mm10_v2_chr11_-_40755201_40755311	0.147291	GGAGUGU	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr3_+_103102604_103102711	0.0618378	GGAGUGU	ENSMUST00000173206.1|Dennd2c|ENSMUSG00000007379.9|DENN/MADD domain containing 2C
mm10_v2_chr13_-_100552442_100552498	0.0472574	GGAGUGU	ENSMUST00000159515.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000160859.1|Ocln|ENSMUSG00000021638.6|occludin 	ENSMUST00000069756.4|Ocln|ENSMUSG00000021638.6|occludin
mm10_v2_chr8_-_73353477_73353551	0.0380488	GGAGUGU	ENSMUST00000119826.1|Large|ENSMUSG00000004383.11|like-glycosyltransferase
mm10_v2_chr4_+_136286061_136286114	0.0361468	GGAGUGU	ENSMUST00000069195.4|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46 	ENSMUST00000130658.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr4_-_141623799_141623840	0.0355258	GGAGUGU	ENSMUST00000038661.7|Slc25a34|ENSMUSG00000040740.7|solute carrier family 25, member 34
mm10_v2_chr8_+_88647315_88647315	0.0337704	GGAGUGU	ENSMUST00000118370.1|Nod2|ENSMUSG00000055994.9|nucleotide-binding oligomerization domain containing 2 	ENSMUST00000054324.8|Nod2|ENSMUSG00000055994.9|nucleotide-binding oligomerization domain containing 2
mm10_v2_chr7_+_43463145_43463185	0.0316295	GGAGUGU	ENSMUST00000107977.1|Vsig10l|ENSMUSG00000070604.3|ZV-set and immunoglobulin domain containing 10 like
mm10_v2_chr1_-_21961581_21961581	0.0314519	GGAGUGU	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr17_+_42315947_42315947	0.0304561	GGAGUGU	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr16_+_10488175_10488204	0.0281646	GGAGUGU	ENSMUST00000023147.6|Ciita|ENSMUSG00000022504.9|class II transactivator
mm10_v2_chr7_-_17062384_17062427	0.0277605	GGAGUGU	ENSMUST00000153833.1|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit 	ENSMUST00000108492.2|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit
mm10_v2_chr17_-_17624458_17624496	0.0272122	GGAGUGU	ENSMUST00000041047.2|Lnpep|ENSMUSG00000023845.6|leucyl/cystinyl aminopeptidase
mm10_v2_chr10_+_116301374_116301428	0.0207741	GGAGUGU	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr13_+_16014457_16014475	0.0179541	GGAGUGU	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr4_+_100095791_100095867	0.0162873	GGAGUGU	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr17_+_44188564_44188594	0.0161271	GGAGUGU	ENSMUST00000024755.5|Clic5|ENSMUSG00000023959.8|chloride intracellular channel 5
mm10_v2_chr7_+_45434833_45434871	0.0146931	GGAGUGU	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chrX_+_99821021_99821021	0.0132446	GGAGUGU	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr8_+_111094630_111094641	0.0123675	GGAGUGU	ENSMUST00000135302.1|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit 	ENSMUST00000039333.3|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit
mm10_v2_chr16_+_44173239_44173270	0.0120535	GGAGUGU	ENSMUST00000119746.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr3_+_156561792_156561869	0.0118478	GGAGUGU	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr17_-_83846769_83846810	0.0112078	GGAGUGU	ENSMUST00000000687.7|Haao|ENSMUSG00000000673.8|3-hydroxyanthranilate 3,4-dioxygenase
mm10_v2_chr2_-_146511992_146512015	0.0111014	GGAGUGU	ENSMUST00000109986.2|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr1_+_55237177_55237255	0.0109645	GGAGUGU	ENSMUST00000061334.8|Mars2|ENSMUSG00000046994.8|methionine-tRNA synthetase 2 (mitochondrial)
mm10_v2_chrX_-_101734125_101734269	0.0108009	GGAGUGU	ENSMUST00000056614.6|Cxcr3|ENSMUSG00000050232.6|chemokine (C-X-C motif) receptor 3
mm10_v2_chr8_+_40307458_40307458	0.0106278	GGAGUGU	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr3_+_90341654_90341654	0.00887294	GGAGUGU	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr11_-_83429455_83429455	0.00885615	GGAGUGU	ENSMUST00000052521.2|Gas2l2|ENSMUSG00000020686.6|growth arrest-specific 2 like 2
mm10_v2_chr4_-_133672601_133672652	0.00871954	GGAGUGU	ENSMUST00000062118.4|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V 	ENSMUST00000067902.6|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V
mm10_v2_chr7_-_80803253_80803331	0.00855155	GGAGUGU	ENSMUST00000167377.1|Iqgap1|ENSMUSG00000030536.9|IQ motif containing GTPase activating protein 1
mm10_v2_chr1_-_177796451_177796514	0.00831125	GGAGUGU	ENSMUST00000016105.8|Adss|ENSMUSG00000015961.8|adenylosuccinate synthetase, non muscle
mm10_v2_chr11_-_87359011_87359081	0.00820022	GGAGUGU	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr6_+_52177498_52177498	0.00806206	GGAGUGU	ENSMUST00000070587.3|5730596B20Rik|ENSMUSG00000056468.3|RIKEN cDNA 5730596B20 gene
mm10_v2_chr17_-_56935388_56935504	0.00791522	GGAGUGU	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr10_-_42276744_42276763	0.00735924	GGAGUGU	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr15_+_76538934_76538961	0.00713116	GGAGUGU	ENSMUST00000023220.8|Slc52a2|ENSMUSG00000022560.8|solute carrier protein 52, member 2
mm10_v2_chr5_-_148399901_148399912	0.00705839	GGAGUGU	ENSMUST00000048116.8|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr5_+_71699918_71699949	0.00698213	GGAGUGU	ENSMUST00000031122.7|Gabrb1|ENSMUSG00000029212.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm10_v2_chr5_+_143464493_143464536	0.00670412	GGAGUGU	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chrX_-_101263986_101264002	0.00600008	GGAGUGU	ENSMUST00000101358.2|Gm614|ENSMUSG00000090141.1|predicted gene 614
mm10_v2_chr15_-_13173607_13173644	0.00520098	GGAGUGU	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chr6_-_92706145_92706234	0.00517842	GGAGUGU	ENSMUST00000032093.5|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr5_-_74068361_74068438	0.00517089	GGAGUGU	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr1_+_139422196_139422383	0.00508125	GGAGUGU	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr13_-_107022027_107022138	0.00506252	GGAGUGU	ENSMUST00000117539.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000122233.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000022204.9|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000159772.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A
mm10_v2_chr1_+_59912972_59913027	0.00494627	GGAGUGU	ENSMUST00000036540.5|Fam117b|ENSMUSG00000041040.6|family with sequence similarity 117, member B
mm10_v2_chr9_-_50659780_50659801	0.00450218	GGAGUGU	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr11_+_4186789_4186865	0.00443042	GGAGUGU	ENSMUST00000041042.6|Tbc1d10a|ENSMUSG00000034412.7|TBC1 domain family, member 10a 	ENSMUST00000180088.1|Tbc1d10a|ENSMUSG00000034412.7|TBC1 domain family, member 10a
mm10_v2_chr12_+_57230406_57230460	0.00437875	GGAGUGU	ENSMUST00000139049.1|Prps1l3|ENSMUSG00000079104.4|phosphoribosyl pyrophosphate synthetase 1-like 3 	ENSMUST00000145003.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human) 	ENSMUST00000123498.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human)
mm10_v2_chrX_+_166238901_166238914	0.00425003	GGAGUGU	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr3_-_106547726_106547802	0.00405344	GGAGUGU	ENSMUST00000039153.7|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000148269.1|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000068301.4|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1
mm10_v2_chr7_-_127208423_127208504	0.00403279	GGAGUGU	ENSMUST00000120705.1|Tbc1d10b|ENSMUSG00000042492.6|TBC1 domain family, member 10b
mm10_v2_chr4_+_123201503_123201529	0.00393453	GGAGUGU	ENSMUST00000068262.5|Nt5c1a|ENSMUSG00000054958.6|5'-nucleotidase, cytosolic IA
mm10_v2_chr4_+_129984833_129984876	0.0039314	GGAGUGU	ENSMUST00000120204.1|Bai2|ENSMUSG00000028782.8|brain-specific angiogenesis inhibitor 2
mm10_v2_chr2_-_120404058_120404092	0.00387665	GGAGUGU	ENSMUST00000090042.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000110729.1|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A 	ENSMUST00000090046.5|Tmem87a|ENSMUSG00000033808.10|transmembrane protein 87A
mm10_v2_chr19_+_10389068_10389090	0.00381815	GGAGUGU	ENSMUST00000169121.1|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000076968.3|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000073899.4|Syt7|ENSMUSG00000024743.8|synaptotagmin VII
mm10_v2_chr16_+_32914094_32914142	0.0037113	GGAGUGU	ENSMUST00000023491.6|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170899.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000171118.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170201.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000165616.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000135193.2|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3
mm10_v2_chr7_-_126799163_126799254	0.00352717	GGAGUGU	ENSMUST00000032934.5|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr6_+_14901344_14901364	0.00339929	GGAGUGU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr12_-_55821157_55821195	0.00318617	GGAGUGU	ENSMUST00000110687.1|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1 	ENSMUST00000085385.5|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1
mm10_v2_chr19_+_11516473_11516512	0.00313072	GGAGUGU	ENSMUST00000163078.1|Ms4a6b|ENSMUSG00000024677.7|membrane-spanning 4-domains, subfamily A, member 6B
mm10_v2_chr8_+_12757002_12757027	0.00289205	GGAGUGU	ENSMUST00000033818.3|Atp11a|ENSMUSG00000031441.9|ATPase, class VI, type 11A 	ENSMUST00000091237.5|Atp11a|ENSMUSG00000031441.9|ATPase, class VI, type 11A
mm10_v2_chrX_+_96096034_96096056	0.00261271	GGAGUGU	ENSMUST00000117399.1|Msn|ENSMUSG00000031207.10|moesin
mm10_v2_chr11_-_61930246_61930257	0.0024072	GGAGUGU	ENSMUST00000102650.3|Akap10|ENSMUSG00000047804.9|A kinase (PRKA) anchor protein 10
mm10_v2_chr11_-_97280626_97280650	0.00235825	GGAGUGU	ENSMUST00000001480.7|Npepps|ENSMUSG00000001441.7|aminopeptidase puromycin sensitive
mm10_v2_chr6_+_113307160_113307230	0.00235622	GGAGUGU	ENSMUST00000113122.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113119.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113121.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113117.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1
mm10_v2_chr12_-_111377705_111377719	0.00233607	GGAGUGU	ENSMUST00000041965.3|Cdc42bpb|ENSMUSG00000021279.4|CDC42 binding protein kinase beta
mm10_v2_chr8_+_4166556_4166739	0.00207277	GGAGUGU	ENSMUST00000177053.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176149.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176072.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176825.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like
mm10_v2_chr5_-_69592311_69592337	0.00202227	GGAGUGU	ENSMUST00000031117.6|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr6_-_85069449_85069523	0.00198915	GGAGUGU	ENSMUST00000160783.1|Exoc6b|ENSMUSG00000033769.10|exocyst complex component 6B 	ENSMUST00000160197.1|Exoc6b|ENSMUSG00000033769.10|exocyst complex component 6B
mm10_v2_chr10_+_59323296_59323374	0.00198763	GGAGUGU	ENSMUST00000009789.8|P4ha1|ENSMUSG00000019916.8|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide 	ENSMUST00000092512.4|P4ha1|ENSMUSG00000019916.8|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide 	ENSMUST00000105466.2|P4ha1|ENSMUSG00000019916.8|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm10_v2_chr2_-_131187282_131187282	0.00195193	GGAGUGU	ENSMUST00000028801.1|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr15_+_37233036_37233073	0.00174499	GGAGUGU	ENSMUST00000161405.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000022895.8|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000161532.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila)
mm10_v2_chr16_-_96082389_96082481	0.00170203	GGAGUGU	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr1_+_75546258_75546312	0.00144728	GGAGUGU	ENSMUST00000124341.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr9_+_54586450_54586512	0.00122537	GGAGUGU	ENSMUST00000167866.1|Idh3a|ENSMUSG00000032279.10|isocitrate dehydrogenase 3 (NAD+) alpha
mm10_v2_chr19_-_47536997_47537119	0.000464849	GGAGUGU	ENSMUST00000182808.1|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1 	ENSMUST00000049369.9|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1
mm10_v2_chr12_+_105784694_105784872	0.00034998	GGAGUGU	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr2_-_153529941_153529985	0.000219022	GGAGUGU	ENSMUST00000035346.7|8430427H17Rik|ENSMUSG00000061411.6|RIKEN cDNA 8430427H17 gene
mm10_v2_chr3_+_88142328_88142483	0.000175743	GGAGUGU	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
