mm10_v2_chr8_-_33747724_33747781	2.33298	Hoxa10	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr12_-_72917872_72917942	1.73139	Hoxa10	ENSMUST00000044000.5|4930447C04Rik|ENSMUSG00000021098.8|RIKEN cDNA 4930447C04 gene
mm10_v2_chr2_-_51149100_51149115	1.46578	Hoxa10	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr9_-_44251464_44251491	1.42993	Hoxa10	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr3_+_94398517_94398538	1.40153	Hoxa10	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr2_-_110950923_110950923	1.37048	Hoxa10	ENSMUST00000099623.3|Ano3|ENSMUSG00000074968.5|anoctamin 3
mm10_v2_chr15_+_62039216_62039262	1.1029	Hoxa10	ENSMUST00000183297.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr14_+_115042752_115042879	1.09307	Hoxa10	ENSMUST00000134140.2|Mir17hg|ENSMUSG00000089726.2|Mir17 host gene 1 (non-protein coding)
mm10_v2_chr19_+_38930909_38930920	1.01634	Hoxa10	ENSMUST00000025965.5|Hells|ENSMUSG00000025001.5|helicase, lymphoid specific
mm10_v2_chr2_-_42653598_42653598	1.01559	Hoxa10	ENSMUST00000052550.6|Lrp1b|ENSMUSG00000049252.11|low density lipoprotein-related protein 1B (deleted in tumors)
mm10_v2_chr1_+_74713551_74713574	0.992038	Hoxa10	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr1_+_66321708_66321719	0.855589	Hoxa10	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr9_+_108560422_108560534	0.854532	Hoxa10	ENSMUST00000081111.8|Impdh2|ENSMUSG00000062867.8|inosine 5'-phosphate dehydrogenase 2
mm10_v2_chr2_-_164638789_164638810	0.835819	Hoxa10	ENSMUST00000109336.1|Wfdc16|ENSMUSG00000070530.5|WAP four-disulfide core domain 16
mm10_v2_chrX_+_96455359_96455411	0.791422	Hoxa10	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr9_+_55326913_55326958	0.789461	Hoxa10	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr11_+_3330401_3330541	0.781173	Hoxa10	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_+_31759993_31760173	0.745114	Hoxa10	ENSMUST00000124089.1|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr3_-_94436574_94436616	0.723959	Hoxa10	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chr18_+_37411674_37411674	0.720161	Hoxa10	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr19_+_30232921_30232940	0.673886	Hoxa10	ENSMUST00000025797.5|Mbl2|ENSMUSG00000024863.5|mannose-binding lectin (protein C) 2
mm10_v2_chr9_+_53771499_53771535	0.626693	Hoxa10	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr2_+_15049395_15049447	0.618764	Hoxa10	ENSMUST00000017562.6|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr13_+_44840686_44840697	0.615662	Hoxa10	ENSMUST00000173906.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr7_-_126160992_126161013	0.585914	Hoxa10	ENSMUST00000164741.1|Xpo6|ENSMUSG00000000131.9|exportin 6
mm10_v2_chr2_+_68117713_68117713	0.574186	Hoxa10	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr19_+_43440404_43440447	0.571031	Hoxa10	ENSMUST00000165311.1|Cnnm1|ENSMUSG00000025189.8|cyclin M1
mm10_v2_chr4_-_91376433_91376477	0.568045	Hoxa10	ENSMUST00000107109.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107111.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107120.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr9_+_35669624_35669678	0.549373	Hoxa10	ENSMUST00000118254.1|Pate2|ENSMUSG00000074452.6|prostate and testis expressed 2
mm10_v2_chr8_+_71597648_71597675	0.531855	Hoxa10	ENSMUST00000143662.1|Fam129c|ENSMUSG00000043243.9|family with sequence similarity 129, member C
mm10_v2_chr2_-_73452666_73452712	0.530848	Hoxa10	ENSMUST00000151939.1|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr5_+_105415738_105415849	0.530637	Hoxa10	ENSMUST00000112707.1|Lrrc8b|ENSMUSG00000070639.4|leucine rich repeat containing 8 family, member B
mm10_v2_chr8_+_46492789_46492832	0.51488	Hoxa10	ENSMUST00000110371.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr11_+_44617310_44617336	0.512662	Hoxa10	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr5_-_123666682_123666695	0.502143	Hoxa10	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr1_+_40515362_40515431	0.48927	Hoxa10	ENSMUST00000027237.5|Il18rap|ENSMUSG00000026068.5|interleukin 18 receptor accessory protein
mm10_v2_chr11_+_87582201_87582215	0.469531	Hoxa10	ENSMUST00000133202.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr15_+_3270767_3271006	0.437347	Hoxa10	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr10_-_51631458_51631458	0.412977	Hoxa10	ENSMUST00000020062.3|Gprc6a|ENSMUSG00000019905.7|G protein-coupled receptor, family C, group 6, member A
mm10_v2_chr2_+_102658640_102658669	0.407713	Hoxa10	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr18_-_12860197_12860251	0.397965	Hoxa10	ENSMUST00000124570.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chr13_-_99516537_99516602	0.393688	Hoxa10	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr8_+_85432686_85432686	0.384854	Hoxa10	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr17_+_29093763_29093781	0.38476	Hoxa10	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr18_+_60774675_60774686	0.382165	Hoxa10	ENSMUST00000118551.1|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr13_+_58281183_58281196	0.380376	Hoxa10	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr1_+_59684949_59685023	0.364469	Hoxa10	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr11_-_107348130_107348179	0.362206	Hoxa10	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr14_-_54686060_54686167	0.35868	Hoxa10	ENSMUST00000125265.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1
mm10_v2_chr2_-_79908428_79908438	0.344294	Hoxa10	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr4_-_82850721_82850814	0.335908	Hoxa10	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr12_+_84361968_84362018	0.333715	Hoxa10	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr11_+_85312164_85312180	0.329557	Hoxa10	ENSMUST00000127717.1|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr2_-_34755229_34755252	0.329454	Hoxa10	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr3_+_102010138_102010171	0.319754	Hoxa10	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr16_+_38362205_38362230	0.316941	Hoxa10	ENSMUST00000023494.6|Popdc2|ENSMUSG00000022803.6|popeye domain containing 2
mm10_v2_chr6_+_90178716_90178716	0.312311	Hoxa10	ENSMUST00000079832.2|Vmn1r52|ENSMUSG00000060816.2|vomeronasal 1 receptor 52
mm10_v2_chr14_-_89898466_89898466	0.306827	Hoxa10	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chr6_+_24528144_24528200	0.306778	Hoxa10	ENSMUST00000031696.3|Asb15|ENSMUSG00000029685.9|ankyrin repeat and SOCS box-containing 15
mm10_v2_chr2_-_77946331_77946373	0.300589	Hoxa10	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr10_-_111997204_111997279	0.299063	Hoxa10	ENSMUST00000074805.5|Glipr1|ENSMUSG00000056888.5|GLI pathogenesis-related 1 (glioma)
mm10_v2_chr2_+_83812567_83812643	0.298988	Hoxa10	ENSMUST00000051454.3|Fam171b|ENSMUSG00000048388.3|family with sequence similarity 171, member B
mm10_v2_chr6_-_3494587_3494598	0.289929	Hoxa10	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr11_+_78920787_78920834	0.28661	Hoxa10	ENSMUST00000018610.6|Nos2|ENSMUSG00000020826.6|nitric oxide synthase 2, inducible
mm10_v2_chr16_+_56477838_56477860	0.281462	Hoxa10	ENSMUST00000048471.7|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000096013.3|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000096012.3|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000171000.1|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein
mm10_v2_chr13_-_74376566_74376566	0.279169	Hoxa10	ENSMUST00000091481.2|Zfp72|ENSMUSG00000069184.2|zinc finger protein 72
mm10_v2_chr1_+_107361929_107361929	0.273051	Hoxa10	ENSMUST00000027566.2|Serpinb11|ENSMUSG00000026327.2|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm10_v2_chr18_+_60774510_60774625	0.267486	Hoxa10	ENSMUST00000025511.3|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr3_+_26331150_26331150	0.265246	Hoxa10	ENSMUST00000099182.2|A830092H15Rik|ENSMUSG00000074664.2|RIKEN cDNA A830092H15 gene
mm10_v2_chr8_+_110618577_110618638	0.26387	Hoxa10	ENSMUST00000034190.9|Vac14|ENSMUSG00000010936.10|Vac14 homolog (S. cerevisiae)
mm10_v2_chrX_-_57281591_57281596	0.261493	Hoxa10	ENSMUST00000114735.2|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm10_v2_chr16_+_38362234_38362251	0.261249	Hoxa10	ENSMUST00000114739.1|Popdc2|ENSMUSG00000022803.6|popeye domain containing 2
mm10_v2_chr16_+_44394771_44394804	0.260001	Hoxa10	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chr3_+_66985680_66985692	0.253419	Hoxa10	ENSMUST00000065047.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr2_-_77946375_77946392	0.253335	Hoxa10	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr9_-_86464944_86464958	0.248781	Hoxa10	ENSMUST00000034986.7|Ube2cbp|ENSMUSG00000032415.8|ubiquitin-conjugating enzyme E2C binding protein
mm10_v2_chr12_-_69198419_69198429	0.244576	Hoxa10	ENSMUST00000021356.5|Dnaaf2|ENSMUSG00000020973.7|dynein, axonemal assembly factor 2
mm10_v2_chr17_+_6079928_6079939	0.239373	Hoxa10	ENSMUST00000100955.2|Gtf2h5|ENSMUSG00000034345.8|general transcription factor IIH, polypeptide 5
mm10_v2_chrX_-_136741155_136741352	0.235724	Hoxa10	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr15_+_59374198_59374279	0.235439	Hoxa10	ENSMUST00000079703.3|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae) 	ENSMUST00000168722.1|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm10_v2_chr6_-_99028874_99028942	0.234235	Hoxa10	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr5_-_87092546_87092563	0.228031	Hoxa10	ENSMUST00000132667.1|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36 	ENSMUST00000145617.1|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36 	ENSMUST00000094649.4|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36
mm10_v2_chr2_-_79908389_79908403	0.226107	Hoxa10	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr17_-_81649607_81649607	0.223317	Hoxa10	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr10_-_29144194_29144194	0.219537	Hoxa10	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr4_+_43406435_43406615	0.219327	Hoxa10	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr13_+_23581563_23581598	0.219003	Hoxa10	ENSMUST00000102968.1|Hist1h4d|ENSMUSG00000061482.6|histone cluster 1, H4d
mm10_v2_chr10_-_127030789_127030812	0.213011	Hoxa10	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr17_-_25844417_25844428	0.209615	Hoxa10	ENSMUST00000176591.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr9_-_50739365_50739517	0.208813	Hoxa10	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr5_+_64160207_64160220	0.203262	Hoxa10	ENSMUST00000101195.2|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr17_+_6079786_6079892	0.198851	Hoxa10	ENSMUST00000039487.3|Gtf2h5|ENSMUSG00000034345.8|general transcription factor IIH, polypeptide 5
mm10_v2_chr6_-_24528013_24528034	0.196888	Hoxa10	ENSMUST00000023851.5|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr9_-_51328898_51328923	0.188302	Hoxa10	ENSMUST00000039959.4|1810046K07Rik|ENSMUSG00000036027.5|RIKEN cDNA 1810046K07 gene
mm10_v2_chr13_+_109926832_109926881	0.179521	Hoxa10	ENSMUST00000117420.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr10_-_58675631_58675654	0.17855	Hoxa10	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr13_+_18717289_18717316	0.178548	Hoxa10	ENSMUST00000072961.4|Vps41|ENSMUSG00000041236.7|vacuolar protein sorting 41 (yeast)
mm10_v2_chr1_+_127729405_127729418	0.174702	Hoxa10	ENSMUST00000038006.6|Acmsd|ENSMUSG00000026348.6|amino carboxymuconate semialdehyde decarboxylase
mm10_v2_chr5_+_121802230_121802230	0.173642	Hoxa10	ENSMUST00000162995.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr3_-_57301919_57301956	0.171909	Hoxa10	ENSMUST00000029376.8|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr17_-_6079693_6079760	0.16687	Hoxa10	ENSMUST00000024570.5|Serac1|ENSMUSG00000015659.6|serine active site containing 1 	ENSMUST00000097432.3|Serac1|ENSMUSG00000015659.6|serine active site containing 1
mm10_v2_chr1_-_82768449_82768465	0.165371	Hoxa10	ENSMUST00000027331.2|Tm4sf20|ENSMUSG00000026149.2|transmembrane 4 L six family member 20
mm10_v2_chrM_+_14138_14154	0.164243	Hoxa10	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr10_-_116549101_116549163	0.164145	Hoxa10	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chrX_+_139086226_139086250	0.16366	Hoxa10	ENSMUST00000033625.1|4930513O06Rik|ENSMUSG00000031270.1|RIKEN cDNA 4930513O06 gene
mm10_v2_chr8_+_93810832_93810843	0.161179	Hoxa10	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr3_-_123672321_123672400	0.159686	Hoxa10	ENSMUST00000172537.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 	ENSMUST00000029602.6|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr2_-_114201416_114201469	0.156212	Hoxa10	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr3_+_136670076_136670186	0.154954	Hoxa10	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr1_-_140183404_140183415	0.152212	Hoxa10	ENSMUST00000066859.6|Cfh|ENSMUSG00000026365.9|complement component factor h 	ENSMUST00000111976.2|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr5_+_34989473_34989549	0.149168	Hoxa10	ENSMUST00000114284.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12 	ENSMUST00000114285.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr1_-_140183283_140183332	0.146548	Hoxa10	ENSMUST00000111977.1|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr18_-_39487096_39487245	0.139121	Hoxa10	ENSMUST00000097592.2|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1 	ENSMUST00000115571.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr11_-_78984831_78984924	0.135822	Hoxa10	ENSMUST00000073001.4|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9 	ENSMUST00000108269.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr18_-_34651703_34651741	0.131265	Hoxa10	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chrX_+_166170449_166170512	0.130601	Hoxa10	ENSMUST00000130880.2|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000056410.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000096252.3|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000087169.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8
mm10_v2_chr5_+_121777929_121777929	0.129655	Hoxa10	ENSMUST00000160821.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr6_+_127453667_127453685	0.125027	Hoxa10	ENSMUST00000112193.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr11_-_78984946_78984957	0.120673	Hoxa10	ENSMUST00000108268.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr6_-_99044414_99044459	0.119543	Hoxa10	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chrM_-_14060_14074	0.113557	Hoxa10	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr8_-_54718664_54718689	0.111689	Hoxa10	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr2_+_177508570_177508570	0.10886	Hoxa10	ENSMUST00000108940.2|Gm14403|ENSMUSG00000094786.1|predicted gene 14403
mm10_v2_chrM_+_3906_3926	0.106313	Hoxa10	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr9_+_51115999_51116006	0.100632	Hoxa10	ENSMUST00000114431.2|Btg4|ENSMUSG00000032056.9|B cell translocation gene 4
mm10_v2_chr17_+_25370550_25370566	0.0988428	Hoxa10	ENSMUST00000162021.1|Tpsg1|ENSMUSG00000033200.10|tryptase gamma 1
mm10_v2_chr2_+_36230426_36230491	0.096036	Hoxa10	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr13_+_23695791_23695817	0.0939995	Hoxa10	ENSMUST00000041052.2|Hist1h1t|ENSMUSG00000036211.2|histone cluster 1, H1t
mm10_v2_chr2_-_34826071_34826087	0.0888541	Hoxa10	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr11_-_100762928_100762936	0.0828272	Hoxa10	ENSMUST00000107360.2|Hcrt|ENSMUSG00000045471.4|hypocretin 	ENSMUST00000055083.3|Hcrt|ENSMUSG00000045471.4|hypocretin
mm10_v2_chr1_+_58210397_58210457	0.0820428	Hoxa10	ENSMUST00000040442.5|Aox4|ENSMUSG00000038242.6|aldehyde oxidase 4
mm10_v2_chr11_+_87109221_87109239	0.0814084	Hoxa10	ENSMUST00000020794.5|Ska2|ENSMUSG00000020492.5|spindle and kinetochore associated complex subunit 2
mm10_v2_chr4_-_11981265_11981265	0.0801737	Hoxa10	ENSMUST00000098260.2|Gm10604|ENSMUSG00000073995.2|predicted gene 10604
mm10_v2_chr1_+_167618246_167618309	0.0746966	Hoxa10	ENSMUST00000111380.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr2_-_149798701_149798743	0.073464	Hoxa10	ENSMUST00000148202.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133 	ENSMUST00000139471.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133
mm10_v2_chr4_-_14796052_14796065	0.0710656	Hoxa10	ENSMUST00000108276.1|Lrrc69|ENSMUSG00000023151.3|leucine rich repeat containing 69 	ENSMUST00000023917.1|Lrrc69|ENSMUSG00000023151.3|leucine rich repeat containing 69
mm10_v2_chr10_-_19014549_19014589	0.0663382	Hoxa10	ENSMUST00000146388.1|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr2_-_174464063_174464105	0.0625236	Hoxa10	ENSMUST00000016396.7|Atp5e|ENSMUSG00000016252.7|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm10_v2_chr9_+_62342449_62342473	0.0612586	Hoxa10	ENSMUST00000156461.1|Anp32a|ENSMUSG00000032249.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm10_v2_chr2_-_34826187_34826240	0.0598852	Hoxa10	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr6_+_54264839_54264863	0.0595424	Hoxa10	ENSMUST00000146114.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr17_+_88626569_88626609	0.0545436	Hoxa10	ENSMUST00000150023.1|Ston1|ENSMUSG00000033855.9|stonin 1
mm10_v2_chr17_+_88626549_88626566	0.0513591	Hoxa10	ENSMUST00000163588.1|Ston1|ENSMUSG00000033855.9|stonin 1 	ENSMUST00000064035.6|Ston1|ENSMUSG00000033855.9|stonin 1
mm10_v2_chr8_+_58912257_58912257	0.0491068	Hoxa10	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr11_+_52004340_52004366	0.0479466	Hoxa10	ENSMUST00000109076.1|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3
mm10_v2_chr3_-_137552622_137552665	0.0470962	Hoxa10	ENSMUST00000068546.5|Gm4861|ENSMUSG00000055138.5|predicted gene 4861
mm10_v2_chr5_-_151586924_151586924	0.046081	Hoxa10	ENSMUST00000165928.1|Vmn2r18|ENSMUSG00000091794.1|vomeronasal 2, receptor 18
mm10_v2_chr2_-_172454742_172454742	0.0445073	Hoxa10	ENSMUST00000161334.1|Gcnt7|ENSMUSG00000074569.4|glucosaminyl (N-acetyl) transferase family member 7
mm10_v2_chr6_-_83677807_83677857	0.041439	Hoxa10	ENSMUST00000037882.6|Cd207|ENSMUSG00000034783.6|CD207 antigen
mm10_v2_chr1_-_156939626_156939657	0.0394282	Hoxa10	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr5_+_24394388_24394430	0.038557	Hoxa10	ENSMUST00000115074.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm10_v2_chr19_+_39060998_39061015	0.0384666	Hoxa10	ENSMUST00000087236.4|Cyp2c65|ENSMUSG00000067231.4|cytochrome P450, family 2, subfamily c, polypeptide 65
mm10_v2_chr7_-_144470714_144470770	0.0338473	Hoxa10	ENSMUST00000033407.6|Cttn|ENSMUSG00000031078.9|cortactin
mm10_v2_chr5_-_118244861_118245116	0.0338314	Hoxa10	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr2_+_31759932_31759989	0.0333936	Hoxa10	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr13_-_60897439_60897455	0.0313255	Hoxa10	ENSMUST00000171347.1|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta 	ENSMUST00000021884.8|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta
mm10_v2_chr6_+_36388055_36388084	0.0285748	Hoxa10	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr2_-_73625731_73625744	0.0275857	Hoxa10	ENSMUST00000070579.6|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr11_-_110168073_110168196	0.0262978	Hoxa10	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr7_-_29125142_29125160	0.0241276	Hoxa10	ENSMUST00000179893.1|Ryr1|ENSMUSG00000030592.10|ryanodine receptor 1, skeletal muscle 	ENSMUST00000032813.9|Ryr1|ENSMUSG00000030592.10|ryanodine receptor 1, skeletal muscle
mm10_v2_chr9_-_100506844_100506856	0.0238817	Hoxa10	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr11_-_42000284_42000356	0.0212777	Hoxa10	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr8_+_83666827_83666882	0.0178826	Hoxa10	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr12_-_76246736_76246755	0.0164602	Hoxa10	ENSMUST00000021453.4|Tex21|ENSMUSG00000021056.7|testis expressed gene 21
mm10_v2_chr9_+_13765970_13766043	0.0162499	Hoxa10	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr6_+_34354119_34354151	0.0157607	Hoxa10	ENSMUST00000038406.6|Akr1b8|ENSMUSG00000029762.6|aldo-keto reductase family 1, member B8
mm10_v2_chr5_-_145469723_145469723	0.00933284	Hoxa10	ENSMUST00000031633.4|Cyp3a16|ENSMUSG00000038656.5|cytochrome P450, family 3, subfamily a, polypeptide 16
mm10_v2_chr3_-_30509681_30509746	0.00436364	Hoxa10	ENSMUST00000173495.1|Mecom|ENSMUSG00000027684.10|MDS1 and EVI1 complex locus
mm10_v2_chr4_+_115057683_115057811	0.00387535	Hoxa10	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr10_-_29362012_29362029	0.00189464	Hoxa10	ENSMUST00000161508.1|Rnf146|ENSMUSG00000038876.5|ring finger protein 146
mm10_v2_chr19_+_39113898_39113916	0.000760588	Hoxa10	ENSMUST00000087234.2|Cyp2c66|ENSMUSG00000067229.3|cytochrome P450, family 2, subfamily c, polypeptide 66
mm10_v2_chr6_+_52177498_52177498	0.000565396	Hoxa10	ENSMUST00000070587.3|5730596B20Rik|ENSMUSG00000056468.3|RIKEN cDNA 5730596B20 gene
