mm10_v2_chrX_+_159303266_159303281	0.464304	Hmbox1	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr4_+_11123950_11123980	0.331872	Hmbox1	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr4_+_100478806_100478872	0.254334	Hmbox1	ENSMUST00000133493.2|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000092730.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000106979.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative)
mm10_v2_chr17_+_69439326_69439326	0.244806	Hmbox1	ENSMUST00000169935.1|A330050F15Rik|ENSMUSG00000091636.1|RIKEN cDNA A330050F15 gene
mm10_v2_chr6_+_96115249_96115311	0.215833	Hmbox1	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr2_-_172043466_172043466	0.192257	Hmbox1	ENSMUST00000087950.3|Cbln4|ENSMUSG00000067578.3|cerebellin 4 precursor protein
mm10_v2_chr15_+_25773985_25774042	0.188332	Hmbox1	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr6_+_29853746_29853790	0.175913	Hmbox1	ENSMUST00000064872.6|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000152581.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000176265.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000154079.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr6_+_113638467_113638544	0.16057	Hmbox1	ENSMUST00000059286.7|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089023.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089022.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2
mm10_v2_chr3_-_95217741_95217765	0.160175	Hmbox1	ENSMUST00000107204.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr9_+_106514572_106514602	0.158659	Hmbox1	ENSMUST00000085113.3|Iqcf5|ENSMUSG00000066382.3|IQ motif containing F5
mm10_v2_chr11_-_94507337_94507355	0.157774	Hmbox1	ENSMUST00000040692.8|Mycbpap|ENSMUSG00000039110.8|MYCBP associated protein
mm10_v2_chr9_+_75410145_75410184	0.157559	Hmbox1	ENSMUST00000180533.1|4933433G15Rik|ENSMUSG00000097021.1|RIKEN cDNA 4933433G15 gene 	ENSMUST00000180574.1|4933433G15Rik|ENSMUSG00000097021.1|RIKEN cDNA 4933433G15 gene
mm10_v2_chr12_-_112802646_112802665	0.156589	Hmbox1	ENSMUST00000124526.1|Ahnak2|ENSMUSG00000072812.4|AHNAK nucleoprotein 2
mm10_v2_chr3_-_116711820_116711847	0.14886	Hmbox1	ENSMUST00000153108.1|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr18_-_6241470_6241482	0.143481	Hmbox1	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr19_-_28967794_28967852	0.137545	Hmbox1	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chrX_-_155623118_155623118	0.129335	Hmbox1	ENSMUST00000170236.1|Ptchd1|ENSMUSG00000041552.7|patched domain containing 1
mm10_v2_chr15_+_55112420_55112451	0.128562	Hmbox1	ENSMUST00000100660.4|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr14_-_93888732_93888732	0.117801	Hmbox1	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr6_-_113434757_113434770	0.117718	Hmbox1	ENSMUST00000113091.1|Cidec|ENSMUSG00000030278.5|cell death-inducing DFFA-like effector c
mm10_v2_chr5_+_90561102_90561209	0.115462	Hmbox1	ENSMUST00000094615.4|5830473C10Rik|ENSMUSG00000070690.4|RIKEN cDNA 5830473C10 gene
mm10_v2_chr10_+_112271123_112271123	0.115217	Hmbox1	ENSMUST00000092175.2|Kcnc2|ENSMUSG00000035681.6|potassium voltage gated channel, Shaw-related subfamily, member 2
mm10_v2_chr18_+_32938955_32939041	0.10547	Hmbox1	ENSMUST00000042868.4|Camk4|ENSMUSG00000038128.6|calcium/calmodulin-dependent protein kinase IV
mm10_v2_chr1_+_59256906_59256907	0.104677	Hmbox1	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr4_+_99030946_99030961	0.103369	Hmbox1	ENSMUST00000030280.6|Angptl3|ENSMUSG00000028553.6|angiopoietin-like 3
mm10_v2_chr4_+_20042046_20042107	0.103093	Hmbox1	ENSMUST00000098242.3|Ggh|ENSMUSG00000073987.4|gamma-glutamyl hydrolase
mm10_v2_chr16_+_35983424_35983582	0.101104	Hmbox1	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr3_+_118433797_118433966	0.100879	Hmbox1	ENSMUST00000180593.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181926.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181060.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181310.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr2_+_34874396_34874481	0.100834	Hmbox1	ENSMUST00000113068.2|Cutal|ENSMUSG00000026870.13|cutA divalent cation tolerance homolog-like 	ENSMUST00000047447.8|Cutal|ENSMUSG00000026870.13|cutA divalent cation tolerance homolog-like
mm10_v2_chr3_+_5214763_5214763	0.0988767	Hmbox1	ENSMUST00000177924.1|Gm10748|ENSMUSG00000094451.1|predicted gene 10748
mm10_v2_chr4_+_152338887_152338967	0.0987156	Hmbox1	ENSMUST00000005175.4|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr7_+_102774495_102774495	0.0971228	Hmbox1	ENSMUST00000098217.2|Olfr561|ENSMUSG00000073966.2|olfactory receptor 561
mm10_v2_chr9_-_78368167_78368177	0.0966217	Hmbox1	ENSMUST00000071991.5|Dppa5a|ENSMUSG00000060461.5|developmental pluripotency associated 5A
mm10_v2_chr6_-_97179100_97179159	0.095962	Hmbox1	ENSMUST00000095664.3|Tmf1|ENSMUSG00000030059.9|TATA element modulatory factor 1
mm10_v2_chr8_+_105427634_105427646	0.0946968	Hmbox1	ENSMUST00000067305.6|Lrrc36|ENSMUSG00000054320.8|leucine rich repeat containing 36
mm10_v2_chr1_-_131279544_131279606	0.0893936	Hmbox1	ENSMUST00000062108.3|Ikbke|ENSMUSG00000042349.7|inhibitor of kappaB kinase epsilon
mm10_v2_chr9_-_104102550_104102568	0.088361	Hmbox1	ENSMUST00000050139.4|Ackr4|ENSMUSG00000041748.5|atypical chemokine receptor 4
mm10_v2_chr6_+_30611029_30611051	0.0872663	Hmbox1	ENSMUST00000115138.1|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr13_-_74807913_74807989	0.0870633	Hmbox1	ENSMUST00000065629.4|Cast|ENSMUSG00000021585.8|calpastatin
mm10_v2_chr18_-_6241486_6241550	0.0869117	Hmbox1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr7_-_29726991_29727015	0.085996	Hmbox1	ENSMUST00000061193.3|Catsperg2|ENSMUSG00000049123.9|catsper channel auxiliary subunit gamma 2
mm10_v2_chr13_-_73678005_73678026	0.0858465	Hmbox1	ENSMUST00000022105.7|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109680.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109679.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18
mm10_v2_chr13_+_34924409_34924426	0.0847284	Hmbox1	ENSMUST00000160279.1|4933417A18Rik|ENSMUSG00000021415.7|RIKEN cDNA 4933417A18 gene
mm10_v2_chr7_+_98838845_98839010	0.08387	Hmbox1	ENSMUST00000167303.1|Wnt11|ENSMUSG00000015957.5|wingless-related MMTV integration site 11
mm10_v2_chr12_+_69963452_69963474	0.0833252	Hmbox1	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr4_+_150914562_150914601	0.0801935	Hmbox1	ENSMUST00000135169.1|Tnfrsf9|ENSMUSG00000028965.7|tumor necrosis factor receptor superfamily, member 9
mm10_v2_chr3_-_95217690_95217728	0.0789992	Hmbox1	ENSMUST00000107209.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr18_-_38866702_38866748	0.0785973	Hmbox1	ENSMUST00000115582.1|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr8_-_9977650_9977690	0.0757694	Hmbox1	ENSMUST00000170033.1|Lig4|ENSMUSG00000049717.8|ligase IV, DNA, ATP-dependent
mm10_v2_chr1_-_171649002_171649012	0.0752641	Hmbox1	ENSMUST00000111276.3|Slamf7|ENSMUSG00000038179.8|SLAM family member 7
mm10_v2_chr4_-_99654983_99655116	0.0750678	Hmbox1	ENSMUST00000136525.1|Gm12688|ENSMUSG00000086096.1|predicted gene 12688
mm10_v2_chr6_+_123123313_123123342	0.0740618	Hmbox1	ENSMUST00000041779.6|Clec4a2|ENSMUSG00000030148.9|C-type lectin domain family 4, member a2
mm10_v2_chr3_+_95588990_95589009	0.0735782	Hmbox1	ENSMUST00000177399.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr11_-_49114874_49114874	0.0727513	Hmbox1	ENSMUST00000109201.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr16_+_10545390_10545427	0.0722445	Hmbox1	ENSMUST00000115827.1|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A 	ENSMUST00000038145.6|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A 	ENSMUST00000150894.1|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A
mm10_v2_chr7_-_109723786_109723855	0.0716507	Hmbox1	ENSMUST00000106735.2|BC051019|ENSMUSG00000031022.8|cDNA sequence BC051019 	ENSMUST00000033334.4|BC051019|ENSMUSG00000031022.8|cDNA sequence BC051019
mm10_v2_chr2_+_34874486_34874518	0.0715524	Hmbox1	ENSMUST00000028228.3|Cutal|ENSMUSG00000026870.13|cutA divalent cation tolerance homolog-like
mm10_v2_chr3_+_95588960_95588988	0.0714908	Hmbox1	ENSMUST00000176674.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000177389.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000176755.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr4_+_152338619_152338709	0.0692711	Hmbox1	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr6_-_40585783_40585811	0.0681818	Hmbox1	ENSMUST00000177178.1|Clec5a|ENSMUSG00000029915.8|C-type lectin domain family 5, member a 	ENSMUST00000129948.2|Clec5a|ENSMUSG00000029915.8|C-type lectin domain family 5, member a 	ENSMUST00000101491.4|Clec5a|ENSMUSG00000029915.8|C-type lectin domain family 5, member a
mm10_v2_chr19_+_39287074_39287104	0.0658507	Hmbox1	ENSMUST00000003137.8|Cyp2c29|ENSMUSG00000003053.11|cytochrome P450, family 2, subfamily c, polypeptide 29
mm10_v2_chr6_+_30610984_30611026	0.0657099	Hmbox1	ENSMUST00000062758.4|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr1_-_16520106_16520133	0.063607	Hmbox1	ENSMUST00000162435.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr3_-_95217877_95217918	0.0626684	Hmbox1	ENSMUST00000136139.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr10_-_52194956_52194990	0.0624721	Hmbox1	ENSMUST00000117992.2|Ros1|ENSMUSG00000019893.5|Ros1 proto-oncogene
mm10_v2_chr11_+_23008337_23008391	0.0621829	Hmbox1	ENSMUST00000172602.1|Fam161a|ENSMUSG00000049811.9|family with sequence similarity 161, member A
mm10_v2_chr3_+_95588928_95588953	0.0595235	Hmbox1	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr10_-_52195244_52195288	0.0593343	Hmbox1	ENSMUST00000020045.3|Ros1|ENSMUSG00000019893.5|Ros1 proto-oncogene
mm10_v2_chr13_+_74406387_74406396	0.0570062	Hmbox1	ENSMUST00000090860.6|Gm10116|ENSMUSG00000062382.7|predicted pseudogene 10116
mm10_v2_chr12_-_64965496_64965538	0.052422	Hmbox1	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr1_-_160153571_160153585	0.051729	Hmbox1	ENSMUST00000039178.5|Tnn|ENSMUSG00000026725.11|tenascin N
mm10_v2_chr9_+_104566677_104566706	0.051395	Hmbox1	ENSMUST00000157006.1|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chrX_+_164419855_164419909	0.0512298	Hmbox1	ENSMUST00000112255.1|Piga|ENSMUSG00000031381.9|phosphatidylinositol glycan anchor biosynthesis, class A
mm10_v2_chrX_-_38252398_38252439	0.0510082	Hmbox1	ENSMUST00000089056.3|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000089054.4|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000066498.7|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A
mm10_v2_chr6_-_42597372_42597384	0.0492994	Hmbox1	ENSMUST00000069023.3|Fam115e|ENSMUSG00000018656.5|family with sequence similarity 115, member E
mm10_v2_chr1_+_88200601_88200631	0.0477685	Hmbox1	ENSMUST00000049289.8|Ugt1a2|ENSMUSG00000090171.1|UDP glucuronosyltransferase 1 family, polypeptide A2
mm10_v2_chr8_+_11556061_11556099	0.045284	Hmbox1	ENSMUST00000054399.4|Ing1|ENSMUSG00000045969.7|inhibitor of growth family, member 1
mm10_v2_chr2_-_12419387_12419399	0.0448027	Hmbox1	ENSMUST00000124515.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr4_+_116558056_116558090	0.0427097	Hmbox1	ENSMUST00000106475.1|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr5_-_136565432_136565530	0.042407	Hmbox1	ENSMUST00000176172.1|Cux1|ENSMUSG00000029705.11|cut-like homeobox 1
mm10_v2_chr6_+_123123423_123123484	0.0415273	Hmbox1	ENSMUST00000032248.7|Clec4a2|ENSMUSG00000030148.9|C-type lectin domain family 4, member a2
mm10_v2_chr10_+_53596936_53597004	0.0414683	Hmbox1	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr1_+_21240581_21240589	0.040787	Hmbox1	ENSMUST00000027067.8|Gsta3|ENSMUSG00000025934.9|glutathione S-transferase, alpha 3
mm10_v2_chr15_+_100422147_100422147	0.0407676	Hmbox1	ENSMUST00000132119.1|Gm5475|ENSMUSG00000087444.1|predicted gene 5475
mm10_v2_chr1_-_16520067_16520095	0.0399487	Hmbox1	ENSMUST00000131257.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000153966.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr15_+_99393574_99393599	0.039022	Hmbox1	ENSMUST00000162624.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr4_-_121324912_121324928	0.0389526	Hmbox1	ENSMUST00000097905.2|Gm12888|ENSMUSG00000073764.2|predicted gene 12888
mm10_v2_chr18_+_65698253_65698277	0.0389505	Hmbox1	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr6_-_101377342_101377388	0.0384526	Hmbox1	ENSMUST00000151175.1|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr7_-_104390586_104390586	0.0384449	Hmbox1	ENSMUST00000106828.1|Trim30c|ENSMUSG00000078616.1|tripartite motif-containing 30C
mm10_v2_chr16_-_48771956_48772030	0.0378769	Hmbox1	ENSMUST00000170861.1|Trat1|ENSMUSG00000030775.9|T cell receptor associated transmembrane adaptor 1
mm10_v2_chr7_+_41032719_41032719	0.0360288	Hmbox1	ENSMUST00000164422.1|Gm4884|ENSMUSG00000048312.7|predicted gene 4884
mm10_v2_chr1_+_15805639_15805675	0.0357375	Hmbox1	ENSMUST00000027057.6|Terf1|ENSMUSG00000025925.8|telomeric repeat binding factor 1
mm10_v2_chr3_+_145118564_145118622	0.0345119	Hmbox1	ENSMUST00000098538.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000106192.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000029920.8|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000098539.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like
mm10_v2_chr1_-_173227229_173227229	0.0340512	Hmbox1	ENSMUST00000049706.5|Fcer1a|ENSMUSG00000005339.5|Fc receptor, IgE, high affinity I, alpha polypeptide
mm10_v2_chr11_-_78422217_78422240	0.03374	Hmbox1	ENSMUST00000001122.5|Slc13a2|ENSMUSG00000001095.5|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
mm10_v2_chr1_+_156040884_156040898	0.0337334	Hmbox1	ENSMUST00000060404.4|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2
mm10_v2_chr7_-_7399627_7399627	0.0331432	Hmbox1	ENSMUST00000075108.6|Vmn2r31|ENSMUSG00000096373.1|vomeronasal 2, receptor 31
mm10_v2_chr2_+_86007778_86007778	0.032857	Hmbox1	ENSMUST00000062166.1|Olfr1032|ENSMUSG00000042796.1|olfactory receptor 1032
mm10_v2_chr11_+_93996082_93996103	0.0328198	Hmbox1	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr12_+_17266545_17266601	0.0318323	Hmbox1	ENSMUST00000057288.5|Pdia6|ENSMUSG00000020571.6|protein disulfide isomerase associated 6
mm10_v2_chrX_+_135993820_135993820	0.031344	Hmbox1	ENSMUST00000058119.7|Arxes2|ENSMUSG00000048040.7|adipocyte-related X-chromosome expressed sequence 2
mm10_v2_chrX_+_157699113_157699134	0.0308942	Hmbox1	ENSMUST00000112521.1|Smpx|ENSMUSG00000041476.6|small muscle protein, X-linked
mm10_v2_chr3_-_69004475_69004499	0.0300398	Hmbox1	ENSMUST00000154741.1|Ift80|ENSMUSG00000027778.9|intraflagellar transport 80 	ENSMUST00000148031.1|Ift80|ENSMUSG00000027778.9|intraflagellar transport 80
mm10_v2_chr12_+_64965742_64965775	0.029782	Hmbox1	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr3_+_95217417_95217484	0.0293674	Hmbox1	ENSMUST00000181819.1|Gm16740|ENSMUSG00000097167.1|predicted gene, 16740
mm10_v2_chrX_-_140062293_140062340	0.029319	Hmbox1	ENSMUST00000154385.1|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like
mm10_v2_chr19_+_8757139_8757155	0.0292967	Hmbox1	ENSMUST00000183939.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr12_-_81532840_81532925	0.0287416	Hmbox1	ENSMUST00000169158.1|Synj2bp|ENSMUSG00000090935.4|synaptojanin 2 binding protein 	ENSMUST00000166664.1|Gm20498|ENSMUSG00000021139.11|predicted gene 20498 	ENSMUST00000164431.1|Synj2bp|ENSMUSG00000090935.4|synaptojanin 2 binding protein 	ENSMUST00000164386.1|Gm20498|ENSMUSG00000021139.11|predicted gene 20498 	ENSMUST00000163402.1|Synj2bp|ENSMUSG00000090935.4|synaptojanin 2 binding protein
mm10_v2_chr1_+_21240597_21240628	0.0287329	Hmbox1	ENSMUST00000121676.1|Gsta3|ENSMUSG00000025934.9|glutathione S-transferase, alpha 3
mm10_v2_chr13_-_101692624_101692647	0.0259123	Hmbox1	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr13_-_21531084_21531120	0.0254894	Hmbox1	ENSMUST00000045228.5|Zkscan8|ENSMUSG00000063894.8|zinc finger with KRAB and SCAN domains 8
mm10_v2_chr13_-_34077992_34078015	0.0252268	Hmbox1	ENSMUST00000056427.8|Tubb2a|ENSMUSG00000058672.6|tubulin, beta 2A class IIA
mm10_v2_chr15_+_99393610_99393637	0.0251115	Hmbox1	ENSMUST00000159531.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr16_+_10545339_10545388	0.0246103	Hmbox1	ENSMUST00000066345.7|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A 	ENSMUST00000115824.3|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A 	ENSMUST00000155633.1|Clec16a|ENSMUSG00000068663.7|C-type lectin domain family 16, member A
mm10_v2_chr11_+_51763682_51763749	0.0242838	Hmbox1	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr3_+_51661167_51661189	0.0230888	Hmbox1	ENSMUST00000099106.3|Mgst2|ENSMUSG00000074604.3|microsomal glutathione S-transferase 2
mm10_v2_chr4_-_133339283_133339334	0.0226487	Hmbox1	ENSMUST00000043305.7|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr3_-_69004565_69004585	0.0220507	Hmbox1	ENSMUST00000169064.1|Ift80|ENSMUSG00000027778.9|intraflagellar transport 80
mm10_v2_chr11_-_64436653_64436653	0.0216679	Hmbox1	ENSMUST00000177999.1|F930015N05Rik|ENSMUSG00000095224.1|RIKEN cDNA F930015N05 gene
mm10_v2_chr17_+_40934676_40934751	0.0215716	Hmbox1	ENSMUST00000169611.2|Mut|ENSMUSG00000023921.8|methylmalonyl-Coenzyme A mutase
mm10_v2_chr7_+_140881898_140881968	0.0210244	Hmbox1	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr3_-_79842662_79842662	0.0207026	Hmbox1	ENSMUST00000029568.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr4_-_133339238_133339271	0.0206643	Hmbox1	ENSMUST00000105906.1|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr3_-_123690806_123690847	0.0204906	Hmbox1	ENSMUST00000154668.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chrX_-_12160355_12160479	0.0196777	Hmbox1	ENSMUST00000043441.6|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr11_+_75650501_75650544	0.019554	Hmbox1	ENSMUST00000102505.3|Myo1c|ENSMUSG00000017774.13|myosin IC
mm10_v2_chr1_+_88227005_88227064	0.0189454	Hmbox1	ENSMUST00000061013.6|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A 	ENSMUST00000113130.1|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A
mm10_v2_chr9_-_71168657_71168683	0.0186637	Hmbox1	ENSMUST00000113570.1|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr10_-_128525859_128525880	0.0180233	Hmbox1	ENSMUST00000026427.6|Esyt1|ENSMUSG00000025366.7|extended synaptotagmin-like protein 1
mm10_v2_chr8_+_9977707_9977725	0.0178887	Hmbox1	ENSMUST00000139793.1|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13 	ENSMUST00000048216.5|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13
mm10_v2_chr6_-_24168083_24168097	0.017311	Hmbox1	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr2_-_128687354_128687396	0.0171997	Hmbox1	ENSMUST00000110332.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000110333.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000014499.3|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1
mm10_v2_chr3_-_108889990_108890031	0.017082	Hmbox1	ENSMUST00000053065.4|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7 	ENSMUST00000102620.3|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr14_+_66635251_66635349	0.0169552	Hmbox1	ENSMUST00000159365.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000054661.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000159068.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a
mm10_v2_chr10_-_7663569_7663613	0.0162056	Hmbox1	ENSMUST00000162606.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr12_-_69892989_69893103	0.0156262	Hmbox1	ENSMUST00000110567.1|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5 	ENSMUST00000171211.1|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5
mm10_v2_chr3_-_69004503_69004545	0.0153807	Hmbox1	ENSMUST00000107812.1|Ift80|ENSMUSG00000027778.9|intraflagellar transport 80
mm10_v2_chr17_+_56079652_56079667	0.0147733	Hmbox1	ENSMUST00000002911.8|Hdgfrp2|ENSMUSG00000002833.10|hepatoma-derived growth factor, related protein 2
mm10_v2_chr10_-_128804353_128804374	0.013425	Hmbox1	ENSMUST00000051011.7|Tmem198b|ENSMUSG00000047090.7|transmembrane protein 198b
mm10_v2_chr10_-_11080956_11081023	0.012504	Hmbox1	ENSMUST00000105560.1|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1
mm10_v2_chr7_-_45061651_45061691	0.0114513	Hmbox1	ENSMUST00000007981.3|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 	ENSMUST00000107831.1|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm10_v2_chr12_-_69893162_69893200	0.0112108	Hmbox1	ENSMUST00000049239.7|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5 	ENSMUST00000110570.1|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5
mm10_v2_chr19_+_8757099_8757126	0.0110995	Hmbox1	ENSMUST00000184970.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr7_-_29213957_29214033	0.0108188	Hmbox1	ENSMUST00000169143.1|Catsperg1|ENSMUSG00000049676.8|catsper channel auxiliary subunit gamma 1 	ENSMUST00000047846.6|Catsperg1|ENSMUSG00000049676.8|catsper channel auxiliary subunit gamma 1
mm10_v2_chr3_+_5218589_5218614	0.0106321	Hmbox1	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr2_+_175010241_175010319	0.0105809	Hmbox1	ENSMUST00000109069.1|Gm14444|ENSMUSG00000078906.3|predicted gene 14444 	ENSMUST00000109070.2|Gm14444|ENSMUSG00000078906.3|predicted gene 14444
mm10_v2_chr15_+_55112317_55112346	0.00943866	Hmbox1	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr1_-_152386589_152386610	0.00888827	Hmbox1	ENSMUST00000162371.1|Tsen15|ENSMUSG00000014980.8|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm10_v2_chr8_-_54724317_54724388	0.00868118	Hmbox1	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr16_-_21995478_21995542	0.00826042	Hmbox1	ENSMUST00000074230.4|Liph|ENSMUSG00000044626.6|lipase, member H 	ENSMUST00000060673.6|Liph|ENSMUSG00000044626.6|lipase, member H
mm10_v2_chr2_-_157571270_157571289	0.00819898	Hmbox1	ENSMUST00000173378.1|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr1_-_191907527_191907527	0.00813329	Hmbox1	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr14_-_55671873_55671918	0.0078033	Hmbox1	ENSMUST00000163750.1|Nedd8|ENSMUSG00000010376.8|neural precursor cell expressed, developmentally down-regulated gene 8 	ENSMUST00000010520.8|Nedd8|ENSMUSG00000010376.8|neural precursor cell expressed, developmentally down-regulated gene 8
mm10_v2_chr13_-_23574196_23574229	0.00772549	Hmbox1	ENSMUST00000105106.1|Hist1h2bf|ENSMUSG00000069268.4|histone cluster 1, H2bf
mm10_v2_chr1_-_170589791_170589861	0.00733871	Hmbox1	ENSMUST00000161966.1|Nos1ap|ENSMUSG00000038473.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENSMUST00000160456.1|Nos1ap|ENSMUSG00000038473.8|nitric oxide synthase 1 (neuronal) adaptor protein
mm10_v2_chr8_+_45507768_45507818	0.0063672	Hmbox1	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr11_+_101468164_101468175	0.00599849	Hmbox1	ENSMUST00000001347.6|Rnd2|ENSMUSG00000001313.6|Rho family GTPase 2
mm10_v2_chr1_-_163289214_163289235	0.00552998	Hmbox1	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr8_-_105347885_105347953	0.00517363	Hmbox1	ENSMUST00000014922.4|Fhod1|ENSMUSG00000014778.4|formin homology 2 domain containing 1
mm10_v2_chr1_-_16520020_16520039	0.00479358	Hmbox1	ENSMUST00000144138.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000145092.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr9_+_75311395_75311395	0.00382775	Hmbox1	ENSMUST00000076889.6|Gnb5|ENSMUSG00000032192.8|guanine nucleotide binding protein (G protein), beta 5
mm10_v2_chr10_-_81600857_81600900	0.00374326	Hmbox1	ENSMUST00000151858.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000142948.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000072020.2|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl)
mm10_v2_chr1_-_75278345_75278440	0.00348638	Hmbox1	ENSMUST00000039534.4|Resp18|ENSMUSG00000033061.9|regulated endocrine-specific protein 18
mm10_v2_chrX_-_7375830_7375830	0.00300131	Hmbox1	ENSMUST00000115744.1|Usp27x|ENSMUSG00000046269.10|ubiquitin specific peptidase 27, X chromosome
mm10_v2_chr3_+_108653931_108653964	0.00298629	Hmbox1	ENSMUST00000029483.8|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1 	ENSMUST00000124384.1|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1
mm10_v2_chr11_+_31872100_31872226	0.00263752	Hmbox1	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr13_+_49504774_49504816	0.00215593	Hmbox1	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr7_-_25816616_25816653	0.00186867	Hmbox1	ENSMUST00000043314.3|Cyp2s1|ENSMUSG00000040703.5|cytochrome P450, family 2, subfamily s, polypeptide 1
mm10_v2_chr3_-_108889706_108889808	0.00178307	Hmbox1	ENSMUST00000180063.1|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr12_+_36314160_36314171	0.00150783	Hmbox1	ENSMUST00000041407.5|Sostdc1|ENSMUSG00000036169.5|sclerostin domain containing 1
mm10_v2_chr18_-_3281036_3281132	0.00104868	Hmbox1	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr11_+_73177083_73177235	0.000647069	Hmbox1	ENSMUST00000040687.5|Tax1bp3|ENSMUSG00000040158.6|Tax1 (human T cell leukemia virus type I) binding protein 3
mm10_v2_chr3_-_105052948_105052987	0.000389624	Hmbox1	ENSMUST00000098763.2|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
