mm10_v2_chr13_+_46418266_46418316	0.155051	GAGAUGA	ENSMUST00000037923.3|Rbm24|ENSMUSG00000038132.5|RNA binding motif protein 24
mm10_v2_chr8_-_115707778_115707794	0.131729	GAGAUGA	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr12_+_86678685_86678796	0.123745	GAGAUGA	ENSMUST00000021681.3|Vash1|ENSMUSG00000021256.5|vasohibin 1
mm10_v2_chr18_-_77565050_77565162	0.0969362	GAGAUGA	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chrX_-_103821940_103821992	0.0943444	GAGAUGA	ENSMUST00000042664.5|Slc16a2|ENSMUSG00000033965.6|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm10_v2_chr1_-_72874877_72874891	0.0922364	GAGAUGA	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr2_+_163054682_163054693	0.0887686	GAGAUGA	ENSMUST00000018005.3|Mybl2|ENSMUSG00000017861.5|myeloblastosis oncogene-like 2
mm10_v2_chr5_+_75152274_75152297	0.0848406	GAGAUGA	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr7_+_58658181_58658294	0.0701707	GAGAUGA	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr16_+_36071624_36071688	0.0602543	GAGAUGA	ENSMUST00000164916.1|Ccdc58|ENSMUSG00000075229.4|coiled-coil domain containing 58 	ENSMUST00000163352.1|Ccdc58|ENSMUSG00000075229.4|coiled-coil domain containing 58
mm10_v2_chr9_-_20815048_20815069	0.0566609	GAGAUGA	ENSMUST00000004201.7|Col5a3|ENSMUSG00000004098.7|collagen, type V, alpha 3
mm10_v2_chr5_+_142960343_142960363	0.0551077	GAGAUGA	ENSMUST00000031565.8|Fscn1|ENSMUSG00000029581.8|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm10_v2_chr10_-_128589650_128589673	0.0517734	GAGAUGA	ENSMUST00000082059.6|Erbb3|ENSMUSG00000018166.8|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
mm10_v2_chr7_+_18925863_18925899	0.0502452	GAGAUGA	ENSMUST00000172835.1|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2 	ENSMUST00000032571.8|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2
mm10_v2_chr15_-_58324161_58324178	0.0499559	GAGAUGA	ENSMUST00000022985.1|Klhl38|ENSMUSG00000022357.2|kelch-like 38
mm10_v2_chr1_+_156558844_156559049	0.0481809	GAGAUGA	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr1_-_95667555_95667597	0.0474934	GAGAUGA	ENSMUST00000043336.4|St8sia4|ENSMUSG00000040710.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm10_v2_chr7_-_127021205_127021216	0.0467564	GAGAUGA	ENSMUST00000159916.1|Prrt2|ENSMUSG00000045114.7|proline-rich transmembrane protein 2
mm10_v2_chr16_+_13358375_13358439	0.0465809	GAGAUGA	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr18_+_4921662_4921726	0.0459176	GAGAUGA	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr15_-_100495239_100495267	0.0453947	GAGAUGA	ENSMUST00000061457.5|Csrnp2|ENSMUSG00000044636.5|cysteine-serine-rich nuclear protein 2
mm10_v2_chr19_+_28835074_28835116	0.0452092	GAGAUGA	ENSMUST00000025875.4|Slc1a1|ENSMUSG00000024935.4|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm10_v2_chr11_+_77216180_77216287	0.0439293	GAGAUGA	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chrX_-_104201126_104201185	0.0423217	GAGAUGA	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr5_+_121397936_121398004	0.0420169	GAGAUGA	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr7_+_16309577_16309641	0.0390035	GAGAUGA	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chrX_-_140543177_140543195	0.0376571	GAGAUGA	ENSMUST00000055738.5|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr1_-_45503282_45503282	0.0368244	GAGAUGA	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr7_+_45413657_45413705	0.0366576	GAGAUGA	ENSMUST00000058879.6|Ntf5|ENSMUSG00000074121.2|neurotrophin 5
mm10_v2_chr10_+_24595623_24595780	0.0364782	GAGAUGA	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr11_+_115381906_115381933	0.0358437	GAGAUGA	ENSMUST00000053288.5|Cdr2l|ENSMUSG00000050910.5|cerebellar degeneration-related protein 2-like
mm10_v2_chr7_-_89517576_89517587	0.0354571	GAGAUGA	ENSMUST00000041761.5|Prss23|ENSMUSG00000039405.6|protease, serine, 23
mm10_v2_chr6_+_83115495_83115574	0.0353675	GAGAUGA	ENSMUST00000032114.7|Mogs|ENSMUSG00000030036.7|mannosyl-oligosaccharide glucosidase
mm10_v2_chr7_-_116038734_116038750	0.0339138	GAGAUGA	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr11_-_87359011_87359081	0.033029	GAGAUGA	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr2_+_5951440_5951469	0.0314976	GAGAUGA	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr9_-_53248106_53248117	0.0311161	GAGAUGA	ENSMUST00000065630.6|Ddx10|ENSMUSG00000053289.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm10_v2_chr15_-_11905609_11905674	0.0306334	GAGAUGA	ENSMUST00000066529.3|Npr3|ENSMUSG00000022206.6|natriuretic peptide receptor 3
mm10_v2_chr5_-_140649018_140649052	0.0296955	GAGAUGA	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr7_-_98361310_98361328	0.0296322	GAGAUGA	ENSMUST00000165257.1|Tsku|ENSMUSG00000049580.6|tsukushi
mm10_v2_chr11_+_105292637_105292669	0.0285799	GAGAUGA	ENSMUST00000100335.3|Mrc2|ENSMUSG00000020695.8|mannose receptor, C type 2 	ENSMUST00000021038.4|Mrc2|ENSMUSG00000020695.8|mannose receptor, C type 2
mm10_v2_chr17_-_73950172_73950189	0.0271577	GAGAUGA	ENSMUST00000024866.4|Xdh|ENSMUSG00000024066.8|xanthine dehydrogenase
mm10_v2_chrX_-_142966709_142966734	0.0270465	GAGAUGA	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr7_+_28179469_28179535	0.0255032	GAGAUGA	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr1_+_87326997_87327006	0.0251118	GAGAUGA	ENSMUST00000027475.8|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr12_+_91400990_91401022	0.0248658	GAGAUGA	ENSMUST00000021346.7|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor 	ENSMUST00000021343.6|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor
mm10_v2_chr6_+_120836201_120836257	0.0239509	GAGAUGA	ENSMUST00000009256.2|Bcl2l13|ENSMUSG00000009112.2|BCL2-like 13 (apoptosis facilitator)
mm10_v2_chr6_-_101377897_101378016	0.0236287	GAGAUGA	ENSMUST00000075994.6|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr4_-_88033328_88033373	0.0235503	GAGAUGA	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr7_+_101108768_101108783	0.0233315	GAGAUGA	ENSMUST00000098250.3|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2 	ENSMUST00000032931.7|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2
mm10_v2_chr6_-_38876163_38876234	0.0223064	GAGAUGA	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr6_+_8948608_8948619	0.0221348	GAGAUGA	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr1_+_187997821_187997834	0.0219224	GAGAUGA	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr4_+_20008357_20008451	0.0217225	GAGAUGA	ENSMUST00000117632.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein 	ENSMUST00000098244.1|Ttpa|ENSMUSG00000073988.7|tocopherol (alpha) transfer protein
mm10_v2_chr4_-_58206596_58206616	0.0216751	GAGAUGA	ENSMUST00000042850.8|Svep1|ENSMUSG00000028369.9|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm10_v2_chr5_-_134688568_134688590	0.0208296	GAGAUGA	ENSMUST00000015137.3|Limk1|ENSMUSG00000029674.7|LIM-domain containing, protein kinase
mm10_v2_chr17_-_12769605_12769700	0.0208163	GAGAUGA	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr14_-_15438974_15439002	0.0206328	GAGAUGA	ENSMUST00000055211.4|Lrrc3b|ENSMUSG00000045201.5|leucine rich repeat containing 3B
mm10_v2_chr4_+_136206365_136206405	0.0201205	GAGAUGA	ENSMUST00000047526.7|Asap3|ENSMUSG00000036995.7|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
mm10_v2_chr13_-_99516537_99516602	0.0199969	GAGAUGA	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr1_-_105356658_105356714	0.0195802	GAGAUGA	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr6_+_8209216_8209263	0.0195496	GAGAUGA	ENSMUST00000040017.7|Mios|ENSMUSG00000042447.7|missing oocyte, meiosis regulator, homolog (Drosophila)
mm10_v2_chr12_-_105685235_105685310	0.0194762	GAGAUGA	ENSMUST00000041055.7|Atg2b|ENSMUSG00000041341.9|autophagy related 2B
mm10_v2_chr11_-_103017167_103017179	0.0191285	GAGAUGA	ENSMUST00000021313.2|Dcakd|ENSMUSG00000020935.2|dephospho-CoA kinase domain containing
mm10_v2_chr2_-_161109017_161109027	0.0188984	GAGAUGA	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr6_-_143947092_143947111	0.0186904	GAGAUGA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr7_+_110018301_110018425	0.0183922	GAGAUGA	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr8_+_69822429_69822592	0.0178976	GAGAUGA	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr9_+_31030621_31030700	0.0170803	GAGAUGA	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr5_+_69556924_69557018	0.016778	GAGAUGA	ENSMUST00000087228.4|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae) 	ENSMUST00000031113.6|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae)
mm10_v2_chr7_+_67952817_67952859	0.0161437	GAGAUGA	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr15_-_73184840_73184971	0.0155757	GAGAUGA	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr9_+_62677826_62677843	0.0155369	GAGAUGA	ENSMUST00000034774.8|Itga11|ENSMUSG00000032243.8|integrin alpha 11
mm10_v2_chr6_-_59024470_59024549	0.0150606	GAGAUGA	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr19_+_56287911_56287936	0.0145844	GAGAUGA	ENSMUST00000095948.4|Habp2|ENSMUSG00000025075.8|hyaluronic acid binding protein 2
mm10_v2_chr13_+_112660739_112660795	0.0145679	GAGAUGA	ENSMUST00000052514.4|Slc38a9|ENSMUSG00000047789.4|solute carrier family 38, member 9
mm10_v2_chr4_+_100776664_100776692	0.0141043	GAGAUGA	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chr12_+_4769278_4769338	0.0137044	GAGAUGA	ENSMUST00000020967.4|Pfn4|ENSMUSG00000020639.7|profilin family, member 4
mm10_v2_chr11_+_105589970_105590028	0.0136722	GAGAUGA	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr12_+_52699297_52699411	0.0136221	GAGAUGA	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chrX_+_106187100_106187179	0.0131726	GAGAUGA	ENSMUST00000081593.6|Pgk1|ENSMUSG00000062070.6|phosphoglycerate kinase 1
mm10_v2_chr13_+_54949388_54949481	0.0131571	GAGAUGA	ENSMUST00000026994.7|Unc5a|ENSMUSG00000025876.9|unc-5 homolog A (C. elegans) 	ENSMUST00000109994.2|Unc5a|ENSMUSG00000025876.9|unc-5 homolog A (C. elegans)
mm10_v2_chr12_-_98577940_98578046	0.0130709	GAGAUGA	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr12_+_3426857_3426931	0.0126998	GAGAUGA	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr1_-_106714217_106714330	0.0124062	GAGAUGA	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr4_+_141420757_141420798	0.0123804	GAGAUGA	ENSMUST00000102486.4|Hspb7|ENSMUSG00000006221.7|heat shock protein family, member 7 (cardiovascular)
mm10_v2_chr7_+_128523576_128523598	0.0117144	GAGAUGA	ENSMUST00000033136.7|Bag3|ENSMUSG00000030847.7|BCL2-associated athanogene 3
mm10_v2_chr4_+_129136948_129136999	0.011416	GAGAUGA	ENSMUST00000102600.3|Fndc5|ENSMUSG00000001334.9|fibronectin type III domain containing 5
mm10_v2_chr11_+_23665615_23665697	0.0113162	GAGAUGA	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr7_+_100706702_100706731	0.00990618	GAGAUGA	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr2_-_167188787_167188815	0.00960638	GAGAUGA	ENSMUST00000059826.8|Kcnb1|ENSMUSG00000050556.8|potassium voltage gated channel, Shab-related subfamily, member 1
mm10_v2_chr17_+_3114957_3114982	0.00924531	GAGAUGA	ENSMUST00000076734.6|Scaf8|ENSMUSG00000046201.8|SR-related CTD-associated factor 8
mm10_v2_chr2_-_155930018_155930066	0.00863388	GAGAUGA	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr6_+_122874526_122874573	0.00846107	GAGAUGA	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr15_-_97831460_97831519	0.00784908	GAGAUGA	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr4_+_59805829_59805914	0.00771536	GAGAUGA	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr6_+_134035691_134035717	0.00756788	GAGAUGA	ENSMUST00000081028.6|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene) 	ENSMUST00000111963.1|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene)
mm10_v2_chr1_-_178337774_178337797	0.00727614	GAGAUGA	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr9_+_45838572_45838592	0.00713927	GAGAUGA	ENSMUST00000078111.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1 	ENSMUST00000034591.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1
mm10_v2_chr5_+_32136458_32136505	0.00691767	GAGAUGA	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chr11_+_4873951_4874005	0.00684017	GAGAUGA	ENSMUST00000038570.2|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chr7_+_57590503_57590523	0.00614136	GAGAUGA	ENSMUST00000085240.4|Gabrb3|ENSMUSG00000033676.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm10_v2_chr13_-_93499803_93499825	0.00581543	GAGAUGA	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr17_+_46202740_46202855	0.00577297	GAGAUGA	ENSMUST00000087031.5|Xpo5|ENSMUSG00000067150.5|exportin 5
mm10_v2_chr18_+_42275353_42275392	0.00555334	GAGAUGA	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr1_+_138963709_138963808	0.0055235	GAGAUGA	ENSMUST00000168527.1|Dennd1b|ENSMUSG00000056268.9|DENN/MADD domain containing 1B
mm10_v2_chr7_+_19119853_19119913	0.00551401	GAGAUGA	ENSMUST00000053109.3|Fbxo46|ENSMUSG00000050428.6|F-box protein 46
mm10_v2_chr17_+_86167777_86167795	0.00535683	GAGAUGA	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr3_+_95624971_95625021	0.00517157	GAGAUGA	ENSMUST00000058230.6|Ensa|ENSMUSG00000038619.6|endosulfine alpha 	ENSMUST00000037983.4|Ensa|ENSMUSG00000038619.6|endosulfine alpha
mm10_v2_chr6_-_35539765_35539888	0.00487379	GAGAUGA	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr15_-_50889691_50889714	0.00484799	GAGAUGA	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chrX_-_93832106_93832201	0.00483724	GAGAUGA	ENSMUST00000045748.6|Pdk3|ENSMUSG00000035232.8|pyruvate dehydrogenase kinase, isoenzyme 3
mm10_v2_chr11_-_95309557_95309602	0.00472169	GAGAUGA	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr3_-_144205165_144205220	0.00468076	GAGAUGA	ENSMUST00000120539.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr11_+_58009064_58009144	0.00467303	GAGAUGA	ENSMUST00000071487.6|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1 	ENSMUST00000178636.1|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1
mm10_v2_chr6_+_129533183_129533205	0.00430974	GAGAUGA	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr11_-_115297510_115297519	0.00392341	GAGAUGA	ENSMUST00000056153.7|Fads6|ENSMUSG00000044788.10|fatty acid desaturase domain family, member 6
mm10_v2_chr11_-_34783850_34783900	0.00378093	GAGAUGA	ENSMUST00000093193.5|Dock2|ENSMUSG00000020143.9|dedicator of cyto-kinesis 2 	ENSMUST00000101365.2|Dock2|ENSMUSG00000020143.9|dedicator of cyto-kinesis 2
mm10_v2_chr16_-_94313556_94313577	0.00376467	GAGAUGA	ENSMUST00000163193.1|Hlcs|ENSMUSG00000040820.9|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm10_v2_chr9_-_108190352_108190420	0.0037553	GAGAUGA	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr7_+_27862557_27862557	0.00360311	GAGAUGA	ENSMUST00000053722.8|Zfp607|ENSMUSG00000020420.7|zinc finger proten 607
mm10_v2_chr10_-_43174521_43174569	0.00359739	GAGAUGA	ENSMUST00000040275.7|Sobp|ENSMUSG00000038248.7|sine oculis-binding protein homolog (Drosophila)
mm10_v2_chr18_+_53862087_53862143	0.00358488	GAGAUGA	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr1_-_97661950_97662074	0.00335526	GAGAUGA	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chrX_+_52912232_52912361	0.00302733	GAGAUGA	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chrX_+_7822289_7822289	0.00281443	GAGAUGA	ENSMUST00000009875.4|Kcnd1|ENSMUSG00000009731.4|potassium voltage-gated channel, Shal-related family, member 1
mm10_v2_chr1_+_50927511_50927543	0.00267831	GAGAUGA	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr6_-_71440623_71440645	0.00234581	GAGAUGA	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr8_+_105170668_105170686	0.00221021	GAGAUGA	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr12_-_51691883_51691925	0.00215281	GAGAUGA	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr8_+_31111816_31111891	0.00185377	GAGAUGA	ENSMUST00000046941.7|Rnf122|ENSMUSG00000039328.9|ring finger protein 122
mm10_v2_chr5_+_103425181_103425197	0.00153518	GAGAUGA	ENSMUST00000048957.9|Ptpn13|ENSMUSG00000034573.10|protein tyrosine phosphatase, non-receptor type 13
mm10_v2_chr7_+_44384098_44384154	0.00135274	GAGAUGA	ENSMUST00000118962.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000118831.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr15_+_58933774_58933836	0.00129739	GAGAUGA	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr4_-_126429501_126429556	0.00114513	GAGAUGA	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr10_-_67096931_67096988	0.000995671	GAGAUGA	ENSMUST00000020023.7|Reep3|ENSMUSG00000019873.7|receptor accessory protein 3
mm10_v2_chr15_-_96699698_96699717	0.000695415	GAGAUGA	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr19_-_12796108_12796146	0.000394103	GAGAUGA	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr17_-_10319324_10319380	0.000355053	GAGAUGA	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr2_+_71786923_71786978	0.000318913	GAGAUGA	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr16_+_42907563_42907684	0.000285422	GAGAUGA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr12_+_3807017_3807063	0.000228834	GAGAUGA	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr11_+_30771726_30771792	0.000102662	GAGAUGA	ENSMUST00000041231.7|Psme4|ENSMUSG00000040850.11|proteasome (prosome, macropain) activator subunit 4
