mm10_v2_chr18_+_22345089_22345089	0.560523	GCAGCAU	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr9_+_107935876_107935938	0.557913	GCAGCAU	ENSMUST00000035700.8|Camkv|ENSMUSG00000032936.8|CaM kinase-like vesicle-associated
mm10_v2_chr5_+_30711564_30711586	0.504608	GCAGCAU	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr5_+_33995984_33996030	0.444105	GCAGCAU	ENSMUST00000056355.8|Nat8l|ENSMUSG00000048142.8|N-acetyltransferase 8-like
mm10_v2_chr3_-_73056943_73056943	0.411134	GCAGCAU	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr7_+_16130285_16130333	0.402748	GCAGCAU	ENSMUST00000168693.1|Slc8a2|ENSMUSG00000030376.7|solute carrier family 8 (sodium/calcium exchanger), member 2
mm10_v2_chr14_+_45351473_45351473	0.369788	GCAGCAU	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr9_-_61946768_61946799	0.337689	GCAGCAU	ENSMUST00000034815.7|Kif23|ENSMUSG00000032254.9|kinesin family member 23
mm10_v2_chr7_-_127021205_127021216	0.312662	GCAGCAU	ENSMUST00000159916.1|Prrt2|ENSMUSG00000045114.7|proline-rich transmembrane protein 2
mm10_v2_chr3_-_108415552_108415552	0.3107	GCAGCAU	ENSMUST00000090558.3|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr18_-_43687695_43687773	0.309323	GCAGCAU	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr9_-_22052021_22052026	0.297504	GCAGCAU	ENSMUST00000003501.7|Elavl3|ENSMUSG00000003410.7|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm10_v2_chr1_+_15712303_15712303	0.293711	GCAGCAU	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr14_+_116925291_116925362	0.285802	GCAGCAU	ENSMUST00000078849.4|Gpc6|ENSMUSG00000058571.4|glypican 6
mm10_v2_chr4_+_101419277_101419332	0.279294	GCAGCAU	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr13_+_46418266_46418316	0.279209	GCAGCAU	ENSMUST00000037923.3|Rbm24|ENSMUSG00000038132.5|RNA binding motif protein 24
mm10_v2_chr11_-_90390895_90390926	0.278982	GCAGCAU	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr10_-_127263346_127263368	0.253561	GCAGCAU	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr11_+_98907801_98907824	0.239991	GCAGCAU	ENSMUST00000092706.6|Cdc6|ENSMUSG00000017499.9|cell division cycle 6
mm10_v2_chr13_-_36734450_36734492	0.228573	GCAGCAU	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr2_-_42653598_42653598	0.228457	GCAGCAU	ENSMUST00000052550.6|Lrp1b|ENSMUSG00000049252.11|low density lipoprotein-related protein 1B (deleted in tumors)
mm10_v2_chr5_-_38159457_38159491	0.20955	GCAGCAU	ENSMUST00000031009.4|Nsg1|ENSMUSG00000029126.4|neuron specific gene family member 1
mm10_v2_chr11_+_79591120_79591224	0.20937	GCAGCAU	ENSMUST00000017783.6|Rab11fip4|ENSMUSG00000017639.7|RAB11 family interacting protein 4 (class II)
mm10_v2_chr9_-_70141484_70141578	0.206107	GCAGCAU	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr15_-_73184840_73184971	0.205382	GCAGCAU	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr9_-_48835932_48835962	0.204899	GCAGCAU	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr5_+_3343893_3343945	0.204025	GCAGCAU	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr1_-_9700209_9700329	0.202658	GCAGCAU	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr15_+_102073773_102073903	0.200219	GCAGCAU	ENSMUST00000169681.1|Eif4b|ENSMUSG00000058655.8|eukaryotic translation initiation factor 4B
mm10_v2_chr2_+_65620829_65620857	0.192889	GCAGCAU	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr2_-_152951456_152951540	0.188809	GCAGCAU	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr7_-_116237767_116237781	0.187091	GCAGCAU	ENSMUST00000182834.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr17_+_27556613_27556635	0.178945	GCAGCAU	ENSMUST00000117600.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000114888.3|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr5_-_96161990_96162097	0.177982	GCAGCAU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr3_+_129532386_129532440	0.174131	GCAGCAU	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr2_+_5951440_5951469	0.172284	GCAGCAU	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr7_-_38107490_38107534	0.170113	GCAGCAU	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr16_-_30388530_30388530	0.166464	GCAGCAU	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr9_+_95559817_95559960	0.16137	GCAGCAU	ENSMUST00000079597.5|Paqr9|ENSMUSG00000064225.5|progestin and adipoQ receptor family member IX
mm10_v2_chrX_+_159532674_159532748	0.158729	GCAGCAU	ENSMUST00000057180.6|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chr13_-_96132568_96132628	0.157126	GCAGCAU	ENSMUST00000161263.1|Sv2c|ENSMUSG00000051111.9|synaptic vesicle glycoprotein 2c
mm10_v2_chr10_-_53379816_53379858	0.154196	GCAGCAU	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr2_+_5845017_5845062	0.152839	GCAGCAU	ENSMUST00000026927.3|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENSMUST00000179748.1|Nudt5|ENSMUSG00000025817.6|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm10_v2_chr6_-_127769427_127769472	0.151132	GCAGCAU	ENSMUST00000032500.8|Prmt8|ENSMUSG00000030350.8|protein arginine N-methyltransferase 8
mm10_v2_chr1_+_156558844_156559049	0.149107	GCAGCAU	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr3_+_51415986_51416044	0.148888	GCAGCAU	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr9_+_72532214_72532271	0.146559	GCAGCAU	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr19_-_31765027_31765079	0.140542	GCAGCAU	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr2_+_156196642_156196775	0.137701	GCAGCAU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr19_+_18670780_18670810	0.137377	GCAGCAU	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr6_+_4747306_4747372	0.136731	GCAGCAU	ENSMUST00000175823.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000176204.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000166678.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr4_-_45084538_45084604	0.136617	GCAGCAU	ENSMUST00000052236.6|Fbxo10|ENSMUSG00000048232.6|F-box protein 10
mm10_v2_chr6_+_124996681_124996756	0.136156	GCAGCAU	ENSMUST00000032479.4|Pianp|ENSMUSG00000030329.5|PILR alpha associated neural protein
mm10_v2_chr5_+_146384947_146384994	0.13532	GCAGCAU	ENSMUST00000110600.1|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3 	ENSMUST00000016143.7|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3
mm10_v2_chr13_+_49682100_49682169	0.13428	GCAGCAU	ENSMUST00000165316.1|Iars|ENSMUSG00000037851.7|isoleucine-tRNA synthetase 	ENSMUST00000047363.7|Iars|ENSMUSG00000037851.7|isoleucine-tRNA synthetase
mm10_v2_chr15_+_89253035_89253035	0.133871	GCAGCAU	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chrX_-_157492280_157492340	0.132455	GCAGCAU	ENSMUST00000112529.1|Sms|ENSMUSG00000071708.5|spermine synthase
mm10_v2_chrX_-_142966709_142966734	0.129238	GCAGCAU	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr2_-_110950923_110950923	0.126286	GCAGCAU	ENSMUST00000099623.3|Ano3|ENSMUSG00000074968.5|anoctamin 3
mm10_v2_chr10_-_45470201_45470260	0.126243	GCAGCAU	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr15_-_79742518_79742562	0.125683	GCAGCAU	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr12_-_98901478_98901492	0.123293	GCAGCAU	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr18_+_23954668_23954704	0.121201	GCAGCAU	ENSMUST00000060762.4|Zfp397|ENSMUSG00000024276.6|zinc finger protein 397
mm10_v2_chr2_+_119897212_119897305	0.117085	GCAGCAU	ENSMUST00000046717.6|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110774.1|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110773.2|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000079934.5|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000156510.1|Mga|ENSMUSG00000033943.9|MAX gene associated
mm10_v2_chr5_+_138085083_138085147	0.116327	GCAGCAU	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr14_-_31417666_31417678	0.115895	GCAGCAU	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr10_+_128377086_128377155	0.115354	GCAGCAU	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr18_-_10030017_10030146	0.113131	GCAGCAU	ENSMUST00000116669.1|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14 	ENSMUST00000092096.6|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14
mm10_v2_chr11_-_87359011_87359081	0.113126	GCAGCAU	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr11_+_70017085_70017146	0.11113	GCAGCAU	ENSMUST00000108589.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr18_+_68300351_68300422	0.110532	GCAGCAU	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chr17_-_81649607_81649607	0.109748	GCAGCAU	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr14_+_34819811_34819834	0.108613	GCAGCAU	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr14_+_34310727_34310778	0.1068	GCAGCAU	ENSMUST00000022322.9|Glud1|ENSMUSG00000021794.9|glutamate dehydrogenase 1
mm10_v2_chr16_+_42907563_42907684	0.105828	GCAGCAU	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr1_-_74951651_74951678	0.104459	GCAGCAU	ENSMUST00000164097.1|Ihh|ENSMUSG00000006538.9|Indian hedgehog
mm10_v2_chr10_-_22731336_22731447	0.104124	GCAGCAU	ENSMUST00000127698.1|Tbpl1|ENSMUSG00000071359.7|TATA box binding protein-like 1
mm10_v2_chr11_-_120824098_120824178	0.101369	GCAGCAU	ENSMUST00000055655.7|Fasn|ENSMUSG00000025153.8|fatty acid synthase
mm10_v2_chr4_+_128993224_128993290	0.100226	GCAGCAU	ENSMUST00000030583.6|Ak2|ENSMUSG00000028792.8|adenylate kinase 2 	ENSMUST00000102604.4|Ak2|ENSMUSG00000028792.8|adenylate kinase 2
mm10_v2_chr4_-_151044564_151044691	0.0999825	GCAGCAU	ENSMUST00000103204.4|Per3|ENSMUSG00000028957.6|period circadian clock 3
mm10_v2_chr4_+_13743424_13743478	0.0999777	GCAGCAU	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr10_+_83543941_83544007	0.0999632	GCAGCAU	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr2_-_125859139_125859221	0.0997927	GCAGCAU	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr5_+_105876532_105876585	0.0991528	GCAGCAU	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr11_-_5381734_5381745	0.09689	GCAGCAU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr8_-_125492710_125492710	0.0948684	GCAGCAU	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr2_-_65567465_65567495	0.0938729	GCAGCAU	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr17_+_27655572_27655622	0.0938452	GCAGCAU	ENSMUST00000045896.3|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr5_-_32854185_32854256	0.0934813	GCAGCAU	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr11_-_121388186_121388267	0.0910144	GCAGCAU	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr17_+_3114957_3114982	0.0858512	GCAGCAU	ENSMUST00000076734.6|Scaf8|ENSMUSG00000046201.8|SR-related CTD-associated factor 8
mm10_v2_chr16_-_76373827_76373852	0.0825126	GCAGCAU	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr10_+_128092771_128092819	0.0819625	GCAGCAU	ENSMUST00000170054.2|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A 	ENSMUST00000045621.8|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A
mm10_v2_chr4_+_57637816_57637846	0.0816736	GCAGCAU	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr8_+_79028587_79028654	0.0814097	GCAGCAU	ENSMUST00000119254.1|Zfp827|ENSMUSG00000071064.7|zinc finger protein 827
mm10_v2_chrX_-_73966329_73966376	0.079558	GCAGCAU	ENSMUST00000114372.2|Hcfc1|ENSMUSG00000031386.8|host cell factor C1 	ENSMUST00000033761.6|Hcfc1|ENSMUSG00000031386.8|host cell factor C1
mm10_v2_chr7_+_92741603_92741715	0.079426	GCAGCAU	ENSMUST00000032879.7|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family
mm10_v2_chr11_-_42000834_42000867	0.0729358	GCAGCAU	ENSMUST00000070725.4|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr11_+_101176041_101176041	0.0721244	GCAGCAU	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chr9_+_44043384_44043434	0.0716655	GCAGCAU	ENSMUST00000114840.1|Thy1|ENSMUSG00000032011.4|thymus cell antigen 1, theta
mm10_v2_chr3_+_22076644_22076681	0.0705296	GCAGCAU	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr8_+_22476700_22476734	0.0691445	GCAGCAU	ENSMUST00000067786.7|Slc20a2|ENSMUSG00000037656.8|solute carrier family 20, member 2
mm10_v2_chr6_+_56714891_56714951	0.067704	GCAGCAU	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr15_+_79141324_79141358	0.0674852	GCAGCAU	ENSMUST00000040077.6|Polr2f|ENSMUSG00000033020.6|polymerase (RNA) II (DNA directed) polypeptide F
mm10_v2_chr3_+_107101551_107101567	0.0669393	GCAGCAU	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr15_-_58076183_58076245	0.0665609	GCAGCAU	ENSMUST00000177504.2|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000176076.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177176.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177276.1|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1 	ENSMUST00000175805.2|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1
mm10_v2_chr4_+_59626189_59626253	0.0664931	GCAGCAU	ENSMUST00000070150.4|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene 	ENSMUST00000052420.6|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene
mm10_v2_chr13_-_103764502_103764505	0.0663181	GCAGCAU	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chr6_+_5725639_5725801	0.0661818	GCAGCAU	ENSMUST00000115556.1|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1 	ENSMUST00000115555.1|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1 	ENSMUST00000115559.3|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1
mm10_v2_chr10_+_69533761_69533776	0.0659666	GCAGCAU	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr16_+_45224315_45224346	0.065896	GCAGCAU	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr17_+_86167777_86167795	0.0646701	GCAGCAU	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr2_+_49619277_49619343	0.0642111	GCAGCAU	ENSMUST00000028102.7|Kif5c|ENSMUSG00000026764.9|kinesin family member 5C
mm10_v2_chr11_-_116412965_116413004	0.0639003	GCAGCAU	ENSMUST00000100202.3|Rnf157|ENSMUSG00000052949.8|ring finger protein 157 	ENSMUST00000106398.2|Rnf157|ENSMUSG00000052949.8|ring finger protein 157
mm10_v2_chr15_-_91049823_91049948	0.0626928	GCAGCAU	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr7_-_73541738_73541758	0.0626543	GCAGCAU	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr10_+_67979569_67979575	0.0621389	GCAGCAU	ENSMUST00000118160.1|Rtkn2|ENSMUSG00000037846.12|rhotekin 2
mm10_v2_chr2_+_149830788_149830807	0.0620678	GCAGCAU	ENSMUST00000109935.1|Syndig1|ENSMUSG00000074736.4|synapse differentiation inducing 1
mm10_v2_chr10_+_80622677_80622780	0.0609993	GCAGCAU	ENSMUST00000079773.6|Csnk1g2|ENSMUSG00000003345.9|casein kinase 1, gamma 2
mm10_v2_chr2_-_114201416_114201469	0.0609014	GCAGCAU	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr14_-_26971232_26971232	0.0603166	GCAGCAU	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr7_+_98494222_98494222	0.0601867	GCAGCAU	ENSMUST00000165205.1|Lrrc32|ENSMUSG00000090958.1|leucine rich repeat containing 32
mm10_v2_chr2_+_69897220_69897247	0.0598751	GCAGCAU	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr11_+_78512193_78512237	0.0593627	GCAGCAU	ENSMUST00000001127.4|Poldip2|ENSMUSG00000001100.4|polymerase (DNA-directed), delta interacting protein 2
mm10_v2_chr12_+_111166349_111166397	0.0586361	GCAGCAU	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr3_+_145987835_145987901	0.058524	GCAGCAU	ENSMUST00000039517.6|Syde2|ENSMUSG00000036863.7|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm10_v2_chr13_-_51567084_51567084	0.0569822	GCAGCAU	ENSMUST00000021898.5|Shc3|ENSMUSG00000021448.6|src homology 2 domain-containing transforming protein C3
mm10_v2_chr11_-_76846968_76847045	0.0569109	GCAGCAU	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr16_-_92466081_92466187	0.0563733	GCAGCAU	ENSMUST00000060005.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr19_+_41482632_41482688	0.0555628	GCAGCAU	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr1_-_195092242_195092253	0.0547078	GCAGCAU	ENSMUST00000162650.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000160817.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000162614.1|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein 	ENSMUST00000016637.6|Cd46|ENSMUSG00000016493.7|CD46 antigen, complement regulatory protein
mm10_v2_chr4_+_148591482_148591546	0.0540006	GCAGCAU	ENSMUST00000006611.8|Srm|ENSMUSG00000006442.10|spermidine synthase
mm10_v2_chr11_-_115603866_115604051	0.0538217	GCAGCAU	ENSMUST00000125097.1|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3 	ENSMUST00000106508.3|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3 	ENSMUST00000019135.7|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm10_v2_chr18_+_10725530_10725564	0.0534707	GCAGCAU	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr11_+_73018986_73019047	0.0532125	GCAGCAU	ENSMUST00000092937.6|Camkk1|ENSMUSG00000020785.11|calcium/calmodulin-dependent protein kinase kinase 1, alpha
mm10_v2_chr19_+_5490475_5490487	0.051648	GCAGCAU	ENSMUST00000116560.2|Cfl1|ENSMUSG00000056201.6|cofilin 1, non-muscle
mm10_v2_chr12_+_4769278_4769338	0.0493406	GCAGCAU	ENSMUST00000020967.4|Pfn4|ENSMUSG00000020639.7|profilin family, member 4
mm10_v2_chr12_-_4038905_4038957	0.0489857	GCAGCAU	ENSMUST00000111178.1|Efr3b|ENSMUSG00000020658.9|EFR3 homolog B (S. cerevisiae)
mm10_v2_chr3_+_94954075_94954226	0.0476561	GCAGCAU	ENSMUST00000107260.2|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000142311.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000137088.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000152869.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107254.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107253.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression)
mm10_v2_chr13_+_118714678_118714701	0.0474995	GCAGCAU	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr11_+_74770822_74770876	0.0468738	GCAGCAU	ENSMUST00000141755.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16 	ENSMUST00000010698.6|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr1_+_171767123_171767138	0.0468393	GCAGCAU	ENSMUST00000015460.4|Slamf1|ENSMUSG00000015316.10|signaling lymphocytic activation molecule family member 1
mm10_v2_chr7_-_105399991_105400054	0.0460989	GCAGCAU	ENSMUST00000118726.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000074686.7|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000122327.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000179474.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000048079.6|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2
mm10_v2_chr11_-_75348261_75348324	0.045982	GCAGCAU	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chr2_+_112379204_112379253	0.045836	GCAGCAU	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr9_-_52168111_52168111	0.044843	GCAGCAU	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr6_-_51469869_51469894	0.0444773	GCAGCAU	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr4_-_44167580_44167608	0.0443242	GCAGCAU	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr8_+_105276438_105276482	0.0434459	GCAGCAU	ENSMUST00000014920.6|Nol3|ENSMUSG00000014776.6|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm10_v2_chr1_+_66468364_66468435	0.0430006	GCAGCAU	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr4_-_126468580_126468653	0.0428897	GCAGCAU	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr4_+_108619925_108619994	0.0428616	GCAGCAU	ENSMUST00000030320.6|Cc2d1b|ENSMUSG00000028582.8|coiled-coil and C2 domain containing 1B
mm10_v2_chr2_+_153741274_153741294	0.0427501	GCAGCAU	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr5_-_3803081_3803119	0.0424895	GCAGCAU	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr16_+_58408443_58408523	0.0420692	GCAGCAU	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr2_+_130012336_130012350	0.0413274	GCAGCAU	ENSMUST00000110299.2|Tgm3|ENSMUSG00000027401.9|transglutaminase 3, E polypeptide
mm10_v2_chr12_-_100725028_100725081	0.0411697	GCAGCAU	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chrX_-_7188713_7188743	0.0409401	GCAGCAU	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr18_+_53245618_53245662	0.0408886	GCAGCAU	ENSMUST00000165032.1|Snx24|ENSMUSG00000024535.9|sorting nexing 24
mm10_v2_chr19_-_14597983_14598016	0.0393598	GCAGCAU	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr5_+_34761734_34761780	0.0386245	GCAGCAU	ENSMUST00000080036.2|Htt|ENSMUSG00000029104.9|huntingtin
mm10_v2_chr4_+_85205417_85205535	0.0384725	GCAGCAU	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr1_-_119837613_119837673	0.038139	GCAGCAU	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr2_+_129065934_129065994	0.0380493	GCAGCAU	ENSMUST00000035812.7|Ttl|ENSMUSG00000027394.7|tubulin tyrosine ligase
mm10_v2_chr8_-_104443001_104443047	0.0379089	GCAGCAU	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr13_+_109903089_109903110	0.0374561	GCAGCAU	ENSMUST00000120664.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr14_-_33447142_33447179	0.0370859	GCAGCAU	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr14_-_122465677_122465677	0.0365303	GCAGCAU	ENSMUST00000039118.6|Zic5|ENSMUSG00000041703.7|zinc finger protein of the cerebellum 5
mm10_v2_chr2_+_3118335_3118392	0.0361375	GCAGCAU	ENSMUST00000115099.2|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr15_+_81744848_81744848	0.035833	GCAGCAU	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr12_+_12262139_12262157	0.0356995	GCAGCAU	ENSMUST00000069066.6|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A 	ENSMUST00000069005.8|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A
mm10_v2_chr3_-_119783262_119783388	0.0345202	GCAGCAU	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr9_-_107609215_107609246	0.0343269	GCAGCAU	ENSMUST00000102532.3|Sema3b|ENSMUSG00000057969.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
mm10_v2_chr1_-_131245167_131245258	0.0340552	GCAGCAU	ENSMUST00000027688.8|Rassf5|ENSMUSG00000026430.9|Ras association (RalGDS/AF-6) domain family member 5 	ENSMUST00000112442.1|Rassf5|ENSMUSG00000026430.9|Ras association (RalGDS/AF-6) domain family member 5
mm10_v2_chrX_-_36989656_36989674	0.0326032	GCAGCAU	ENSMUST00000060474.7|Sept6|ENSMUSG00000050379.9|septin 6 	ENSMUST00000053456.4|Sept6|ENSMUSG00000050379.9|septin 6 	ENSMUST00000115239.3|Sept6|ENSMUSG00000050379.9|septin 6
mm10_v2_chr6_-_99266494_99266540	0.0325515	GCAGCAU	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr2_-_161109017_161109027	0.0319821	GCAGCAU	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr14_-_45388772_45388836	0.0318585	GCAGCAU	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr18_+_20944607_20944625	0.0307728	GCAGCAU	ENSMUST00000050004.1|Rnf125|ENSMUSG00000033107.5|ring finger protein 125
mm10_v2_chr15_+_80711292_80711340	0.0302037	GCAGCAU	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr16_+_32332238_32332266	0.0291293	GCAGCAU	ENSMUST00000115151.3|Ubxn7|ENSMUSG00000053774.8|UBX domain protein 7
mm10_v2_chr9_+_21546842_21546936	0.0286922	GCAGCAU	ENSMUST00000034703.8|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115395.3|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115394.1|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1
mm10_v2_chr19_-_45816007_45816076	0.026263	GCAGCAU	ENSMUST00000079431.3|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000026247.6|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000162528.2|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr6_-_39206782_39206831	0.0256842	GCAGCAU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr14_+_17660956_17660963	0.025153	GCAGCAU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr18_+_53862087_53862143	0.025137	GCAGCAU	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr11_+_97362396_97362551	0.0242561	GCAGCAU	ENSMUST00000045540.3|Socs7|ENSMUSG00000038485.5|suppressor of cytokine signaling 7
mm10_v2_chr11_+_72689997_72690015	0.0229691	GCAGCAU	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr3_+_152210458_152210534	0.0225419	GCAGCAU	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr14_+_56887795_56887795	0.0221484	GCAGCAU	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr4_-_58912678_58912776	0.022043	GCAGCAU	ENSMUST00000144512.1|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000102889.3|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000055822.8|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180
mm10_v2_chr19_+_38395980_38396022	0.0215547	GCAGCAU	ENSMUST00000054098.2|Slc35g1|ENSMUSG00000044026.2|solute carrier family 35, member G1
mm10_v2_chr12_-_45074112_45074306	0.0214921	GCAGCAU	ENSMUST00000120531.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn) 	ENSMUST00000143376.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chrX_+_81070646_81070740	0.0209621	GCAGCAU	ENSMUST00000171953.1|Tmem47|ENSMUSG00000025666.10|transmembrane protein 47 	ENSMUST00000026760.2|Tmem47|ENSMUSG00000025666.10|transmembrane protein 47
mm10_v2_chr9_+_35421541_35421616	0.0208499	GCAGCAU	ENSMUST00000119129.2|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr12_-_46818749_46818788	0.0208131	GCAGCAU	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr12_+_59066908_59066931	0.0207445	GCAGCAU	ENSMUST00000021381.4|Pnn|ENSMUSG00000020994.4|pinin
mm10_v2_chr3_+_88142328_88142483	0.0206384	GCAGCAU	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr11_-_104550460_104550560	0.0203363	GCAGCAU	ENSMUST00000106961.1|Cdc27|ENSMUSG00000020687.7|cell division cycle 27 	ENSMUST00000093923.2|Cdc27|ENSMUSG00000020687.7|cell division cycle 27
mm10_v2_chr8_+_93810832_93810843	0.0201465	GCAGCAU	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr3_+_101377074_101377158	0.0201441	GCAGCAU	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr3_-_75556759_75556871	0.0197823	GCAGCAU	ENSMUST00000162138.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000029424.5|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000161137.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10
mm10_v2_chr7_+_59228743_59228769	0.0195895	GCAGCAU	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr10_+_7681197_7681225	0.0192576	GCAGCAU	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr13_-_113618549_113618565	0.0183879	GCAGCAU	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr15_-_10713537_10713544	0.0182715	GCAGCAU	ENSMUST00000090339.3|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr11_-_20112876_20112925	0.0178353	GCAGCAU	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chr5_+_117841839_117841857	0.0178168	GCAGCAU	ENSMUST00000142742.2|Nos1|ENSMUSG00000029361.12|nitric oxide synthase 1, neuronal
mm10_v2_chr3_+_9250602_9250602	0.01781	GCAGCAU	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr18_-_37969742_37969782	0.0176547	GCAGCAU	ENSMUST00000166148.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000163131.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000043437.7|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1
mm10_v2_chrX_+_112604274_112604274	0.0173903	GCAGCAU	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr1_-_134079114_134079120	0.0172484	GCAGCAU	ENSMUST00000020692.6|Btg2|ENSMUSG00000020423.6|B cell translocation gene 2, anti-proliferative
mm10_v2_chr5_-_123684289_123684379	0.0172243	GCAGCAU	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr15_-_76069681_76069759	0.0163324	GCAGCAU	ENSMUST00000002603.5|Scrib|ENSMUSG00000022568.10|scribbled homolog (Drosophila) 	ENSMUST00000063747.5|Scrib|ENSMUSG00000022568.10|scribbled homolog (Drosophila)
mm10_v2_chr2_+_155775333_155775392	0.0162326	GCAGCAU	ENSMUST00000029141.5|Mmp24|ENSMUSG00000027612.7|matrix metallopeptidase 24
mm10_v2_chr15_+_76351303_76351337	0.0153666	GCAGCAU	ENSMUST00000023212.8|Maf1|ENSMUSG00000022553.9|MAF1 homolog (S. cerevisiae) 	ENSMUST00000160172.1|Maf1|ENSMUSG00000022553.9|MAF1 homolog (S. cerevisiae)
mm10_v2_chrX_+_75514299_75514316	0.0149081	GCAGCAU	ENSMUST00000114070.3|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1 	ENSMUST00000033540.5|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1
mm10_v2_chr19_-_59943647_59943678	0.0141661	GCAGCAU	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr19_-_19001099_19001119	0.0141599	GCAGCAU	ENSMUST00000040153.8|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta 	ENSMUST00000112828.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr14_+_14012491_14012693	0.0138982	GCAGCAU	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr12_-_102878406_102878449	0.0133286	GCAGCAU	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr3_+_146852359_146852438	0.0126634	GCAGCAU	ENSMUST00000038090.5|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7 	ENSMUST00000170055.1|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7
mm10_v2_chr7_-_80402743_80402762	0.0124853	GCAGCAU	ENSMUST00000122232.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr11_+_80477015_80477085	0.0121241	GCAGCAU	ENSMUST00000053413.10|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35) 	ENSMUST00000147694.1|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
mm10_v2_chr3_+_94974728_94974753	0.0119922	GCAGCAU	ENSMUST00000072287.5|Pi4kb|ENSMUSG00000038861.8|phosphatidylinositol 4-kinase, catalytic, beta polypeptide
mm10_v2_chr11_-_97187872_97187926	0.011298	GCAGCAU	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr10_+_63243785_63243846	0.0112941	GCAGCAU	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr8_+_121730563_121730589	0.0110819	GCAGCAU	ENSMUST00000026357.5|Jph3|ENSMUSG00000025318.7|junctophilin 3
mm10_v2_chr11_+_107547925_107547968	0.0107329	GCAGCAU	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr13_-_98891036_98891063	0.0104332	GCAGCAU	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr1_+_64690443_64690467	0.00963897	GCAGCAU	ENSMUST00000114077.1|Ccnyl1|ENSMUSG00000070871.4|cyclin Y-like 1
mm10_v2_chr19_-_37207293_37207508	0.00934569	GCAGCAU	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr7_-_123369870_123369920	0.00931281	GCAGCAU	ENSMUST00000106442.2|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000098060.3|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000167309.1|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17
mm10_v2_chr11_+_75588064_75588151	0.00864241	GCAGCAU	ENSMUST00000143219.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha 	ENSMUST00000179521.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha 	ENSMUST00000179445.1|Pitpna|ENSMUSG00000017781.11|phosphatidylinositol transfer protein, alpha
mm10_v2_chrX_-_41911877_41911912	0.00849777	GCAGCAU	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chrX_-_74085586_74085652	0.00833981	GCAGCAU	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr9_+_102506072_102506138	0.00817016	GCAGCAU	ENSMUST00000039390.4|Ky|ENSMUSG00000035606.7|kyphoscoliosis peptidase
mm10_v2_chr4_-_133967893_133967951	0.00811018	GCAGCAU	ENSMUST00000100472.3|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2 	ENSMUST00000136327.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr7_+_82335732_82335732	0.00806079	GCAGCAU	ENSMUST00000173287.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr4_+_57845240_57845265	0.00794044	GCAGCAU	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr11_+_17159263_17159357	0.0070506	GCAGCAU	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr9_-_57467985_57468074	0.00674694	GCAGCAU	ENSMUST00000046587.6|Scamp5|ENSMUSG00000040722.6|secretory carrier membrane protein 5
mm10_v2_chr5_-_5266038_5266292	0.00664339	GCAGCAU	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr6_-_120493807_120493913	0.00659239	GCAGCAU	ENSMUST00000178687.1|Cecr6|ENSMUSG00000094626.1|cat eye syndrome chromosome region, candidate 6
mm10_v2_chr2_-_33431324_33431324	0.00648437	GCAGCAU	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr17_-_75551838_75551946	0.00630761	GCAGCAU	ENSMUST00000112507.3|Fam98a|ENSMUSG00000002017.9|family with sequence similarity 98, member A
mm10_v2_chr7_+_49246812_49246844	0.00628096	GCAGCAU	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr17_-_24479034_24479083	0.00610223	GCAGCAU	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr15_+_32920723_32920826	0.00435615	GCAGCAU	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr6_-_39725448_39725478	0.00408839	GCAGCAU	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr2_-_103797617_103797662	0.00358728	GCAGCAU	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr12_+_53248677_53248677	0.00337905	GCAGCAU	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr2_+_76406529_76406580	0.0028907	GCAGCAU	ENSMUST00000111929.1|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000077972.4|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000111930.2|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6
mm10_v2_chr6_+_113483297_113483316	0.00265007	GCAGCAU	ENSMUST00000032422.5|Creld1|ENSMUSG00000030284.5|cysteine-rich with EGF-like domains 1
mm10_v2_chr4_-_141723401_141723436	0.00254491	GCAGCAU	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr11_+_87592145_87592229	0.00249336	GCAGCAU	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr15_-_94589870_94589889	0.00227223	GCAGCAU	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr2_+_49451486_49451559	0.00176358	GCAGCAU	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr19_+_40831248_40831292	0.0017463	GCAGCAU	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr1_+_160906372_160906460	0.00148928	GCAGCAU	ENSMUST00000161609.1|Rc3h1|ENSMUSG00000040423.4|RING CCCH (C3H) domains 1
mm10_v2_chr1_-_25228814_25228834	0.00124505	GCAGCAU	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr13_+_34875488_34875515	0.00117581	GCAGCAU	ENSMUST00000077853.3|Prpf4b|ENSMUSG00000021413.8|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm10_v2_chr18_+_62324204_62324248	0.00110893	GCAGCAU	ENSMUST00000027560.6|Htr4|ENSMUSG00000026322.8|5 hydroxytryptamine (serotonin) receptor 4
mm10_v2_chr17_-_15375969_15375983	0.00109799	GCAGCAU	ENSMUST00000014917.7|Dll1|ENSMUSG00000014773.7|delta-like 1 (Drosophila)
mm10_v2_chr3_-_9004686_9004750	0.00107693	GCAGCAU	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr11_+_79993062_79993122	0.00105623	GCAGCAU	ENSMUST00000017692.8|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila) 	ENSMUST00000163272.1|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila)
mm10_v2_chr2_-_6884975_6884996	0.00102738	GCAGCAU	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
