm10_v2_chr14_-_55784027_55784073	0.00267487	Foxk1_Foxj1	ENSMUST00000170223.1|Adcy4|ENSMUSG00000022220.7|adenylate cyclase 4
mm10_v2_chr19_+_12695783_12695814	0.00254956	Foxk1_Foxj1	ENSMUST00000025598.3|Keg1|ENSMUSG00000024694.3|kidney expressed gene 1 	ENSMUST00000138545.1|Keg1|ENSMUSG00000024694.3|kidney expressed gene 1 	ENSMUST00000154822.1|Keg1|ENSMUSG00000024694.3|kidney expressed gene 1
mm10_v2_chr12_+_4843303_4843419	0.00243284	Foxk1_Foxj1	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr4_+_147507600_147507600	0.0021846	Foxk1_Foxj1	ENSMUST00000063704.7|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr12_-_99393010_99393090	0.00217424	Foxk1_Foxj1	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr4_+_11704439_11704457	0.00209263	Foxk1_Foxj1	ENSMUST00000108304.2|Gem|ENSMUSG00000028214.7|GTP binding protein (gene overexpressed in skeletal muscle)
mm10_v2_chr4_-_139833524_139833535	0.00204217	Foxk1_Foxj1	ENSMUST00000030508.7|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr4_-_118409219_118409282	0.00201709	Foxk1_Foxj1	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr19_-_8818924_8819008	0.00181128	Foxk1_Foxj1	ENSMUST00000153281.1|Ttc9c|ENSMUSG00000071660.4|tetratricopeptide repeat domain 9C
mm10_v2_chr14_+_32028989_32029044	0.00126229	Foxk1_Foxj1	ENSMUST00000022460.4|Galnt15|ENSMUSG00000021903.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
mm10_v2_chr5_+_139211934_139212027	0.00117032	Foxk1_Foxj1	ENSMUST00000148772.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1 	ENSMUST00000110882.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1
mm10_v2_chr11_+_76902152_76902167	0.00102639	Foxk1_Foxj1	ENSMUST00000102495.1|Tmigd1|ENSMUSG00000020839.10|transmembrane and immunoglobulin domain containing 1
mm10_v2_chr2_-_118728430_118728446	0.00101731	Foxk1_Foxj1	ENSMUST00000102524.1|Plcb2|ENSMUSG00000040061.11|phospholipase C, beta 2
mm10_v2_chr11_+_96133786_96133786	0.000861395	Foxk1_Foxj1	ENSMUST00000167258.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr17_-_44736648_44736674	0.000776017	Foxk1_Foxj1	ENSMUST00000113572.2|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr3_+_139205887_139205909	0.000770226	Foxk1_Foxj1	ENSMUST00000062306.6|Stpg2|ENSMUSG00000047940.7|sperm tail PG rich repeat containing 2
mm10_v2_chr14_+_47472547_47472625	0.0007266	Foxk1_Foxj1	ENSMUST00000168833.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000163324.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000043112.7|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr15_+_85510812_85510812	0.000624038	Foxk1_Foxj1	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr8_-_24595634_24595671	0.000528057	Foxk1_Foxj1	ENSMUST00000110667.1|Ido1|ENSMUSG00000031551.6|indoleamine 2,3-dioxygenase 1
mm10_v2_chrX_+_20617503_20617816	0.000435918	Foxk1_Foxj1	ENSMUST00000115375.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000115374.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000084383.3|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10
mm10_v2_chr2_-_27475622_27475698	0.000124824	Foxk1_Foxj1	ENSMUST00000138693.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000113941.2|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000077737.6|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr18_+_46925982_46925982	8.59895e-05	Foxk1_Foxj1	ENSMUST00000097580.1|Arl14epl|ENSMUSG00000073568.1|ADP-ribosylation factor-like 14 effector protein-like
mm10_v2_chrX_+_61709597_61709620	7.36722e-05	Foxk1_Foxj1	ENSMUST00000075983.4|Ldoc1|ENSMUSG00000057615.4|leucine zipper, down-regulated in cancer 1
