mm10_v2_chr2_+_32587057_32587123	1.19285	GCUGGUG	ENSMUST00000102818.4|St6galnac4|ENSMUSG00000079442.6|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm10_v2_chr18_+_22345089_22345089	1.07135	GCUGGUG	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr12_-_108275409_108275417	0.954976	GCUGGUG	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr6_+_55451978_55452057	0.935229	GCUGGUG	ENSMUST00000070736.5|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1 	ENSMUST00000070756.5|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1 	ENSMUST00000166962.1|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1
mm10_v2_chr11_-_119547744_119547759	0.930131	GCUGGUG	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr7_+_45163915_45163926	0.724422	GCUGGUG	ENSMUST00000085374.5|Slc17a7|ENSMUSG00000070570.4|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm10_v2_chr12_+_76324860_76324898	0.722648	GCUGGUG	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr6_+_141249161_141249269	0.640062	GCUGGUG	ENSMUST00000043259.7|Pde3a|ENSMUSG00000041741.8|phosphodiesterase 3A, cGMP inhibited
mm10_v2_chr7_-_38107490_38107534	0.632793	GCUGGUG	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr2_+_25054355_25054391	0.631164	GCUGGUG	ENSMUST00000100334.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000152122.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000116574.3|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000006646.8|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chr13_-_28953690_28953713	0.62981	GCUGGUG	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr15_-_79687776_79687894	0.626993	GCUGGUG	ENSMUST00000023061.5|Josd1|ENSMUSG00000022426.5|Josephin domain containing 1
mm10_v2_chr15_-_103340085_103340100	0.62343	GCUGGUG	ENSMUST00000168828.1|Zfp385a|ENSMUSG00000000552.9|zinc finger protein 385A
mm10_v2_chr9_+_32116040_32116136	0.612365	GCUGGUG	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr4_-_136956784_136956871	0.603714	GCUGGUG	ENSMUST00000030420.8|Epha8|ENSMUSG00000028661.8|Eph receptor A8
mm10_v2_chr3_+_90341654_90341654	0.596619	GCUGGUG	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr5_-_96161990_96162097	0.569116	GCUGGUG	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr10_-_81482655_81482725	0.560066	GCUGGUG	ENSMUST00000120508.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5 	ENSMUST00000118763.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5
mm10_v2_chr14_+_27238018_27238046	0.554721	GCUGGUG	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr2_-_157079212_157079276	0.541424	GCUGGUG	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr13_-_54766553_54766595	0.533668	GCUGGUG	ENSMUST00000036825.7|Sncb|ENSMUSG00000034891.7|synuclein, beta
mm10_v2_chr4_+_9269285_9269335	0.532592	GCUGGUG	ENSMUST00000038841.7|Clvs1|ENSMUSG00000041216.9|clavesin 1
mm10_v2_chr7_+_18925863_18925899	0.519924	GCUGGUG	ENSMUST00000172835.1|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2 	ENSMUST00000032571.8|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2
mm10_v2_chr8_+_46617426_46617449	0.510967	GCUGGUG	ENSMUST00000093517.5|Casp3|ENSMUSG00000031628.8|caspase 3
mm10_v2_chr9_+_107587711_107587746	0.487899	GCUGGUG	ENSMUST00000010192.5|Ifrd2|ENSMUSG00000010048.5|interferon-related developmental regulator 2
mm10_v2_chr19_+_47014672_47014698	0.479922	GCUGGUG	ENSMUST00000037636.3|Ina|ENSMUSG00000034336.3|internexin neuronal intermediate filament protein, alpha
mm10_v2_chr19_-_46327121_46327156	0.453179	GCUGGUG	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr5_-_121836852_121836880	0.438091	GCUGGUG	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr6_+_120666388_120666424	0.437501	GCUGGUG	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr5_-_72504433_72504520	0.394996	GCUGGUG	ENSMUST00000175766.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000177290.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000176974.1|Corin|ENSMUSG00000005220.4|corin 	ENSMUST00000167460.2|Corin|ENSMUSG00000005220.4|corin
mm10_v2_chr5_-_134688568_134688590	0.394153	GCUGGUG	ENSMUST00000015137.3|Limk1|ENSMUSG00000029674.7|LIM-domain containing, protein kinase
mm10_v2_chr2_+_150909565_150909642	0.390954	GCUGGUG	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr14_+_34819811_34819834	0.376577	GCUGGUG	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr5_-_120711927_120711927	0.372174	GCUGGUG	ENSMUST00000031607.6|Dtx1|ENSMUSG00000029603.9|deltex 1 homolog (Drosophila)
mm10_v2_chrX_-_142966709_142966734	0.361288	GCUGGUG	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr11_+_115381906_115381933	0.36037	GCUGGUG	ENSMUST00000053288.5|Cdr2l|ENSMUSG00000050910.5|cerebellar degeneration-related protein 2-like
mm10_v2_chr2_-_53191214_53191284	0.358888	GCUGGUG	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr3_+_88532314_88532396	0.341801	GCUGGUG	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chr2_+_5951440_5951469	0.331751	GCUGGUG	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr2_-_17731035_17731087	0.325607	GCUGGUG	ENSMUST00000028080.5|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr18_+_69345721_69345811	0.324284	GCUGGUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr8_-_84800024_84800283	0.324143	GCUGGUG	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr4_-_70410422_70410463	0.320642	GCUGGUG	ENSMUST00000144099.1|Cdk5rap2|ENSMUSG00000039298.10|CDK5 regulatory subunit associated protein 2
mm10_v2_chr1_+_136467958_136467958	0.319483	GCUGGUG	ENSMUST00000047817.6|Kif14|ENSMUSG00000041498.7|kinesin family member 14
mm10_v2_chr9_+_40269430_40269441	0.317258	GCUGGUG	ENSMUST00000171835.2|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr17_+_47630690_47630690	0.310127	GCUGGUG	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr5_+_148265265_148265305	0.306788	GCUGGUG	ENSMUST00000071878.5|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr13_+_44731265_44731276	0.306523	GCUGGUG	ENSMUST00000173246.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr9_+_47530173_47530373	0.304056	GCUGGUG	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr15_-_84987958_84988018	0.298821	GCUGGUG	ENSMUST00000165743.1|5031439G07Rik|ENSMUSG00000036046.8|RIKEN cDNA 5031439G07 gene 	ENSMUST00000047144.6|5031439G07Rik|ENSMUSG00000036046.8|RIKEN cDNA 5031439G07 gene
mm10_v2_chr14_-_98169542_98169595	0.296158	GCUGGUG	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chrX_+_73673150_73673242	0.286871	GCUGGUG	ENSMUST00000033752.7|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8 	ENSMUST00000114467.2|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm10_v2_chr10_-_81230773_81230833	0.280585	GCUGGUG	ENSMUST00000047408.4|Atcay|ENSMUSG00000034958.5|ataxia, cerebellar, Cayman type homolog (human)
mm10_v2_chr8_-_121652895_121652913	0.278701	GCUGGUG	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr19_-_12501996_12502152	0.27755	GCUGGUG	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr1_+_39367816_39367851	0.275209	GCUGGUG	ENSMUST00000179954.1|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31 	ENSMUST00000178079.1|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31 	ENSMUST00000086535.6|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31
mm10_v2_chr11_-_84525514_84525542	0.270857	GCUGGUG	ENSMUST00000018842.7|Lhx1|ENSMUSG00000018698.9|LIM homeobox protein 1
mm10_v2_chr15_+_100761741_100761797	0.266905	GCUGGUG	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr11_+_44617310_44617336	0.264548	GCUGGUG	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr11_-_69413675_69413675	0.261307	GCUGGUG	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr13_-_47106176_47106206	0.260171	GCUGGUG	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr17_+_27856443_27856511	0.256341	GCUGGUG	ENSMUST00000114849.1|Uhrf1bp1|ENSMUSG00000039512.11|UHRF1 (ICBP90) binding protein 1
mm10_v2_chr7_-_43489967_43490075	0.244482	GCUGGUG	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr12_-_108003594_108003613	0.242137	GCUGGUG	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr6_-_112696604_112696686	0.239356	GCUGGUG	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr3_+_51415986_51416044	0.237487	GCUGGUG	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr2_-_163918683_163918683	0.237452	GCUGGUG	ENSMUST00000044734.2|Rims4|ENSMUSG00000035226.5|regulating synaptic membrane exocytosis 4
mm10_v2_chr14_-_101609033_101609191	0.237284	GCUGGUG	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr6_+_21985903_21985972	0.235634	GCUGGUG	ENSMUST00000137437.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1 	ENSMUST00000115383.2|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr17_+_35861318_35861339	0.233318	GCUGGUG	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr7_+_97696634_97696725	0.227031	GCUGGUG	ENSMUST00000026506.4|Clns1a|ENSMUSG00000025439.4|chloride channel, nucleotide-sensitive, 1A
mm10_v2_chr16_+_42907563_42907684	0.226902	GCUGGUG	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr18_-_75697639_75697697	0.219457	GCUGGUG	ENSMUST00000165559.1|Ctif|ENSMUSG00000052928.8|CBP80/20-dependent translation initiation factor
mm10_v2_chr11_+_17051818_17051899	0.217902	GCUGGUG	ENSMUST00000058159.5|Cnrip1|ENSMUSG00000044629.5|cannabinoid receptor interacting protein 1
mm10_v2_chr2_-_130638094_130638113	0.213594	GCUGGUG	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr4_-_45084538_45084604	0.20976	GCUGGUG	ENSMUST00000052236.6|Fbxo10|ENSMUSG00000048232.6|F-box protein 10
mm10_v2_chr4_-_133887765_133887804	0.209321	GCUGGUG	ENSMUST00000003741.9|Rps6ka1|ENSMUSG00000003644.11|ribosomal protein S6 kinase polypeptide 1 	ENSMUST00000105894.4|Rps6ka1|ENSMUSG00000003644.11|ribosomal protein S6 kinase polypeptide 1
mm10_v2_chr6_-_90810118_90810160	0.208515	GCUGGUG	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr8_-_35495487_35495545	0.206766	GCUGGUG	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr15_-_36283105_36283150	0.206725	GCUGGUG	ENSMUST00000022890.8|Rnf19a|ENSMUSG00000022280.8|ring finger protein 19A
mm10_v2_chr15_-_79505241_79505241	0.206431	GCUGGUG	ENSMUST00000057801.6|Kcnj4|ENSMUSG00000044216.6|potassium inwardly-rectifying channel, subfamily J, member 4
mm10_v2_chr2_-_32353247_32353282	0.19923	GCUGGUG	ENSMUST00000078352.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113352.2|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113365.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr3_-_56183678_56183701	0.196649	GCUGGUG	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr4_-_6990774_6990823	0.192793	GCUGGUG	ENSMUST00000039987.3|Tox|ENSMUSG00000041272.5|thymocyte selection-associated high mobility group box
mm10_v2_chr15_-_83595111_83595162	0.186517	GCUGGUG	ENSMUST00000016901.3|Ttll12|ENSMUSG00000016757.4|tubulin tyrosine ligase-like family, member 12
mm10_v2_chr5_+_108461222_108461241	0.181684	GCUGGUG	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr14_+_119138415_119138415	0.179578	GCUGGUG	ENSMUST00000065904.3|Hs6st3|ENSMUSG00000053465.5|heparan sulfate 6-O-sulfotransferase 3
mm10_v2_chr3_+_65528404_65528431	0.174225	GCUGGUG	ENSMUST00000047906.3|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr8_+_11312805_11312887	0.174124	GCUGGUG	ENSMUST00000033899.7|Col4a2|ENSMUSG00000031503.7|collagen, type IV, alpha 2
mm10_v2_chr6_-_53068562_53068656	0.170294	GCUGGUG	ENSMUST00000074541.5|Jazf1|ENSMUSG00000063568.5|JAZF zinc finger 1
mm10_v2_chr18_-_10030017_10030146	0.167882	GCUGGUG	ENSMUST00000116669.1|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14 	ENSMUST00000092096.6|Usp14|ENSMUSG00000047879.10|ubiquitin specific peptidase 14
mm10_v2_chr12_-_79296266_79296310	0.161504	GCUGGUG	ENSMUST00000021547.6|Zfyve26|ENSMUSG00000066440.4|zinc finger, FYVE domain containing 26
mm10_v2_chr5_+_108065742_108065767	0.160901	GCUGGUG	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr9_-_50617428_50617467	0.159533	GCUGGUG	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr5_+_147430407_147430545	0.159241	GCUGGUG	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr10_-_62340514_62340549	0.158493	GCUGGUG	ENSMUST00000099691.4|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr14_-_19977249_19977253	0.157758	GCUGGUG	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chrX_-_103821940_103821992	0.152661	GCUGGUG	ENSMUST00000042664.5|Slc16a2|ENSMUSG00000033965.6|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm10_v2_chr9_-_72111827_72111895	0.152641	GCUGGUG	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr6_-_47594967_47595047	0.149721	GCUGGUG	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chr4_-_59783800_59783876	0.146419	GCUGGUG	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr11_+_93886157_93886219	0.145662	GCUGGUG	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr2_-_79456750_79456761	0.145098	GCUGGUG	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr15_-_68258787_68258880	0.143334	GCUGGUG	ENSMUST00000162173.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000160248.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000159430.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000162054.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing
mm10_v2_chr2_-_45113255_45113279	0.142562	GCUGGUG	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr9_+_113930934_113930987	0.142423	GCUGGUG	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr5_-_145140238_145140281	0.141861	GCUGGUG	ENSMUST00000031627.8|Pdap1|ENSMUSG00000029623.8|PDGFA associated protein 1
mm10_v2_chr4_-_126468580_126468653	0.14173	GCUGGUG	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr12_-_14152038_14152069	0.141118	GCUGGUG	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr13_+_31806627_31806650	0.140428	GCUGGUG	ENSMUST00000062292.2|Foxc1|ENSMUSG00000050295.2|forkhead box C1
mm10_v2_chr2_+_15055274_15055379	0.140208	GCUGGUG	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr11_-_116027961_116027978	0.139687	GCUGGUG	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr1_-_21079162_21079243	0.138714	GCUGGUG	ENSMUST00000037998.4|Tram2|ENSMUSG00000041779.4|translocating chain-associating membrane protein 2
mm10_v2_chr11_+_98937669_98937735	0.13854	GCUGGUG	ENSMUST00000107475.2|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha 	ENSMUST00000068133.3|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha
mm10_v2_chr9_+_14276301_14276347	0.138497	GCUGGUG	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr2_-_152398046_152398076	0.136722	GCUGGUG	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr4_-_34882919_34882964	0.134677	GCUGGUG	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr9_-_9239052_9239101	0.134535	GCUGGUG	ENSMUST00000093893.5|Arhgap42|ENSMUSG00000050730.10|Rho GTPase activating protein 42
mm10_v2_chr4_-_44167580_44167608	0.134141	GCUGGUG	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr14_+_17660956_17660963	0.133108	GCUGGUG	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr9_-_65827544_65827576	0.12927	GCUGGUG	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr1_-_190170671_190170744	0.125287	GCUGGUG	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr1_-_119837613_119837673	0.121027	GCUGGUG	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr3_-_51277470_51277514	0.120757	GCUGGUG	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr11_+_57518657_57518722	0.116034	GCUGGUG	ENSMUST00000108849.1|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3 	ENSMUST00000020830.7|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3
mm10_v2_chr18_+_67774876_67774915	0.11504	GCUGGUG	ENSMUST00000025421.7|Seh1l|ENSMUSG00000079614.3|SEH1-like (S. cerevisiae
mm10_v2_chr14_-_100149764_100149764	0.113826	GCUGGUG	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr10_-_26373956_26374088	0.113703	GCUGGUG	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr2_+_84734050_84734107	0.113234	GCUGGUG	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr8_-_94601720_94601739	0.110953	GCUGGUG	ENSMUST00000034226.6|Fam192a|ENSMUSG00000031774.7|family with sequence similarity 192, member A
mm10_v2_chr11_+_60417238_60417301	0.107287	GCUGGUG	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr15_+_81744848_81744848	0.105384	GCUGGUG	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr18_+_35965036_35965087	0.104666	GCUGGUG	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr5_+_14514918_14514951	0.10423	GCUGGUG	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr10_-_89686250_89686306	0.102742	GCUGGUG	ENSMUST00000092227.5|Scyl2|ENSMUSG00000069539.5|SCY1-like 2 (S. cerevisiae) 	ENSMUST00000174252.1|Scyl2|ENSMUSG00000069539.5|SCY1-like 2 (S. cerevisiae)
mm10_v2_chr12_-_109600328_109600348	0.1023	GCUGGUG	ENSMUST00000149046.2|Rtl1|ENSMUSG00000085925.2|retrotransposon-like 1
mm10_v2_chr3_+_88616133_88616151	0.100617	GCUGGUG	ENSMUST00000176500.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000177498.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr9_+_31030621_31030700	0.0996479	GCUGGUG	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr14_-_69732510_69732581	0.0983085	GCUGGUG	ENSMUST00000036381.8|Chmp7|ENSMUSG00000034190.8|charged multivesicular body protein 7
mm10_v2_chr4_+_59805829_59805914	0.095926	GCUGGUG	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr4_+_85205417_85205535	0.0955451	GCUGGUG	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr6_-_59426279_59426345	0.0949154	GCUGGUG	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr3_-_103791537_103791563	0.0930555	GCUGGUG	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr11_+_43682038_43682060	0.0925905	GCUGGUG	ENSMUST00000094294.4|Pwwp2a|ENSMUSG00000044950.7|PWWP domain containing 2A
mm10_v2_chr10_-_80433615_80433655	0.091277	GCUGGUG	ENSMUST00000105346.3|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000020377.6|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000105340.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000020379.6|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000105344.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000105342.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000105345.3|Tcf3|ENSMUSG00000020167.8|transcription factor 3 	ENSMUST00000105343.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3
mm10_v2_chr19_-_4943049_4943127	0.0912281	GCUGGUG	ENSMUST00000133254.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000120475.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000025834.7|Peli3|ENSMUSG00000024901.8|pellino 3
mm10_v2_chr14_-_69805524_69805552	0.0906179	GCUGGUG	ENSMUST00000022665.2|Rhobtb2|ENSMUSG00000022075.6|Rho-related BTB domain containing 2
mm10_v2_chr13_+_54949388_54949481	0.0898859	GCUGGUG	ENSMUST00000026994.7|Unc5a|ENSMUSG00000025876.9|unc-5 homolog A (C. elegans) 	ENSMUST00000109994.2|Unc5a|ENSMUSG00000025876.9|unc-5 homolog A (C. elegans)
mm10_v2_chr11_-_85235065_85235137	0.0896113	GCUGGUG	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr19_+_5689131_5689131	0.0892766	GCUGGUG	ENSMUST00000004156.8|Map3k11|ENSMUSG00000004054.8|mitogen-activated protein kinase kinase kinase 11
mm10_v2_chr4_+_155891822_155891892	0.0889043	GCUGGUG	ENSMUST00000105584.3|Acap3|ENSMUSG00000029033.10|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 	ENSMUST00000079031.5|Acap3|ENSMUSG00000029033.10|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
mm10_v2_chr5_+_134099704_134099760	0.0860365	GCUGGUG	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr2_-_30124454_30124470	0.0848273	GCUGGUG	ENSMUST00000044751.8|Zer1|ENSMUSG00000039686.8|zyg-11 related, cell cycle regulator
mm10_v2_chr17_-_47924635_47924652	0.0847009	GCUGGUG	ENSMUST00000113265.1|Foxp4|ENSMUSG00000023991.10|forkhead box P4
mm10_v2_chr6_-_86669136_86669164	0.0839675	GCUGGUG	ENSMUST00000001184.7|Mxd1|ENSMUSG00000001156.7|MAX dimerization protein 1
mm10_v2_chr3_-_50443603_50443615	0.0819907	GCUGGUG	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr1_+_64532790_64532815	0.0819397	GCUGGUG	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr13_-_69533839_69533839	0.0792966	GCUGGUG	ENSMUST00000044081.7|Papd7|ENSMUSG00000034575.7|PAP associated domain containing 7
mm10_v2_chr8_+_94857450_94857494	0.0791332	GCUGGUG	ENSMUST00000109521.3|Polr2c|ENSMUSG00000031783.9|polymerase (RNA) II (DNA directed) polypeptide C
mm10_v2_chr9_-_21091974_21092007	0.0773843	GCUGGUG	ENSMUST00000115487.1|Raver1|ENSMUSG00000010205.10|ribonucleoprotein, PTB-binding 1
mm10_v2_chr10_-_43174521_43174569	0.0770599	GCUGGUG	ENSMUST00000040275.7|Sobp|ENSMUSG00000038248.7|sine oculis-binding protein homolog (Drosophila)
mm10_v2_chr15_+_59374198_59374279	0.0752069	GCUGGUG	ENSMUST00000079703.3|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae) 	ENSMUST00000168722.1|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm10_v2_chr12_+_3426857_3426931	0.0745715	GCUGGUG	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr11_+_70562980_70563070	0.0708962	GCUGGUG	ENSMUST00000079244.5|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish) 	ENSMUST00000102558.4|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish)
mm10_v2_chr16_-_91931643_91931687	0.0691287	GCUGGUG	ENSMUST00000023677.3|Atp5o|ENSMUSG00000022956.4|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
mm10_v2_chr2_-_125123618_125123661	0.0664634	GCUGGUG	ENSMUST00000142718.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000152367.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000067780.3|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000147105.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor
mm10_v2_chr2_+_164074122_164074218	0.0640413	GCUGGUG	ENSMUST00000018353.7|Stk4|ENSMUSG00000018209.9|serine/threonine kinase 4
mm10_v2_chr11_+_102284931_102285033	0.0632718	GCUGGUG	ENSMUST00000036376.6|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2 	ENSMUST00000100387.4|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr2_+_181497165_181497216	0.0610442	GCUGGUG	ENSMUST00000149163.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000000844.8|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000184849.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000108800.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000069712.2|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2
mm10_v2_chr9_+_121898458_121898466	0.0584864	GCUGGUG	ENSMUST00000050327.3|Ackr2|ENSMUSG00000044534.7|atypical chemokine receptor 2
mm10_v2_chr15_-_73423180_73423218	0.0583587	GCUGGUG	ENSMUST00000110036.2|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2 	ENSMUST00000170939.1|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2
mm10_v2_chr1_+_136131382_136131404	0.0579754	GCUGGUG	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chr9_-_29963112_29963141	0.0574029	GCUGGUG	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr2_-_167631972_167632095	0.056781	GCUGGUG	ENSMUST00000060645.6|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000140216.1|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000151365.1|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000109207.3|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1
mm10_v2_chrX_+_152233228_152233272	0.0566752	GCUGGUG	ENSMUST00000112588.2|Kdm5c|ENSMUSG00000025332.8|lysine (K)-specific demethylase 5C 	ENSMUST00000082177.6|Kdm5c|ENSMUSG00000025332.8|lysine (K)-specific demethylase 5C
mm10_v2_chr4_-_41124292_41124455	0.0563848	GCUGGUG	ENSMUST00000030138.8|Nol6|ENSMUSG00000028430.8|nucleolar protein family 6 (RNA-associated)
mm10_v2_chr8_+_79028587_79028654	0.0560526	GCUGGUG	ENSMUST00000119254.1|Zfp827|ENSMUSG00000071064.7|zinc finger protein 827
mm10_v2_chr9_+_40686002_40686059	0.0559403	GCUGGUG	ENSMUST00000034522.7|Clmp|ENSMUSG00000032024.10|CXADR-like membrane protein
mm10_v2_chr5_-_25498702_25498745	0.0553489	GCUGGUG	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr4_+_123016590_123016613	0.0550605	GCUGGUG	ENSMUST00000102649.3|Trit1|ENSMUSG00000028653.10|tRNA isopentenyltransferase 1
mm10_v2_chrX_-_157598656_157598715	0.0540996	GCUGGUG	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr10_-_37138863_37138937	0.0525962	GCUGGUG	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr11_-_70687917_70687981	0.0495739	GCUGGUG	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr5_+_115429585_115429613	0.0480621	GCUGGUG	ENSMUST00000150779.1|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr14_+_26579535_26579612	0.0473949	GCUGGUG	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr11_-_116694802_116694882	0.046655	GCUGGUG	ENSMUST00000079545.5|St6galnac2|ENSMUSG00000057286.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
mm10_v2_chr5_-_51553896_51553921	0.0465889	GCUGGUG	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr13_-_55100248_55100321	0.046304	GCUGGUG	ENSMUST00000026997.5|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000127195.1|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000099496.3|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1
mm10_v2_chr12_-_46818749_46818788	0.0447278	GCUGGUG	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr2_+_74825802_74825858	0.0443864	GCUGGUG	ENSMUST00000028511.7|Mtx2|ENSMUSG00000027099.9|metaxin 2
mm10_v2_chr1_-_91931172_91931176	0.0423524	GCUGGUG	ENSMUST00000097644.2|Hdac4|ENSMUSG00000073617.2|histone deacetylase 4
mm10_v2_chr14_+_62555737_62555812	0.0409903	GCUGGUG	ENSMUST00000039064.7|Fam124a|ENSMUSG00000035184.9|family with sequence similarity 124, member A
mm10_v2_chr15_+_80711292_80711340	0.0404508	GCUGGUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr6_-_113195380_113195387	0.0397353	GCUGGUG	ENSMUST00000162280.1|Lhfpl4|ENSMUSG00000042873.10|lipoma HMGIC fusion partner-like protein 4
mm10_v2_chr9_-_97111117_97111159	0.0380159	GCUGGUG	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr17_-_42876417_42876431	0.037691	GCUGGUG	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr2_+_122028544_122028563	0.0373788	GCUGGUG	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr13_-_117025505_117025541	0.0372359	GCUGGUG	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr6_+_120364094_120364163	0.0360697	GCUGGUG	ENSMUST00000100996.3|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A 	ENSMUST00000005108.7|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A
mm10_v2_chr9_+_46282997_46283024	0.0340699	GCUGGUG	ENSMUST00000074957.3|Bud13|ENSMUSG00000032077.4|BUD13 homolog (yeast)
mm10_v2_chr16_+_58408443_58408523	0.0327754	GCUGGUG	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr6_-_71440623_71440645	0.0327169	GCUGGUG	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr8_-_95488774_95488852	0.0322761	GCUGGUG	ENSMUST00000056919.7|Csnk2a2|ENSMUSG00000046707.8|casein kinase 2, alpha prime polypeptide
mm10_v2_chr14_-_23803304_23803304	0.0317004	GCUGGUG	ENSMUST00000179836.1|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000172099.2|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000065788.8|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000179097.1|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000177634.1|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000074983.6|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000163322.2|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1 	ENSMUST00000100831.4|Kcnma1|ENSMUSG00000063142.7|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
mm10_v2_chr15_+_39198244_39198363	0.0314244	GCUGGUG	ENSMUST00000082054.5|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2 	ENSMUST00000042917.9|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2
mm10_v2_chr12_+_3807017_3807063	0.0287931	GCUGGUG	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr8_+_88199194_88199224	0.0273943	GCUGGUG	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr8_+_22859528_22859554	0.0265246	GCUGGUG	ENSMUST00000110696.1|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A 	ENSMUST00000044331.6|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A
mm10_v2_chr4_-_141139727_141139772	0.0251532	GCUGGUG	ENSMUST00000148204.1|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1 	ENSMUST00000102487.3|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1
mm10_v2_chr11_+_7063423_7063496	0.0238905	GCUGGUG	ENSMUST00000020706.4|Adcy1|ENSMUSG00000020431.5|adenylate cyclase 1
mm10_v2_chr19_-_5457397_5457494	0.0232327	GCUGGUG	ENSMUST00000179549.1|Ccdc85b|ENSMUSG00000095098.1|coiled-coil domain containing 85B
mm10_v2_chr12_+_86361112_86361131	0.0214018	GCUGGUG	ENSMUST00000116402.3|Esrrb|ENSMUSG00000021255.11|estrogen related receptor, beta
mm10_v2_chr5_-_120777628_120777664	0.0206032	GCUGGUG	ENSMUST00000044833.8|Oas3|ENSMUSG00000032661.8|2'-5' oligoadenylate synthetase 3
mm10_v2_chr8_-_69996326_69996379	0.0205022	GCUGGUG	ENSMUST00000177851.1|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A 	ENSMUST00000065169.4|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A
mm10_v2_chr3_-_133544390_133544412	0.019847	GCUGGUG	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr2_-_119477613_119477705	0.0191723	GCUGGUG	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr10_+_40349265_40349387	0.0188798	GCUGGUG	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr19_-_60581013_60581025	0.0174674	GCUGGUG	ENSMUST00000111460.3|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000081790.7|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000166712.1|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1
mm10_v2_chr16_+_18836573_18836583	0.0173593	GCUGGUG	ENSMUST00000055413.6|2510002D24Rik|ENSMUSG00000071632.4|RIKEN cDNA 2510002D24 gene
mm10_v2_chr2_-_161109017_161109027	0.0150003	GCUGGUG	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr17_-_47611449_47611544	0.0141787	GCUGGUG	ENSMUST00000024783.8|Bysl|ENSMUSG00000023988.8|bystin-like
mm10_v2_chr17_-_49564262_49564337	0.013666	GCUGGUG	ENSMUST00000057610.6|Daam2|ENSMUSG00000040260.7|dishevelled associated activator of morphogenesis 2
mm10_v2_chr3_-_104818224_104818242	0.0136142	GCUGGUG	ENSMUST00000002297.5|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10
mm10_v2_chr16_+_56075399_56075492	0.0130375	GCUGGUG	ENSMUST00000089362.2|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000089360.3|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000049128.6|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7
mm10_v2_chr16_-_97170707_97170759	0.0121333	GCUGGUG	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr1_-_30949756_30949770	0.0119723	GCUGGUG	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr16_-_62786742_62786797	0.0116801	GCUGGUG	ENSMUST00000152553.1|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3 	ENSMUST00000063089.5|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3
mm10_v2_chr7_-_118243564_118243641	0.0116735	GCUGGUG	ENSMUST00000179047.1|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) 	ENSMUST00000032891.8|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm10_v2_chr4_+_97777606_97777632	0.0116639	GCUGGUG	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr6_+_72414301_72414319	0.0108015	GCUGGUG	ENSMUST00000065906.7|Ggcx|ENSMUSG00000053460.7|gamma-glutamyl carboxylase
mm10_v2_chr7_+_97579868_97579901	0.00865215	GCUGGUG	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr2_-_84886692_84886710	0.00809902	GCUGGUG	ENSMUST00000054514.5|Rtn4rl2|ENSMUSG00000050896.6|reticulon 4 receptor-like 2 	ENSMUST00000151799.1|Rtn4rl2|ENSMUSG00000050896.6|reticulon 4 receptor-like 2
mm10_v2_chr19_+_10001669_10001703	0.00800305	GCUGGUG	ENSMUST00000121418.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr12_+_86241848_86241936	0.0079648	GCUGGUG	ENSMUST00000071106.4|Gpatch2l|ENSMUSG00000021254.8|G patch domain containing 2 like
mm10_v2_chr18_+_12972225_12972314	0.00670095	GCUGGUG	ENSMUST00000025290.5|Impact|ENSMUSG00000024423.5|imprinted and ancient
mm10_v2_chr18_-_73703739_73703806	0.00650837	GCUGGUG	ENSMUST00000025393.7|Smad4|ENSMUSG00000024515.7|SMAD family member 4
mm10_v2_chr18_-_67724560_67724599	0.00648558	GCUGGUG	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr5_+_135187251_135187269	0.00578402	GCUGGUG	ENSMUST00000002825.5|Baz1b|ENSMUSG00000002748.6|bromodomain adjacent to zinc finger domain, 1B
mm10_v2_chr4_-_82505749_82505802	0.00553093	GCUGGUG	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr2_-_167661496_167661591	0.00311016	GCUGGUG	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr1_+_105663855_105663866	0.00181337	GCUGGUG	ENSMUST00000086721.3|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene 	ENSMUST00000039173.6|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene
