mm10_v2_chr9_+_103112072_103112093	0.0599383	GGCAAGA	ENSMUST00000035155.6|Rab6b|ENSMUSG00000032549.6|RAB6B, member RAS oncogene family
mm10_v2_chr19_+_4510472_4510487	0.0459399	GGCAAGA	ENSMUST00000068004.6|Pcx|ENSMUSG00000024892.9|pyruvate carboxylase
mm10_v2_chr7_+_25306085_25306157	0.0363433	GGCAAGA	ENSMUST00000119703.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145 	ENSMUST00000108409.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145
mm10_v2_chr15_-_43869993_43870058	0.0316853	GGCAAGA	ENSMUST00000067469.4|Tmem74|ENSMUSG00000054409.4|transmembrane protein 74
mm10_v2_chr10_+_69212634_69212667	0.0313866	GGCAAGA	ENSMUST00000020101.5|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr4_+_120854786_120854843	0.0307816	GGCAAGA	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr7_+_25077205_25077335	0.0245462	GGCAAGA	ENSMUST00000179556.1|Zfp574|ENSMUSG00000045252.10|zinc finger protein 574 	ENSMUST00000053410.9|Zfp574|ENSMUSG00000045252.10|zinc finger protein 574
mm10_v2_chr6_-_118197732_118197744	0.0220256	GGCAAGA	ENSMUST00000032201.5|Ret|ENSMUSG00000030110.7|ret proto-oncogene 	ENSMUST00000088790.3|Ret|ENSMUSG00000030110.7|ret proto-oncogene
mm10_v2_chr1_-_166002591_166002609	0.02199	GGCAAGA	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr4_+_8691303_8691380	0.0210743	GGCAAGA	ENSMUST00000051558.3|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr8_+_82863351_82863397	0.0209549	GGCAAGA	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr2_+_102658640_102658669	0.0208892	GGCAAGA	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr13_+_37826225_37826315	0.0203385	GGCAAGA	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr16_+_24393350_24393428	0.0192872	GGCAAGA	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr4_-_126429501_126429556	0.0188347	GGCAAGA	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr19_-_58794436_58794461	0.0184071	GGCAAGA	ENSMUST00000028299.4|1700019N19Rik|ENSMUSG00000026931.4|RIKEN cDNA 1700019N19 gene
mm10_v2_chr7_-_15999495_15999495	0.0174642	GGCAAGA	ENSMUST00000094821.3|Gltscr1|ENSMUSG00000070808.3|glioma tumor suppressor candidate region gene 1
mm10_v2_chr15_+_30172570_30172600	0.0170452	GGCAAGA	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr6_+_91684061_91684132	0.0166336	GGCAAGA	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr7_-_116443439_116443462	0.0157284	GGCAAGA	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr14_-_65262391_65262490	0.0153628	GGCAAGA	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr12_+_24831583_24831658	0.0147836	GGCAAGA	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr10_+_94036001_94036121	0.0145756	GGCAAGA	ENSMUST00000020208.4|Fgd6|ENSMUSG00000020021.4|FYVE, RhoGEF and PH domain containing 6
mm10_v2_chrX_+_143099594_143099594	0.0144911	GGCAAGA	ENSMUST00000165829.1|Rgag1|ENSMUSG00000085584.2|retrotransposon gag domain containing 1
mm10_v2_chr9_-_75683992_75684046	0.0142451	GGCAAGA	ENSMUST00000034699.6|Scg3|ENSMUSG00000032181.6|secretogranin III
mm10_v2_chr7_-_134938264_134938430	0.0138985	GGCAAGA	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr4_-_20778527_20778593	0.0138196	GGCAAGA	ENSMUST00000119374.1|Nkain3|ENSMUSG00000055761.8|Na+/K+ transporting ATPase interacting 3
mm10_v2_chr16_+_21204755_21204787	0.0137868	GGCAAGA	ENSMUST00000006112.6|Ephb3|ENSMUSG00000005958.8|Eph receptor B3
mm10_v2_chr19_+_25236959_25236982	0.013721	GGCAAGA	ENSMUST00000049400.8|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr11_-_3722189_3722222	0.0134851	GGCAAGA	ENSMUST00000102950.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2 	ENSMUST00000101632.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr13_+_54371340_54371352	0.012613	GGCAAGA	ENSMUST00000026985.8|Cplx2|ENSMUSG00000025867.8|complexin 2
mm10_v2_chr9_+_57589442_57589482	0.0121445	GGCAAGA	ENSMUST00000053230.6|Ulk3|ENSMUSG00000032308.8|unc-51-like kinase 3
mm10_v2_chr9_-_89622986_89622986	0.0118675	GGCAAGA	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr19_+_44562841_44562879	0.0116457	GGCAAGA	ENSMUST00000040455.4|Hif1an|ENSMUSG00000036450.4|hypoxia-inducible factor 1, alpha subunit inhibitor
mm10_v2_chr5_-_122900267_122900377	0.0115164	GGCAAGA	ENSMUST00000031435.7|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr8_-_105979413_105979444	0.0113921	GGCAAGA	ENSMUST00000034371.7|Dpep3|ENSMUSG00000031898.8|dipeptidase 3
mm10_v2_chr4_-_132884509_132884523	0.0112435	GGCAAGA	ENSMUST00000030698.4|Stx12|ENSMUSG00000028879.4|syntaxin 12
mm10_v2_chr11_+_80300866_80300912	0.0111266	GGCAAGA	ENSMUST00000017836.7|Rhbdl3|ENSMUSG00000017692.8|rhomboid, veinlet-like 3 (Drosophila)
mm10_v2_chr19_+_27322539_27322592	0.0110793	GGCAAGA	ENSMUST00000056708.3|Kcnv2|ENSMUSG00000047298.3|potassium channel, subfamily V, member 2
mm10_v2_chr1_-_165934900_165935036	0.0108324	GGCAAGA	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr8_+_14095849_14095915	0.0103572	GGCAAGA	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr12_-_104751900_104751952	0.0103413	GGCAAGA	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr19_-_24477356_24477490	0.0101406	GGCAAGA	ENSMUST00000099556.1|Fam122a|ENSMUSG00000074922.1|family with sequence similarity 122, member A
mm10_v2_chr13_-_116309639_116309699	0.010091	GGCAAGA	ENSMUST00000036060.6|Isl1|ENSMUSG00000042258.7|ISL1 transcription factor, LIM/homeodomain
mm10_v2_chr13_-_55362782_55362804	0.00999843	GGCAAGA	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr5_-_115158169_115158180	0.00982656	GGCAAGA	ENSMUST00000053271.5|Mlec|ENSMUSG00000048578.7|malectin 	ENSMUST00000112121.1|Mlec|ENSMUSG00000048578.7|malectin
mm10_v2_chr17_-_85090204_85090275	0.00969133	GGCAAGA	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chr11_-_103638862_103638893	0.00964165	GGCAAGA	ENSMUST00000107014.1|Lyzl6|ENSMUSG00000020945.7|lysozyme-like 6 	ENSMUST00000021328.7|Lyzl6|ENSMUSG00000020945.7|lysozyme-like 6
mm10_v2_chr10_+_50895651_50895651	0.00923656	GGCAAGA	ENSMUST00000020071.3|Sim1|ENSMUSG00000019913.3|single-minded homolog 1 (Drosophila)
mm10_v2_chr18_+_38250240_38250287	0.00891443	GGCAAGA	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr11_+_75531690_75531743	0.00889174	GGCAAGA	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr12_-_85374696_85374719	0.00886162	GGCAAGA	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr1_-_165460430_165460487	0.00865873	GGCAAGA	ENSMUST00000027856.7|Dcaf6|ENSMUSG00000026571.7|DDB1 and CUL4 associated factor 6
mm10_v2_chr3_-_94786469_94786492	0.00865391	GGCAAGA	ENSMUST00000107273.1|Cgn|ENSMUSG00000068876.8|cingulin
mm10_v2_chr15_-_93275151_93275178	0.00860333	GGCAAGA	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr1_-_13372434_13372457	0.00834922	GGCAAGA	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr3_+_103575275_103575286	0.00823874	GGCAAGA	ENSMUST00000090697.4|Syt6|ENSMUSG00000027849.12|synaptotagmin VI
mm10_v2_chr2_+_65845767_65845799	0.00822775	GGCAAGA	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr4_-_134187019_134187112	0.00800572	GGCAAGA	ENSMUST00000040271.5|Cep85|ENSMUSG00000037443.7|centrosomal protein 85
mm10_v2_chr11_-_89418948_89418948	0.00790567	GGCAAGA	ENSMUST00000050983.1|4932411E22Rik|ENSMUSG00000047490.1|RIKEN cDNA 4932411E22 gene
mm10_v2_chr16_+_42907563_42907684	0.0078927	GGCAAGA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr6_-_120038647_120038699	0.00785533	GGCAAGA	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr11_-_86993682_86993707	0.00778944	GGCAAGA	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr1_+_194619815_194619833	0.00774976	GGCAAGA	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr4_+_106561027_106561038	0.00767157	GGCAAGA	ENSMUST00000047973.3|Dhcr24|ENSMUSG00000034926.3|24-dehydrocholesterol reductase
mm10_v2_chr1_-_56972437_56972502	0.00741388	GGCAAGA	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr17_+_72918298_72918316	0.00737077	GGCAAGA	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr6_-_83775767_83775826	0.00731412	GGCAAGA	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr9_-_75611308_75611334	0.00717352	GGCAAGA	ENSMUST00000064433.3|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr8_+_107150621_107150690	0.00715783	GGCAAGA	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr5_-_92083455_92083557	0.00644853	GGCAAGA	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr17_+_35823230_35823371	0.00643852	GGCAAGA	ENSMUST00000001569.8|Flot1|ENSMUSG00000059714.7|flotillin 1 	ENSMUST00000174080.1|Flot1|ENSMUSG00000059714.7|flotillin 1
mm10_v2_chr7_-_35754394_35754454	0.00618318	GGCAAGA	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr12_+_111538101_111538243	0.00617514	GGCAAGA	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr3_+_126596951_126596986	0.00611408	GGCAAGA	ENSMUST00000106402.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chr7_+_134670667_134670715	0.00610708	GGCAAGA	ENSMUST00000084488.4|Dock1|ENSMUSG00000058325.5|dedicator of cytokinesis 1
mm10_v2_chr3_+_28263205_28263215	0.00604987	GGCAAGA	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr2_+_118901428_118901488	0.00603582	GGCAAGA	ENSMUST00000036578.6|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chrX_-_164980310_164980375	0.00587164	GGCAAGA	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr1_+_60746358_60746427	0.0058545	GGCAAGA	ENSMUST00000027165.2|Cd28|ENSMUSG00000026012.2|CD28 antigen
mm10_v2_chr4_+_126103940_126104020	0.0058439	GGCAAGA	ENSMUST00000116286.2|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000094761.4|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000139524.1|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40
mm10_v2_chr16_+_13671922_13671937	0.0058063	GGCAAGA	ENSMUST00000035426.5|3110001I22Rik|ENSMUSG00000079737.3|RIKEN cDNA 3110001I22 gene
mm10_v2_chr19_-_6941428_6941518	0.00579938	GGCAAGA	ENSMUST00000025909.4|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137 	ENSMUST00000099774.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr10_-_117845935_117845949	0.00576268	GGCAAGA	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr5_-_76304474_76304548	0.00571892	GGCAAGA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr17_+_47630690_47630690	0.00569633	GGCAAGA	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr7_+_97332311_97332331	0.00569506	GGCAAGA	ENSMUST00000054107.5|Kctd21|ENSMUSG00000044952.5|potassium channel tetramerisation domain containing 21
mm10_v2_chr8_-_124949165_124949372	0.0056188	GGCAAGA	ENSMUST00000034469.5|Egln1|ENSMUSG00000031987.5|EGL nine homolog 1 (C. elegans)
mm10_v2_chr3_+_103914560_103914605	0.00560681	GGCAAGA	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr8_+_114205590_114205642	0.00552183	GGCAAGA	ENSMUST00000049509.6|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica) 	ENSMUST00000150963.1|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica)
mm10_v2_chr9_+_45138437_45138462	0.00548578	GGCAAGA	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chr16_-_4679703_4679777	0.00548145	GGCAAGA	ENSMUST00000038552.6|Coro7|ENSMUSG00000039637.8|coronin 7 	ENSMUST00000090480.4|Coro7|ENSMUSG00000039637.8|coronin 7
mm10_v2_chr12_+_55155104_55155104	0.00542992	GGCAAGA	ENSMUST00000110708.2|Srp54b|ENSMUSG00000079108.4|signal recognition particle 54B
mm10_v2_chr12_+_84996309_84996419	0.00521237	GGCAAGA	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr17_+_86167777_86167795	0.00481312	GGCAAGA	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr13_-_111808938_111809018	0.00473563	GGCAAGA	ENSMUST00000109267.2|Map3k1|ENSMUSG00000021754.11|mitogen-activated protein kinase kinase kinase 1
mm10_v2_chr2_-_64097994_64098023	0.00472121	GGCAAGA	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr1_+_162570687_162570837	0.00456406	GGCAAGA	ENSMUST00000050010.4|Vamp4|ENSMUSG00000026696.9|vesicle-associated membrane protein 4 	ENSMUST00000150040.1|Vamp4|ENSMUSG00000026696.9|vesicle-associated membrane protein 4
mm10_v2_chr2_-_33371400_33371484	0.00456139	GGCAAGA	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr6_+_39381175_39381175	0.00449152	GGCAAGA	ENSMUST00000031986.4|Rab19|ENSMUSG00000029923.4|RAB19, member RAS oncogene family
mm10_v2_chr2_+_173737492_173737511	0.00446665	GGCAAGA	ENSMUST00000067530.4|Vapb|ENSMUSG00000054455.4|vesicle-associated membrane protein, associated protein B and C
mm10_v2_chr2_+_14604252_14604306	0.00438534	GGCAAGA	ENSMUST00000114723.2|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit
mm10_v2_chr17_+_26138661_26138950	0.00431959	GGCAAGA	ENSMUST00000074370.3|Axin1|ENSMUSG00000024182.10|axin 1 	ENSMUST00000118904.2|Axin1|ENSMUSG00000024182.10|axin 1 	ENSMUST00000163421.1|Axin1|ENSMUSG00000024182.10|axin 1
mm10_v2_chr3_-_9610074_9610086	0.0042685	GGCAAGA	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr16_+_33251415_33251456	0.00405047	GGCAAGA	ENSMUST00000023502.4|Snx4|ENSMUSG00000022808.4|sorting nexin 4
mm10_v2_chr6_+_4903298_4903346	0.0040269	GGCAAGA	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr9_-_52679429_52679429	0.00397292	GGCAAGA	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr19_-_3575708_3575756	0.00387579	GGCAAGA	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr11_-_120633594_120633605	0.00379851	GGCAAGA	ENSMUST00000058162.7|Mafg|ENSMUSG00000051510.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm10_v2_chr16_+_5050012_5050122	0.00364659	GGCAAGA	ENSMUST00000052449.5|Ubn1|ENSMUSG00000039473.7|ubinuclein 1
mm10_v2_chr8_-_60983215_60983319	0.0036402	GGCAAGA	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr15_+_86214431_86214459	0.00354269	GGCAAGA	ENSMUST00000063414.8|Tbc1d22a|ENSMUSG00000051864.9|TBC1 domain family, member 22a
mm10_v2_chr8_-_25201349_25201459	0.00346549	GGCAAGA	ENSMUST00000084512.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1 	ENSMUST00000084030.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1
mm10_v2_chr19_+_40831248_40831292	0.00345274	GGCAAGA	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr18_+_64887690_64887762	0.00342222	GGCAAGA	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr12_+_110737949_110738024	0.00338362	GGCAAGA	ENSMUST00000095410.2|Wdr20a|ENSMUSG00000037957.9|WD repeat domain 20A
mm10_v2_chr13_-_85288999_85289058	0.00333116	GGCAAGA	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr2_-_39226343_39226451	0.00332685	GGCAAGA	ENSMUST00000028087.3|Ppp6c|ENSMUSG00000026753.3|protein phosphatase 6, catalytic subunit
mm10_v2_chr16_-_4789984_4789995	0.00332296	GGCAAGA	ENSMUST00000004173.5|Cdip1|ENSMUSG00000004071.6|cell death inducing Trp53 target 1
mm10_v2_chr6_+_149408973_149409038	0.00311128	GGCAAGA	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr12_+_55089202_55089202	0.00310374	GGCAAGA	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr3_+_58576636_58576717	0.00303029	GGCAAGA	ENSMUST00000107924.1|Selt|ENSMUSG00000075700.9|selenoprotein T
mm10_v2_chr5_+_64803513_64803530	0.00293091	GGCAAGA	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr5_-_149636331_149636376	0.00285124	GGCAAGA	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr1_-_151428440_151428474	0.0027278	GGCAAGA	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr10_-_25200110_25200178	0.00267883	GGCAAGA	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr7_-_100583072_100583124	0.0026782	GGCAAGA	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr11_+_100574904_100574982	0.00264768	GGCAAGA	ENSMUST00000103120.4|Cnp|ENSMUSG00000006782.10|2',3'-cyclic nucleotide 3' phosphodiesterase
mm10_v2_chr11_+_75732869_75732975	0.00258473	GGCAAGA	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr12_-_51971289_51971326	0.00256887	GGCAAGA	ENSMUST00000040583.5|Heatr5a|ENSMUSG00000035181.5|HEAT repeat containing 5A
mm10_v2_chr6_-_32588192_32588213	0.00256766	GGCAAGA	ENSMUST00000115096.2|Plxna4|ENSMUSG00000029765.10|plexin A4
mm10_v2_chr5_+_123394782_123394826	0.00256554	GGCAAGA	ENSMUST00000111596.1|Mlxip|ENSMUSG00000038342.9|MLX interacting protein 	ENSMUST00000068237.5|Mlxip|ENSMUSG00000038342.9|MLX interacting protein
mm10_v2_chr2_-_179976646_179976665	0.00242895	GGCAAGA	ENSMUST00000041618.7|Taf4a|ENSMUSG00000039117.10|TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr4_-_129335324_129335377	0.00242493	GGCAAGA	ENSMUST00000102598.3|Rbbp4|ENSMUSG00000057236.10|retinoblastoma binding protein 4
mm10_v2_chr14_-_79771305_79771318	0.00218055	GGCAAGA	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr12_-_85339346_85339391	0.00215993	GGCAAGA	ENSMUST00000040992.7|Nek9|ENSMUSG00000034290.9|NIMA (never in mitosis gene a)-related expressed kinase 9
mm10_v2_chr13_+_93308006_93308034	0.00215056	GGCAAGA	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr17_-_47688028_47688183	0.00210652	GGCAAGA	ENSMUST00000113301.1|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast) 	ENSMUST00000113302.3|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast)
mm10_v2_chr4_+_116720920_116721004	0.00204693	GGCAAGA	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr9_-_52168111_52168111	0.00200354	GGCAAGA	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr12_+_110485710_110485755	0.0019875	GGCAAGA	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr15_+_68928414_68928421	0.00185165	GGCAAGA	ENSMUST00000022954.6|Khdrbs3|ENSMUSG00000022332.7|KH domain containing, RNA binding, signal transduction associated 3
mm10_v2_chr9_+_111311674_111311758	0.00181072	GGCAAGA	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr10_+_128377086_128377155	0.00177841	GGCAAGA	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr11_-_12037391_12037407	0.00171273	GGCAAGA	ENSMUST00000093321.5|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr6_-_59426279_59426345	0.00163571	GGCAAGA	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chrX_+_151344171_151344197	0.00160483	GGCAAGA	ENSMUST00000073364.5|Fam120c|ENSMUSG00000025262.8|family with sequence similarity 120, member C
mm10_v2_chr1_-_16519284_16519336	0.00156522	GGCAAGA	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr17_-_79896028_79896123	0.00156385	GGCAAGA	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr15_-_98607611_98607638	0.00134426	GGCAAGA	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr2_-_35200923_35201120	0.00126988	GGCAAGA	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr4_-_133753611_133753666	0.00125078	GGCAAGA	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr12_+_80644212_80644265	0.00124333	GGCAAGA	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr6_+_38433913_38433965	0.00120167	GGCAAGA	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr4_-_141723401_141723436	0.00111261	GGCAAGA	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr19_+_6276725_6276792	0.00111028	GGCAAGA	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr9_+_52047150_52047163	0.00104868	GGCAAGA	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr7_+_97579868_97579901	0.000938972	GGCAAGA	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr6_+_8948608_8948619	0.000926063	GGCAAGA	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr19_-_41263931_41264008	0.000801977	GGCAAGA	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chrX_-_36645359_36645414	0.000631509	GGCAAGA	ENSMUST00000051906.6|Akap17b|ENSMUSG00000059708.6|A kinase (PRKA) anchor protein 17B
mm10_v2_chr18_-_46525940_46525999	0.000597594	GGCAAGA	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr13_-_99516537_99516602	0.000524311	GGCAAGA	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr19_+_55316313_55316367	0.000484846	GGCAAGA	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr5_-_67427794_67427813	0.000377103	GGCAAGA	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr15_+_44428073_44428174	0.000366284	GGCAAGA	ENSMUST00000060652.3|Eny2|ENSMUSG00000022338.6|enhancer of yellow 2 homolog (Drosophila)
mm10_v2_chr9_+_108986163_108986163	0.000356862	GGCAAGA	ENSMUST00000052724.3|Ucn2|ENSMUSG00000049699.3|urocortin 2
mm10_v2_chr11_-_106193511_106193584	0.000267245	GGCAAGA	ENSMUST00000007444.7|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000152008.1|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000103072.3|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha 	ENSMUST00000106867.1|Strada|ENSMUSG00000069631.8|STE20-related kinase adaptor alpha
mm10_v2_chr4_+_106911470_106911511	0.000250438	GGCAAGA	ENSMUST00000030367.8|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3 	ENSMUST00000149926.1|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3
mm10_v2_chr1_+_153899937_153899953	0.000243887	GGCAAGA	ENSMUST00000086199.5|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr16_-_46496955_46496986	0.000242414	GGCAAGA	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr1_-_169747634_169747649	0.000231846	GGCAAGA	ENSMUST00000027991.5|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4 	ENSMUST00000111357.1|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4
mm10_v2_chr12_+_111039334_111039400	0.000153067	GGCAAGA	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr2_-_156992021_156992119	0.000143686	GGCAAGA	ENSMUST00000109558.1|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000069600.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000072298.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3
mm10_v2_chr13_+_44731265_44731276	0.000132208	GGCAAGA	ENSMUST00000173246.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr12_-_98901478_98901492	9.29492e-05	GGCAAGA	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr4_-_133672601_133672652	5.82022e-05	GGCAAGA	ENSMUST00000062118.4|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V 	ENSMUST00000067902.6|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V
