mm10_v2_chr7_-_127890918_127890970	0.470662	GUAACAG	ENSMUST00000121394.1|Prss53|ENSMUSG00000044139.11|protease, serine, 53
mm10_v2_chr4_+_108879063_108879085	0.240813	GUAACAG	ENSMUST00000106650.2|Rab3b|ENSMUSG00000003411.4|RAB3B, member RAS oncogene family
mm10_v2_chr8_-_89044162_89044195	0.232331	GUAACAG	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr7_-_46099752_46099897	0.212094	GUAACAG	ENSMUST00000180081.1|Kcnj11|ENSMUSG00000096146.1|potassium inwardly rectifying channel, subfamily J, member 11
mm10_v2_chr9_+_103112072_103112093	0.187708	GUAACAG	ENSMUST00000035155.6|Rab6b|ENSMUSG00000032549.6|RAB6B, member RAS oncogene family
mm10_v2_chr1_-_9967932_9967932	0.174738	GUAACAG	ENSMUST00000185184.1|Tcf24|ENSMUSG00000099032.1|transcription factor 24
mm10_v2_chr2_-_164443177_164443194	0.174101	GUAACAG	ENSMUST00000017153.3|Sdc4|ENSMUSG00000017009.3|syndecan 4
mm10_v2_chr8_+_78509319_78509399	0.16373	GUAACAG	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr7_+_121392266_121392296	0.155939	GUAACAG	ENSMUST00000084628.3|Hs3st2|ENSMUSG00000046321.7|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm10_v2_chr12_+_59131286_59131469	0.151249	GUAACAG	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr5_+_63649335_63649451	0.148503	GUAACAG	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr5_+_137288273_137288292	0.132694	GUAACAG	ENSMUST00000024099.4|Ache|ENSMUSG00000023328.8|acetylcholinesterase 	ENSMUST00000085934.3|Ache|ENSMUSG00000023328.8|acetylcholinesterase
mm10_v2_chr7_+_19094594_19094633	0.129334	GUAACAG	ENSMUST00000049454.5|Six5|ENSMUSG00000040841.5|sine oculis-related homeobox 5
mm10_v2_chr19_+_38264761_38264831	0.128738	GUAACAG	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr5_+_102481374_102481391	0.119822	GUAACAG	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr12_+_71831064_71831178	0.11883	GUAACAG	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr2_+_155381808_155381884	0.108691	GUAACAG	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr13_+_96542727_96542775	0.106185	GUAACAG	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr2_-_172043466_172043466	0.100217	GUAACAG	ENSMUST00000087950.3|Cbln4|ENSMUSG00000067578.3|cerebellin 4 precursor protein
mm10_v2_chrX_+_101376359_101376378	0.0999133	GUAACAG	ENSMUST00000119080.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr12_+_52516077_52516077	0.0978418	GUAACAG	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr13_+_55593135_55593177	0.0962405	GUAACAG	ENSMUST00000109905.3|Tmed9|ENSMUSG00000058569.7|transmembrane emp24 protein transport domain containing 9
mm10_v2_chr4_+_33924632_33924651	0.0959461	GUAACAG	ENSMUST00000057188.6|Cnr1|ENSMUSG00000044288.6|cannabinoid receptor 1 (brain)
mm10_v2_chr7_-_99858872_99858906	0.092878	GUAACAG	ENSMUST00000036274.6|Spcs2|ENSMUSG00000035227.6|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm10_v2_chr1_+_167001417_167001431	0.0895523	GUAACAG	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr2_+_62664279_62664300	0.0887706	GUAACAG	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr4_-_109476666_109476727	0.0885035	GUAACAG	ENSMUST00000030284.3|Rnf11|ENSMUSG00000028557.4|ring finger protein 11
mm10_v2_chr18_-_16809233_16809324	0.08684	GUAACAG	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr9_+_72925622_72925671	0.0823047	GUAACAG	ENSMUST00000038489.5|Pygo1|ENSMUSG00000034910.5|pygopus 1
mm10_v2_chr3_-_141982224_141982264	0.0764338	GUAACAG	ENSMUST00000029948.8|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr1_+_191906743_191906767	0.0763151	GUAACAG	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr9_-_86571775_86571847	0.0759308	GUAACAG	ENSMUST00000070064.4|Pgm3|ENSMUSG00000056131.7|phosphoglucomutase 3 	ENSMUST00000072585.6|Pgm3|ENSMUSG00000056131.7|phosphoglucomutase 3
mm10_v2_chr19_+_55742242_55742468	0.0754514	GUAACAG	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr3_-_58525867_58525873	0.0740513	GUAACAG	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr5_+_124540695_124540786	0.0740448	GUAACAG	ENSMUST00000060226.4|Tmed2|ENSMUSG00000029390.7|transmembrane emp24 domain trafficking protein 2
mm10_v2_chr8_-_26119125_26119233	0.0740318	GUAACAG	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr1_+_132417409_132417464	0.0732241	GUAACAG	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr13_+_104287855_104287882	0.0711279	GUAACAG	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chr13_-_92131494_92131680	0.0709705	GUAACAG	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr1_+_184034381_184034437	0.0682665	GUAACAG	ENSMUST00000048655.7|Dusp10|ENSMUSG00000039384.8|dual specificity phosphatase 10
mm10_v2_chr1_+_78310295_78310375	0.0652532	GUAACAG	ENSMUST00000036172.8|Sgpp2|ENSMUSG00000032908.8|sphingosine-1-phosphate phosphotase 2
mm10_v2_chr5_-_122900267_122900377	0.0649025	GUAACAG	ENSMUST00000031435.7|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr9_-_101251810_101251839	0.0648603	GUAACAG	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr13_+_104178797_104178872	0.0638273	GUAACAG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr6_-_72899952_72899985	0.0635896	GUAACAG	ENSMUST00000068697.8|Kcmf1|ENSMUSG00000055239.8|potassium channel modulatory factor 1
mm10_v2_chr9_-_70657121_70657188	0.062635	GUAACAG	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr12_-_85374696_85374719	0.0625194	GUAACAG	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr11_-_96916448_96916531	0.0616505	GUAACAG	ENSMUST00000103152.4|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chr2_-_64097994_64098023	0.0616286	GUAACAG	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr11_-_29515017_29515040	0.0610412	GUAACAG	ENSMUST00000133103.1|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1 	ENSMUST00000039900.3|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1
mm10_v2_chr1_-_37541003_37541046	0.0609581	GUAACAG	ENSMUST00000151952.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr10_+_111164794_111164811	0.0603985	GUAACAG	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr10_-_117845935_117845949	0.0601147	GUAACAG	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr14_-_21989475_21989601	0.0596422	GUAACAG	ENSMUST00000043409.7|Zfp503|ENSMUSG00000039081.9|zinc finger protein 503
mm10_v2_chr7_-_24972685_24972728	0.0578953	GUAACAG	ENSMUST00000076961.7|Rabac1|ENSMUSG00000003380.10|Rab acceptor 1 (prenylated)
mm10_v2_chr1_+_5083105_5083173	0.0564478	GUAACAG	ENSMUST00000044369.7|Atp6v1h|ENSMUSG00000033793.7|ATPase, H+ transporting, lysosomal V1 subunit H
mm10_v2_chr12_-_15816762_15816881	0.0559894	GUAACAG	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr1_-_182019927_182019989	0.0543729	GUAACAG	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chr6_+_8259379_8259460	0.0535242	GUAACAG	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr6_-_85069449_85069523	0.0520358	GUAACAG	ENSMUST00000160783.1|Exoc6b|ENSMUSG00000033769.10|exocyst complex component 6B 	ENSMUST00000160197.1|Exoc6b|ENSMUSG00000033769.10|exocyst complex component 6B
mm10_v2_chr3_+_58415689_58415689	0.0511699	GUAACAG	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr14_+_34673888_34673930	0.0509018	GUAACAG	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr3_-_57847478_57847610	0.0504907	GUAACAG	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr19_+_57361009_57361113	0.0473805	GUAACAG	ENSMUST00000036407.4|Fam160b1|ENSMUSG00000033478.4|family with sequence similarity 160, member B1
mm10_v2_chr17_-_51832666_51832678	0.0449983	GUAACAG	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr7_-_109986445_109986480	0.0433384	GUAACAG	ENSMUST00000094097.5|Tmem41b|ENSMUSG00000047554.7|transmembrane protein 41B
mm10_v2_chr15_-_93595877_93595909	0.0428063	GUAACAG	ENSMUST00000048982.4|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr1_+_180330470_180330493	0.0418653	GUAACAG	ENSMUST00000070181.6|Itpkb|ENSMUSG00000038855.9|inositol 1,4,5-trisphosphate 3-kinase B
mm10_v2_chr10_+_85102627_85102719	0.0412212	GUAACAG	ENSMUST00000095383.4|AI597468|ENSMUSG00000060935.5|expressed sequence AI597468
mm10_v2_chr2_-_33371400_33371484	0.0402131	GUAACAG	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr15_-_59082026_59082090	0.0397213	GUAACAG	ENSMUST00000080371.6|Mtss1|ENSMUSG00000022353.9|metastasis suppressor 1
mm10_v2_chr13_+_48261427_48261427	0.0394302	GUAACAG	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr5_+_3803160_3803193	0.0393871	GUAACAG	ENSMUST00000171023.1|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing 	ENSMUST00000080085.4|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing
mm10_v2_chr7_-_134225088_134225104	0.0386312	GUAACAG	ENSMUST00000067680.4|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr12_-_57546121_57546141	0.0383003	GUAACAG	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr2_+_52072823_52072854	0.0377611	GUAACAG	ENSMUST00000112693.2|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast) 	ENSMUST00000069794.5|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast)
mm10_v2_chr7_+_67952817_67952859	0.0362446	GUAACAG	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr10_-_70599284_70599301	0.0350129	GUAACAG	ENSMUST00000046513.3|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr14_-_49066653_49066674	0.0338248	GUAACAG	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr1_+_180726019_180726106	0.0334762	GUAACAG	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr12_+_4917376_4917438	0.0334707	GUAACAG	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr12_+_24831583_24831658	0.0324956	GUAACAG	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr1_-_130715734_130715825	0.0322324	GUAACAG	ENSMUST00000066863.6|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENSMUST00000050406.4|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr4_-_134535268_134535314	0.0314766	GUAACAG	ENSMUST00000102550.3|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like
mm10_v2_chr12_+_71015966_71016063	0.0313644	GUAACAG	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr6_-_13677930_13677974	0.0305724	GUAACAG	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr15_-_86186136_86186185	0.0304824	GUAACAG	ENSMUST00000044332.9|Cerk|ENSMUSG00000035891.10|ceramide kinase
mm10_v2_chr14_+_123659971_123660209	0.029983	GUAACAG	ENSMUST00000049681.7|Itgbl1|ENSMUSG00000032925.10|integrin, beta-like 1
mm10_v2_chr10_-_95416850_95416861	0.029851	GUAACAG	ENSMUST00000020215.9|Socs2|ENSMUSG00000020027.12|suppressor of cytokine signaling 2
mm10_v2_chr6_+_113077354_113077382	0.0295717	GUAACAG	ENSMUST00000042889.5|Setd5|ENSMUSG00000034269.6|SET domain containing 5
mm10_v2_chr3_+_103914560_103914605	0.0295595	GUAACAG	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr18_-_36515798_36515812	0.0281756	GUAACAG	ENSMUST00000025363.5|Hbegf|ENSMUSG00000024486.5|heparin-binding EGF-like growth factor
mm10_v2_chr5_-_24842579_24842624	0.0281427	GUAACAG	ENSMUST00000030787.8|Rheb|ENSMUSG00000028945.8|Ras homolog enriched in brain
mm10_v2_chrX_+_82948861_82948915	0.0279452	GUAACAG	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chrX_-_48454152_48454193	0.0275945	GUAACAG	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr17_-_26021853_26021866	0.0275072	GUAACAG	ENSMUST00000118828.1|Rab11fip3|ENSMUSG00000037098.11|RAB11 family interacting protein 3 (class II)
mm10_v2_chr6_-_148212374_148212391	0.027343	GUAACAG	ENSMUST00000136008.1|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2 	ENSMUST00000032447.4|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2
mm10_v2_chr11_-_96075655_96075677	0.027046	GUAACAG	ENSMUST00000090541.5|Atp5g1|ENSMUSG00000006057.9|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm10_v2_chr17_+_74528279_74528295	0.026286	GUAACAG	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr2_+_96318014_96318216	0.0261984	GUAACAG	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr13_+_94875600_94875611	0.0260731	GUAACAG	ENSMUST00000022195.10|Otp|ENSMUSG00000021685.10|orthopedia homolog (Drosophila)
mm10_v2_chr2_+_158409842_158409862	0.0252825	GUAACAG	ENSMUST00000109486.2|Ralgapb|ENSMUSG00000027652.9|Ral GTPase activating protein, beta subunit (non-catalytic) 	ENSMUST00000046274.5|Ralgapb|ENSMUSG00000027652.9|Ral GTPase activating protein, beta subunit (non-catalytic)
mm10_v2_chr2_-_36104060_36104073	0.0242257	GUAACAG	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chrX_+_6779306_6779306	0.0241214	GUAACAG	ENSMUST00000067410.7|Dgkk|ENSMUSG00000062393.7|diacylglycerol kinase kappa
mm10_v2_chr15_-_50889691_50889714	0.0236147	GUAACAG	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr11_-_115535804_115535863	0.0235555	GUAACAG	ENSMUST00000117589.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast) 	ENSMUST00000121185.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm10_v2_chr4_-_45408646_45408768	0.0235062	GUAACAG	ENSMUST00000153904.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000132815.2|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000107796.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000116341.3|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51
mm10_v2_chr2_+_121955964_121956001	0.0231482	GUAACAG	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr16_+_41532999_41533069	0.0229859	GUAACAG	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr4_-_35845204_35845204	0.0223581	GUAACAG	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr9_+_44604844_44604921	0.0219684	GUAACAG	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr17_-_5440229_5440263	0.0217071	GUAACAG	ENSMUST00000005053.7|Tmem242|ENSMUSG00000004945.9|transmembrane protein 242
mm10_v2_chr14_+_12284198_12284239	0.0215799	GUAACAG	ENSMUST00000112669.3|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene 	ENSMUST00000163392.1|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene
mm10_v2_chr19_+_7494033_7494068	0.0213473	GUAACAG	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chrX_-_13846508_13846591	0.0210991	GUAACAG	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr2_-_39190687_39190746	0.0209955	GUAACAG	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr8_+_128359065_128359085	0.020966	GUAACAG	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr6_+_146888481_146888589	0.0207051	GUAACAG	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chr1_-_132067924_132067948	0.0206891	GUAACAG	ENSMUST00000046658.3|Mfsd4|ENSMUSG00000059149.11|major facilitator superfamily domain containing 4
mm10_v2_chr4_+_53440516_53440684	0.0206404	GUAACAG	ENSMUST00000107651.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107647.1|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr3_+_135438722_135438780	0.0204944	GUAACAG	ENSMUST00000166033.1|Ube2d3|ENSMUSG00000078578.3|ubiquitin-conjugating enzyme E2D 3
mm10_v2_chr5_+_103425181_103425197	0.0203182	GUAACAG	ENSMUST00000048957.9|Ptpn13|ENSMUSG00000034573.10|protein tyrosine phosphatase, non-receptor type 13
mm10_v2_chr17_-_10319324_10319380	0.0202001	GUAACAG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr8_+_107293463_107293483	0.0201199	GUAACAG	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chrX_-_38564519_38564555	0.0198259	GUAACAG	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr8_-_8660773_8660773	0.0195987	GUAACAG	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr3_-_108562349_108562466	0.0193823	GUAACAG	ENSMUST00000090546.5|Tmem167b|ENSMUSG00000068732.5|transmembrane protein 167B
mm10_v2_chr2_-_73892530_73892555	0.0190613	GUAACAG	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr16_-_32079270_32079368	0.0186559	GUAACAG	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr11_-_100822525_100822576	0.0185505	GUAACAG	ENSMUST00000107358.2|Stat5b|ENSMUSG00000020919.5|signal transducer and activator of transcription 5B
mm10_v2_chr11_-_106920681_106920735	0.0185331	GUAACAG	ENSMUST00000103067.3|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr7_-_111082997_111083037	0.0184896	GUAACAG	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr6_+_39573858_39573887	0.0174852	GUAACAG	ENSMUST00000140364.1|Adck2|ENSMUSG00000046947.6|aarF domain containing kinase 2
mm10_v2_chr9_-_91365756_91365774	0.0171883	GUAACAG	ENSMUST00000034927.6|Zic1|ENSMUSG00000032368.8|zinc finger protein of the cerebellum 1
mm10_v2_chr16_-_22265950_22266005	0.016472	GUAACAG	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr15_+_37233036_37233073	0.0161037	GUAACAG	ENSMUST00000161405.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000022895.8|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000161532.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila)
mm10_v2_chr16_+_32400506_32400506	0.0158817	GUAACAG	ENSMUST00000115149.2|Tm4sf19|ENSMUSG00000079625.2|transmembrane 4 L six family member 19
mm10_v2_chr9_-_66124872_66124886	0.015809	GUAACAG	ENSMUST00000034946.8|Snx1|ENSMUSG00000032382.8|sorting nexin 1
mm10_v2_chr5_-_21055880_21055961	0.0154382	GUAACAG	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr14_+_26638074_26638151	0.0149959	GUAACAG	ENSMUST00000022429.2|Arf4|ENSMUSG00000021877.5|ADP-ribosylation factor 4
mm10_v2_chr5_+_90891234_90891250	0.0149882	GUAACAG	ENSMUST00000031327.8|Cxcl1|ENSMUSG00000029380.10|chemokine (C-X-C motif) ligand 1
mm10_v2_chr3_-_130060850_130060907	0.0149468	GUAACAG	ENSMUST00000001079.8|Sec24b|ENSMUSG00000001052.9|Sec24 related gene family, member B (S. cerevisiae)
mm10_v2_chr18_+_82910863_82910885	0.0137575	GUAACAG	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr18_+_65430945_65430973	0.0136486	GUAACAG	ENSMUST00000049248.5|Malt1|ENSMUSG00000032688.7|mucosa associated lymphoid tissue lymphoma translocation gene 1
mm10_v2_chr2_+_30952955_30953016	0.0135093	GUAACAG	ENSMUST00000028199.5|Tor1b|ENSMUSG00000026848.8|torsin family 1, member B
mm10_v2_chr19_+_21272276_21272296	0.0133042	GUAACAG	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr5_+_135149657_135149739	0.0131303	GUAACAG	ENSMUST00000153183.1|Tbl2|ENSMUSG00000005374.7|transducin (beta)-like 2
mm10_v2_chr1_+_78657825_78657868	0.0125441	GUAACAG	ENSMUST00000035779.8|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3
mm10_v2_chr6_+_145211134_145211222	0.0124317	GUAACAG	ENSMUST00000111725.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111726.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000039729.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111723.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111724.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111721.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111719.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5
mm10_v2_chr8_-_121907678_121907694	0.0124257	GUAACAG	ENSMUST00000045557.9|Slc7a5|ENSMUSG00000040010.10|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm10_v2_chr11_-_101175440_101175444	0.0117693	GUAACAG	ENSMUST00000062759.3|Ccr10|ENSMUSG00000044052.3|chemokine (C-C motif) receptor 10
mm10_v2_chr18_-_77713978_77714010	0.0116534	GUAACAG	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr5_-_51553896_51553921	0.0107416	GUAACAG	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr12_-_21373550_21373593	0.0106824	GUAACAG	ENSMUST00000101551.3|Adam17|ENSMUSG00000052593.9|a disintegrin and metallopeptidase domain 17
mm10_v2_chr10_+_39732099_39732140	0.0105681	GUAACAG	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr1_+_93235836_93235842	0.0105257	GUAACAG	ENSMUST00000062202.7|Sned1|ENSMUSG00000047793.7|sushi, nidogen and EGF-like domains 1
mm10_v2_chr11_+_101552849_101552901	0.0102523	GUAACAG	ENSMUST00000107213.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000107208.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000107212.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000127421.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr8_-_45262012_45262057	0.010179	GUAACAG	ENSMUST00000034064.3|F11|ENSMUSG00000031645.3|coagulation factor XI
mm10_v2_chr14_-_20794009_20794098	0.00931158	GUAACAG	ENSMUST00000100837.3|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000080440.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000071816.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma
mm10_v2_chr13_-_98891036_98891063	0.00905908	GUAACAG	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr6_+_114397936_114398086	0.00883696	GUAACAG	ENSMUST00000088987.2|Hrh1|ENSMUSG00000053004.8|histamine receptor H1 	ENSMUST00000160212.1|Hrh1|ENSMUSG00000053004.8|histamine receptor H1
mm10_v2_chr5_-_5266038_5266292	0.0086186	GUAACAG	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr1_-_4496400_4496420	0.008104	GUAACAG	ENSMUST00000027035.3|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr17_+_75005523_75005568	0.00768206	GUAACAG	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr5_-_25498702_25498745	0.00745153	GUAACAG	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr15_-_96460838_96460856	0.00733703	GUAACAG	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr5_-_73256555_73256636	0.00682862	GUAACAG	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr5_-_144965793_144965877	0.00633807	GUAACAG	ENSMUST00000110677.1|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000085684.4|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000100461.2|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1
mm10_v2_chr5_-_108132541_108132570	0.00618396	GUAACAG	ENSMUST00000119437.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5 	ENSMUST00000118036.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5
mm10_v2_chr2_-_104410334_104410334	0.00601556	GUAACAG	ENSMUST00000089726.3|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene
mm10_v2_chr2_-_18392736_18392838	0.00589844	GUAACAG	ENSMUST00000091418.5|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1 	ENSMUST00000166495.1|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1
mm10_v2_chr14_+_121035538_121035575	0.00582002	GUAACAG	ENSMUST00000026635.7|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr11_-_82829024_82829043	0.00558886	GUAACAG	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr8_+_90828820_90828842	0.00542382	GUAACAG	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr14_+_65358661_65358691	0.00533608	GUAACAG	ENSMUST00000066994.6|Zfp395|ENSMUSG00000034522.9|zinc finger protein 395
mm10_v2_chr17_-_65613521_65613555	0.00436564	GUAACAG	ENSMUST00000024897.8|Vapa|ENSMUSG00000024091.8|vesicle-associated membrane protein, associated protein A
mm10_v2_chr2_-_179976646_179976665	0.00415289	GUAACAG	ENSMUST00000041618.7|Taf4a|ENSMUSG00000039117.10|TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr5_-_135349991_135350040	0.00411116	GUAACAG	ENSMUST00000044972.7|Fkbp6|ENSMUSG00000040013.8|FK506 binding protein 6
mm10_v2_chr11_-_88718223_88718294	0.0038349	GUAACAG	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr15_-_95528702_95528777	0.00340944	GUAACAG	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr8_+_85171322_85171322	0.00276862	GUAACAG	ENSMUST00000076896.5|Gm6531|ENSMUSG00000062687.5|predicted gene 6531
mm10_v2_chr13_+_84222286_84222356	0.0022633	GUAACAG	ENSMUST00000057495.8|Tmem161b|ENSMUSG00000035762.10|transmembrane protein 161B
mm10_v2_chr2_-_173276526_173276544	0.00188356	GUAACAG	ENSMUST00000036248.6|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr16_+_35022394_35022440	0.0015748	GUAACAG	ENSMUST00000061156.8|Ptplb|ENSMUSG00000035376.9|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm10_v2_chr2_+_32151074_32151262	0.00155406	GUAACAG	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr8_+_39005827_39005867	0.00150869	GUAACAG	ENSMUST00000167992.1|Tusc3|ENSMUSG00000039530.10|tumor suppressor candidate 3
mm10_v2_chr4_-_129335324_129335377	0.00123854	GUAACAG	ENSMUST00000102598.3|Rbbp4|ENSMUSG00000057236.10|retinoblastoma binding protein 4
mm10_v2_chr9_+_7184514_7184567	0.000901247	GUAACAG	ENSMUST00000034499.8|Dcun1d5|ENSMUSG00000032002.9|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm10_v2_chr12_+_3807017_3807063	0.000571361	GUAACAG	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr10_-_40302186_40302206	0.000438252	GUAACAG	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
